Executing: uname -s stdout: Darwin ================================================================================ ================================================================================ Starting configure run at Fri, 08 Apr 2022 13:13:31 +0100 Configure Options: --configModules=PETSc.Configure --optionsModule=config.compilerOptions --with-cc=gcc --with-cxx=0 --with-petsc4py=1 --with-fc=gfortran --download-mpich --download-fblaslapack --with-debugging=1 --with-shared-libraries=1 Working directory: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc Machine platform: uname_result(system='Darwin', node='Veronikas-Air', release='20.6.0', version='Darwin Kernel Version 20.6.0: Wed Jun 23 00:26:27 PDT 2021; root:xnu-7195.141.2~5/RELEASE_ARM64_T8101', machine='arm64') Python version: 3.9.12 (main, Mar 26 2022, 15:45:34) [Clang 13.0.0 (clang-1300.0.29.30)] ================================================================================ Environmental variables NVM_RC_VERSION= MANPATH=/opt/homebrew/share/man:: TERM_PROGRAM=Apple_Terminal NVM_CD_FLAGS=-q PIP_PYTHON_PATH=/opt/homebrew/opt/python@3.9/bin/python3.9 SHELL=/bin/zsh TERM=xterm-256color PETSC_ARCH=arch-darwin-c-debug HOMEBREW_REPOSITORY=/opt/homebrew TMPDIR=/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/ TERM_PROGRAM_VERSION=440 TERM_SESSION_ID=478C5A76-26CF-4E2F-BADC-7011D02FA2FA ZSH=/Users/veronikaulanova/.oh-my-zsh NVM_DIR=/Users/veronikaulanova/.nvm USER=veronikaulanova SSH_AUTH_SOCK=/private/tmp/com.apple.launchd.qy7nEvOeXV/Listeners __CF_USER_TEXT_ENCODING=0x1F5:0x0:0x2 PYENV_VIRTUALENV_INIT=1 PAGER=less LSCOLORS=Gxfxcxdxbxegedabagacad PIPENV_ACTIVE=1 PATH=/opt/homebrew/Cellar/pyenv-virtualenv/1.1.5/shims:/usr/local/share/python:/opt/homebrew/bin:/usr/local/bin:/usr/bin:/bin:/usr/sbin:/sbin:/Library/TeX/texbin LaunchInstanceID=E6E0262C-B4E6-44EE-9665-0DBA57EA0186 __CFBundleIdentifier=com.apple.Terminal PWD=/Users/veronikaulanova/Documents/documents/Oxford_work/petsc LANG=en_US.UTF-8 XPC_FLAGS=0x0 PYTHONDONTWRITEBYTECODE=1 XPC_SERVICE_NAME=0 PYENV_SHELL=zsh SHLVL=2 HOME=/Users/veronikaulanova HOMEBREW_PREFIX=/opt/homebrew PYTHONPATH=/Users/veronikaulanova/.local/share/virtualenvs/Oxford_work-5mk6j8NB/lib/python3.9/site-packages LESS=-R LOGNAME=veronikaulanova PIP_DISABLE_PIP_VERSION_CHECK=1 INFOPATH=/opt/homebrew/share/info: HOMEBREW_CELLAR=/opt/homebrew/Cellar PETSC_DIR=/Users/veronikaulanova/Documents/documents/Oxford_work/petsc SECURITYSESSIONID=186b8 Files in path provided by default path /opt/homebrew/Cellar/pyenv-virtualenv/1.1.5/shims: deactivate activate Warning accessing /usr/local/share/python gives errors: [Errno 2] No such file or directory: '/usr/local/share/python' /opt/homebrew/bin: lzmainfo yarnpkg gcc-ranlib-11 unzstd pyenv pip3.9 pyenv-virtualenv-init pkg-config hwloc-compress-dir mpif90 hwloc-bind pzstd hydra_pmi_proxy lto-dump-11 xzdec wheel3 virtualenv-clone pyenv-install mpirun pyenv-virtualenv-delete autoscan gfortran 2to3 python3 zstdless gcov-dump-11 mpiexec.hydra c++-11 gfortran-11 unxz hwloc-distrib virtualenvwrapper_lazy.sh pip3 autom4te rustup-init lstopo aarch64-apple-darwin20-g++-11 xzegrep cpp-11 unlzma pyenv-activate aarch64-apple-darwin20-gfortran-11 hwloc-calc pyenv-virtualenv-prefix pyenv-uninstall xzfgrep hwloc-info gdbm_dump gcov-tool-11 brew aarch64-apple-darwin20-gcc-ranlib-11 mpivars virtualenvwrapper.sh autoupdate aarch64-apple-darwin20-gcc-11 mpif77 zstdgrep idle3 expo yarn python3.9-config xz pyenv-virtualenvs python3.9 mpichversion hwloc-ls mpicc python3-config netlify pip python-build ntl gcc-11 hwloc-patch lzless gcc-ar-11 parkill xzless g++-11 zstd lzcmp pydoc3.9 xzcat autoreconf pyenv-deactivate mpicxx autoconf zstdcat autoheader xzcmp pyenv-sh-deactivate lzcat expo-cli gcc-nm-11 hwloc-diff lstopo-no-graphics hwloc-ps zstdmt lzdiff idle3.9 gdbmtool pyenv-virtualenv aarch64-apple-darwin20-gcc-nm-11 ifnames lzmadec serve aarch64-apple-darwin20-gcc-ar-11 lzgrep lzmore hydra_persist mpiexec aarch64-apple-darwin20-c++-11 virtualenv gcov-11 lzfgrep xzmore 2to3-3.9 mpic++ xzgrep mpifort pydoc3 pyenv-sh-activate hydra_nameserver pbr lzma gdbm_load lzegrep xzdiff hwloc-annotate .keepme aarch64-apple-darwin20-gcc-tmp /usr/local/bin: dvipdf ps2ps zsh-5.8.1 gs-noX11 gs apm atom ps2pdfwr ps2pdf12 gsdj pdf2dsc ps2pdf14 brew gsnd ps2pdf13 code gs-X11 pphs gsdj500 ps2ascii ps2pdf pf2afm pfbtopfa gslp printafm ps2ps2 pcretest gslj ps2epsi gsbj unix-lpr.sh pcre-config pdf2ps node eps2eps lprsetup.sh zsh npx npm pcregrep .keepme /usr/bin: ptargrep5.30 uux cpan BuildStrings loads.d htmltree5.30 write lwp-mirror5.30 indent bzip2recover hdiutil top javah tee tidy_changelog binhex5.18.pl xip yapp wsimport bzfgrep qlmanage snmptranslate split chsh stty.pl xml2man pl2pm5.30 iprofiler man lpoptions tabs smtpd2.7.py rview lsvfs zgrep dbiprof zmore cpanp-run-perl pod2usage5.30 gcov package-stash-conflicts5.30 dbiprof5.30 vim idle2.7 mandoc_soelim macerror5.18 xjc lwp-request5.18 bzmore package-stash-conflicts cancel apply bzgrep umask g++ libtool pre-grohtml colcrt findrule5.30 phpize ptar5.30 unalias h2xs5.30 mp2bug groff mkfifo toe hexdump spfd5.18 idle crc325.18 Rez cap_mkdb ictool cmp syscallbypid.d snmpset locate trustcachectl afconvert afclip tidy_changelog5.30 bzegrep neqn instmodsh extcheck javapackager pl compress corelist5.18 fddist db_upgrade diagnose-fu yamlpp-load-dump ctags iptab5.18 zdiff yamlpp-parse-emit pathchk mesg setregion perlivp yamlpp-highlight5.30 xpath5.30 c++ pod2readme pp vi iofileb.d errinfo zipgrep pod2usage alias wait safaridriver bzdiff unpack200 corelist expand strings appletviewer idlj wall brctl gm4 db_hotbackup auvaltool applesingle scandeps5.30.pl clang ibtool tty demandoc git-receive-pack infotocap pkill pwhich5.18 cups-config basename nclist objdump install native2ascii c99 desdp binhex lsmp xmllint texi2pdf yamlpp-highlight last vm_stat syslog spfquery5.18 net-snmp-cert treereg5.30 nslookup prove5.18 vimdiff topsyscall 2to3-2.7 libnetcfg cpan5.30 c++filt avbdiagnose nice perlivp5.18 xcscontrol calendar locale strip symbolscache tfmtodit trace tops lprm tiffutil du diff3 cupstestppd json_pp5.30 sw_vers fs_usage host jarsigner app-sso grolbp nscurl logger caffeinate pod2html5.30 say net-snmp-create-v3-user lwp-download5.18 plutil python3 avbutil xcode-select libnetcfg5.30 powermetrics moose-outdated c2ph net-server cvmkdir ldapmodify iofile.d join SafeEjectGPU snmpdelta ssh-keyscan phar.phar renice xxd scandeps.pl nettop ppdmerge snmpconf xsltproc osascript troff iotop mmroff lex encguess ctf_insert csplit splain5.30 iconv captoinfo snmpinform lsbom pbcopy sort xpath snmpdf whoami sc_usage jot ocspcheck mkbom groffer ldapurl json_xs pkgbuild yamlpp-events cpuwalk.d cvmkfile update_dyld_shared_cache easy_install pydoc ldapmodrdn systemextensionsctl file db_printlog sourcekit-lsp python debinhex5.30.pl hash bc fontrestore mg python2 sfltool less pod2latex bunzip2 pythonw touch rmic dispqlen.d db_archive refer getopt instmodsh5.30 krb5-config security hiutil ip2cc5.30 pip3 enc2xs5.18 lastwords rmid podchecker5.18 sed ld dbilogstrip5.30 awk ip2cc syscallbyproc.d snmpstatus uudecode psm UnRezWack fmt perlthanks5.18 zless xslt-config sdef pod2man5.18 ncctl jmc pod2text bashbug mail yamlpp-parse-emit5.30 chpass sips xcrun bzcmp lldb python2.7-config chfn ipcount newaliases nano eyapp5.18 pfbtops lam pod2readme5.30 ipptool irb ptardiff bzless sysdiagnose logname tset chgrp cu grops printenv yamlpp-load-dump5.30 unvis grotty shasum5.30 atq seq fc AssetCacheManagerUtil colldef net-server5.30 jdb perl5.30 wish uname hpmdiagnose timer_analyser.d jstack parl unzip stty5.18.pl db_stat rmiregistry json_pp test-yaml ptardiff5.30 zprint kinit mib2c od bsdtar perl findrule tbtdiagnose mcxquery lwp-download ppdpo crontab reset kextutil par5.30.pl bzcat dbicadmin ex perlbug zipdetails5.18 jvisualvm footprint lsappinfo eqn db_load fwkdp piconv read ipcount5.18 perlbug5.18 snmpusm piconv5.18 execsnoop pagesize lp base64 ptargrep jar h2ph readlink opensnoop rake rvim jcmd dmc vimtutor phar perldoc5.30 xgettext5.30.pl from prove newproc.d gencat mdutil znew podchecker mcxrefresh colrm dbilogstrip pagestuff crlrefresh headerdoc2html lwp-dump5.18 tbl jrunscript find2perl filtercalltree afhash sandbox-exec snmpvacm stapler fwkpfv sftp wc jps rsync osacompile yamlpp-load5.30 hdxml2manxml gzcat dbiproxy5.18 delv thermal pico podselect5.18 IOMFB_FDR_Loader pydoc2.7 shasum comm resolveLinks dbicadmin5.30 lpq java bundle gzip yamlpp-events5.30 zipcloak git-upload-archive xml2-config encode_keychange traptoemail gcc smbutil diff ri pythonw2.7 agvtool cksum indxbib segedit zipnote ptar printf soelim AssetCacheTetheratorUtil column ldapexop ippfind syscallbysysc.d groups dwarfdump ppdc rs spfd config_data slogin latency lsm h2ph5.30 xar db_codegen dns-sd tab2space avconvert xsubpp5.30 jhsdb unzipsfx treereg parl5.30 csreq whatis gperf php iconutil zipsplit lwp-dump pathopens.d xattr-2.7 tail whois nsupdate crc32 ldapdelete grep moose-outdated5.30 pstopdf rwbytype.d script pod2text5.30 vtool more ldapwhoami pl2pm h2ph5.18 ncinit tkmib cal afplay 2to3- addftinfo time ssh-agent afktool gcore pwhich javap xed uuname javaws texindex env pr head python-config xsubpp5.18 dsymutil clear manpath apropos units redo_prebinding info curl-config kgetcred rev SplitForks uniq tclsh binhex5.30.pl productsign mklocale pod2text5.18 defaults tic zip uulog atrm curl wdutil agentxtrap db_verify servertool newgrp timerfires rpcgen swcutil perlthanks post-grohtml moose-outdated5.18 parldyn5.30 snmpnetstat lastcomm getconf kpasswd vis dbiproxy instruments hpftodit ipcrm pic bputil net-snmp-config cpanp otool format-sql lwp-dump5.30 killall patch gdiffmk tailspin su ul compression_tool dbiproxy5.30 tkcon ssh podselect5.30 kdestroy yapp5.30 snmpgetnext type scandeps5.18.pl cpan2dist msgs xsubpp jhat CpMac tidy tftp easy_install-2.7 assetutil AssetCacheLocatorUtil orbd usbcfwflasher dbicadmin5.18 ktrace DeRez textutil xgettext.pl automator wsgen stat perldoc javac xcsdiagnose mdfind grodvi mdls codesign_allocate lookbib mddiagnose snmpbulkwalk keytool fileproviderctl binhex.pl dtruss dserr tiff2icns mandoc pbpaste policytool actool heap sum lskq macbinary ncdestroy nc snmptrap tsort uuencode cpp swift batch sqlite3 make dig ptardiff5.18 zipdetails5.30 macerror infocmp apt trimforce nm flex++ osadecompile IOAccelMemory config_data5.30 ssh-add machine wish8.5 screen snmpget piconv5.30 pcsctest codesign atos llvm-gcc mailq arch ssh-keygen snmptable kill.d ditto getopts users snmpbulkget ipcount5.30 sdp perlbug5.30 showmount taskinfo ar perldoc5.18 who mktemp unifdef yaa cut imptrace pack200 ippeveprinter hdid dc biff mailx odutil jsadebugd xargs tkpp texi2dvi debinhex5.18.pl priclass.d topsysproc nl podchecker5.30 dbilogstrip5.18 view jjs spfquery sample bg lipo seeksize.d eyapp clang++ setuids.d aa shlock symbols perlthanks5.30 pod2man5.30 afmtodit gzexe mkdep json_xs5.30 genstrings at what sdx m4 asa iptab format-sql5.18 swiftc nfsstat eyapp5.30 uupick ipcs pod2readme5.18 pluginkit as MvMac net-server5.18 fold gnumake perl5.18 log tmutil checknr certtool python2.7 vmmap shasum5.18 h2xs csrutil shar ldappasswd lkbib ResMerger bitesize.d db_checkpoint funzip power_report.sh iosnoop atsutil osalang dirname pod2man enc2xs moo-outdated iopending infokey ncal chflags fg rwbypid.d jmap dscl leaks splain5.18 nbdst mnthome jshell dsexport mdimport parldyn id procsystime cd quota uuto fuser dsimport git-shell ldapsearch command snmp-bridge-mib egrep notifyutil cc dsmemberutil podselect grn psed whereis tccutil a2p find jstat zcat ip2cc5.18 unifdefall jlink enc2xs5.30 nroff pridist.d size timesyncanalyse uttype uustat snmpwalk llvm-g++ scp instmodsh5.18 tnameserv true afinfo hidutil ldapadd pwpolicy profiles yacc kswitch xcodebuild tkpp5.30 test-yaml5.30 jobs c89 sudo update_mcdp29xx bioutil tmdiagnose plockstat xgettext5.18.pl serialver afida pgrep yes lessecho sdiff afscexpand treereg5.18 spfquery5.30 cpan5.18 db_deadlock ldapcompare unexpand prove5.30 perlivp5.30 git-upload-pack ssh-copy-id grolj4 fixproc debinhex.pl lorder pod2html5.18 ranlib javadoc tput fgrep par.pl json_pp5.18 sigdist.d ppdhtml libnetcfg5.18 auval erb dappprof openssl yamlpp-load drutil jinfo lwp-download5.30 splain pmset xmlcatalog zcmp rwsnoop jstatd lpr layerutil snmptest mib2c-update grog creatbyproc.d pstruct fdesetup flex hostinfo jcontrol MergePef lpstat SetFile pod2html rebase tar rdoc uptime s2p pidpersec.d xpath5.18 schemagen avmediainfo corelist5.30 iptab5.30 cvcp false zegrep memory_pressure pp5.30 uncompress lwp-request ncurses5.4-config sampleproc db_recover nmedit filebyproc.d bison tclsh8.5 jdeps productbuild zipinfo diffstat login db_dump smtpd.py cpuctl cpu_profiler.d which bundler iopattern finger mig sntp klist open GetFileInfo kmutil localedef ruby stringdups htmltree ptargrep5.18 git tr lwp-mirror5.18 htmltree5.18 banner leave jconsole paste RezWack moo-outdated5.18 bzip2 pod2usage5.18 uucp passwd dbiprof5.18 package-stash-conflicts5.18 macerror5.30 uuidgen pl2pm5.18 install_name_tool cmpdylib makeinfo php-config zfgrep snfsdefrag zipdetails look findrule5.18 col dscacheutil ptar5.18 lwp-request5.30 zforce lwp-mirror malloc_history cpio nohup kcc ulimit rails bspatch RezDet hotspot.d cvaffinity gatherheaderdoc ppdi pcap-config jpackage avmetareadwrite update_dyld_shared_cache_root_mode gen_bridge_metadata gem spfd5.30 opendiff crc325.30 h2xs5.18 talk expect jimage lockstat dapptrace install-info xattr w gunzip /bin: cat echo launchctl df pwd test csh wait4path unlink sleep stty date ed expr pax bash kill sh ps link tcsh dd mkdir ksh hostname dash rmdir mv ln ls cp sync zsh chmod rm [ /usr/sbin: dsconfigad htdbm netbiosd postlock systemsoundserverd dseditgroup avbdeviced rpcinfo BootCacheControl weakpass_edit periodic accton wfsctl postalias slapacl edquota sndiskmove pdisk amt lpadmin fdisk sysadminctl networksetup envvars ktutil setquota otctl php-fpm dnctl mDNSResponder iRATBW.mlmodelc repquota cupsfilter checkgid uuconv sharing vifs ac racoon dsenableroot xsanctl kdcsetup aslmanager screencapture htdigest rtsold chat DevToolsSecurity applecamerad logresolve cvdbset KernelEventAgent gpt scutil ioreg ab traceroute6 pwd_mkdb sysctl appsleepd sshd mDNSResponderHelper authserver appleh13camerad postmulti lsof pkgutil slapindex sc_auth ioclasscount uucico firmwarepasswd rarpd tsig-keygen kadmin.local syslogd taskpolicy filecoordinationd dot_clean PasswordService systemsetup zdump snmpd ndp coreaudiod rpcbind praudit usernoted postkick postcat netstat lpc slapadd krbservicesetup slapconfig rtadvd httxt2dbm distnoted mtree cupsdisable lpmove disktool purge rpc.statd cupsctl DirectoryService notifyd klist_cdhashes dtrace kextcache cupsd dbmmanage languagesetup skywalkctl mkpassdb postconf createhomedir ocspd iostat cvdb sa rpc.lockd uuxqt mkfile softwareupdate unsetpassword zic nfs4mapid postsuper htpasswd rotatelogs universalaccessd audit httpd bluetoothaudiod slapauth slappasswd localemanager asr cvupdatefs bless cvgather xscertadmin visudo uusched dsconfigldap smbdiagnose cfprefsd auditd uuchk cvfsck kextfind diskutil cvfsid sso_util vsdbutil ddns-confgen ioalloccount uasysdiagnose dev_mkdb hdik slapdn vpnd postqueue setkey tpctl repairHomePermissions spindump cupsreject traceroute quotaoff newsyslog postfix cvfsdb snmptrapd chroot arp cupsaccept nvram chown mkextunpack postlog installer pppd httpd-wrapper system_profiler fcgistarter bluetoothd slapschema kadmin spray cvversions kextlibs tcpdump xartutil securityd nlcontrol quotaon spctl vipw gssd slaptest automount scselect envvars-std graphicssession ckksctl lpinfo smbd serverinfo cvmkfs postmap postdrop cupsenable cron systemstats bnepd kextstat snquota cvlabel sendmail systemkeychain kcditto slapcat ipconfig auditreduce cvadmin WirelessRadioManagerd apachectl htcacheclean /sbin: mount_hfs mount_apfs md5 fsck mount_udf quotacheck mount_cd9660 ping fsck_exfat mount_exfat fsck_udf shutdown route mount_webdav fsck_hfs nfsd reboot nfsiod fsck_cs fsck_apfs fstyp_msdos disklabel mount_msdos fsck_msdos ifconfig halt mount_9p mount_ntfs rtsol newfs_apfs umount fstyp kextunload mpioutil fstyp_ntfs emond mount_nfs newfs_udf mount_ftp pfctl mknod fstyp_udf dmesg mount fibreconfig fstyp_hfs newfs_hfs dynamic_pager launchd newfs_exfat apfs_unlockfv apfs_hfs_convert nologin mount_afp mount_smbfs mount_tmpfs ping6 kextload mount_cddafs mount_fdesc newfs_msdos mount_acfs mount_devfs /Library/TeX/texbin: luajittex lollipop t1disasm chktex rubikrotation lily-rebuild-pdfs weave mag man ebb prepmx mktexlsr gsftopk upmendex dvibook kpsewhere rumakeindex fontinst cef5conv lacheck httexi lily-image-commands texloganalyser dvilj patgen uptex exceltex pdvitype texconfig-sys xmltex vlna texsis dvipdft urlbst pdfcslatex afm2afm cefconv uplatex-dev sjisconv tex2xindy musixtex pdfcsplain opl2ofm de-macro bbl2bib ltx2crossrefxml pdftex r-mpost dvitodvi gftodvi dviconcat texluajitc dvipng pdflatex-dev komkindex tex sty2dtx ppltotf yplan eplain eptex lily-glyph-commands htmex texlua htxelatex xasy fmtutil-user wovp2ovf dvilualatex cefsconv context platex allec adhocfilelist kpsetool makejvf texdoctk xelatex-dev vptovf tex4ht texluajit mtxrunjit uplatex musixflx pfarrei mf latexdiff-vc ttfdump etex fig4latex bibexport ttf2tfm latexmk pmpost ctwill pst2pdf wordcount texconfig-dialog luahbtex lwarpmk dvilj2p dviinfox ttf2kotexfont ctanbib cweave bg5+latex pdfatfi ptex2pdf e2pall kpsewhich upbibtex texdiff mathspic kanji-fontmap-creator kanji-config-updmap asy typeoutfileinfo chklref upmpost pdflatex perltex mkt1font cefslatex cjk-gs-integrate chkdvifont dvitype pdfjadetex t1lint jamo-normalize fmtutil-sys wofm2opl dviasm kpsestat pdfxup makedtx pltotf mkindex dvilj6 r-pmpost xindy.mem xetex latex ps4pdf multibibliography teckit_compile ttf2afm biburl2doi getmapdl uptftopl llmk contextjit bib2gls texplate match_parens mkjobtexmf updvitomp ps2eps pkfix-helper chkweb arlatex pn2pdf pdfclose xindex clxelatex dosepsbin jadetex a2ping bibzbladd ovf2ovp mfluajit-nowin mpost texosquery-jre5 texhash convbkmk thumbpdf pkfix dvihp hbf2gf xindy.run texcount texmfstart latexrevise cefpdflatex texluac dvicopy ctie pdftex-quiet euptex pdftosrc mf-nowin ctangle omfonts t1asm mflua-nowin cluttex svn-multi mk4ht afm2tfm pdfopen fragmaster ebong ctanify pygmentex texdef luatex cslatex synctex texdirflatten gbkpdflatex xdvipdfmx sjispdflatex makeindex dviluatex mkofm dvipdfmx psbook dvispc csplain ttftotype42 mft t1rawafm fmtutil ctwill-twinx simpdftex depythontex otfinfo latexindent kanji-config-updmap-sys extconv disdvi pdvitomp dvipdfm texliveonfly allneeded htcontext t1testpage biber dv2dt xindy pdfbook2 t1unmac xelatex webquiz kpsepath diadia makeglossaries cef5pdflatex autoinst dvilualatex-dev mkpic splitindex repstopdf otangle mfplain latexfileversion latex-git-log inimf lualatex-dev latex2man ps2pk htxetex l3build hyperxmp-add-bytecount ptftopl ptex gbklatex t1binary bibtex t1dotlessj mktexpk detex htlatex odvicopy dvidvi extractres extractbb tie latexdef tlmgr arara ctan-o-mat rubibtex dvigif gftype ketcindy kpseaccess luacsplain cachepic srcredact dtxgen mmafm pktype platex-dev kpsexpand pktogf msxlint t1reencode vftovp xhlatex ht mendex make4ht ceflatex texlinks pmxchords mptopdf afm2pl mktexmf gftopk ulqda dvilj4l pooltype bg5latex bibmradd aleph wovf2ovp git-latexdiff pdfetex dvi2tty ofm2opl pslatex initex latexpand pamphletangler mkgrkindex mtxrun epsffit listings-ext.sh mktexfmt scor2prt psnup ot2kpx allcm pk2bm dvitomp texindy vpl2vpl luatools cef5latex ctwill-refsort luajithbtex bg5+pdflatex dvisvgm tex2aspc bg5conv deweb tlcockpit cfftot1 dviselect odvitype vpl2ovp otp2ocp latexdiff dt2dv bg5pdflatex mf2pt1 psresize t1mac epspdf pythontex bibtexu authorindex texosquery tlshell pdfxmltex includeres t1ascii pdflatexpicscale mfluajit axohelp tangle httex texosquery-jre8 checkcites bibtex8 dvi2fax otftotfm cefspdflatex mmpfb pfb2pfa vpe psselect latex-dev findhyph gregorio ovp2ovf utf8mex mflua purifyeps autosp bundledoc mllatex tex4ebook xdvi-xaw sjislatex rungs dvilj4 ltxfileinfo albatross texconfig updvitype ltximg updmap-user dvips convertgls2bib latex2nemeth pdfjam epstopdf outocp pedigree mkocp kpsereadlink ttf2pk tpic2pdftex kanji-config-updmap-user psjoin m-tx uppltotf texdoc bbox dvired latex-papersize makeglossaries-lite t4ht xdvi ps2frag wopl2ofm devnag ctanupload texexec listbib cllualatex lualatex pmxab jfmutil tikztosvg xml2pmx pdfmex tftopl spix mltex amstex pbibtex pstops optex mex bibdoiadd updmap dvipos luaotfload-tool epspdftk updmap-sys r-upmpost mktextfm texfot checklistings rpdfcrop a5toa4 installfont-tl pdfcrop pdfannotextractor ============================================================================================= TESTING: configureExternalPackagesDir from config.framework(config/BuildSystem/config/framework.py:1038) serialEvaluation: initial cxxDialectRanges ('c++11', 'c++17') serialEvaluation: new cxxDialectRanges ('c++11', 'c++17') child config.utilities.macosFirewall took 0.000036 seconds ============================================================================================= TESTING: configureDebuggers from config.utilities.debuggers(config/BuildSystem/config/utilities/debuggers.py:21) Find a default debugger and determine its arguments Executing: uname -s stdout: Darwin Detected Darwin/MacOSX OS Checking for program /opt/homebrew/Cellar/pyenv-virtualenv/1.1.5/shims/lldb...not found Checking for program /usr/local/share/python/lldb...not found Checking for program /opt/homebrew/bin/lldb...not found Checking for program /usr/local/bin/lldb...not found Checking for program /usr/bin/lldb...found Defined make macro "LLDB" to "/usr/bin/lldb" Defined "USE_DEBUGGER" to ""lldb"" Executing: uname -s stdout: Darwin Detected Darwin/MacOSX OS Checking for program /opt/homebrew/Cellar/pyenv-virtualenv/1.1.5/shims/dsymutil...not found Checking for program /usr/local/share/python/dsymutil...not found Checking for program /opt/homebrew/bin/dsymutil...not found Checking for program /usr/local/bin/dsymutil...not found Checking for program /usr/bin/dsymutil...found Defined make macro "DSYMUTIL" to "/usr/bin/dsymutil" Defined make macro "DSYMUTIL" to "/usr/bin/dsymutil" Executing: uname -s stdout: Darwin Detected Darwin/MacOSX OS Defined "DO_NOT_SWAP_CHILD_FOR_DEBUGGER" to "1" child config.utilities.debuggers took 0.013046 seconds ============================================================================================= TESTING: configureDirectories from PETSc.options.petscdir(config/PETSc/options/petscdir.py:22) Checks PETSC_DIR and sets if not set PETSC_VERSION_RELEASE of 1 indicates the code is from a release branch or a branch created from a release branch. Version Information: #define PETSC_VERSION_RELEASE 1 #define PETSC_VERSION_MAJOR 3 #define PETSC_VERSION_MINOR 17 #define PETSC_VERSION_SUBMINOR 0 #define PETSC_VERSION_DATE "unknown" #define PETSC_VERSION_GIT "unknown" #define PETSC_VERSION_DATE_GIT "unknown" #define PETSC_VERSION_EQ(MAJOR,MINOR,SUBMINOR) \ #define PETSC_VERSION_ PETSC_VERSION_EQ #define PETSC_VERSION_LT(MAJOR,MINOR,SUBMINOR) \ #define PETSC_VERSION_LE(MAJOR,MINOR,SUBMINOR) \ #define PETSC_VERSION_GT(MAJOR,MINOR,SUBMINOR) \ #define PETSC_VERSION_GE(MAJOR,MINOR,SUBMINOR) \ child PETSc.options.petscdir took 0.001369 seconds ============================================================================================= TESTING: getDatafilespath from PETSc.options.dataFilesPath(config/PETSc/options/dataFilesPath.py:29) Checks what DATAFILESPATH should be child PETSc.options.dataFilesPath took 0.000582 seconds ============================================================================================= TESTING: configureGit from config.sourceControl(config/BuildSystem/config/sourceControl.py:24) Find the Git executable Checking for program /opt/homebrew/Cellar/pyenv-virtualenv/1.1.5/shims/git...not found Checking for program /usr/local/share/python/git...not found Checking for program /opt/homebrew/bin/git...not found Checking for program /usr/local/bin/git...not found Checking for program /usr/bin/git...found Defined make macro "GIT" to "git" Executing: git --version stdout: git version 2.30.1 (Apple Git-130) ============================================================================================= TESTING: configureMercurial from config.sourceControl(config/BuildSystem/config/sourceControl.py:35) Find the Mercurial executable Checking for program /opt/homebrew/Cellar/pyenv-virtualenv/1.1.5/shims/hg...not found Checking for program /usr/local/share/python/hg...not found Checking for program /opt/homebrew/bin/hg...not found Checking for program /usr/local/bin/hg...not found Checking for program /usr/bin/hg...not found Checking for program /bin/hg...not found Checking for program /usr/sbin/hg...not found Checking for program /sbin/hg...not found Checking for program /Library/TeX/texbin/hg...not found Checking for program /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/lib/petsc/bin/win32fe/hg...not found child config.sourceControl took 0.010215 seconds ============================================================================================= TESTING: configureInstallationMethod from PETSc.options.petscclone(config/PETSc/options/petscclone.py:20) lib/petsc/bin/maint exists. This appears to be a repository clone .git directory exists Executing: ['git', 'describe', '--match=v*'] stdout: v3.17.0-41-gf475bb4cb5 Executing: ['git', 'log', '-1', '--pretty=format:%H'] stdout: f475bb4cb5a535f75e6fe2c435107a00c30d43b7 Executing: ['git', 'log', '-1', '--pretty=format:%ci'] stdout: 2022-04-08 09:03:34 +0000 Executing: ['git', 'rev-parse', '--abbrev-ref', 'HEAD'] stdout: release Defined "VERSION_GIT" to ""v3.17.0-41-gf475bb4cb5"" Defined "VERSION_DATE_GIT" to ""2022-04-08 09:03:34 +0000"" Defined "VERSION_BRANCH_GIT" to ""release"" child PETSc.options.petscclone took 0.058069 seconds ============================================================================================= TESTING: setNativeArchitecture from PETSc.options.arch(config/PETSc/options/arch.py:31) ============================================================================================= TESTING: configureArchitecture from PETSc.options.arch(config/PETSc/options/arch.py:43) Checks PETSC_ARCH and sets if not set configure hash file: arch-darwin-c-debug/lib/petsc/conf/configure-hash does not match, need to run configure Setting hashfile: arch-darwin-c-debug/lib/petsc/conf/configure-hash Deleting configure hash file: arch-darwin-c-debug/lib/petsc/conf/configure-hash Deleted configure hash file: arch-darwin-c-debug/lib/petsc/conf/configure-hash child PETSc.options.arch took 0.016812 seconds ============================================================================================= TESTING: setInstallDir from PETSc.options.installDir(config/PETSc/options/installDir.py:32) setup installDir to either prefix or if that is not set to PETSC_DIR/PETSC_ARCH Defined make macro "PREFIXDIR" to "/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug" ============================================================================================= TESTING: saveReconfigure from PETSc.options.installDir(config/PETSc/options/installDir.py:76) ============================================================================================= TESTING: cleanConfDir from PETSc.options.installDir(config/PETSc/options/installDir.py:69) ============================================================================================= TESTING: configureInstallDir from PETSc.options.installDir(config/PETSc/options/installDir.py:53) Makes installDir subdirectories if it does not exist for both prefix install location and PETSc work install location Changed persistence directory to /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/petsc/conf ============================================================================================= TESTING: restoreReconfigure from PETSc.options.installDir(config/PETSc/options/installDir.py:89) child PETSc.options.installDir took 0.000713 seconds ============================================================================================= TESTING: setExternalPackagesDir from PETSc.options.externalpackagesdir(config/PETSc/options/externalpackagesdir.py:15) ============================================================================================= TESTING: cleanExternalpackagesDir from PETSc.options.externalpackagesdir(config/PETSc/options/externalpackagesdir.py:22) child PETSc.options.externalpackagesdir took 0.000233 seconds ============================================================================================= TESTING: configureCLanguage from PETSc.options.languages(config/PETSc/options/languages.py:27) Choose whether to compile the PETSc library using a C or C++ compiler C language is C Defined "CLANGUAGE_C" to "1" Defined make macro "CLANGUAGE" to "C" child PETSc.options.languages took 0.000281 seconds ============================================================================================= TESTING: resetEnvCompilers from config.setCompilers(config/BuildSystem/config/setCompilers.py:2579) ============================================================================================= TESTING: checkEnvCompilers from config.setCompilers(config/BuildSystem/config/setCompilers.py:2595) ============================================================================================= TESTING: checkMPICompilerOverride from config.setCompilers(config/BuildSystem/config/setCompilers.py:2549) Check if --with-mpi-dir is used along with CC CXX or FC compiler options. This usually prevents mpi compilers from being used - so issue a warning ============================================================================================= TESTING: requireMpiLdPath from config.setCompilers(config/BuildSystem/config/setCompilers.py:2570) OpenMPI wrappers require LD_LIBRARY_PATH set ============================================================================================= TESTING: checkInitialFlags from config.setCompilers(config/BuildSystem/config/setCompilers.py:661) Initialize the compiler and linker flags Initialized CFLAGS to Initialized CFLAGS to Initialized LDFLAGS to Initialized CUDAFLAGS to Initialized CUDAFLAGS to Initialized LDFLAGS to Initialized HIPFLAGS to Initialized HIPFLAGS to Initialized LDFLAGS to Initialized SYCLFLAGS to Initialized SYCLFLAGS to Initialized LDFLAGS to Initialized CXXFLAGS to Initialized CXX_CXXFLAGS to Initialized LDFLAGS to Initialized FFLAGS to Initialized FFLAGS to Initialized LDFLAGS to Initialized CPPFLAGS to Initialized FPPFLAGS to Initialized CUDAPPFLAGS to -Wno-deprecated-gpu-targets Initialized CXXPPFLAGS to Initialized HIPPPFLAGS to Initialized SYCLPPFLAGS to Initialized CC_LINKER_FLAGS to [] Initialized CXX_LINKER_FLAGS to [] Initialized FC_LINKER_FLAGS to [] Initialized CUDAC_LINKER_FLAGS to [] Initialized HIPC_LINKER_FLAGS to [] Initialized SYCLC_LINKER_FLAGS to [] Initialized sharedLibraryFlags to [] Initialized dynamicLibraryFlags to [] ============================================================================================= TESTING: checkCCompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:1274) Locate a functional C compiler Checking for program /opt/homebrew/Cellar/pyenv-virtualenv/1.1.5/shims/gcc...not found Checking for program /usr/local/share/python/gcc...not found Checking for program /opt/homebrew/bin/gcc...not found Checking for program /usr/local/bin/gcc...not found Checking for program /usr/bin/gcc...found Defined make macro "CC" to "gcc" ===== Checking compiler Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } ===== Checking linker Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o ===== Checking linker Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -lpetsc-ufod4vtr9mqHvKIQiVAm Possible ERROR while running linker: exit code 1 stderr: ld: library not found for -lpetsc-ufod4vtr9mqHvKIQiVAm clang: error: linker command failed with exit code 1 (use -v to see invocation) Linker output before filtering: ld: library not found for -lpetsc-ufod4vtr9mqHvKIQiVAm clang: error: linker command failed with exit code 1 (use -v to see invocation) : Linker output after filtering: ld: library not found for -lpetsc-ufod4vtr9mqHvKIQiVAm clang: error: linker command failed with exit code 1 (use -v to see invocation): ======== Checking running linked program ===== Checking linker Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o Testing executable /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest to see if it can be run Executing: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest Running Executable with threads to time it out at 60 Executing: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest Executing: gcc --version stdout: Apple clang version 12.0.5 (clang-1205.0.22.11) Target: arm64-apple-darwin20.6.0 Thread model: posix InstalledDir: /Library/Developer/CommandLineTools/usr/bin ============================================================================================= TESTING: checkCPreprocessor from config.setCompilers(config/BuildSystem/config/setCompilers.py:1313) Locate a functional C preprocessor Checking for program /opt/homebrew/Cellar/pyenv-virtualenv/1.1.5/shims/gcc...not found Checking for program /usr/local/share/python/gcc...not found Checking for program /opt/homebrew/bin/gcc...not found Checking for program /usr/local/bin/gcc...not found Checking for program /usr/bin/gcc...found Defined make macro "CPP" to "gcc -E" Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Preprocess output before filtering: : Preprocess output after filtering: : ============================================================================================= TESTING: checkCUDACompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:1349) Locate a functional CUDA compiler Checking for program /opt/homebrew/Cellar/pyenv-virtualenv/1.1.5/shims/nvcc...not found Checking for program /usr/local/share/python/nvcc...not found Checking for program /opt/homebrew/bin/nvcc...not found Checking for program /usr/local/bin/nvcc...not found Checking for program /usr/bin/nvcc...not found Checking for program /bin/nvcc...not found Checking for program /usr/sbin/nvcc...not found Checking for program /sbin/nvcc...not found Checking for program /Library/TeX/texbin/nvcc...not found Checking for program /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/lib/petsc/bin/win32fe/nvcc...not found Checking for program /Developer/NVIDIA/CUDA-6.5/bin/nvcc...not found Checking for program /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/lib/petsc/bin/win32fe/nvcc...not found Unable to find programs: ['nvcc'] in listing of the specific search path: ['/Developer/NVIDIA/CUDA-6.5/bin'] Warning accessing /Developer/NVIDIA/CUDA-6.5/bin gives errors: [Errno 2] No such file or directory: '/Developer/NVIDIA/CUDA-6.5/bin' Checking for program /usr/local/cuda/bin/nvcc...not found Checking for program /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/lib/petsc/bin/win32fe/nvcc...not found Unable to find programs: ['nvcc'] in listing of the specific search path: ['/usr/local/cuda/bin'] Warning accessing /usr/local/cuda/bin gives errors: [Errno 2] No such file or directory: '/usr/local/cuda/bin' ============================================================================================= TESTING: checkDeviceHostCompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:685) Set the host compiler (HC) of the device compiler (DC) to the HC unless the DC already explicitly sets its HC. This may be needed if the default HC used by the DC is ancient and PETSc uses a different HC (e.g., through --with-cxx=...). ============================================================================================= TESTING: checkHIPCompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:1419) Locate a functional HIP compiler Checking for program /opt/homebrew/Cellar/pyenv-virtualenv/1.1.5/shims/hipcc...not found Checking for program /usr/local/share/python/hipcc...not found Checking for program /opt/homebrew/bin/hipcc...not found Checking for program /usr/local/bin/hipcc...not found Checking for program /usr/bin/hipcc...not found Checking for program /bin/hipcc...not found Checking for program /usr/sbin/hipcc...not found Checking for program /sbin/hipcc...not found Checking for program /Library/TeX/texbin/hipcc...not found Checking for program /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/lib/petsc/bin/win32fe/hipcc...not found Checking for program /opt/homebrew/Cellar/pyenv-virtualenv/1.1.5/shims/opt/rocm/bin/hipcc...not found Checking for program /usr/local/share/python/opt/rocm/bin/hipcc...not found Checking for program /opt/homebrew/bin/opt/rocm/bin/hipcc...not found Checking for program /usr/local/bin/opt/rocm/bin/hipcc...not found Checking for program /usr/bin/opt/rocm/bin/hipcc...not found Checking for program /bin/opt/rocm/bin/hipcc...not found Checking for program /usr/sbin/opt/rocm/bin/hipcc...not found Checking for program /sbin/opt/rocm/bin/hipcc...not found Checking for program /Library/TeX/texbin/opt/rocm/bin/hipcc...not found Checking for program /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/lib/petsc/bin/win32fe/opt/rocm/bin/hipcc...not found ============================================================================================= TESTING: checkDeviceHostCompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:685) Set the host compiler (HC) of the device compiler (DC) to the HC unless the DC already explicitly sets its HC. This may be needed if the default HC used by the DC is ancient and PETSc uses a different HC (e.g., through --with-cxx=...). ============================================================================================= TESTING: checkSYCLCompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:1489) Locate a functional SYCL compiler ============================================================================================= TESTING: checkDeviceHostCompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:685) Set the host compiler (HC) of the device compiler (DC) to the HC unless the DC already explicitly sets its HC. This may be needed if the default HC used by the DC is ancient and PETSc uses a different HC (e.g., through --with-cxx=...). ============================================================================================= TESTING: checkFortranCompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:1758) Locate a functional Fortran compiler Checking for program /opt/homebrew/Cellar/pyenv-virtualenv/1.1.5/shims/gfortran...not found Checking for program /usr/local/share/python/gfortran...not found Checking for program /opt/homebrew/bin/gfortran...found Defined make macro "FC" to "gfortran" ===== Checking compiler Executing: gfortran -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.F90 Successful compile: Source: program main end ===== Checking linker Executing: gfortran -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.F90 Successful compile: Source: program main end Executing: gfortran -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o ===== Checking linker Executing: gfortran -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.F90 Successful compile: Source: program main end Executing: gfortran -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -lpetsc-ufod4vtr9mqHvKIQiVAm Possible ERROR while running linker: exit code 1 stderr: ld: library not found for -lpetsc-ufod4vtr9mqHvKIQiVAm collect2: error: ld returned 1 exit status Linker output before filtering: ld: library not found for -lpetsc-ufod4vtr9mqHvKIQiVAm collect2: error: ld returned 1 exit status : Linker output after filtering: ld: library not found for -lpetsc-ufod4vtr9mqHvKIQiVAm collect2: error: ld returned 1 exit status: ======== Checking running linked program ===== Checking linker Executing: gfortran -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.F90 Successful compile: Source: program main end Executing: gfortran -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o Testing executable /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest to see if it can be run Executing: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest Running Executable with threads to time it out at 60 Executing: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest Executing: gfortran --version stdout: GNU Fortran (Homebrew GCC 11.2.0_3) 11.2.0 Copyright (C) 2021 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. ============================================================================================= TESTING: checkFortranPreprocessor from config.setCompilers(config/BuildSystem/config/setCompilers.py:1795) Locate a functional Fortran preprocessor Checking for program /opt/homebrew/Cellar/pyenv-virtualenv/1.1.5/shims/gfortran...not found Checking for program /usr/local/share/python/gfortran...not found Checking for program /opt/homebrew/bin/gfortran...found Defined make macro "FPP" to "gfortran -E" Preprocessing source: #define foo 10 Executing: gfortran -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.F90 Preprocess output before filtering: : Preprocess output after filtering: : ============================================================================================= TESTING: checkFortranComments from config.setCompilers(config/BuildSystem/config/setCompilers.py:1814) Make sure fortran comment "!" works ===== Checking compiler Executing: gfortran -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.F90 Successful compile: Source: program main ! comment end Fortran comments can use ! in column 1 ============================================================================================= TESTING: checkLargeFileIO from config.setCompilers(config/BuildSystem/config/setCompilers.py:1985) ============================================================================================= TESTING: checkArchiver from config.setCompilers(config/BuildSystem/config/setCompilers.py:2084) Check that the archiver exists and can make a library usable by the compiler Executing: ar -V Executing: ar -V Defined make macro "FAST_AR_FLAGS" to "Scq" ===== Checking compiler Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int foo(int a) { return a+1; } Checking for program /opt/homebrew/Cellar/pyenv-virtualenv/1.1.5/shims/ar...not found Checking for program /usr/local/share/python/ar...not found Checking for program /opt/homebrew/bin/ar...not found Checking for program /usr/local/bin/ar...not found Checking for program /usr/bin/ar...found Defined make macro "AR" to "/usr/bin/ar" Checking for program /opt/homebrew/Cellar/pyenv-virtualenv/1.1.5/shims/ranlib...not found Checking for program /usr/local/share/python/ranlib...not found Checking for program /opt/homebrew/bin/ranlib...not found Checking for program /usr/local/bin/ranlib...not found Checking for program /usr/bin/ranlib...found Defined make macro "RANLIB" to "/usr/bin/ranlib -c" Executing: /usr/bin/ar cr /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/libconf1.a /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conf1.o Executing: /usr/bin/ranlib -c /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/libconf1.a ===== Checking linker Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Possible ERROR while running compiler: stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c:6:26: warning: if statement has empty body [-Wempty-body] int b = foo(1); if (b); ^ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c:6:26: note: put the semicolon on a separate line to silence this warning 1 warning generated. Source: #include "confdefs.h" #include "conffix.h" extern int foo(int); int main() { int b = foo(1); if (b); ; return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -L/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -lconf1 Defined make macro "AR_FLAGS" to "cr" Defined make macro "AR_LIB_SUFFIX" to "a" ============================================================================================= TESTING: checkArchiverRecipeArgfile from config.setCompilers(config/BuildSystem/config/setCompilers.py:2148) Checks if AR handles @ notation Executing: /usr/bin/ar cr checkRecipeArgfile.a @checkRecipeArgfile.args Possible ERROR while running archiver: exit code 1 stderr: ar: @checkRecipeArgfile.args: No such file or directory ============================================================================================= TESTING: checkSharedLinker from config.setCompilers(config/BuildSystem/config/setCompilers.py:2230) Check that the linker can produce shared libraries Executing: uname -s stdout: Darwin Detected Darwin/MacOSX OS Checking shared linker gcc using flags ['-dynamiclib -single_module', '-undefined dynamic_lookup', '-multiply_defined suppress', '-no_compact_unwind'] Checking for program /opt/homebrew/Cellar/pyenv-virtualenv/1.1.5/shims/gcc...not found Checking for program /usr/local/share/python/gcc...not found Checking for program /opt/homebrew/bin/gcc...not found Checking for program /usr/local/bin/gcc...not found Checking for program /usr/bin/gcc...found Defined make macro "LD_SHARED" to "gcc" Executing: gcc --help | head -n 20 stdout: OVERVIEW: clang LLVM compiler USAGE: clang [options] file... OPTIONS: -### Print (but do not run) the commands to run for this compilation --analyzer-output Static analyzer report output format (html|plist|plist-multi-file|plist-html|sarif|text). --analyze Run the static analyzer -arcmt-migrate-emit-errors Emit ARC errors even if the migrator can fix them -arcmt-migrate-report-output Output path for the plist report -B Add to search path for binaries and object files used implicitly -CC Include comments from within macros in preprocessed output -cl-denorms-are-zero OpenCL only. Allow denormals to be flushed to zero. -cl-fast-relaxed-math OpenCL only. Sets -cl-finite-math-only and -cl-unsafe-math-optimizations, and defines __FAST_RELAXED_MATH__. -cl-finite-math-only OpenCL only. Allow floating-point optimizations that assume arguments and results are not NaNs or +-Inf. -cl-fp32-correctly-rounded-divide-sqrt OpenCL only. Specify that single precision floating-point divide and sqrt used in the program source are correctly rounded. Executing: gcc -qversion Executing: gcc -show Skipping checking MPI compiler command for PIC flag since MPI compiler -show causes an exception so is likely not an MPI compiler Trying C compiler flag -PIC Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -PIC /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Possible ERROR while running compiler: exit code 1 stderr: clang: error: unknown argument '-PIC'; did you mean '-fPIC'? Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Output from compiling with -PIC Rejecting compiler flag -PIC due to nonzero status from link Rejected C compiler flag -PIC because it was not compatible with shared linker gcc using flags ['-dynamiclib -single_module', '-undefined dynamic_lookup', '-multiply_defined suppress', '-no_compact_unwind'] Trying C compiler flag -qPIC Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -qPIC /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Possible ERROR while running compiler: exit code 1 stderr: clang: error: unknown argument '-qPIC'; did you mean '-fPIC'? Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Output from compiling with -qPIC Rejecting compiler flag -qPIC due to nonzero status from link Rejected C compiler flag -qPIC because it was not compatible with shared linker gcc using flags ['-dynamiclib -single_module', '-undefined dynamic_lookup', '-multiply_defined suppress', '-no_compact_unwind'] Trying C compiler flag -KPIC Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -KPIC /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Possible ERROR while running compiler: exit code 1 stderr: clang: error: unknown argument '-KPIC'; did you mean '-fPIC'? Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Output from compiling with -KPIC Rejecting compiler flag -KPIC due to nonzero status from link Rejected C compiler flag -KPIC because it was not compatible with shared linker gcc using flags ['-dynamiclib -single_module', '-undefined dynamic_lookup', '-multiply_defined suppress', '-no_compact_unwind'] Trying C compiler flag -fPIC Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -fPIC /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Output from compiling with -fPIC Added C compiler flag -fPIC Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -fPIC /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest -dynamiclib -single_module -fPIC /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o Valid C linker flag -dynamiclib -single_module Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -fPIC /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest -undefined dynamic_lookup -fPIC /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o Valid C linker flag -undefined dynamic_lookup Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -fPIC /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest -multiply_defined suppress -fPIC /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o Valid C linker flag -multiply_defined suppress Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -fPIC /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest -no_compact_unwind -fPIC /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o Possible ERROR while running linker: exit code 1 stderr: clang: error: unknown argument: '-no_compact_unwind' Rejecting linker flag -no_compact_unwind due to nonzero status from link Linker output before filtering: clang: error: unknown argument: '-no_compact_unwind' : Linker output after filtering: clang: error: unknown argument: '-no_compact_unwind': ===== Checking linker Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -fPIC /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int (*fprintf_ptr)(FILE*,const char*,...) = fprintf; void foo(void){ fprintf_ptr(stdout,"hello"); return; } void bar(void){foo();} Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/libconftest.dylib -dynamiclib -single_module -undefined dynamic_lookup -multiply_defined suppress -fPIC /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o ===== Checking linker Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -fPIC /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int foo(void); int main() { int ret = foo(); if (ret) {} ; return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest -fPIC /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -L/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -lconftest Using shared linker gcc with flags ['-dynamiclib -single_module', '-undefined dynamic_lookup', '-multiply_defined suppress'] and library extension dylib Executing: uname -s stdout: Darwin Detected Darwin/MacOSX OS ============================================================================================= TESTING: checkLinkerMac from config.setCompilers(config/BuildSystem/config/setCompilers.py:2305) Tests some Apple Mac specific linker flags Defined "PETSC_USING_DARWIN" to "1" Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -fPIC /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest -Wl,-bind_at_load -fPIC /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o Valid C linker flag -Wl,-bind_at_load Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -fPIC /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest -Wl,-multiply_defined,suppress -Wl,-bind_at_load -fPIC /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o Valid C linker flag -Wl,-multiply_defined,suppress Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -fPIC /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest -Wl,-multiply_defined -Wl,suppress -Wl,-bind_at_load -Wl,-multiply_defined,suppress -fPIC /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o Valid C linker flag -Wl,-multiply_defined -Wl,suppress Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -fPIC /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest -Wl,-commons,use_dylibs -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -fPIC /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o Valid C linker flag -Wl,-commons,use_dylibs Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -fPIC /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest -Wl,-search_paths_first -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -fPIC /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o Valid C linker flag -Wl,-search_paths_first Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -fPIC /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -fPIC /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o Valid C linker flag -Wl,-no_compact_unwind Executing: gfortran -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.F90 Successful compile: Source: program main end Executing: gfortran -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest -Wl,-bind_at_load /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o Valid FC linker flag -Wl,-bind_at_load Executing: gfortran -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.F90 Successful compile: Source: program main end Executing: gfortran -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest -Wl,-multiply_defined,suppress -Wl,-bind_at_load /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o Valid FC linker flag -Wl,-multiply_defined,suppress Executing: gfortran -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.F90 Successful compile: Source: program main end Executing: gfortran -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest -Wl,-multiply_defined -Wl,suppress -Wl,-bind_at_load -Wl,-multiply_defined,suppress /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o Valid FC linker flag -Wl,-multiply_defined -Wl,suppress Executing: gfortran -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.F90 Successful compile: Source: program main end Executing: gfortran -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest -Wl,-commons,use_dylibs -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o Valid FC linker flag -Wl,-commons,use_dylibs Executing: gfortran -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.F90 Successful compile: Source: program main end Executing: gfortran -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest -Wl,-search_paths_first -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o Valid FC linker flag -Wl,-search_paths_first Executing: gfortran -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.F90 Successful compile: Source: program main end Executing: gfortran -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o Valid FC linker flag -Wl,-no_compact_unwind Executing: uname -s stdout: Darwin ============================================================================================= TESTING: checkPIC from config.setCompilers(config/BuildSystem/config/setCompilers.py:1935) Determine the PIC option for each compiler Executing: gfortran --help | head -n 20 stdout: Usage: gfortran [options] file... Options: -pass-exit-codes Exit with highest error code from a phase. --help Display this information. --target-help Display target specific command line options. --help={common|optimizers|params|target|warnings|[^]{joined|separate|undocumented}}[,...]. Display specific types of command line options. (Use '-v --help' to display command line options of sub-processes). --version Display compiler version information. -dumpspecs Display all of the built in spec strings. -dumpversion Display the version of the compiler. -dumpmachine Display the compiler's target processor. -print-search-dirs Display the directories in the compiler's search path. -print-libgcc-file-name Display the name of the compiler's companion library. -print-file-name= Display the full path to library . -print-prog-name= Display the full path to compiler component . -print-multiarch Display the target's normalized GNU triplet, used as a component in the library path. -print-multi-directory Display the root directory for versions of libgcc. -print-multi-lib Display the mapping between command line options and Detected GNU compiler Executing: gfortran -show Skipping checking MPI compiler command for PIC flag since MPI compiler -show causes an exception so is likely not an MPI compiler Trying FC compiler flag -fPIC for PIC code Executing: gfortran -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -fPIC /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.F90 Successful compile: Source: program main end Output from compiling with -fPIC Added FC compiler flag -fPIC ===== Checking linker Executing: gfortran -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -fPIC /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.F90 Successful compile: Source: function foo(a) real:: a,x,bar common /xx/ x x=a foo = bar(x) end Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/libconftest.dylib -dynamiclib -single_module -undefined dynamic_lookup -multiply_defined suppress -fPIC /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o Possible ERROR while running linker: stderr: ld: warning: object file (/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o) was built for newer macOS version (11.5) than being linked (11.0) Linker output before filtering: ld: warning: object file (/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o) was built for newer macOS version (11.5) than being linked (11.0) : Linker output after filtering: : Accepted FC compiler flag -fPIC for PIC code ============================================================================================= TESTING: checkSharedLinkerPaths from config.setCompilers(config/BuildSystem/config/setCompilers.py:2344) Determine the shared linker path options - IRIX: -rpath - Linux, OSF: -Wl,-rpath, - Solaris: -R - FreeBSD: -Wl,-R, Executing: uname -s stdout: Darwin Detected Darwin/MacOSX OS Executing: gcc -V Trying C linker flag -Wl,-rpath, Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -fPIC /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest -Wl,-rpath,/Users/veronikaulanova/Documents/documents/Oxford_work/petsc -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o Valid C linker flag -Wl,-rpath,/Users/veronikaulanova/Documents/documents/Oxford_work/petsc Executing: uname -s stdout: Darwin Detected Darwin/MacOSX OS Executing: gcc -V Trying FC linker flag -Wl,-rpath, Executing: gfortran -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -fPIC /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.F90 Successful compile: Source: program main end Executing: gfortran -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest -Wl,-rpath,/Users/veronikaulanova/Documents/documents/Oxford_work/petsc -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o Valid FC linker flag -Wl,-rpath,/Users/veronikaulanova/Documents/documents/Oxford_work/petsc ============================================================================================= TESTING: checkLibC from config.setCompilers(config/BuildSystem/config/setCompilers.py:2383) Test whether we need to explicitly include libc in shared linking - Mac OSX requires an explicit reference to libc for shared linking ===== Checking linker Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -fPIC /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int foo(void) {void *chunk = malloc(31); free(chunk); return 0;} Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/libconftest.dylib -dynamiclib -single_module -undefined dynamic_lookup -multiply_defined suppress -fPIC /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o Shared linking does not require an explicit libc reference ============================================================================================= TESTING: checkDynamicLinker from config.setCompilers(config/BuildSystem/config/setCompilers.py:2429) Check that the linker can dynamicaly load shared libraries Checking for header: dlfcn.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Preprocess output before filtering: : Preprocess output after filtering: : Defined "HAVE_DLFCN_H" to "1" Checking for functions [dlopen dlsym dlclose] in library ['dl'] [] ===== Checking linker Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -fPIC /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dlopen(); static void _check_dlopen() { dlopen(); } char dlsym(); static void _check_dlsym() { dlsym(); } char dlclose(); static void _check_dlclose() { dlclose(); } int main() { _check_dlopen(); _check_dlsym(); _check_dlclose();; return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.o -ldl ===== Checking compiler Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -fPIC /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dlopen(); static void _check_dlopen() { dlopen(); } char dlsym(); static void _check_dlsym() { dlsym(); } char dlclose(); static void _check_dlclose() { dlclose(); } void dummy(void) {_check_dlopen(); _check_dlsym(); _check_dlclose();} ===== Checking linker Executing: gfortran -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -fPIC /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.F90 Successful compile: Source: program main print*,'testing' stop end Executing: gfortran -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/confc.o -ldl Defined "HAVE_LIBDL" to "1" Adding ['dl'] to LIBS Executing: uname -s stdout: Darwin Detected Darwin/MacOSX OS Checking dynamic linker gcc using flags ['-dynamiclib -single_module -undefined dynamic_lookup -multiply_defined suppress'] Checking for program /opt/homebrew/Cellar/pyenv-virtualenv/1.1.5/shims/gcc...not found Checking for program /usr/local/share/python/gcc...not found Checking for program /opt/homebrew/bin/gcc...not found Checking for program /usr/local/bin/gcc...not found Checking for program /usr/bin/gcc...found Defined make macro "DYNAMICLINKER" to "gcc" Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -fPIC /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest -dynamiclib -single_module -undefined dynamic_lookup -multiply_defined suppress -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -ldl Valid C linker flag -dynamiclib -single_module -undefined dynamic_lookup -multiply_defined suppress ===== Checking linker Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -fPIC /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int foo(void) {printf("test");return 0;} Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/libconftest.dylib -dynamiclib -single_module -undefined dynamic_lookup -multiply_defined suppress -fPIC /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -ldl ===== Checking linker Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -fPIC /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include int main() { void *handle = dlopen("/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/libconftest.dylib", 0); int (*foo)(void) = (int (*)(void)) dlsym(handle, "foo"); if (!foo) { printf("Could not load symbol\n"); return -1; } if ((*foo)()) { printf("Invalid return from foo()\n"); return -1; } if (dlclose(handle)) { printf("Could not close library\n"); return -1; } ; return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -ldl Using dynamic linker gcc with flags ['-dynamiclib -single_module -undefined dynamic_lookup -multiply_defined suppress'] and library extension dylib ============================================================================================= TESTING: checkPragma from config.setCompilers(config/BuildSystem/config/setCompilers.py:1894) Check for all available applicable languages whether they complain (including warnings!) about potentially unknown pragmas Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -fPIC -Wunknown-pragmas /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Output from compiling with -fPIC -Wunknown-pragmas Added C compiler flag -Wunknown-pragmas ===== Checking compiler Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -fPIC -Wunknown-pragmas /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #pragma GCC poison TEST int main() { ; return 0; } ============================================================================================= TESTING: output from config.setCompilers(config/BuildSystem/config/setCompilers.py:2478) Output module data as defines and substitutions Substituting "CC" with "gcc" Substituting "CFLAGS" with " -fPIC" Defined make macro "CC_LINKER_SLFLAG" to "-Wl,-rpath," Substituting "CPP" with "gcc -E" Substituting "CPPFLAGS" with "" Substituting "CXX" with "" Substituting "FC" with "gfortran" Substituting "FFLAGS" with " -fPIC" Defined make macro "FC_LINKER_SLFLAG" to "-Wl,-rpath," Substituting "LDFLAGS" with "" Substituting "FPP" with "gfortran -E" Substituting "FPPFLAGS" with "" Substituting "LIBS" with "-ldl " Substituting "SHARED_LIBRARY_FLAG" with "-dynamiclib -single_module -undefined dynamic_lookup -multiply_defined suppress" child config.setCompilers took 3.473667 seconds ============================================================================================= TESTING: configureIndexSize from PETSc.options.indexTypes(config/PETSc/options/indexTypes.py:39) Defined make macro "PETSC_INDEX_SIZE" to "32" child PETSc.options.indexTypes took 0.000413 seconds ============================================================================================= TESTING: configureCompilerFlags from config.compilerFlags(config/BuildSystem/config/compilerFlags.py:82) Get the default compiler flags Executing: gcc --version stdout: Apple clang version 12.0.5 (clang-1205.0.22.11) Target: arm64-apple-darwin20.6.0 Thread model: posix InstalledDir: /Library/Developer/CommandLineTools/usr/bin getCompilerVersion: gcc Apple clang version 12.0.5 (clang-1205.0.22.11) Defined make macro "C_VERSION" to "Apple clang version 12.0.5 (clang-1205.0.22.11)" Defined make macro "MPICC_SHOW" to "Unavailable" Executing: gcc --help | head -n 20 stdout: OVERVIEW: clang LLVM compiler USAGE: clang [options] file... OPTIONS: -### Print (but do not run) the commands to run for this compilation --analyzer-output Static analyzer report output format (html|plist|plist-multi-file|plist-html|sarif|text). --analyze Run the static analyzer -arcmt-migrate-emit-errors Emit ARC errors even if the migrator can fix them -arcmt-migrate-report-output Output path for the plist report -B Add to search path for binaries and object files used implicitly -CC Include comments from within macros in preprocessed output -cl-denorms-are-zero OpenCL only. Allow denormals to be flushed to zero. -cl-fast-relaxed-math OpenCL only. Sets -cl-finite-math-only and -cl-unsafe-math-optimizations, and defines __FAST_RELAXED_MATH__. -cl-finite-math-only OpenCL only. Allow floating-point optimizations that assume arguments and results are not NaNs or +-Inf. -cl-fp32-correctly-rounded-divide-sqrt OpenCL only. Specify that single precision floating-point divide and sqrt used in the program source are correctly rounded. Executing: gcc --help | head -n 500 Detected CLANG compiler Executing: gcc --version stdout: Apple clang version 12.0.5 (clang-1205.0.22.11) Target: arm64-apple-darwin20.6.0 Thread model: posix InstalledDir: /Library/Developer/CommandLineTools/usr/bin Executing: uname -s stdout: Darwin Detected Darwin/MacOSX OS Executing: gcc --help | head -n 20 stdout: OVERVIEW: clang LLVM compiler USAGE: clang [options] file... OPTIONS: -### Print (but do not run) the commands to run for this compilation --analyzer-output Static analyzer report output format (html|plist|plist-multi-file|plist-html|sarif|text). --analyze Run the static analyzer -arcmt-migrate-emit-errors Emit ARC errors even if the migrator can fix them -arcmt-migrate-report-output Output path for the plist report -B Add to search path for binaries and object files used implicitly -CC Include comments from within macros in preprocessed output -cl-denorms-are-zero OpenCL only. Allow denormals to be flushed to zero. -cl-fast-relaxed-math OpenCL only. Sets -cl-finite-math-only and -cl-unsafe-math-optimizations, and defines __FAST_RELAXED_MATH__. -cl-finite-math-only OpenCL only. Allow floating-point optimizations that assume arguments and results are not NaNs or +-Inf. -cl-fp32-correctly-rounded-divide-sqrt OpenCL only. Specify that single precision floating-point divide and sqrt used in the program source are correctly rounded. Detected Darwin/MacOSX Catalina OS Executing: gcc --help | head -n 500 Detected CLANG compiler Executing: gcc --help | head -n 500 Detected CLANG compiler Trying C compiler flag -Wall Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -fPIC -Wall /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Output from compiling with -fPIC -Wall Added C compiler flag -Wall Trying C compiler flag -Wwrite-strings Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -fPIC -Wall -Wwrite-strings /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Output from compiling with -fPIC -Wall -Wwrite-strings Added C compiler flag -Wwrite-strings Trying C compiler flag -Wno-unknown-pragmas Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Output from compiling with -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas Added C compiler flag -Wno-unknown-pragmas Trying C compiler flag -fstack-protector Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Output from compiling with -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector Added C compiler flag -fstack-protector Trying C compiler flag -fno-stack-check Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Output from compiling with -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check Added C compiler flag -fno-stack-check Trying C compiler flag -mfp16-format=ieee Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -mfp16-format=ieee /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Possible ERROR while running compiler: exit code 1 stderr: clang: error: unknown argument: '-mfp16-format=ieee' Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Output from compiling with -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -mfp16-format=ieee Rejecting compiler flag -mfp16-format=ieee due to nonzero status from link Rejected C compiler flag -mfp16-format=ieee Trying C compiler flag -Qunused-arguments Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Output from compiling with -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments Added C compiler flag -Qunused-arguments Trying C compiler flag -fvisibility=hidden Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Output from compiling with -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden Added C compiler flag -fvisibility=hidden Defined make macro "MPICC_SHOW" to "Unavailable" Executing: gcc --help | head -n 20 stdout: OVERVIEW: clang LLVM compiler USAGE: clang [options] file... OPTIONS: -### Print (but do not run) the commands to run for this compilation --analyzer-output Static analyzer report output format (html|plist|plist-multi-file|plist-html|sarif|text). --analyze Run the static analyzer -arcmt-migrate-emit-errors Emit ARC errors even if the migrator can fix them -arcmt-migrate-report-output Output path for the plist report -B Add to search path for binaries and object files used implicitly -CC Include comments from within macros in preprocessed output -cl-denorms-are-zero OpenCL only. Allow denormals to be flushed to zero. -cl-fast-relaxed-math OpenCL only. Sets -cl-finite-math-only and -cl-unsafe-math-optimizations, and defines __FAST_RELAXED_MATH__. -cl-finite-math-only OpenCL only. Allow floating-point optimizations that assume arguments and results are not NaNs or +-Inf. -cl-fp32-correctly-rounded-divide-sqrt OpenCL only. Specify that single precision floating-point divide and sqrt used in the program source are correctly rounded. Executing: gcc --help | head -n 500 Detected CLANG compiler Trying C compiler flag -g3 Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Output from compiling with -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 Added C compiler flag -g3 Trying C compiler flag -O0 Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Output from compiling with -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 Added C compiler flag -O0 Executing: gfortran --version stdout: GNU Fortran (Homebrew GCC 11.2.0_3) 11.2.0 Copyright (C) 2021 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. getCompilerVersion: gfortran GNU Fortran (Homebrew GCC 11.2.0_3) 11.2.0 Defined make macro "FC_VERSION" to "GNU Fortran (Homebrew GCC 11.2.0_3) 11.2.0" Defined make macro "MPIFC_SHOW" to "Unavailable" Executing: gfortran --help | head -n 20 stdout: Usage: gfortran [options] file... Options: -pass-exit-codes Exit with highest error code from a phase. --help Display this information. --target-help Display target specific command line options. --help={common|optimizers|params|target|warnings|[^]{joined|separate|undocumented}}[,...]. Display specific types of command line options. (Use '-v --help' to display command line options of sub-processes). --version Display compiler version information. -dumpspecs Display all of the built in spec strings. -dumpversion Display the version of the compiler. -dumpmachine Display the compiler's target processor. -print-search-dirs Display the directories in the compiler's search path. -print-libgcc-file-name Display the name of the compiler's companion library. -print-file-name= Display the full path to library . -print-prog-name= Display the full path to compiler component . -print-multiarch Display the target's normalized GNU triplet, used as a component in the library path. -print-multi-directory Display the root directory for versions of libgcc. -print-multi-lib Display the mapping between command line options and Detected GNU compiler Executing: gfortran --version stdout: GNU Fortran (Homebrew GCC 11.2.0_3) 11.2.0 Copyright (C) 2021 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. Detected GFortran46plus compiler Executing: gfortran --version stdout: GNU Fortran (Homebrew GCC 11.2.0_3) 11.2.0 Copyright (C) 2021 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. Detected GFortran47plus compiler Executing: gfortran --version stdout: GNU Fortran (Homebrew GCC 11.2.0_3) 11.2.0 Copyright (C) 2021 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. Trying FC compiler flag -Wall Executing: gfortran -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -fPIC -Wall /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.F90 Successful compile: Source: program main end Output from compiling with -fPIC -Wall Added FC compiler flag -Wall Trying FC compiler flag -ffree-line-length-0 Executing: gfortran -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -fPIC -Wall -ffree-line-length-0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.F90 Successful compile: Source: program main end Output from compiling with -fPIC -Wall -ffree-line-length-0 Added FC compiler flag -ffree-line-length-0 Trying FC compiler flag -Wno-unused-dummy-argument Executing: gfortran -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -fPIC -Wall -ffree-line-length-0 -Wno-unused-dummy-argument /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.F90 Successful compile: Source: program main end Output from compiling with -fPIC -Wall -ffree-line-length-0 -Wno-unused-dummy-argument Added FC compiler flag -Wno-unused-dummy-argument Defined make macro "MPIFC_SHOW" to "Unavailable" Executing: gfortran --help | head -n 20 stdout: Usage: gfortran [options] file... Options: -pass-exit-codes Exit with highest error code from a phase. --help Display this information. --target-help Display target specific command line options. --help={common|optimizers|params|target|warnings|[^]{joined|separate|undocumented}}[,...]. Display specific types of command line options. (Use '-v --help' to display command line options of sub-processes). --version Display compiler version information. -dumpspecs Display all of the built in spec strings. -dumpversion Display the version of the compiler. -dumpmachine Display the compiler's target processor. -print-search-dirs Display the directories in the compiler's search path. -print-libgcc-file-name Display the name of the compiler's companion library. -print-file-name= Display the full path to library . -print-prog-name= Display the full path to compiler component . -print-multiarch Display the target's normalized GNU triplet, used as a component in the library path. -print-multi-directory Display the root directory for versions of libgcc. -print-multi-lib Display the mapping between command line options and Detected GNU compiler Trying FC compiler flag -g Executing: gfortran -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -fPIC -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.F90 Successful compile: Source: program main end Output from compiling with -fPIC -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g Added FC compiler flag -g Trying FC compiler flag -O0 Executing: gfortran -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -fPIC -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.F90 Successful compile: Source: program main end Output from compiling with -fPIC -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 Added FC compiler flag -O0 ============================================================================================= TESTING: checkIntelHardwareSupport from config.compilerFlags(config/BuildSystem/config/compilerFlags.py:173) Use Linux/MacOS commands to determine what operations the hardware supports Executing: lscpu Executing: sysctl -a stdout: user.cs_path: /usr/bin:/bin:/usr/sbin:/sbin user.bc_base_max: 99 user.bc_dim_max: 2048 user.bc_scale_max: 99 user.bc_string_max: 1000 user.coll_weights_max: 2 user.expr_nest_max: 32 user.line_max: 2048 user.re_dup_max: 255 user.posix2_version: 200112 user.posix2_c_bind: 0 user.posix2_c_dev: 0 user.posix2_char_term: 0 user.posix2_fort_dev: 0 user.posix2_fort_run: 0 user.posix2_localedef: 0 user.posix2_sw_dev: 0 user.posix2_upe: 0 user.stream_max: 20 user.tzname_max: 255 kern.ostype: Darwin kern.osrelease: 20.6.0 kern.osrevision: 199506 kern.version: Darwin Kernel Version 20.6.0: Wed Jun 23 00:26:27 PDT 2021; root:xnu-7195.141.2~5/RELEASE_ARM64_T8101 kern.maxvnodes: 119296 kern.maxproc: 2000 kern.maxfiles: 12288 kern.argmax: 1048576 kern.securelevel: 0 kern.hostname: Veronikas-Air kern.hostid: 0 kern.clockrate: { hz = 100, tick = 10000, tickadj = 0, profhz = 100, stathz = 100 } kern.posix1version: 200112 kern.ngroups: 16 kern.job_control: 1 kern.saved_ids: 1 kern.boottime: { sec = 1646661100, usec = 321125 } Mon Mar 7 13:51:40 2022 kern.nisdomainname: kern.maxfilesperproc: 10240 kern.maxprocperuid: 1333 kern.ipc.maxsockbuf: 8388608 kern.ipc.sockbuf_waste_factor: 8 kern.ipc.somaxconn: 128 kern.ipc.nmbclusters: 65536 kern.ipc.soqlimitcompat: 1 kern.ipc.io_policy.log: 0 kern.ipc.io_policy.uuid: 1 kern.ipc.mb_drain_force: 0 kern.ipc.mb_drain_maxint: 0 kern.ipc.mb_memory_pressure_percentage: 80 kern.ipc.mb_normalized: 0 kern.ipc.mb_watchdog: 1 kern.ipc.mleak_sample_factor: 500 kern.ipc.extbkidlercvhiwat: 131072 kern.ipc.extbkidletime: 600 kern.ipc.maxextbkidleperproc: 1 kern.ipc.socket_debug: 0 kern.ipc.sodefunct_calls: 3299 kern.ipc.sodefunctlog: 0 kern.ipc.sorecvmincopy: 16384 kern.ipc.soreserveheadroom: 1 kern.ipc.sorestrictrecv: 1 kern.ipc.sorestrictsend: 1 kern.ipc.sosendbigcl_ignore_capab: 0 kern.ipc.sosendjcl: 1 kern.ipc.sosendjcl_ignore_capab: 0 kern.ipc.sosendminchain: 16384 kern.ipc.sotcdb: 0 kern.ipc.sothrottlelog: 0 kern.ipc.njcl: 21848 kern.ipc.njclbytes: 16384 kern.ipc.sbmb_cnt: 10 kern.ipc.sbmb_cnt_floor: 1 kern.ipc.sbmb_cnt_peak: 25924 kern.ipc.sbmb_limreached: 0 kern.ipc.soqlencomp: 0 kern.ipc.throttle_best_effort: 0 kern.ipc.maxrecvmsgx: 100 kern.ipc.maxsendmsgx: 100 kern.usrstack: 1875361792 kern.netboot: 0 kern.sysv.shmall: 1024 kern.sysv.shmmax: 4194304 kern.sysv.shmmin: 1 kern.sysv.shmmni: 32 kern.sysv.shmseg: 8 kern.sysv.semmni: 87381 kern.sysv.semmns: 87381 kern.sysv.semmnu: 87381 kern.sysv.semmsl: 87381 kern.sysv.semume: 10 kern.aiomax: 90 kern.aioprocmax: 16 kern.aiothreads: 4 kern.corefile: /cores/core.%P kern.coredump: 1 kern.sugid_coredump: 0 kern.delayterm: 0 kern.shreg_private: 0 kern.posix.sem.max: 10000 kern.usrstack64: 6170329088 kern.tfp.policy: 2 kern.procname: sysctl kern.speculative_reads_disabled: 0 kern.osversion: 20G80 kern.safeboot: 0 kern.rage_vnode: 0 kern.tty.ptmx_max: 511 kern.check_openevt: 0 kern.threadname: kern.timer.longterm.qlen: 0 kern.timer.longterm.scan_interval: 100000 kern.timer.longterm.scan_limit: 100000 kern.timer.longterm.scan_pauses: 0 kern.timer.longterm.threshold: 0 kern.timer.coalescing_enabled: 1 kern.timer.deadline_tracking_bin_1: 48000 kern.timer.deadline_tracking_bin_2: 120000 kern.hv.ipa_size_16k: 68719476736 kern.hv.ipa_size_4k: 68719476736 kern.hv.max_address_spaces: 256 kern.hv.supported: 1 kern.monotonic.pmis: 40001 0 kern.monotonic.retrograde_updates: 0 0 kern.monotonic.supported: 1 kern.monotonic.task_thread_counting: 1 kern.eventhandler.debug: 0 kern.kdbg.debug: 0 kern.kdbg.experimental_continuous: 0 kern.kdbg.oldest_time: 0 kern.entropy.health.repetition_count_test.failure_count: 0 kern.entropy.health.repetition_count_test.max_observation_count: 8 kern.entropy.health.repetition_count_test.reset_count: 199440487 kern.entropy.health.adaptive_proportion_test.failure_count: 0 kern.entropy.health.adaptive_proportion_test.max_observation_count: 42 kern.entropy.health.adaptive_proportion_test.reset_count: 391054 kern.entropy.health.startup_done: 1 kern.dtrace.buffer_memory_inuse: 0 kern.dtrace.buffer_memory_maxsize: 2863311530 kern.dtrace.difo_maxsize: 262144 kern.dtrace.dof_maxsize: 524288 kern.dtrace.dof_mode: 1 kern.dtrace.err_verbose: 0 kern.dtrace.global_maxsize: 16384 kern.dtrace.provide_private_probes: 1 kern.dtrace.ignore_fbt_blacklist: 0 kern.skywalk.netif.default_drop: 0 kern.skywalk.flowswitch.ip_reass: 1 kern.skywalk.flowswitch.rx_agg_tcp: 16384 kern.skywalk.flowswitch.rx_agg_tcp_host: 2 kern.skywalk.flowswitch.ipfm_frag_ttl: 60 kern.skywalk.flowswitch.ipfm_timeout_tcall_ival: 1 kern.skywalk.flowswitch.flow_route_expire: 600 kern.skywalk.flowswitch.anpi1.ipfm.frag_limit: 352 kern.skywalk.flowswitch.anpi1.ipfm.frag_count: 0 kern.skywalk.flowswitch.anpi1.ipfm.queue_limit: 176 kern.skywalk.flowswitch.anpi1.ipfm.queue_count: 0 kern.skywalk.flowswitch.anpi0.ipfm.frag_limit: 352 kern.skywalk.flowswitch.anpi0.ipfm.frag_count: 0 kern.skywalk.flowswitch.anpi0.ipfm.queue_limit: 176 kern.skywalk.flowswitch.anpi0.ipfm.queue_count: 0 kern.skywalk.flowswitch.en4.ipfm.frag_limit: 352 kern.skywalk.flowswitch.en4.ipfm.frag_count: 0 kern.skywalk.flowswitch.en4.ipfm.queue_limit: 176 kern.skywalk.flowswitch.en4.ipfm.queue_count: 0 kern.skywalk.flowswitch.en3.ipfm.frag_limit: 352 kern.skywalk.flowswitch.en3.ipfm.frag_count: 0 kern.skywalk.flowswitch.en3.ipfm.queue_limit: 176 kern.skywalk.flowswitch.en3.ipfm.queue_count: 0 kern.skywalk.flowswitch.en1.ipfm.frag_limit: 992 kern.skywalk.flowswitch.en1.ipfm.frag_count: 0 kern.skywalk.flowswitch.en1.ipfm.queue_limit: 496 kern.skywalk.flowswitch.en1.ipfm.queue_count: 0 kern.skywalk.flowswitch.en2.ipfm.frag_limit: 992 kern.skywalk.flowswitch.en2.ipfm.frag_count: 0 kern.skywalk.flowswitch.en2.ipfm.queue_limit: 496 kern.skywalk.flowswitch.en2.ipfm.queue_count: 0 kern.skywalk.flowswitch.en0.ipfm.frag_limit: 352 kern.skywalk.flowswitch.en0.ipfm.frag_count: 0 kern.skywalk.flowswitch.en0.ipfm.queue_limit: 176 kern.skywalk.flowswitch.en0.ipfm.queue_count: 0 kern.skywalk.flowswitch.awdl0.ipfm.frag_limit: 352 kern.skywalk.flowswitch.awdl0.ipfm.frag_count: 0 kern.skywalk.flowswitch.awdl0.ipfm.queue_limit: 176 kern.skywalk.flowswitch.awdl0.ipfm.queue_count: 0 kern.skywalk.flowswitch.ap1.ipfm.frag_limit: 352 kern.skywalk.flowswitch.ap1.ipfm.frag_count: 0 kern.skywalk.flowswitch.ap1.ipfm.queue_limit: 176 kern.skywalk.flowswitch.ap1.ipfm.queue_count: 0 kern.skywalk.ring_stat_enable: 0 kern.jetsam_aging_policy: 2 kern.memorystatus_apps_idle_delay_time: 10 kern.memorystatus_level: 49 kern.memorystatus_sysprocs_idle_delay_time: 10 kern.memorystatus_purge_on_critical: 8 kern.memorystatus_purge_on_urgent: 5 kern.memorystatus_purge_on_warning: 2 kern.vm_pressure_level_transition_threshold: 30 kern.msgbuf: 131072 kern.task_exc_guard_default: 0 kern.ulock_adaptive_spin_usecs: 20 kern.secure_kernel: 0 kern.willuserspacereboot: 0 kern.maxnbuf: 9461 kern.nbuf: 9461 kern.flush_cache_on_write: 0 kern.wq_max_constrained_threads: 64 kern.wq_max_threads: 512 kern.wq_max_timer_interval_usecs: 50000 kern.wq_reduce_pool_window_usecs: 5000000 kern.wq_stalled_window_usecs: 200 kern.ds_supgroups_supported: 1 kern.libmalloc_experiments: 0 kern.sugid_scripts: 0 kern.affinity_sets_enabled: 1 kern.affinity_sets_mapping: 1 kern.apfsprebootuuid: E11AA67D-78F8-482A-B213-6F50142CB4BD kern.bootargs: kern.bootsessionuuid: 2D9FA5DB-37B0-443A-8F03-C0B562E25B8D kern.bootuuid: E11AA67D-78F8-482A-B213-6F50142CB4BD kern.cpu_checkin_interval: 4000 kern.darkboot: 0 kern.direct_handoff: 1 kern.filesetuuid: E46841F8-9DC3-FD7A-CEC6-F404AC995579 kern.free_vnodes: 96238 kern.hv_disable: 0 kern.hv_support: 1 kern.hv_vmm_present: 0 kern.ikm_signature_failure_id: 0 kern.ikm_signature_failures: 0 kern.iossupportversion: 14.7 kern.ipc_portbt: 0 kern.ipc_voucher_trace_contents: 0 kern.kern_feature_overrides: 1 kern.kernelcacheuuid: E46841F8-9DC3-FD7A-CEC6-F404AC995579 kern.minimalboot: 0 kern.namecache_disabled: 0 kern.num_files: 4798 kern.num_recycledvnodes: 4396137 kern.num_static_scalable_counters: 31 kern.num_tasks: 2048 kern.num_taskthreads: 2048 kern.num_threads: 10240 kern.num_vnodes: 119296 kern.osproductversion: 11.5.1 kern.osproductversioncompat: 10.16 kern.osreleasetype: User kern.preheat_max_bytes: 1048576 kern.preheat_min_bytes: 32768 kern.sched: edge kern.sched_allow_NO_SMT_threads: 1 kern.sched_enable_smt: 1 kern.singleuser: 0 kern.slide: 1 kern.speculative_prefetch_max: 201326592 kern.speculative_prefetch_max_iosize: 524288 kern.stack_depth_max: 0 kern.stack_size: 16384 kern.system_version_compat: 0 kern.thread_groups_supported: 1 kern.timer_coalesce_bg_ns_max: 100000000 kern.timer_coalesce_bg_scale: -5 kern.timer_coalesce_fp_ns_max: 1000000 kern.timer_coalesce_fp_scale: 3 kern.timer_coalesce_kt_ns_max: 1000000 kern.timer_coalesce_kt_scale: 3 kern.timer_coalesce_tier0_ns_max: 1000000 kern.timer_coalesce_tier0_scale: 3 kern.timer_coalesce_tier1_ns_max: 5000000 kern.timer_coalesce_tier1_scale: 2 kern.timer_coalesce_tier2_ns_max: 20000000 kern.timer_coalesce_tier2_scale: 1 kern.timer_coalesce_tier3_ns_max: 75000000 kern.timer_coalesce_tier3_scale: -2 kern.timer_coalesce_tier4_ns_max: 1000000 kern.timer_coalesce_tier4_scale: 3 kern.timer_coalesce_tier5_ns_max: 1000000 kern.timer_coalesce_tier5_scale: 3 kern.timer_coalesce_ts_ns_max: 1000000 kern.timer_coalesce_ts_scale: 3 kern.timer_resort_threshold_ns: 50000000 kern.trial_deployment_id: -1 kern.trial_experiment_id: kern.trial_treatment_id: kern.uuid: AC4A14A7-8A8E-3AE6-85A6-55E6B2502BF9 kern.vfsnspace: 0 kern.vm_max_batch: 256 kern.vm_max_delayed_work_limit: 32 kern.vm_page_free_min: 3500 kern.vm_page_free_reserved: 776 kern.vm_page_free_target: 4000 kern.vm_page_speculative_percentage: 5 kern.vm_page_speculative_q_age_ms: 500 kern.progressmeterenable: 0 kern.useractive_abs_time: 15345478090361 kern.userinactive_abs_time: 0 kern.bootsignature: kern.hibernatefile: /var/vm/sleepimage kern.hibernatemode: 0 kern.hibernatecount: 2 kern.hibernatehidready: 0 kern.hibernategraphicsready: 0 kern.hibernatelockscreenready: 0 kern.hibernatewakenotification: 0 kern.pmtimeout: 0 kern.iokittest: 0 kern.aotmode: 0 kern.waketime: { sec = 1649405491, usec = 287319 } Fri Apr 8 09:11:31 2022 kern.sleeptime: { sec = 1649404881, usec = 296784 } Fri Apr 8 09:01:21 2022 kern.wakereason: SMC.OutboxNotEmpty smc.70070000 lid kern.aotmodebits: 0 kern.willshutdown: 0 kern.progressmeter: 61 kern.wake_abs_time: 15345477599391 kern.consoleoptions: 0 kern.sleep_abs_time: 15345476521050 kern.prng.scheduled_reseed_count: 87243 kern.prng.scheduled_reseed_max_sample_count: 9197797 kern.prng.entropy_max_sample_count: 11202 kern.prng.pool_0.sample_count: 0 kern.prng.pool_0.drain_count: 87243 kern.prng.pool_0.max_sample_count: 8394 kern.prng.pool_1.sample_count: 76 kern.prng.pool_1.drain_count: 43621 kern.prng.pool_1.max_sample_count: 10589 kern.prng.pool_2.sample_count: 367 kern.prng.pool_2.drain_count: 21810 kern.prng.pool_2.max_sample_count: 9766 kern.prng.pool_3.sample_count: 153 kern.prng.pool_3.drain_count: 10905 kern.prng.pool_3.max_sample_count: 11020 kern.prng.pool_4.sample_count: 1052 kern.prng.pool_4.drain_count: 5452 kern.prng.pool_4.max_sample_count: 16167 kern.prng.pool_5.sample_count: 1096 kern.prng.pool_5.drain_count: 2726 kern.prng.pool_5.max_sample_count: 24982 kern.prng.pool_6.sample_count: 1532 kern.prng.pool_6.drain_count: 1363 kern.prng.pool_6.max_sample_count: 38876 kern.prng.pool_7.sample_count: 10637 kern.prng.pool_7.drain_count: 681 kern.prng.pool_7.max_sample_count: 53671 kern.prng.pool_8.sample_count: 42791 kern.prng.pool_8.drain_count: 340 kern.prng.pool_8.max_sample_count: 73063 kern.prng.pool_9.sample_count: 42892 kern.prng.pool_9.drain_count: 170 kern.prng.pool_9.max_sample_count: 116691 kern.prng.pool_10.sample_count: 42325 kern.prng.pool_10.drain_count: 85 kern.prng.pool_10.max_sample_count: 156604 kern.prng.pool_11.sample_count: 197317 kern.prng.pool_11.drain_count: 42 kern.prng.pool_11.max_sample_count: 260311 kern.prng.pool_12.sample_count: 195040 kern.prng.pool_12.drain_count: 21 kern.prng.pool_12.max_sample_count: 428872 kern.prng.pool_13.sample_count: 528223 kern.prng.pool_13.drain_count: 10 kern.prng.pool_13.max_sample_count: 788796 kern.prng.pool_14.sample_count: 505428 kern.prng.pool_14.drain_count: 5 kern.prng.pool_14.max_sample_count: 1397591 kern.prng.pool_15.sample_count: 1654432 kern.prng.pool_15.drain_count: 2 kern.prng.pool_15.max_sample_count: 2427923 kern.prng.pool_16.sample_count: 1673657 kern.prng.pool_16.drain_count: 1 kern.prng.pool_16.max_sample_count: 4630834 kern.prng.pool_17.sample_count: 6213503 kern.prng.pool_17.drain_count: 0 kern.prng.pool_17.max_sample_count: 6213503 kern.prng.pool_18.sample_count: 6267021 kern.prng.pool_18.drain_count: 0 kern.prng.pool_18.max_sample_count: 6267021 kern.prng.pool_19.sample_count: 6260459 kern.prng.pool_19.drain_count: 0 kern.prng.pool_19.max_sample_count: 6260459 kern.prng.pool_20.sample_count: 6228857 kern.prng.pool_20.drain_count: 0 kern.prng.pool_20.max_sample_count: 6228857 kern.prng.pool_21.sample_count: 6277400 kern.prng.pool_21.drain_count: 0 kern.prng.pool_21.max_sample_count: 6277400 kern.prng.pool_22.sample_count: 6306935 kern.prng.pool_22.drain_count: 0 kern.prng.pool_22.max_sample_count: 6306935 kern.prng.pool_23.sample_count: 6296481 kern.prng.pool_23.drain_count: 0 kern.prng.pool_23.max_sample_count: 6296481 kern.prng.pool_24.sample_count: 6268731 kern.prng.pool_24.drain_count: 0 kern.prng.pool_24.max_sample_count: 6268731 kern.prng.pool_25.sample_count: 6181951 kern.prng.pool_25.drain_count: 0 kern.prng.pool_25.max_sample_count: 6181951 kern.prng.pool_26.sample_count: 6280729 kern.prng.pool_26.drain_count: 0 kern.prng.pool_26.max_sample_count: 6280729 kern.prng.pool_27.sample_count: 6192975 kern.prng.pool_27.drain_count: 0 kern.prng.pool_27.max_sample_count: 6192975 kern.prng.pool_28.sample_count: 6215464 kern.prng.pool_28.drain_count: 0 kern.prng.pool_28.max_sample_count: 6215464 kern.prng.pool_29.sample_count: 6251027 kern.prng.pool_29.drain_count: 0 kern.prng.pool_29.max_sample_count: 6251027 kern.prng.pool_30.sample_count: 6228535 kern.prng.pool_30.drain_count: 0 kern.prng.pool_30.max_sample_count: 6228535 kern.prng.pool_31.sample_count: 6273945 kern.prng.pool_31.drain_count: 0 kern.prng.pool_31.max_sample_count: 6273945 kern.monotonicclock: 34015183 kern.monotonicclock_usecs: 34015183085693 15694098122424 kern.monotonicclock_rate_usecs: 30 kern.monotoniclock_offset_usecs: 1615404832837707 kern.pthread_mutex_default_policy: 0 kern.amfm_log_ctl: 0 vm.loadavg: { 1.96 2.13 2.03 } vm.swapusage: total = 2048.00M used = 785.00M free = 1263.00M (encrypted) vm.add_wire_count_over_global_limit: 0 vm.add_wire_count_over_user_limit: 0 vm.compressor_available: 1 vm.compressor_bytes_used: 2372038592 vm.compressor_compressed_bytes: 3913382548136 vm.compressor_eval_period_in_msecs: 250 vm.compressor_input_bytes: 12975945678848 vm.compressor_is_active: 1 vm.compressor_min_csegs_per_major_compaction: 30 vm.compressor_mode: 4 vm.compressor_sample_max_in_msecs: 10000 vm.compressor_sample_min_in_msecs: 500 vm.compressor_swapout_target_age: 0 vm.compressor_swapouts_under_300s: 10768 vm.compressor_swapouts_under_30s: 12753 vm.compressor_swapouts_under_60s: 3273 vm.compressor_swapper_defrag_swapins: 19047 vm.compressor_swapper_reclaim_swapins: 42089 vm.compressor_swapper_swapout_fileq_throttled: 0 vm.compressor_swapper_swapout_fragmentation_detected: 15314375 vm.compressor_swapper_swapout_free_count_low: 0 vm.compressor_swapper_swapout_thrashing_detected: 0 vm.compressor_swapper_swapout_threshold_exceeded: 94810 vm.compressor_thrashing_min_per_10msecs: 20 vm.compressor_thrashing_threshold_per_10msecs: 50 vm.compressor_timing_enabled: 0 vm.darkwake_mode: 0 vm.global_no_user_wire_amount: 2319282340 vm.global_user_wire_limit: 6270652252 vm.lz4_compressed_bytes: 0 vm.lz4_compression_failures: 0 vm.lz4_compressions: 0 vm.lz4_decompressed_bytes: 0 vm.lz4_decompressions: 0 vm.lz4_max_failure_run_length: -1 vm.lz4_max_failure_skips: 0 vm.lz4_max_preselects: 0 vm.lz4_profitable_bytes: 0 vm.lz4_run_continue_bytes: 0 vm.lz4_run_preselection_threshold: -1 vm.lz4_threshold: 12288 vm.lz4_wk_compression_delta: 0 vm.lz4_wk_compression_negative_delta: 0 vm.swapfileprefix: /System/Volumes/VM/swapfile vm.uc_decompressions: 0 vm.user_wire_limit: 6270652252 vm.vm_copy_src_large: 0 vm.vm_copy_src_not_internal: 12 vm.vm_copy_src_not_symmetric: 2 vm.vm_page_background_count: 10881 vm.vm_page_background_exclude_external: 0 vm.vm_page_background_external_count: 3484 vm.vm_page_background_internal_count: 7397 vm.vm_page_background_mode: 1 vm.vm_page_background_promoted_count: 1475536 vm.vm_page_background_target: 19318 vm.vm_page_external_count: 71211 vm.vm_page_filecache_min: 87711 vm.vm_page_xpmapped_min: 19727 vm.vm_pageout_considered_bq_external: 13537933 vm.vm_pageout_considered_bq_internal: 55747640 vm.vm_pageout_rejected_bq_external: 0 vm.vm_pageout_rejected_bq_internal: 0 vm.vm_ripe_target_age_in_secs: 172800 vm.wk_catime: 0 vm.wk_compressed_bytes_exclusive: 0 vm.wk_compressed_bytes_total: 0 vm.wk_compression_failures: 0 vm.wk_compressions: 0 vm.wk_compressions_exclusive: 0 vm.wk_datime: 0 vm.wk_decompressed_bytes: 0 vm.wk_decompressions: 0 vm.wk_mzv_compressions: 0 vm.wk_sv_compressions: 0 vm.wk_sv_decompressions: 0 vm.wkdm_reeval_threshold: 1536 vm.wkh_catime: 0 vm.wkh_compressions: 0 vm.wkh_datime: 0 vm.wkh_decompressions: 0 vm.wks_catime: 0 vm.wks_compressed_bytes: 0 vm.wks_compression_failures: 0 vm.wks_compressions: 0 vm.wks_datime: 0 vm.wks_decompressions: 0 vm.wks_sv_compressions: 0 vm.cs_blob_count: 717 vm.cs_blob_count_peak: 1038 vm.cs_blob_size: 64514437 vm.cs_blob_size_max: 20496384 vm.cs_blob_size_peak: 71221447 vm.all_reusable_calls: 0 vm.all_reuse_calls: 0 vm.apple_protect_pager_cache_limit: 20 vm.apple_protect_pager_count: 0 vm.apple_protect_pager_count_mapped: 0 vm.can_reuse_failure: 219 vm.can_reuse_success: 801 vm.copied_on_read: 17 vm.corpse_footprint_count: 64 vm.corpse_footprint_full: 0 vm.corpse_footprint_no_buf: 0 vm.corpse_footprint_size_avg: 49965 vm.corpse_footprint_size_max: 61632 vm.cs_defer_to_pmap_cs: 0 vm.cs_defer_to_pmap_cs_not: 6860575 vm.cs_executable_create_upl: 0 vm.cs_executable_wire: 0 vm.free_shared: 47 vm.iopl_pages_tainted: 0 vm.kern_lpage_count: 0 vm.madvise_free_debug: 0 vm.map_lookup_locked_copy_shadow_count: 684031 vm.map_lookup_locked_copy_shadow_max: 236814336 vm.map_lookup_locked_copy_shadow_size: 15993886851072 vm.map_lookup_locked_copy_slowly_count: 0 vm.map_lookup_locked_copy_slowly_error: 0 vm.map_lookup_locked_copy_slowly_max: 0 vm.map_lookup_locked_copy_slowly_restart: 0 vm.map_lookup_locked_copy_slowly_size: 0 vm.map_lookup_locked_copy_strategically_count: 129 vm.map_lookup_locked_copy_strategically_error: 0 vm.map_lookup_locked_copy_strategically_max: 33554432 vm.map_lookup_locked_copy_strategically_restart: 0 vm.map_lookup_locked_copy_strategically_size: 4328521728 vm.memory_pressure: 0 vm.page_busy_absent_skipped: 0 vm.page_cleaned_count: 0 vm.page_free_count: 7215 vm.page_free_wanted: 0 vm.page_pageable_external_count: 70150 vm.page_pageable_internal_count: 163710 vm.page_purgeable_count: 1880 vm.page_purgeable_wired_count: 0 vm.page_reusable_count: 4595 vm.page_speculative_count: 2785 vm.pageout_freed_cleaned: 523259 vm.pageout_freed_external: 19347435 vm.pageout_freed_speculative: 34151235 vm.pageout_inactive_clean: 97930547 vm.pageout_inactive_dirty_external: 400284 vm.pageout_inactive_dirty_internal: 797342315 vm.pageout_inactive_used: 582829418 vm.pageout_speculative_clean: 34151235 vm.pages: 470894 vm.pagesize: 16384 vm.partial_reusable_calls: 119202536 vm.partial_reuse_calls: 15839869 vm.prefault_nb_bailout: 0 vm.prefault_nb_pages: 233791 vm.protect_privileged_from_untrusted: 1 vm.retired_pages_count: 0 vm.reusable_failure: 2355276 vm.reusable_nonwritable: 122755 vm.reusable_pages_shared: 3328251 vm.reusable_reclaimed: 0 vm.reusable_shared: 14694064 vm.reusable_success: 118688588 vm.reuse_failure: 0 vm.reuse_success: 9152381 vm.shared_region_count: 2 vm.shared_region_destroy_delay: 120 vm.shared_region_pager_copied: 0 vm.shared_region_pager_reclaimed: 927965 vm.shared_region_pager_slid: 3811182 vm.shared_region_pager_slid_error: 0 vm.shared_region_peak: 2 vm.shared_region_persistence: 0 vm.shared_region_pivot: 0 vm.shared_region_unnest_logging: 1 vm.shared_region_version: 3 vm.upl_pages_tainted: 0 vm.vm_create_upl_extra_cow: 10149 vm.vm_create_upl_extra_cow_pages: 4495271 vm.vm_create_upl_lookup_failure_copy: 0 vm.vm_create_upl_lookup_failure_write: 0 vm.vm_debug_events: 0 vm.vm_do_collapse_compressor: 24593 vm.vm_do_collapse_compressor_pages: 16152 vm.vm_do_collapse_terminate: 24594 vm.vm_do_collapse_terminate_failure: 0 vm.vm_max_kernel_address: 18446742493161586687 vm.vm_min_kernel_address: 18446741874686296064 vm.vm_page_free_target: 4000 vm.vm_should_cow_but_wired: 0 vm.vmtc_128byte: 0 vm.vmtc_16_byte: 0 vm.vmtc_1_byte: 0 vm.vmtc_256_byte: 0 vm.vmtc_2_byte: 0 vm.vmtc_32_byte: 0 vm.vmtc_4_byte: 0 vm.vmtc_64_byte: 0 vm.vmtc_8_byte: 0 vm.vmtc_copyin_fail: 0 vm.vmtc_not_eligible: 0 vm.vmtc_not_found: 0 vm.vmtc_one_bit_flip: 0 vm.vmtc_total: 0 vm.vmtc_undiagnosed: 0 vm.shared_region_trace_level: 1 vm.cs_all_vnodes: 0 vm.cs_debug: 0 vm.cs_debug_fail_on_unsigned_code: 0 vm.cs_debug_unsigned_exec_failures: 0 vm.cs_debug_unsigned_mmap_failures: 0 vm.cs_enforcement_panic: 0 vm.cs_force_hard: 0 vm.cs_force_kill: 0 vm.cs_library_validation: 0 vm.cs_process_enforcement: 0 vm.cs_system_enforcement: 1 vfs.generic.maxtypenum: 28 vfs.generic.nfs.server.async: 0 vfs.generic.nfs.server.export_hash_size: 64 vfs.generic.nfs.server.fsevents: 1 vfs.generic.nfs.server.gss_context_ttl: 28800 vfs.generic.nfs.server.nfsd_sock_idle_timeout: 3600 vfs.generic.nfs.server.nfsd_tcp_connections: 0 vfs.generic.nfs.server.nfsd_thread_count: 0 vfs.generic.nfs.server.nfsd_thread_max: 0 vfs.generic.nfs.server.reqcache_size: 64 vfs.generic.nfs.server.request_queue_length: 128 vfs.generic.nfs.server.require_resv_port: 0 vfs.generic.nfs.server.upcall_queue_count: 0 vfs.generic.nfs.server.upcall_queue_limit: 0 vfs.generic.nfs.server.upcall_queue_max_seen: 0 vfs.generic.nfs.server.use_upcall_svc: 1 vfs.generic.nfs.server.user_stats: 1 vfs.generic.nfs.server.wg_delay: 1000 vfs.generic.nfs.server.wg_delay_v3: 0 vfs.generic.nfs.client.access_cache_timeout: 60 vfs.generic.nfs.client.access_delete: 1 vfs.generic.nfs.client.access_dotzfs: 1 vfs.generic.nfs.client.access_for_getattr: 0 vfs.generic.nfs.client.allow_async: 0 vfs.generic.nfs.client.callback_port: 0 vfs.generic.nfs.client.debug_ctl: 0 vfs.generic.nfs.client.default_nfs4domain: vfs.generic.nfs.client.idmap_ctrl: 1 vfs.generic.nfs.client.initialdowndelay: 5 vfs.generic.nfs.client.iosize: 1048576 vfs.generic.nfs.client.is_mobile: 1 vfs.generic.nfs.client.lockd_mounts: 0 vfs.generic.nfs.client.max_async_writes: 128 vfs.generic.nfs.client.nextdowndelay: 30 vfs.generic.nfs.client.nfsiod_thread_count: 0 vfs.generic.nfs.client.nfsiod_thread_max: 16 vfs.generic.nfs.client.readlink_nocache: 0 vfs.generic.nfs.client.root_steals_gss_context: 0 vfs.generic.nfs.client.squishy_flags: 11 vfs.generic.nfs.client.statfs_rate_limit: 10 vfs.generic.nfs.client.tcp_sockbuf: 131072 vfs.generic.root_unmounted_cleanly: 0 vfs.generic.sync_timeout: 5 vfs.generic.hfs.kdebug.allocation: 0 vfs.generic.hfs.jnl.trim_flush: 240 vfs.generic.hfs.jnl.kdebug.trim: 0 vfs.generic.hfs.allocated: 0 vfs.generic.always_do_fullfsync: 0 vfs.generic.apfs.fusion_rc_promotion_size_limit_mb: 4096 vfs.generic.apfs.fusion_rc_flags: 0 vfs.generic.apfs.fusion_w2rc_filled_ratio_threshold: 50 vfs.generic.apfs.fusion_lc_rc_promotion_threshold_mult: 8 vfs.generic.apfs.fusion_rc_promotion_threshold_mult: 4 vfs.generic.apfs.fusion_wbc_buffersize: 16777216 vfs.generic.apfs.fusion_verbosity_flags: 0 vfs.generic.apfs.fusion_paranoia_level: 0 vfs.generic.apfs.fusion_swapfile_backoff: 4 vfs.generic.apfs.fusion_slow_io_threshold: 10240 vfs.generic.apfs.fusion_elevator_throttle: 100 vfs.generic.apfs.fusion_promoter_throttle: 100 vfs.generic.apfs.fusion_promoter_queue_limit: 1000 vfs.generic.apfs.fusion_wbc_elevator_wmk: 0 vfs.generic.apfs.fusion_wbc_backoff_wmk_reenable: 25 vfs.generic.apfs.fusion_wbc_backoff_wmk_med: 95 vfs.generic.apfs.fusion_wbc_backoff_wmk_low: 60 vfs.generic.apfs.allocated: 111793689 vfs.generic.autofs.vnode_recycle_on_inactive: 1 vfs.nummntops: 133 vfs.nspace.prevent_materialization: 0 vfs.nspace.resolver: 0 vfs.nspace.thread_prevent_materialization: 0 net.local.stream.recvspace: 8192 net.local.stream.sendspace: 8192 net.local.stream.tracemdns: 0 net.local.dgram.maxdgram: 2048 net.local.dgram.recvspace: 4096 net.local.inflight: 0 net.inet.ip.portrange.first: 49152 net.inet.ip.portrange.hifirst: 49152 net.inet.ip.portrange.hilast: 65535 net.inet.ip.portrange.ipport_allow_udp_port_exhaustion: 0 net.inet.ip.portrange.last: 65535 net.inet.ip.portrange.lowfirst: 1023 net.inet.ip.portrange.lowlast: 600 net.inet.ip.forwarding: 0 net.inet.ip.redirect: 1 net.inet.ip.ttl: 64 net.inet.ip.rtexpire: 10 net.inet.ip.rtminexpire: 10 net.inet.ip.rtmaxcache: 128 net.inet.ip.sourceroute: 0 net.inet.ip.accept_sourceroute: 0 net.inet.ip.gifttl: 30 net.inet.ip.linklocal.in.allowbadttl: 1 net.inet.ip.mcast.loop: 1 net.inet.ip.mcast.maxgrpsrc: 512 net.inet.ip.mcast.maxsocksrc: 128 net.inet.ip.dummynet.curr_time: 0 net.inet.ip.dummynet.debug: 0 net.inet.ip.dummynet.expire: 1 net.inet.ip.dummynet.extract_heap: 0 net.inet.ip.dummynet.hash_size: 64 net.inet.ip.dummynet.max_chain_len: 16 net.inet.ip.dummynet.ready_heap: 0 net.inet.ip.dummynet.red_avg_pkt_size: 512 net.inet.ip.dummynet.red_lookup_depth: 256 net.inet.ip.dummynet.red_max_pkt_size: 1500 net.inet.ip.dummynet.search_steps: 0 net.inet.ip.dummynet.searches: 0 net.inet.ip.subnets_are_local: 0 net.inet.ip.random_id_collisions: 0 net.inet.ip.random_id_statistics: 0 net.inet.ip.random_id_total: 0 net.inet.ip.adj_clear_hwcksum: 0 net.inet.ip.adj_partial_sum: 1 net.inet.ip.check_interface: 1 net.inet.ip.checkinterface_debug: 0 net.inet.ip.fragpackets: 0 net.inet.ip.maxfragpackets: 2048 net.inet.ip.maxfragsperpacket: 128 net.inet.ip.random_id: 1 net.inet.ip.rx_chaining: 1 net.inet.ip.rx_chainsz: 6 net.inet.ip.sendsourcequench: 0 net.inet.ip.maxchainsent: 49 net.inet.ip.output_perf: 0 net.inet.ip.output_perf_bins: 0 net.inet.ip.rfc6864: 1 net.inet.ip.select_srcif_debug: 0 net.inet.icmp.maskrepl: 0 net.inet.icmp.icmplim: 250 net.inet.icmp.timestamp: 0 net.inet.icmp.icmplim_random_incr: 250 net.inet.icmp.bmcastecho: 1 net.inet.icmp.drop_redirect: 1 net.inet.icmp.log_redirect: 0 net.inet.igmp.debug: 0 net.inet.igmp.default_version: 3 net.inet.igmp.gsrdelay: 10 net.inet.igmp.legacysupp: 0 net.inet.igmp.recvifkludge: 1 net.inet.igmp.sendlocal: 1 net.inet.igmp.sendra: 1 net.inet.igmp.v1enable: 1 net.inet.igmp.v2enable: 1 net.inet.tcp.mssdflt: 512 net.inet.tcp.keepidle: 7200000 net.inet.tcp.keepintvl: 75000 net.inet.tcp.sendspace: 131072 net.inet.tcp.recvspace: 131072 net.inet.tcp.keepinit: 75000 net.inet.tcp.v6mssdflt: 1024 net.inet.tcp.log.enable: 0 net.inet.tcp.log.enable_usage: connection:0x1 rtt:0x2 ka:0x4 loop:0x10 local:0x20 gw:0x40 syn:0x100 fin:0x200 rst:0x400 dropnecp:0x1000 droppcb:0x2000 droppkt:0x4000 fswflow:0x8000 net.inet.tcp.log.level_info: 0 net.inet.tcp.log.privacy: 1 net.inet.tcp.log.rate_current: 0 net.inet.tcp.log.rate_duration: 60 net.inet.tcp.log.rate_exceeded_total: 0 net.inet.tcp.log.rate_limit: 600 net.inet.tcp.log.rate_max: 0 net.inet.tcp.log.rtt_port: 0 net.inet.tcp.log.thflags_if_family: 0 net.inet.tcp.reass.overflows: 0 net.inet.tcp.backoff_maximum: 65536 net.inet.tcp.clear_tfocache: 0 net.inet.tcp.disable_tcp_heuristics: 0 net.inet.tcp.ecn_timeout: 60 net.inet.tcp.ack_strategy: 1 net.inet.tcp.aggressive_rcvwnd_inc: 1 net.inet.tcp.autorcvbufmax: 4194304 net.inet.tcp.autotunereorder: 1 net.inet.tcp.blackhole: 0 net.inet.tcp.challengeack_limit: 10 net.inet.tcp.delayed_ack: 3 net.inet.tcp.disable_access_to_stats: 1 net.inet.tcp.do_better_lr: 1 net.inet.tcp.do_rfc5961: 1 net.inet.tcp.doautorcvbuf: 1 net.inet.tcp.drop_synfin: 1 net.inet.tcp.flow_control_response: 1 net.inet.tcp.log_in_vain: 0 net.inet.tcp.maxseg_unacked: 8 net.inet.tcp.rcvsspktcnt: 512 net.inet.tcp.recv_allowed_iaj: 5 net.inet.tcp.recvbg: 0 net.inet.tcp.rexmt_thresh: 3 net.inet.tcp.rfc3465: 1 net.inet.tcp.rfc3465_lim2: 1 net.inet.tcp.slowlink_wsize: 8192 net.inet.tcp.acc_iaj_react_limit: 200 net.inet.tcp.ack_compression_rate: 5 net.inet.tcp.autosndbufinc: 8192 net.inet.tcp.autosndbufmax: 4194304 net.inet.tcp.do_ack_compression: 1 net.inet.tcp.ecn_initiate_out: 2 net.inet.tcp.ecn_negotiate_in: 2 net.inet.tcp.ecn_setup_percentage: 100 net.inet.tcp.enable_tlp: 1 net.inet.tcp.local_slowstart_flightsize: 8 net.inet.tcp.min_iaj_win: 16 net.inet.tcp.packetchain: 50 net.inet.tcp.path_mtu_discovery: 1 net.inet.tcp.randomize_timestamps: 1 net.inet.tcp.recv_throttle_minwin: 16384 net.inet.tcp.rtt_recvbg: 1 net.inet.tcp.socket_unlocked_on_output: 1 net.inet.tcp.tso: 1 net.inet.tcp.sack: 1 net.inet.tcp.sack_globalholes: 0 net.inet.tcp.sack_globalmaxholes: 65536 net.inet.tcp.sack_maxholes: 128 net.inet.tcp.fastopen: 3 net.inet.tcp.fastopen_backlog: 10 net.inet.tcp.icmp_may_rst: 1 net.inet.tcp.init_rtt_from_cache: 1 net.inet.tcp.microuptime_init: 6508067 net.inet.tcp.minmss: 216 net.inet.tcp.now_init: 647737810 net.inet.tcp.pcbcount: 196 net.inet.tcp.randomize_ports: 0 net.inet.tcp.rexmt_slop: 200 net.inet.tcp.rtt_min: 100 net.inet.tcp.tcbhashsize: 4096 net.inet.tcp.tso_debug: 0 net.inet.tcp.tw_pcbcount: 1 net.inet.tcp.win_scale_factor: 3 net.inet.tcp.always_keepalive: 0 net.inet.tcp.broken_peer_syn_rexmit_thres: 10 net.inet.tcp.keepcnt: 8 net.inet.tcp.max_persist_timeout: 0 net.inet.tcp.msl: 15000 net.inet.tcp.pmtud_blackhole_detection: 1 net.inet.tcp.pmtud_blackhole_mss: 1200 net.inet.tcp.tcp_resched_timerlist: 800690 net.inet.tcp.tcp_timer_advanced: 1945 net.inet.tcp.timer_fastmode_idlemax: 10 net.inet.tcp.background_sockets: 0 net.inet.tcp.cc_debug: 0 net.inet.tcp.cubic_sockets: 193 net.inet.tcp.newreno_sockets: 0 net.inet.tcp.use_newreno: 0 net.inet.tcp.cubic_fast_convergence: 0 net.inet.tcp.cubic_minor_fixes: 1 net.inet.tcp.cubic_rfc_compliant: 1 net.inet.tcp.cubic_tcp_friendliness: 0 net.inet.tcp.cubic_use_minrtt: 0 net.inet.tcp.bg_allowed_increase: 8 net.inet.tcp.bg_ss_fltsz: 2 net.inet.tcp.bg_target_qdelay: 100 net.inet.tcp.bg_tether_shift: 1 net.inet.udp.checksum: 1 net.inet.udp.maxdgram: 9216 net.inet.udp.recvspace: 786896 net.inet.udp.blackhole: 0 net.inet.udp.log_in_vain: 0 net.inet.udp.pcbcount: 62 net.inet.udp.randomize_ports: 1 net.inet.ipsec.def_policy: 1 net.inet.ipsec.esp_trans_deflev: 1 net.inet.ipsec.esp_net_deflev: 1 net.inet.ipsec.ah_trans_deflev: 1 net.inet.ipsec.ah_net_deflev: 1 net.inet.ipsec.ah_cleartos: 1 net.inet.ipsec.ah_offsetmask: 0 net.inet.ipsec.dfbit: 0 net.inet.ipsec.ecn: 0 net.inet.ipsec.debug: 0 net.inet.ipsec.esp_randpad: -1 net.inet.ipsec.bypass: 1 net.inet.ipsec.esp_port: 0 net.inet.mptcp.dss_csum: 0 net.inet.mptcp.enable: 1 net.inet.mptcp.fail: 1 net.inet.mptcp.keepalive: 840 net.inet.mptcp.mptcp_cap_retr: 4 net.inet.mptcp.probecnt: 5 net.inet.mptcp.probeto: 1000 net.inet.mptcp.rto_thresh: 1500 net.inet.mptcp.rtthist_thresh: 600 net.inet.mptcp.alternate_port: 0 net.inet.mptcp.dbg_area: 31 net.inet.mptcp.dbg_level: 1 net.inet.mptcp.pcbcount: 0 net.inet.mptcp.allow_aggregate: 0 net.inet.mptcp.expected_progress_headstart: 5000 net.inet.mptcp.no_first_party: 0 net.inet.mptcp.nrto: 3 net.inet.mptcp.rto: 3 net.inet.mptcp.tw: 60 net.inet.raw.maxdgram: 8192 net.inet.raw.pcbcount: 1 net.inet.raw.recvspace: 8192 net.inet.log_restricted: 0 net.link.generic.system.ifcount: 18 net.link.generic.system.port_used.entry_count: 0 net.link.generic.system.port_used.entry_gen: 123 net.link.generic.system.port_used.verbose: 0 net.link.generic.system.port_used.wakeuuid_not_set_count: 32 net.link.generic.system.port_used.wakeuuid_not_set_last_if: awdl0 net.link.generic.system.port_used.wakeuuid_not_set_last_time: { sec = 1646662449, usec = 34628 } Mon Mar 7 14:14:09 2022 net.link.generic.system.if_verbose: 0 net.link.generic.system.delaybased_queue: 1 net.link.generic.system.dlil_input_sanity_check: 0 net.link.generic.system.dlil_input_threads: 16 net.link.generic.system.dlil_verbose: 0 net.link.generic.system.enable_netagent: 0 net.link.generic.system.flow_advisory: 1 net.link.generic.system.hwcksum_dbg: 0 net.link.generic.system.hwcksum_dbg_adjusted: 0 net.link.generic.system.hwcksum_dbg_bad_cksum: 0 net.link.generic.system.hwcksum_dbg_bad_rxoff: 0 net.link.generic.system.hwcksum_dbg_finalized_data: 0 net.link.generic.system.hwcksum_dbg_finalized_hdr: 0 net.link.generic.system.hwcksum_dbg_mode: 0 net.link.generic.system.hwcksum_dbg_partial_forced: 0 net.link.generic.system.hwcksum_dbg_partial_forced_bytes: 0 net.link.generic.system.hwcksum_dbg_partial_rxoff_adj: 0 net.link.generic.system.hwcksum_dbg_partial_rxoff_forced: 0 net.link.generic.system.hwcksum_dbg_verified: 0 net.link.generic.system.hwcksum_in_invalidated: 0 net.link.generic.system.hwcksum_rx: 1 net.link.generic.system.hwcksum_tx: 1 net.link.generic.system.rcvq_maxlen: 256 net.link.generic.system.rxpoll: 1 net.link.generic.system.rxpoll_decay: 2 net.link.generic.system.rxpoll_freeze_time: 1000000000 net.link.generic.system.rxpoll_interval_pkts: 0 net.link.generic.system.rxpoll_interval_time: 1000000 net.link.generic.system.rxpoll_max: 0 net.link.generic.system.rxpoll_sample_time: 10000000 net.link.generic.system.rxpoll_wakeups_hiwat: 100 net.link.generic.system.rxpoll_wakeups_lowat: 10 net.link.generic.system.sndq_maxlen: 128 net.link.generic.system.start_delay_disabled: 0 net.link.generic.system.start_delayed: 0 net.link.generic.system.threshold_interval: 2 net.link.generic.system.threshold_notify: 1 net.link.generic.system.tx_chain_len_count: 0 net.link.ether.inet.arp_llreach_base: 120 net.link.ether.inet.arp_unicast_lim: 3 net.link.ether.inet.host_down_time: 20 net.link.ether.inet.keep_announcements: 1 net.link.ether.inet.log_arp_warnings: 0 net.link.ether.inet.max_age: 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net.link.fake.trailer_length: 0 net.link.fake.tx_drops: 0 net.link.fake.tx_headroom: 32 net.link.fake.txstart: 1 net.link.fake.user_access: 0 net.link.fake.wmm_mode: 0 net.link.loopback.dequeue_sc: 0 net.link.loopback.max_dequeue: 256 net.link.loopback.sched_model: 0 net.link.iptap.log: 0 net.link.iptap.total_tap_count: 0 net.link.bond.debug: 0 net.key.debug: 0 net.key.spi_trycnt: 1000 net.key.spi_minval: 256 net.key.spi_maxval: 268435455 net.key.int_random: 60 net.key.larval_lifetime: 30 net.key.blockacq_count: 10 net.key.blockacq_lifetime: 20 net.key.esp_keymin: 256 net.key.esp_auth: 0 net.key.ah_keymin: 128 net.key.prefered_oldsa: 0 net.key.natt_keepalive_interval: 20 net.inet6.ip6.forwarding: 0 net.inet6.ip6.redirect: 1 net.inet6.ip6.hlim: 64 net.inet6.ip6.maxfragpackets: 2048 net.inet6.ip6.accept_rtadv: 1 net.inet6.ip6.keepfaith: 0 net.inet6.ip6.log_interval: 5 net.inet6.ip6.hdrnestlimit: 15 net.inet6.ip6.dad_count: 1 net.inet6.ip6.auto_flowlabel: 1 net.inet6.ip6.defmcasthlim: 1 net.inet6.ip6.gifhlim: 0 net.inet6.ip6.kame_version: 2009/apple-darwin net.inet6.ip6.use_deprecated: 1 net.inet6.ip6.rr_prune: 5 net.inet6.ip6.v6only: 0 net.inet6.ip6.rtexpire: 10 net.inet6.ip6.rtminexpire: 10 net.inet6.ip6.rtmaxcache: 128 net.inet6.ip6.use_tempaddr: 1 net.inet6.ip6.temppltime: 86400 net.inet6.ip6.tempvltime: 604800 net.inet6.ip6.auto_linklocal: 1 net.inet6.ip6.prefer_tempaddr: 1 net.inet6.ip6.use_defaultzone: 0 net.inet6.ip6.maxfrags: 4096 net.inet6.ip6.mcast_pmtu: 0 net.inet6.ip6.neighborgcthresh: 1024 net.inet6.ip6.maxifprefixes: 16 net.inet6.ip6.maxifdefrouters: 64 net.inet6.ip6.maxdynroutes: 1024 net.inet6.ip6.ula_use_tempaddr: 0 net.inet6.ip6.mcast.loop: 1 net.inet6.ip6.mcast.maxgrpsrc: 512 net.inet6.ip6.mcast.maxsocksrc: 128 net.inet6.ip6.fragpackets: 0 net.inet6.ip6.adj_clear_hwcksum: 0 net.inet6.ip6.adj_partial_sum: 1 net.inet6.ip6.check_interface: 1 net.inet6.ip6.checkinterface_debug: 0 net.inet6.ip6.input_perf: 0 net.inet6.ip6.input_perf_bins: 0 net.inet6.ip6.output_perf: 0 net.inet6.ip6.output_perf_bins: 0 net.inet6.ip6.select_src_expensive_secondary_if: 0 net.inet6.ip6.select_src_strong_end: 1 net.inet6.ip6.select_srcaddr_debug: 0 net.inet6.ip6.select_srcif_debug: 0 net.inet6.ip6.cga_conflict_retries: 3 net.inet6.ip6.clat_debug: 0 net.inet6.ip6.compliance_profile: 0 net.inet6.ip6.only_allow_rfc4193_prefixes: 0 net.inet6.ip6.maxchainsent: 50 net.inet6.ip6.dad_enhanced: 1 net.inet6.ipsec6.def_policy: 1 net.inet6.ipsec6.esp_trans_deflev: 1 net.inet6.ipsec6.esp_net_deflev: 1 net.inet6.ipsec6.ah_trans_deflev: 1 net.inet6.ipsec6.ah_net_deflev: 1 net.inet6.ipsec6.ecn: 0 net.inet6.ipsec6.debug: 0 net.inet6.ipsec6.esp_randpad: -1 net.inet6.icmp6.rediraccept: 1 net.inet6.icmp6.redirtimeout: 600 net.inet6.icmp6.nd6_prune: 1 net.inet6.icmp6.nd6_delay: 5 net.inet6.icmp6.nd6_umaxtries: 3 net.inet6.icmp6.nd6_mmaxtries: 3 net.inet6.icmp6.nd6_useloopback: 1 net.inet6.icmp6.nodeinfo: 0 net.inet6.icmp6.errppslimit: 549 net.inet6.icmp6.nd6_debug: 0 net.inet6.icmp6.nd6_accept_6to4: 1 net.inet6.icmp6.nd6_optimistic_dad: 63 net.inet6.icmp6.errppslimit_random_incr: 500 net.inet6.icmp6.nd6_onlink_ns_rfc4861: 0 net.inet6.icmp6.nd6_prune_lazy: 5 net.inet6.icmp6.rappslimit: 10 net.inet6.icmp6.nd6_process_rti: 1 net.inet6.icmp6.nd6_llreach_base: 30 net.inet6.icmp6.nd6_maxproxiedsol: 4 net.inet6.icmp6.nd6_maxsolstgt: 8 net.inet6.icmp6.prproxy_cnt: 0 net.inet6.mld.debug: 0 net.inet6.mld.gsrdelay: 10 net.inet6.mld.use_allow: 1 net.inet6.mld.v1enable: 1 net.inet6.mld.v2enable: 1 net.inet6.send.opmode: 1 net.inet6.send.opstate: 1 net.systm.kctl.autorcvbufhigh: 163840 net.systm.kctl.autorcvbufmax: 262144 net.systm.kctl.debug: 0 net.ppp.l2tp.nb_threads: 0 net.ppp.l2tp.thread_outq_size: 1024 net.classq.sfb.allocation: 0 net.classq.sfb.decrement: 16 net.classq.sfb.hinterval: 0 net.classq.sfb.holdtime: 0 net.classq.sfb.increment: 82 net.classq.sfb.pboxtime: 0 net.classq.sfb.ratelimit: 0 net.classq.verbose: 0 net.classq.target_qdelay: 0 net.classq.update_interval: 0 net.vsock.recvspace: 524288 net.vsock.sendspace: 524288 net.utun.max_pending_input: 512 net.utun.ring_size: 64 net.utun.rx_fsw_ring_size: 128 net.utun.tx_fsw_ring_size: 64 net.netagent.active_count: 30 net.netagent.debug: 5 net.netagent.registered_count: 31 net.restricted_port.enforced: 1 net.restricted_port.verbose: 0 net.cfil.active_count: 0 net.cfil.close_wait_timeout: 1000 net.cfil.debug: 1 net.cfil.log: 3 net.cfil.sbtrim: 1 net.cfil.sock_attached_count: 0 net.pktsched.verbose: 0 net.stats.debug: 0 net.stats.recvspace: 8192 net.stats.sendspace: 2048 net.mpklog.enabled: 1 net.mpklog.type: 0 net.mpklog.version: 1 net.ipsec.debug: 0 net.ipsec.max_pending_input: 512 net.ipsec.ring_size: 64 net.ipsec.rx_fsw_ring_size: 128 net.ipsec.tx_fsw_ring_size: 64 net.ipsec.verify_interface_creation: 0 net.necp.drop_all_level: 0 net.necp.debug: 0 net.necp.pass_loopback: 1 net.necp.pass_keepalives: 1 net.necp.socket_policy_count: 20 net.necp.socket_non_app_policy_count: 20 net.necp.ip_policy_count: 8 net.necp.session_count: 4 net.necp.client_fd_count: 62 net.necp.client_count: 68 net.necp.arena_count: 0 net.necp.nexus_flow_count: 0 net.necp.socket_flow_count: 8 net.necp.if_flow_count: 0 net.necp.observer_fd_count: 0 net.necp.observer_message_limit: 256 net.necp.sysctl_arena_count: 0 net.necp.drop_unentitled_level: 0 net.necp.pass_interpose: 1 net.necp.restrict_multicast: 1 net.necp.dedup_policies: 0 net.necp.drop_dest_debug: 0 net.qos.policy.capable_enabled: 0 net.qos.policy.restrict_avapps: 0 net.qos.policy.restricted: 0 net.qos.policy.wifi_enabled: 0 net.qos.reset_dscp_to_wifi_ac_map: 0 net.qos.verbose: 0 net.ndrv_multi_max_count: 1024 net.statistics_privcheck: 0 net.alf.loglevel: 55 net.alf.perm: 0 net.alf.defaultaction: 1 net.alf.mqcount: 0 net.smb.fs.version: 306000 net.smb.fs.loglevel: 0 net.smb.fs.kern_deadtimer: 60 net.smb.fs.kern_hard_deadtimer: 600 net.smb.fs.kern_soft_deadtimer: 30 net.smb.fs.tcpsndbuf: 8388608 net.smb.fs.tcprcvbuf: 8388608 net.smb.fs.maxwrite: 8388608 net.smb.fs.maxread: 8388608 net.smb.fs.maxsegreadsize: 8388608 net.smb.fs.maxsegwritesize: 8388608 debug.kextlog: 4083 debug.lowpri_throttle_max_iosize: 131072 debug.lowpri_throttle_enabled: 1 debug.lowpri_throttle_tier1_io_period_msecs: 40 debug.lowpri_throttle_tier1_io_period_ssd_msecs: 5 debug.lowpri_throttle_tier1_window_msecs: 25 debug.lowpri_throttle_tier2_io_period_msecs: 85 debug.lowpri_throttle_tier2_io_period_ssd_msecs: 15 debug.lowpri_throttle_tier2_window_msecs: 100 debug.lowpri_throttle_tier3_io_period_msecs: 20 debug.lowpri_throttle_tier3_io_period_ssd_msecs: 25 debug.lowpri_throttle_tier3_window_msecs: 100 debug.bpf_bufsize: 4096 debug.bpf_debug: 0 debug.bpf_maxbufsize: 524288 debug.bpf_maxdevices: 256 debug.bpf_wantpktap: 0 debug.sched: 2 debug.toggle_address_reuse: 0 debug.iokit: 8388608 debug.iotrace: 0 debug.noidle: 0 debug.swd_panic: 1 debug.swd_timeout: 0 debug.swd_wake_timeout: 0 debug.swd_sleep_timeout: 0 debug.didevice_trace: 0 debug.didevice_bounce_count: 0 debug.didevice_no_bounce_count: 0 debug.didevice_cache_fully_satisfied: 0 debug.didevice_cache_spared_bytes: 0 debug.didevice_queue_depth: 0 debug.didevice_cache_size_default: 33554432 debug.didevice_enable_cache: 1 debug.didevice_read_by_kernel_bytes: 0 debug.didevice_write_by_kernel_bytes: 0 debug.mcc_debug: 2 debug.mcc_clampwaycount: -1 debug.batman: 3 debug.iogpu.wired_lwm_mb: 0 hw.ncpu: 8 hw.byteorder: 1234 hw.memsize: 8589934592 hw.activecpu: 8 hw.optional.amx_version: 2 hw.optional.arm64: 1 hw.optional.armv8_1_atomics: 1 hw.optional.armv8_2_fhm: 1 hw.optional.armv8_2_sha3: 1 hw.optional.armv8_2_sha512: 1 hw.optional.armv8_crc32: 1 hw.optional.breakpoint: 6 hw.optional.floatingpoint: 1 hw.optional.neon: 1 hw.optional.neon_fp16: 1 hw.optional.neon_hpfp: 1 hw.optional.ucnormal_mem: 1 hw.optional.watchpoint: 4 hw.cacheconfig: 8 1 1 0 0 0 0 0 0 0 hw.cachelinesize: 128 hw.cachesize: 3617718272 65536 4194304 0 0 0 0 0 0 0 hw.cpu64bit_capable: 1 hw.cpufamily: 458787763 hw.cpusubfamily: 2 hw.cpusubtype: 2 hw.cputype: 16777228 hw.ephemeral_storage: 0 hw.l1dcachesize: 65536 hw.l1icachesize: 131072 hw.l2cachesize: 4194304 hw.logicalcpu: 8 hw.logicalcpu_max: 8 hw.osenvironment: hw.packages: 1 hw.pagesize: 16384 hw.pagesize32: 16384 hw.physicalcpu: 8 hw.physicalcpu_max: 8 hw.serialdebugmode: 0 hw.tbfrequency: 24000000 hw.use_kernelmanagerd: 1 hw.use_recovery_securityd: 0 hw.targettype: J313 machdep.cpu.brand_string: Apple M1 machdep.cpu.core_count: 8 machdep.cpu.cores_per_package: 8 machdep.cpu.logical_per_package: 8 machdep.cpu.thread_count: 8 machdep.user_idle_level: 0 machdep.deferred_ipi_timeout: 64000 machdep.lck_mtx_adaptive_spin_mode: 1 machdep.time_since_reset: 348621402824 machdep.virtual_address_size: 47 machdep.wake_abstime: 15345477253179 machdep.wake_conttime: 48851161504410 security.mac.platform_exec_logging: 0 security.mac.device_enforce: 1 security.mac.labelvnodes: 1 security.mac.max_slots: 7 security.mac.pipe_enforce: 1 security.mac.posixsem_enforce: 1 security.mac.posixshm_enforce: 1 security.mac.proc_enforce: 1 security.mac.socket_enforce: 1 security.mac.system_enforce: 1 security.mac.sysvmsg_enforce: 1 security.mac.sysvsem_enforce: 1 security.mac.sysvshm_enforce: 1 security.mac.vm_enforce: 1 security.mac.vnode_enforce: 1 security.mac.vnode_label_count: 21818 security.mac.amfi.force_policy: 0 security.mac.amfi.verbose_logging: 0 security.mac.amfi.hsp_enable: 1 security.mac.amfi.allow_only_platform_code: 0 security.mac.amfi.platform_policy: 1 security.mac.amfi.unsigned_code_policy: 1 security.mac.amfi.forced_cs_kill: 1 security.mac.endpointsecurity.log_level: 1 security.mac.endpointsecurity.panic_on_soft_fail: 0 security.mac.sandbox.audio_active: 0 security.mac.sandbox.sentinel: .sb-cee0ec70 security.mac.qtn.sandbox_enforce: 1 security.mac.qtn.user_approved_exec: 1 security.mac.asp.active_rule_version: 10415043430518216312 security.mac.asp.logging_mode: 0 security.mac.asp.policy.change_scans: 1 security.mac.asp.policy.gatekeeper_enabled: 1 security.mac.asp.policy.strict_sip: 0 security.mac.asp.stats.cache_entry_count: 1674 security.mac.asp.stats.cache_allocation_count: 7498 security.mac.asp.stats.cache_release_count: 5824 security.mac.asp.stats.exec_hook_work_time: 5059465 security.mac.asp.stats.exec_hook_sleep_time: 158389096 security.mac.asp.stats.exec_hook_count: 1106094 security.mac.asp.stats.library_hook_time: 2672056 security.mac.asp.stats.library_sleep_time: 38897582 security.mac.asp.stats.library_hook_count: 2050539 security.mac.asp.stats.pending_evaluation_count: 0 audit.session.member_clear_sflags_mask: 16384 audit.session.member_set_sflags_mask: 0 audit.session.superuser_clear_sflags_mask: 24576 audit.session.superuser_set_sflags_mask: 24576 kperf.limits.timer_min_bg_period_ns: 1000000 kperf.limits.timer_min_bg_pet_period_ns: 10000000 kperf.limits.timer_min_period_ns: 50000 kperf.limits.timer_min_pet_period_ns: 2000000 kperf.debug_level: 0 ktrace.background_pid: 34343 ktrace.configured_by: tailspind ktrace.owning_pid: 34343 ktrace.state: 2 ============================================================================================= TESTING: checkCompilerMacros from config.compilerFlags(config/BuildSystem/config/compilerFlags.py:164) Save the list of CPP macros defined by the C and C++ compiler, does not work for all compilers Executing: gcc -c -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags/conftest.c -E -dM stdout: #define _LP64 1 #define __AARCH64EL__ 1 #define __AARCH64_CMODEL_SMALL__ 1 #define __AARCH64_SIMD__ 1 #define __APPLE_CC__ 6000 #define __APPLE__ 1 #define __ARM64_ARCH_8__ 1 #define __ARM_64BIT_STATE 1 #define __ARM_ACLE 200 #define __ARM_ALIGN_MAX_STACK_PWR 4 #define __ARM_ARCH 8 #define __ARM_ARCH_8_3__ 1 #define __ARM_ARCH_ISA_A64 1 #define __ARM_ARCH_PROFILE 'A' #define __ARM_FEATURE_CLZ 1 #define __ARM_FEATURE_COMPLEX 1 #define __ARM_FEATURE_CRC32 1 #define __ARM_FEATURE_CRYPTO 1 #define __ARM_FEATURE_DIRECTED_ROUNDING 1 #define __ARM_FEATURE_DIV 1 #define __ARM_FEATURE_FMA 1 #define __ARM_FEATURE_FP16_SCALAR_ARITHMETIC 1 #define __ARM_FEATURE_FP16_VECTOR_ARITHMETIC 1 #define __ARM_FEATURE_IDIV 1 #define __ARM_FEATURE_JCVT 1 #define __ARM_FEATURE_LDREX 0xF #define __ARM_FEATURE_NUMERIC_MAXMIN 1 #define __ARM_FEATURE_QRDMX 1 #define __ARM_FEATURE_UNALIGNED 1 #define __ARM_FP 0xE #define __ARM_FP16_ARGS 1 #define __ARM_FP16_FORMAT_IEEE 1 #define __ARM_NEON 1 #define __ARM_NEON_FP 0xE #define __ARM_NEON__ 1 #define __ARM_PCS_AAPCS64 1 #define __ARM_SIZEOF_MINIMAL_ENUM 4 #define __ARM_SIZEOF_WCHAR_T 4 #define __ATOMIC_ACQUIRE 2 #define __ATOMIC_ACQ_REL 4 #define __ATOMIC_CONSUME 1 #define __ATOMIC_RELAXED 0 #define __ATOMIC_RELEASE 3 #define __ATOMIC_SEQ_CST 5 #define __BIGGEST_ALIGNMENT__ 8 #define __BLOCKS__ 1 #define __BYTE_ORDER__ __ORDER_LITTLE_ENDIAN__ #define __CHAR16_TYPE__ unsigned short #define __CHAR32_TYPE__ unsigned int #define __CHAR_BIT__ 8 #define __CLANG_ATOMIC_BOOL_LOCK_FREE 2 #define __CLANG_ATOMIC_CHAR16_T_LOCK_FREE 2 #define __CLANG_ATOMIC_CHAR32_T_LOCK_FREE 2 #define __CLANG_ATOMIC_CHAR_LOCK_FREE 2 #define __CLANG_ATOMIC_INT_LOCK_FREE 2 #define __CLANG_ATOMIC_LLONG_LOCK_FREE 2 #define __CLANG_ATOMIC_LONG_LOCK_FREE 2 #define __CLANG_ATOMIC_POINTER_LOCK_FREE 2 #define __CLANG_ATOMIC_SHORT_LOCK_FREE 2 #define __CLANG_ATOMIC_WCHAR_T_LOCK_FREE 2 #define __CONSTANT_CFSTRINGS__ 1 #define __DBL_DECIMAL_DIG__ 17 #define __DBL_DENORM_MIN__ 4.9406564584124654e-324 #define __DBL_DIG__ 15 #define __DBL_EPSILON__ 2.2204460492503131e-16 #define __DBL_HAS_DENORM__ 1 #define __DBL_HAS_INFINITY__ 1 #define __DBL_HAS_QUIET_NAN__ 1 #define __DBL_MANT_DIG__ 53 #define __DBL_MAX_10_EXP__ 308 #define __DBL_MAX_EXP__ 1024 #define __DBL_MAX__ 1.7976931348623157e+308 #define __DBL_MIN_10_EXP__ (-307) #define __DBL_MIN_EXP__ (-1021) #define __DBL_MIN__ 2.2250738585072014e-308 #define __DECIMAL_DIG__ __LDBL_DECIMAL_DIG__ #define __DYNAMIC__ 1 #define __ENVIRONMENT_MAC_OS_X_VERSION_MIN_REQUIRED__ 110000 #define __ENVIRONMENT_OS_VERSION_MIN_REQUIRED__ 110000 #define __FINITE_MATH_ONLY__ 0 #define __FLT16_DECIMAL_DIG__ 5 #define __FLT16_DENORM_MIN__ 5.9604644775390625e-8F16 #define __FLT16_DIG__ 3 #define __FLT16_EPSILON__ 9.765625e-4F16 #define __FLT16_HAS_DENORM__ 1 #define __FLT16_HAS_INFINITY__ 1 #define __FLT16_HAS_QUIET_NAN__ 1 #define __FLT16_MANT_DIG__ 11 #define __FLT16_MAX_10_EXP__ 4 #define __FLT16_MAX_EXP__ 16 #define __FLT16_MAX__ 6.5504e+4F16 #define __FLT16_MIN_10_EXP__ (-4) #define __FLT16_MIN_EXP__ (-13) #define __FLT16_MIN__ 6.103515625e-5F16 #define __FLT_DECIMAL_DIG__ 9 #define __FLT_DENORM_MIN__ 1.40129846e-45F #define __FLT_DIG__ 6 #define __FLT_EPSILON__ 1.19209290e-7F #define __FLT_EVAL_METHOD__ 0 #define __FLT_HAS_DENORM__ 1 #define __FLT_HAS_INFINITY__ 1 #define __FLT_HAS_QUIET_NAN__ 1 #define __FLT_MANT_DIG__ 24 #define __FLT_MAX_10_EXP__ 38 #define __FLT_MAX_EXP__ 128 #define __FLT_MAX__ 3.40282347e+38F #define __FLT_MIN_10_EXP__ (-37) #define __FLT_MIN_EXP__ (-125) #define __FLT_MIN__ 1.17549435e-38F #define __FLT_RADIX__ 2 #define __GCC_ATOMIC_BOOL_LOCK_FREE 2 #define __GCC_ATOMIC_CHAR16_T_LOCK_FREE 2 #define __GCC_ATOMIC_CHAR32_T_LOCK_FREE 2 #define __GCC_ATOMIC_CHAR_LOCK_FREE 2 #define __GCC_ATOMIC_INT_LOCK_FREE 2 #define __GCC_ATOMIC_LLONG_LOCK_FREE 2 #define __GCC_ATOMIC_LONG_LOCK_FREE 2 #define __GCC_ATOMIC_POINTER_LOCK_FREE 2 #define __GCC_ATOMIC_SHORT_LOCK_FREE 2 #define __GCC_ATOMIC_TEST_AND_SET_TRUEVAL 1 #define __GCC_ATOMIC_WCHAR_T_LOCK_FREE 2 #define __GCC_HAVE_SYNC_COMPARE_AND_SWAP_1 1 #define __GCC_HAVE_SYNC_COMPARE_AND_SWAP_2 1 #define __GCC_HAVE_SYNC_COMPARE_AND_SWAP_4 1 #define __GCC_HAVE_SYNC_COMPARE_AND_SWAP_8 1 #define __GNUC_MINOR__ 2 #define __GNUC_PATCHLEVEL__ 1 #define __GNUC_STDC_INLINE__ 1 #define __GNUC__ 4 #define __GXX_ABI_VERSION 1002 #define __INT16_C_SUFFIX__ #define __INT16_FMTd__ "hd" #define __INT16_FMTi__ "hi" #define __INT16_MAX__ 32767 #define __INT16_TYPE__ short #define __INT32_C_SUFFIX__ #define __INT32_FMTd__ "d" #define __INT32_FMTi__ "i" #define __INT32_MAX__ 2147483647 #define __INT32_TYPE__ int #define __INT64_C_SUFFIX__ LL #define __INT64_FMTd__ "lld" #define __INT64_FMTi__ "lli" #define __INT64_MAX__ 9223372036854775807LL #define __INT64_TYPE__ long long int #define __INT8_C_SUFFIX__ #define __INT8_FMTd__ "hhd" #define __INT8_FMTi__ "hhi" #define __INT8_MAX__ 127 #define __INT8_TYPE__ signed char #define __INTMAX_C_SUFFIX__ L #define __INTMAX_FMTd__ "ld" #define __INTMAX_FMTi__ "li" #define __INTMAX_MAX__ 9223372036854775807L #define __INTMAX_TYPE__ long int #define __INTMAX_WIDTH__ 64 #define __INTPTR_FMTd__ "ld" #define __INTPTR_FMTi__ "li" #define __INTPTR_MAX__ 9223372036854775807L #define __INTPTR_TYPE__ long int #define __INTPTR_WIDTH__ 64 #define __INT_FAST16_FMTd__ "hd" #define __INT_FAST16_FMTi__ "hi" #define __INT_FAST16_MAX__ 32767 #define __INT_FAST16_TYPE__ short #define __INT_FAST32_FMTd__ "d" #define __INT_FAST32_FMTi__ "i" #define __INT_FAST32_MAX__ 2147483647 #define __INT_FAST32_TYPE__ int #define __INT_FAST64_FMTd__ "lld" #define __INT_FAST64_FMTi__ "lli" #define __INT_FAST64_MAX__ 9223372036854775807LL #define __INT_FAST64_TYPE__ long long int #define __INT_FAST8_FMTd__ "hhd" #define __INT_FAST8_FMTi__ "hhi" #define __INT_FAST8_MAX__ 127 #define __INT_FAST8_TYPE__ signed char #define __INT_LEAST16_FMTd__ "hd" #define __INT_LEAST16_FMTi__ "hi" #define __INT_LEAST16_MAX__ 32767 #define __INT_LEAST16_TYPE__ short #define __INT_LEAST32_FMTd__ "d" #define __INT_LEAST32_FMTi__ "i" #define __INT_LEAST32_MAX__ 2147483647 #define __INT_LEAST32_TYPE__ int #define __INT_LEAST64_FMTd__ "lld" #define __INT_LEAST64_FMTi__ "lli" #define __INT_LEAST64_MAX__ 9223372036854775807LL #define __INT_LEAST64_TYPE__ long long int #define __INT_LEAST8_FMTd__ "hhd" #define __INT_LEAST8_FMTi__ "hhi" #define __INT_LEAST8_MAX__ 127 #define __INT_LEAST8_TYPE__ signed char #define __INT_MAX__ 2147483647 #define __LDBL_DECIMAL_DIG__ 17 #define __LDBL_DENORM_MIN__ 4.9406564584124654e-324L #define __LDBL_DIG__ 15 #define __LDBL_EPSILON__ 2.2204460492503131e-16L #define __LDBL_HAS_DENORM__ 1 #define __LDBL_HAS_INFINITY__ 1 #define __LDBL_HAS_QUIET_NAN__ 1 #define __LDBL_MANT_DIG__ 53 #define __LDBL_MAX_10_EXP__ 308 #define __LDBL_MAX_EXP__ 1024 #define __LDBL_MAX__ 1.7976931348623157e+308L #define __LDBL_MIN_10_EXP__ (-307) #define __LDBL_MIN_EXP__ (-1021) #define __LDBL_MIN__ 2.2250738585072014e-308L #define __LITTLE_ENDIAN__ 1 #define __LONG_LONG_MAX__ 9223372036854775807LL #define __LONG_MAX__ 9223372036854775807L #define __LP64__ 1 #define __MACH__ 1 #define __NO_INLINE__ 1 #define __OBJC_BOOL_IS_BOOL 1 #define __OPENCL_MEMORY_SCOPE_ALL_SVM_DEVICES 3 #define __OPENCL_MEMORY_SCOPE_DEVICE 2 #define __OPENCL_MEMORY_SCOPE_SUB_GROUP 4 #define __OPENCL_MEMORY_SCOPE_WORK_GROUP 1 #define __OPENCL_MEMORY_SCOPE_WORK_ITEM 0 #define __ORDER_BIG_ENDIAN__ 4321 #define __ORDER_LITTLE_ENDIAN__ 1234 #define __ORDER_PDP_ENDIAN__ 3412 #define __PIC__ 2 #define __POINTER_WIDTH__ 64 #define __PRAGMA_REDEFINE_EXTNAME 1 #define __PTRDIFF_FMTd__ "ld" #define __PTRDIFF_FMTi__ "li" #define __PTRDIFF_MAX__ 9223372036854775807L #define __PTRDIFF_TYPE__ long int #define __PTRDIFF_WIDTH__ 64 #define __REGISTER_PREFIX__ #define __SCHAR_MAX__ 127 #define __SHRT_MAX__ 32767 #define __SIG_ATOMIC_MAX__ 2147483647 #define __SIG_ATOMIC_WIDTH__ 32 #define __SIZEOF_DOUBLE__ 8 #define __SIZEOF_FLOAT__ 4 #define __SIZEOF_INT128__ 16 #define __SIZEOF_INT__ 4 #define __SIZEOF_LONG_DOUBLE__ 8 #define __SIZEOF_LONG_LONG__ 8 #define __SIZEOF_LONG__ 8 #define __SIZEOF_POINTER__ 8 #define __SIZEOF_PTRDIFF_T__ 8 #define __SIZEOF_SHORT__ 2 #define __SIZEOF_SIZE_T__ 8 #define __SIZEOF_WCHAR_T__ 4 #define __SIZEOF_WINT_T__ 4 #define __SIZE_FMTX__ "lX" #define __SIZE_FMTo__ "lo" #define __SIZE_FMTu__ "lu" #define __SIZE_FMTx__ "lx" #define __SIZE_MAX__ 18446744073709551615UL #define __SIZE_TYPE__ long unsigned int #define __SIZE_WIDTH__ 64 #define __SSP__ 1 #define __STDC_HOSTED__ 1 #define __STDC_NO_THREADS__ 1 #define __STDC_UTF_16__ 1 #define __STDC_UTF_32__ 1 #define __STDC_VERSION__ 201710L #define __STDC__ 1 #define __UINT16_C_SUFFIX__ #define __UINT16_FMTX__ "hX" #define __UINT16_FMTo__ "ho" #define __UINT16_FMTu__ "hu" #define __UINT16_FMTx__ "hx" #define __UINT16_MAX__ 65535 #define __UINT16_TYPE__ unsigned short #define __UINT32_C_SUFFIX__ U #define __UINT32_FMTX__ "X" #define __UINT32_FMTo__ "o" #define __UINT32_FMTu__ "u" #define __UINT32_FMTx__ "x" #define __UINT32_MAX__ 4294967295U #define __UINT32_TYPE__ unsigned int #define __UINT64_C_SUFFIX__ ULL #define __UINT64_FMTX__ "llX" #define __UINT64_FMTo__ "llo" #define __UINT64_FMTu__ "llu" #define __UINT64_FMTx__ "llx" #define __UINT64_MAX__ 18446744073709551615ULL #define __UINT64_TYPE__ long long unsigned int #define __UINT8_C_SUFFIX__ #define __UINT8_FMTX__ "hhX" #define __UINT8_FMTo__ "hho" #define __UINT8_FMTu__ "hhu" #define __UINT8_FMTx__ "hhx" #define __UINT8_MAX__ 255 #define __UINT8_TYPE__ unsigned char #define __UINTMAX_C_SUFFIX__ UL #define __UINTMAX_FMTX__ "lX" #define __UINTMAX_FMTo__ "lo" #define __UINTMAX_FMTu__ "lu" #define __UINTMAX_FMTx__ "lx" #define __UINTMAX_MAX__ 18446744073709551615UL #define __UINTMAX_TYPE__ long unsigned int #define __UINTMAX_WIDTH__ 64 #define __UINTPTR_FMTX__ "lX" #define __UINTPTR_FMTo__ "lo" #define __UINTPTR_FMTu__ "lu" #define __UINTPTR_FMTx__ "lx" #define __UINTPTR_MAX__ 18446744073709551615UL #define __UINTPTR_TYPE__ long unsigned int #define __UINTPTR_WIDTH__ 64 #define __UINT_FAST16_FMTX__ "hX" #define __UINT_FAST16_FMTo__ "ho" #define __UINT_FAST16_FMTu__ "hu" #define __UINT_FAST16_FMTx__ "hx" #define __UINT_FAST16_MAX__ 65535 #define __UINT_FAST16_TYPE__ unsigned short #define __UINT_FAST32_FMTX__ "X" #define __UINT_FAST32_FMTo__ "o" #define __UINT_FAST32_FMTu__ "u" #define __UINT_FAST32_FMTx__ "x" #define __UINT_FAST32_MAX__ 4294967295U #define __UINT_FAST32_TYPE__ unsigned int #define __UINT_FAST64_FMTX__ "llX" #define __UINT_FAST64_FMTo__ "llo" #define __UINT_FAST64_FMTu__ "llu" #define __UINT_FAST64_FMTx__ "llx" #define __UINT_FAST64_MAX__ 18446744073709551615ULL #define __UINT_FAST64_TYPE__ long long unsigned int #define __UINT_FAST8_FMTX__ "hhX" #define __UINT_FAST8_FMTo__ "hho" #define __UINT_FAST8_FMTu__ "hhu" #define __UINT_FAST8_FMTx__ "hhx" #define __UINT_FAST8_MAX__ 255 #define __UINT_FAST8_TYPE__ unsigned char #define __UINT_LEAST16_FMTX__ "hX" #define __UINT_LEAST16_FMTo__ "ho" #define __UINT_LEAST16_FMTu__ "hu" #define __UINT_LEAST16_FMTx__ "hx" #define __UINT_LEAST16_MAX__ 65535 #define __UINT_LEAST16_TYPE__ unsigned short #define __UINT_LEAST32_FMTX__ "X" #define __UINT_LEAST32_FMTo__ "o" #define __UINT_LEAST32_FMTu__ "u" #define __UINT_LEAST32_FMTx__ "x" #define __UINT_LEAST32_MAX__ 4294967295U #define __UINT_LEAST32_TYPE__ unsigned int #define __UINT_LEAST64_FMTX__ "llX" #define __UINT_LEAST64_FMTo__ "llo" #define __UINT_LEAST64_FMTu__ "llu" #define __UINT_LEAST64_FMTx__ "llx" #define __UINT_LEAST64_MAX__ 18446744073709551615ULL #define __UINT_LEAST64_TYPE__ long long unsigned int #define __UINT_LEAST8_FMTX__ "hhX" #define __UINT_LEAST8_FMTo__ "hho" #define __UINT_LEAST8_FMTu__ "hhu" #define __UINT_LEAST8_FMTx__ "hhx" #define __UINT_LEAST8_MAX__ 255 #define __UINT_LEAST8_TYPE__ unsigned char #define __USER_LABEL_PREFIX__ _ #define __VERSION__ "Apple LLVM 12.0.5 (clang-1205.0.22.11)" #define __WCHAR_MAX__ 2147483647 #define __WCHAR_TYPE__ int #define __WCHAR_WIDTH__ 32 #define __WINT_MAX__ 2147483647 #define __WINT_TYPE__ int #define __WINT_WIDTH__ 32 #define __aarch64__ 1 #define __apple_build_version__ 12050022 #define __arm64 1 #define __arm64__ 1 #define __block __attribute__((__blocks__(byref))) #define __clang__ 1 #define __clang_major__ 12 #define __clang_minor__ 0 #define __clang_patchlevel__ 5 #define __clang_version__ "12.0.5 (clang-1205.0.22.11)" #define __llvm__ 1 #define __nonnull _Nonnull #define __null_unspecified _Null_unspecified #define __nullable _Nullable #define __pic__ 2 #define __strong #define __unsafe_unretained #define __weak __attribute__((objc_gc(weak))) child config.compilerFlags took 0.659625 seconds Executing: gcc --help | head -n 20 stdout: OVERVIEW: clang LLVM compiler USAGE: clang [options] file... OPTIONS: -### Print (but do not run) the commands to run for this compilation --analyzer-output Static analyzer report output format (html|plist|plist-multi-file|plist-html|sarif|text). --analyze Run the static analyzer -arcmt-migrate-emit-errors Emit ARC errors even if the migrator can fix them -arcmt-migrate-report-output Output path for the plist report -B Add to search path for binaries and object files used implicitly -CC Include comments from within macros in preprocessed output -cl-denorms-are-zero OpenCL only. Allow denormals to be flushed to zero. -cl-fast-relaxed-math OpenCL only. Sets -cl-finite-math-only and -cl-unsafe-math-optimizations, and defines __FAST_RELAXED_MATH__. -cl-finite-math-only OpenCL only. Allow floating-point optimizations that assume arguments and results are not NaNs or +-Inf. -cl-fp32-correctly-rounded-divide-sqrt OpenCL only. Specify that single precision floating-point divide and sqrt used in the program source are correctly rounded. ============================================================================================= TESTING: checkC99Flag from config.compilers(config/BuildSystem/config/compilers.py:1374) Check for -std=c99 or equivalent flag Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { float x[2],y; float *restrict z = &y; y = FLT_ROUNDS; // c++ comment int j = 2; for (int i=0; i<2; i++){ x[i] = i*j*(*z); } ; return 0; } Output from compiling with -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 Accepted C99 compile flag: ============================================================================================= TESTING: checkCFormatting from config.compilers(config/BuildSystem/config/compilers.py:359) Activate format string checking if using the GNU compilers ============================================================================================= TESTING: checkDynamicLoadFlag from config.compilers(config/BuildSystem/config/compilers.py:370) Checks that dlopen() takes RTLD_XXX, and defines PETSC_HAVE_RTLD_XXX if it does ===== Checking linker Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include char *libname; int main() { dlopen(libname, RTLD_LAZY);dlopen(libname, RTLD_NOW);dlopen(libname, RTLD_LOCAL);dlopen(libname, RTLD_GLOBAL); ; return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -ldl Defined "HAVE_RTLD_LAZY" to "1" Defined "HAVE_RTLD_NOW" to "1" Defined "HAVE_RTLD_LOCAL" to "1" Defined "HAVE_RTLD_GLOBAL" to "1" ============================================================================================= TESTING: checkCLibraries from config.compilers(config/BuildSystem/config/compilers.py:162) Determines the libraries needed to link with C compiled code ===== Checking compiler Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include void asub(void) {char s[16];printf("testing %s",s);} ===== Checking linker Executing: gfortran -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -fPIC -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.F90 Successful compile: Source: program main print*,'testing' stop end Executing: gfortran -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/confc.o -ldl C libraries are not needed when using Fortran linker ============================================================================================= TESTING: checkDependencyGenerationFlag from config.compilers(config/BuildSystem/config/compilers.py:1325) Check if -MMD works for dependency generation, and add it if it does Trying C compiler flag -MMD -MP Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 -MMD -MP /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Output from compiling with -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 -MMD -MP Defined make macro "C_DEPFLAGS" to "-MMD -MP" ============================================================================================= TESTING: checkFortranNameMangling from config.compilers(config/BuildSystem/config/compilers.py:787) Checks Fortran name mangling, and defines HAVE_FORTRAN_UNDERSCORE, HAVE_FORTRAN_NOUNDERSCORE, HAVE_FORTRAN_CAPS Testing Fortran mangling type underscore with code void d1chk_(void){return;} ===== Checking compiler Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" void d1chk_(void){return;} ===== Checking linker Executing: gfortran -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -fPIC -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.F90 Successful compile: Source: program main call d1chk() end Executing: gfortran -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/confc.o -ldl compilers: Fortran name mangling is underscore Defined "HAVE_FORTRAN_UNDERSCORE" to "1" Executing: gfortran --version stdout: GNU Fortran (Homebrew GCC 11.2.0_3) 11.2.0 Copyright (C) 2021 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. Detected GFortran8plus compiler Defined "FORTRAN_CHARLEN_T" to "size_t" ============================================================================================= TESTING: checkFortranNameManglingDouble from config.compilers(config/BuildSystem/config/compilers.py:825) Checks if symbols containing an underscore append an extra underscore, and defines HAVE_FORTRAN_UNDERSCORE_UNDERSCORE if necessary ===== Checking compiler Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" void d1_chk__(void){return;} ===== Checking linker Executing: gfortran -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -fPIC -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.F90 Successful compile: Source: program main call d1_chk() end Executing: gfortran -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/confc.o -ldl Possible ERROR while running linker: exit code 1 stderr: Undefined symbols for architecture arm64: "_d1_chk_", referenced from: _MAIN__ in conftest.o (maybe you meant: _d1_chk__) ld: symbol(s) not found for architecture arm64 collect2: error: ld returned 1 exit status Linker output before filtering: Undefined symbols for architecture arm64: "_d1_chk_", referenced from: _MAIN__ in conftest.o (maybe you meant: _d1_chk__) ld: symbol(s) not found for architecture arm64 collect2: error: ld returned 1 exit status : Linker output after filtering: Undefined symbols for architecture arm64: "_d1_chk_", referenced from: _MAIN__ in conftest.o (maybe you meant: _d1_chk__) ld: symbol(s) not found for architecture arm64 collect2: error: ld returned 1 exit status: ============================================================================================= TESTING: checkFortranLibraries from config.compilers(config/BuildSystem/config/compilers.py:835) Substitutes for FLIBS the libraries needed to link with Fortran This macro is intended to be used in those situations when it is necessary to mix, e.g. C++ and Fortran 77, source code into a single program or shared library. For example, if object files from a C++ and Fortran 77 compiler must be linked together, then the C++ compiler/linker must be used for linking (since special C++-ish things need to happen at link time like calling global constructors, instantiating templates, enabling exception support, etc.). However, the Fortran 77 intrinsic and run-time libraries must be linked in as well, but the C++ compiler/linker does not know how to add these Fortran 77 libraries. This code was translated from the autoconf macro which was packaged in its current form by Matthew D. Langston . However, nearly all of this macro came from the OCTAVE_FLIBS macro in octave-2.0.13/aclocal.m4, and full credit should go to John W. Eaton for writing this extremely useful macro. ===== Checking linker Executing: gfortran -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -fPIC -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.F90 Possible ERROR while running compiler: exit code 1 stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.F90:2:11: 2 | use mpi | 1 Fatal Error: Cannot open module file 'mpi.mod' for reading at (1): No such file or directory compilation terminated. Source: program main use mpi call MPI_Allreduce() end Compile failed inside link ===== Checking linker Executing: gfortran -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -fPIC -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.F90 Possible ERROR while running compiler: exit code 1 stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.F90:3:2: 3 | call MPI_Allreduce() | 1 ~~~ Fatal Error: mpif.h: No such file or directory compilation terminated. Source: program main #include call MPI_Allreduce() end Compile failed inside link ===== Checking compiler Executing: gfortran -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -fPIC -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.F90 Successful compile: Source: subroutine asub() print*,'testing' return end ===== Checking linker Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" extern void asub_(void); int main(int argc,char **args) { asub_(); return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/confc.o -ldl Possible ERROR while running linker: exit code 1 stderr: ld: warning: object file (/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/confc.o) was built for newer macOS version (11.5) than being linked (11.0) Undefined symbols for architecture arm64: "__gfortran_st_write", referenced from: _asub_ in confc.o "__gfortran_st_write_done", referenced from: _asub_ in confc.o "__gfortran_transfer_character_write", referenced from: _asub_ in confc.o ld: symbol(s) not found for architecture arm64 clang: error: linker command failed with exit code 1 (use -v to see invocation) Linker output before filtering: ld: warning: object file (/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/confc.o) was built for newer macOS version (11.5) than being linked (11.0) Undefined symbols for architecture arm64: "__gfortran_st_write", referenced from: _asub_ in confc.o "__gfortran_st_write_done", referenced from: _asub_ in confc.o "__gfortran_transfer_character_write", referenced from: _asub_ in confc.o ld: symbol(s) not found for architecture arm64 clang: error: linker command failed with exit code 1 (use -v to see invocation) : Linker output after filtering: Undefined symbols for architecture arm64: "__gfortran_st_write", referenced from: _asub_ in confc.o "__gfortran_st_write_done", referenced from: _asub_ in confc.o "__gfortran_transfer_character_write", referenced from: _asub_ in confc.o ld: symbol(s) not found for architecture arm64 clang: error: linker command failed with exit code 1 (use -v to see invocation): Fortran code cannot directly be linked with C linker, therefore will determine needed Fortran libraries Executing: gfortran -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -fPIC -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.F90 Successful compile: Source: program main end Executing: gfortran -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest -v -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -ldl Possible ERROR while running linker: stderr: Driving: gfortran -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest -v -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -ldl -mmacosx-version-min=11.5.0 -asm_macosx_version_min=11.5 -l gfortran Using built-in specs. COLLECT_GCC=gfortran COLLECT_LTO_WRAPPER=/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../libexec/gcc/aarch64-apple-darwin20/11/lto-wrapper Target: aarch64-apple-darwin20 Configured with: ../configure --prefix=/opt/homebrew/opt/gcc --libdir=/opt/homebrew/opt/gcc/lib/gcc/11 --disable-nls --enable-checking=release --with-gcc-major-version-only --enable-languages=c,c++,objc,obj-c++,fortran --program-suffix=-11 --with-gmp=/opt/homebrew/opt/gmp --with-mpfr=/opt/homebrew/opt/mpfr --with-mpc=/opt/homebrew/opt/libmpc --with-isl=/opt/homebrew/opt/isl --with-zstd=/opt/homebrew/opt/zstd --with-pkgversion='Homebrew GCC 11.2.0_3' --with-bugurl=https://github.com/Homebrew/homebrew-core/issues --build=aarch64-apple-darwin20 --with-system-zlib --with-native-system-header-dir=/usr/include --with-sysroot=/Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk Thread model: posix Supported LTO compression algorithms: zlib zstd gcc version 11.2.0 (Homebrew GCC 11.2.0_3) Reading specs from /opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11/../../../libgfortran.spec rename spec lib to liborig COLLECT_GCC_OPTIONS='-o' '/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest' '-v' '-fPIC' '-Wall' '-ffree-line-length-0' '-Wno-unused-dummy-argument' '-g' '-O0' '-mmacosx-version-min=11.5.0' '-asm_macosx_version_min=11.5' '-mlittle-endian' '-mabi=lp64' '-dumpdir' '/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/' COMPILER_PATH=/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../libexec/gcc/aarch64-apple-darwin20/11/:/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../libexec/gcc/ LIBRARY_PATH=/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11/:/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/:/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11/../../../ COLLECT_GCC_OPTIONS='-o' '/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest' '-v' '-fPIC' '-Wall' '-ffree-line-length-0' '-Wno-unused-dummy-argument' '-g' '-O0' '-mmacosx-version-min=11.5.0' '-asm_macosx_version_min=11.5' '-mlittle-endian' '-mabi=lp64' '-dumpdir' '/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.' /opt/homebrew/Cellar/gcc/11.2.0_3/bin/../libexec/gcc/aarch64-apple-darwin20/11/collect2 -syslibroot /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/ -dynamic -arch arm64 -macosx_version_min 11.5.0 -weak_reference_mismatches non-weak -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest -L/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11 -L/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc -L/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11/../../.. -bind_at_load -multiply_defined suppress -multiply_defined suppress -commons use_dylibs -search_paths_first -no_compact_unwind /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -lgfortran -lgcc_s.1.1 -lgcc -lm -lgcc_s.1.1 -lgcc -lSystem -lgcc -no_compact_unwind -rpath @loader_path -rpath /opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11 -rpath /opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc -rpath /opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11/../../.. -v -idsym collect2 version 11.2.0 /usr/bin/ld -syslibroot /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/ -dynamic -arch arm64 -macosx_version_min 11.5.0 -weak_reference_mismatches non-weak -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest -L/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11 -L/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc -L/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11/../../.. -bind_at_load -multiply_defined suppress -multiply_defined suppress -commons use_dylibs -search_paths_first -no_compact_unwind /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -lgfortran -lgcc_s.1.1 -lgcc -lm -lgcc_s.1.1 -lgcc -lSystem -lgcc -no_compact_unwind -rpath @loader_path -rpath /opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11 -rpath /opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc -rpath /opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11/../../.. -v @(#)PROGRAM:ld PROJECT:ld64-650.9 BUILD 13:09:13 May 28 2021 configured to support archs: armv6 armv7 armv7s arm64 arm64e arm64_32 i386 x86_64 x86_64h armv6m armv7k armv7m armv7em Library search paths: /opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 /opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc /opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/lib Framework search paths: /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/System/Library/Frameworks/ Linker output before filtering: Driving: gfortran -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest -v -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -ldl -mmacosx-version-min=11.5.0 -asm_macosx_version_min=11.5 -l gfortran Using built-in specs. COLLECT_GCC=gfortran COLLECT_LTO_WRAPPER=/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../libexec/gcc/aarch64-apple-darwin20/11/lto-wrapper Target: aarch64-apple-darwin20 Configured with: ../configure --prefix=/opt/homebrew/opt/gcc --libdir=/opt/homebrew/opt/gcc/lib/gcc/11 --disable-nls --enable-checking=release --with-gcc-major-version-only --enable-languages=c,c++,objc,obj-c++,fortran --program-suffix=-11 --with-gmp=/opt/homebrew/opt/gmp --with-mpfr=/opt/homebrew/opt/mpfr --with-mpc=/opt/homebrew/opt/libmpc --with-isl=/opt/homebrew/opt/isl --with-zstd=/opt/homebrew/opt/zstd --with-pkgversion='Homebrew GCC 11.2.0_3' --with-bugurl=https://github.com/Homebrew/homebrew-core/issues --build=aarch64-apple-darwin20 --with-system-zlib --with-native-system-header-dir=/usr/include --with-sysroot=/Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk Thread model: posix Supported LTO compression algorithms: zlib zstd gcc version 11.2.0 (Homebrew GCC 11.2.0_3) Reading specs from /opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11/../../../libgfortran.spec rename spec lib to liborig COLLECT_GCC_OPTIONS='-o' '/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest' '-v' '-fPIC' '-Wall' '-ffree-line-length-0' '-Wno-unused-dummy-argument' '-g' '-O0' '-mmacosx-version-min=11.5.0' '-asm_macosx_version_min=11.5' '-mlittle-endian' '-mabi=lp64' '-dumpdir' '/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/' COMPILER_PATH=/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../libexec/gcc/aarch64-apple-darwin20/11/:/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../libexec/gcc/ LIBRARY_PATH=/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11/:/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/:/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11/../../../ COLLECT_GCC_OPTIONS='-o' '/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest' '-v' '-fPIC' '-Wall' '-ffree-line-length-0' '-Wno-unused-dummy-argument' '-g' '-O0' '-mmacosx-version-min=11.5.0' '-asm_macosx_version_min=11.5' '-mlittle-endian' '-mabi=lp64' '-dumpdir' '/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.' /opt/homebrew/Cellar/gcc/11.2.0_3/bin/../libexec/gcc/aarch64-apple-darwin20/11/collect2 -syslibroot /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/ -dynamic -arch arm64 -macosx_version_min 11.5.0 -weak_reference_mismatches non-weak -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest -L/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11 -L/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc -L/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11/../../.. -bind_at_load -multiply_defined suppress -multiply_defined suppress -commons use_dylibs -search_paths_first -no_compact_unwind /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -lgfortran -lgcc_s.1.1 -lgcc -lm -lgcc_s.1.1 -lgcc -lSystem -lgcc -no_compact_unwind -rpath @loader_path -rpath /opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11 -rpath /opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc -rpath /opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11/../../.. -v -idsym collect2 version 11.2.0 /usr/bin/ld -syslibroot /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/ -dynamic -arch arm64 -macosx_version_min 11.5.0 -weak_reference_mismatches non-weak -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest -L/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11 -L/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc -L/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11/../../.. -bind_at_load -multiply_defined suppress -multiply_defined suppress -commons use_dylibs -search_paths_first -no_compact_unwind /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -lgfortran -lgcc_s.1.1 -lgcc -lm -lgcc_s.1.1 -lgcc -lSystem -lgcc -no_compact_unwind -rpath @loader_path -rpath /opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11 -rpath /opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc -rpath /opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11/../../.. -v @(#)PROGRAM:ld PROJECT:ld64-650.9 BUILD 13:09:13 May 28 2021 configured to support archs: armv6 armv7 armv7s arm64 arm64e arm64_32 i386 x86_64 x86_64h armv6m armv7k armv7m armv7em Library search paths: /opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 /opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc /opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/lib Framework search paths: /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/System/Library/Frameworks/ : Linker output after filtering: Driving: gfortran -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest -v -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -ldl -mmacosx-version-min=11.5.0 -asm_macosx_version_min=11.5 -l gfortran Using built-in specs. COLLECT_GCC=gfortran COLLECT_LTO_WRAPPER=/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../libexec/gcc/aarch64-apple-darwin20/11/lto-wrapper Target: aarch64-apple-darwin20 Configured with: ../configure --prefix=/opt/homebrew/opt/gcc --libdir=/opt/homebrew/opt/gcc/lib/gcc/11 --disable-nls --enable-checking=release --with-gcc-major-version-only --enable-languages=c,c++,objc,obj-c++,fortran --program-suffix=-11 --with-gmp=/opt/homebrew/opt/gmp --with-mpfr=/opt/homebrew/opt/mpfr --with-mpc=/opt/homebrew/opt/libmpc --with-isl=/opt/homebrew/opt/isl --with-zstd=/opt/homebrew/opt/zstd --with-pkgversion='Homebrew GCC 11.2.0_3' --with-bugurl=https://github.com/Homebrew/homebrew-core/issues --build=aarch64-apple-darwin20 --with-system-zlib --with-native-system-header-dir=/usr/include --with-sysroot=/Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk Thread model: posix Supported LTO compression algorithms: zlib zstd gcc version 11.2.0 (Homebrew GCC 11.2.0_3) Reading specs from /opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11/../../../libgfortran.spec rename spec lib to liborig COLLECT_GCC_OPTIONS='-o' '/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest' '-v' '-fPIC' '-Wall' '-ffree-line-length-0' '-Wno-unused-dummy-argument' '-g' '-O0' '-mmacosx-version-min=11.5.0' '-asm_macosx_version_min=11.5' '-mlittle-endian' '-mabi=lp64' '-dumpdir' '/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/' COMPILER_PATH=/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../libexec/gcc/aarch64-apple-darwin20/11/:/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../libexec/gcc/ LIBRARY_PATH=/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11/:/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/:/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11/../../../ COLLECT_GCC_OPTIONS='-o' '/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest' '-v' '-fPIC' '-Wall' '-ffree-line-length-0' '-Wno-unused-dummy-argument' '-g' '-O0' '-mmacosx-version-min=11.5.0' '-asm_macosx_version_min=11.5' '-mlittle-endian' '-mabi=lp64' '-dumpdir' '/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.' /opt/homebrew/Cellar/gcc/11.2.0_3/bin/../libexec/gcc/aarch64-apple-darwin20/11/collect2 -syslibroot /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/ -dynamic -arch arm64 -macosx_version_min 11.5.0 -weak_reference_mismatches non-weak -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest -L/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11 -L/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc -L/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11/../../.. -bind_at_load -multiply_defined suppress -multiply_defined suppress -commons use_dylibs -search_paths_first -no_compact_unwind /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -lgfortran -lgcc_s.1.1 -lgcc -lm -lgcc_s.1.1 -lgcc -lSystem -lgcc -no_compact_unwind -rpath @loader_path -rpath /opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11 -rpath /opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc -rpath /opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11/../../.. -v -idsym collect2 version 11.2.0 /usr/bin/ld -syslibroot /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/ -dynamic -arch arm64 -macosx_version_min 11.5.0 -weak_reference_mismatches non-weak -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest -L/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11 -L/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc -L/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11/../../.. -bind_at_load -multiply_defined suppress -multiply_defined suppress -commons use_dylibs -search_paths_first -no_compact_unwind /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -lgfortran -lgcc_s.1.1 -lgcc -lm -lgcc_s.1.1 -lgcc -lSystem -lgcc -no_compact_unwind -rpath @loader_path -rpath /opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11 -rpath /opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc -rpath /opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11/../../.. -v @(#)PROGRAM:ld PROJECT:ld64-650.9 BUILD 13:09:13 May 28 2021 configured to support archs: armv6 armv7 armv7s arm64 arm64e arm64_32 i386 x86_64 x86_64h armv6m armv7k armv7m armv7em Library search paths: /opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 /opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc /opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/lib Framework search paths: /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/System/Library/Frameworks/: Executing: gfortran -V compilers: Checking arg Driving: compilers: Unknown arg Driving: compilers: Checking arg gfortran compilers: Unknown arg gfortran compilers: Checking arg -o compilers: Unknown arg -o compilers: Checking arg /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest compilers: Unknown arg /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest compilers: Checking arg -v compilers: Unknown arg -v compilers: Checking arg -Wl,-bind_at_load compilers: Unknown arg -Wl,-bind_at_load compilers: Checking arg -Wl,-multiply_defined,suppress compilers: Unknown arg -Wl,-multiply_defined,suppress compilers: Checking arg -Wl,-multiply_defined compilers: Unknown arg -Wl,-multiply_defined compilers: Checking arg -Wl,suppress compilers: Unknown arg -Wl,suppress compilers: Checking arg -Wl,-commons,use_dylibs compilers: Unknown arg -Wl,-commons,use_dylibs compilers: Checking arg -Wl,-search_paths_first compilers: Unknown arg -Wl,-search_paths_first compilers: Checking arg -Wl,-no_compact_unwind compilers: Unknown arg -Wl,-no_compact_unwind compilers: Checking arg -fPIC compilers: Unknown arg -fPIC compilers: Checking arg -Wall compilers: Unknown arg -Wall compilers: Checking arg -ffree-line-length-0 compilers: Unknown arg -ffree-line-length-0 compilers: Checking arg -Wno-unused-dummy-argument compilers: Unknown arg -Wno-unused-dummy-argument compilers: Checking arg -g compilers: Unknown arg -g compilers: Checking arg -O0 compilers: Unknown arg -O0 compilers: Checking arg /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o compilers: Unknown arg /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o compilers: Checking arg -ldl compilers: Found library: -ldl compilers: Checking arg -mmacosx-version-min=11.5.0 compilers: Unknown arg -mmacosx-version-min=11.5.0 compilers: Checking arg -asm_macosx_version_min=11.5 compilers: Unknown arg -asm_macosx_version_min=11.5 compilers: Checking arg -l compilers: Found canonical library: -lgfortran compilers: Checking arg Using compilers: Unknown arg Using compilers: Checking arg built-in compilers: Unknown arg built-in compilers: Checking arg specs. compilers: Unknown arg specs. compilers: Checking arg COLLECT_GCC=gfortran compilers: Unknown arg COLLECT_GCC=gfortran compilers: Checking arg COLLECT_LTO_WRAPPER=/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../libexec/gcc/aarch64-apple-darwin20/11/lto-wrapper compilers: Unknown arg COLLECT_LTO_WRAPPER=/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../libexec/gcc/aarch64-apple-darwin20/11/lto-wrapper compilers: Checking arg Target: compilers: Unknown arg Target: compilers: Checking arg aarch64-apple-darwin20 compilers: Unknown arg aarch64-apple-darwin20 compilers: Checking arg Configured compilers: Unknown arg Configured compilers: Checking arg with: compilers: Unknown arg with: compilers: Checking arg ../configure compilers: Unknown arg ../configure compilers: Checking arg --prefix=/opt/homebrew/opt/gcc compilers: Unknown arg --prefix=/opt/homebrew/opt/gcc compilers: Checking arg --libdir=/opt/homebrew/opt/gcc/lib/gcc/11 compilers: Unknown arg --libdir=/opt/homebrew/opt/gcc/lib/gcc/11 compilers: Checking arg --disable-nls compilers: Unknown arg --disable-nls compilers: Checking arg --enable-checking=release compilers: Unknown arg --enable-checking=release compilers: Checking arg --with-gcc-major-version-only compilers: Unknown arg --with-gcc-major-version-only compilers: Checking arg --enable-languages=c,c++,objc,obj-c++,fortran compilers: Unknown arg --enable-languages=c,c++,objc,obj-c++,fortran compilers: Checking arg --program-suffix=-11 compilers: Unknown arg --program-suffix=-11 compilers: Checking arg --with-gmp=/opt/homebrew/opt/gmp compilers: Unknown arg --with-gmp=/opt/homebrew/opt/gmp compilers: Checking arg --with-mpfr=/opt/homebrew/opt/mpfr compilers: Unknown arg --with-mpfr=/opt/homebrew/opt/mpfr compilers: Checking arg --with-mpc=/opt/homebrew/opt/libmpc compilers: Unknown arg --with-mpc=/opt/homebrew/opt/libmpc compilers: Checking arg --with-isl=/opt/homebrew/opt/isl compilers: Unknown arg --with-isl=/opt/homebrew/opt/isl compilers: Checking arg --with-zstd=/opt/homebrew/opt/zstd compilers: Unknown arg --with-zstd=/opt/homebrew/opt/zstd compilers: Checking arg --with-pkgversion= compilers: Unknown arg --with-pkgversion= compilers: Checking arg --with-bugurl=https://github.com/Homebrew/homebrew-core/issues compilers: Unknown arg --with-bugurl=https://github.com/Homebrew/homebrew-core/issues compilers: Checking arg --build=aarch64-apple-darwin20 compilers: Unknown arg --build=aarch64-apple-darwin20 compilers: Checking arg --with-system-zlib compilers: Unknown arg --with-system-zlib compilers: Checking arg --with-native-system-header-dir=/usr/include compilers: Unknown arg --with-native-system-header-dir=/usr/include compilers: Checking arg --with-sysroot=/Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk compilers: Unknown arg --with-sysroot=/Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk compilers: Checking arg Thread compilers: Unknown arg Thread compilers: Checking arg model: compilers: Unknown arg model: compilers: Checking arg posix compilers: Unknown arg posix compilers: Checking arg Supported compilers: Unknown arg Supported compilers: Checking arg LTO compilers: Unknown arg LTO compilers: Checking arg compression compilers: Unknown arg compression compilers: Checking arg algorithms: compilers: Unknown arg algorithms: compilers: Checking arg zlib compilers: Unknown arg zlib compilers: Checking arg zstd compilers: Unknown arg zstd compilers: Checking arg gcc compilers: Unknown arg gcc compilers: Checking arg version compilers: Unknown arg version compilers: Checking arg 11.2.0 compilers: Unknown arg 11.2.0 compilers: Checking arg (Homebrew compilers: Unknown arg (Homebrew compilers: Checking arg GCC compilers: Unknown arg GCC compilers: Checking arg 11.2.0_3) compilers: Unknown arg 11.2.0_3) compilers: Checking arg Reading compilers: Unknown arg Reading compilers: Checking arg specs compilers: Unknown arg specs compilers: Checking arg from compilers: Unknown arg from compilers: Checking arg /opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11/../../../libgfortran.spec compilers: Unknown arg /opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11/../../../libgfortran.spec compilers: Checking arg rename compilers: Unknown arg rename compilers: Checking arg spec compilers: Unknown arg spec compilers: Checking arg lib compilers: Unknown arg lib compilers: Checking arg to compilers: Unknown arg to compilers: Checking arg liborig compilers: Unknown arg liborig compilers: Checking arg COLLECT_GCC_OPTIONS= compilers: Unknown arg COLLECT_GCC_OPTIONS= compilers: Checking arg COMPILER_PATH=/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../libexec/gcc/aarch64-apple-darwin20/11/:/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../libexec/gcc/ compilers: Skipping arg COMPILER_PATH=/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../libexec/gcc/aarch64-apple-darwin20/11/:/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../libexec/gcc/ compilers: Checking arg LIBRARY_PATH=/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11/:/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/:/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11/../../../ compilers: Skipping arg LIBRARY_PATH=/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11/:/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/:/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11/../../../ compilers: Checking arg COLLECT_GCC_OPTIONS= compilers: Unknown arg COLLECT_GCC_OPTIONS= compilers: Checking arg /opt/homebrew/Cellar/gcc/11.2.0_3/bin/../libexec/gcc/aarch64-apple-darwin20/11/collect2 compilers: Unknown arg /opt/homebrew/Cellar/gcc/11.2.0_3/bin/../libexec/gcc/aarch64-apple-darwin20/11/collect2 compilers: Checking arg -syslibroot compilers: Unknown arg -syslibroot compilers: Checking arg /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/ compilers: Unknown arg /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/ compilers: Checking arg -dynamic compilers: Unknown arg -dynamic compilers: Checking arg -arch compilers: Unknown arg -arch compilers: Checking arg arm64 compilers: Unknown arg arm64 compilers: Checking arg -macosx_version_min compilers: Unknown arg -macosx_version_min compilers: Checking arg 11.5.0 compilers: Unknown arg 11.5.0 compilers: Checking arg -weak_reference_mismatches compilers: Unknown arg -weak_reference_mismatches compilers: Checking arg non-weak compilers: Unknown arg non-weak compilers: Checking arg -o compilers: Unknown arg -o compilers: Checking arg /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest compilers: Unknown arg /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest compilers: Checking arg -L/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11 compilers: Found library directory: -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 compilers: Checking arg -L/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc compilers: Found library directory: -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc compilers: Checking arg -L/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11/../../.. compilers: Found library directory: -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 compilers: Checking arg -bind_at_load compilers: Unknown arg -bind_at_load compilers: Checking arg -multiply_defined compilers: Unknown arg -multiply_defined compilers: Checking arg suppress compilers: Unknown arg suppress compilers: Checking arg -multiply_defined compilers: Unknown arg -multiply_defined compilers: Checking arg suppress compilers: Unknown arg suppress compilers: Checking arg -commons compilers: Unknown arg -commons compilers: Checking arg use_dylibs compilers: Unknown arg use_dylibs compilers: Checking arg -search_paths_first compilers: Unknown arg -search_paths_first compilers: Checking arg -no_compact_unwind compilers: Unknown arg -no_compact_unwind compilers: Checking arg /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o compilers: Unknown arg /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o compilers: Checking arg -lgfortran compilers: Found library: -lgfortran compilers: Checking arg -lgcc_s.1.1 compilers: Found library: -lgcc_s.1.1 compilers: Checking arg -lgcc compilers: Found system library therefore skipping: -lgcc compilers: Checking arg -lm compilers: Found library: -lm compilers: Checking arg -lgcc_s.1.1 compilers: Already in lflags: -lgcc_s.1.1 compilers: Checking arg -lgcc compilers: Found system library therefore skipping: -lgcc compilers: Checking arg -lSystem compilers: Found system library therefore skipping: -lSystem compilers: Checking arg -lgcc compilers: Found system library therefore skipping: -lgcc compilers: Checking arg -no_compact_unwind compilers: Unknown arg -no_compact_unwind compilers: Checking arg -rpath compilers: Checking arg -rpath compilers: Found -rpath library: /opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 compilers: Checking arg -rpath compilers: Found -rpath library: /opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc compilers: Checking arg -rpath compilers: Found -rpath library: /opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 compilers: Checking arg -v compilers: Unknown arg -v compilers: Checking arg -idsym compilers: Unknown arg -idsym compilers: Checking arg collect2 compilers: Unknown arg collect2 compilers: Checking arg version compilers: Unknown arg version compilers: Checking arg 11.2.0 compilers: Unknown arg 11.2.0 compilers: Checking arg /usr/bin/ld compilers: Unknown arg /usr/bin/ld compilers: Checking arg -syslibroot compilers: Unknown arg -syslibroot compilers: Checking arg /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/ compilers: Unknown arg /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/ compilers: Checking arg -dynamic compilers: Unknown arg -dynamic compilers: Checking arg -arch compilers: Unknown arg -arch compilers: Checking arg arm64 compilers: Unknown arg arm64 compilers: Checking arg -macosx_version_min compilers: Unknown arg -macosx_version_min compilers: Checking arg 11.5.0 compilers: Unknown arg 11.5.0 compilers: Checking arg -weak_reference_mismatches compilers: Unknown arg -weak_reference_mismatches compilers: Checking arg non-weak compilers: Unknown arg non-weak compilers: Checking arg -o compilers: Unknown arg -o compilers: Checking arg /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest compilers: Unknown arg /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest compilers: Checking arg -L/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11 compilers: Already in lflags so skipping: -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 compilers: Checking arg -L/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc compilers: Already in lflags so skipping: -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc compilers: Checking arg -L/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11/../../.. compilers: Already in lflags so skipping: -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 compilers: Checking arg -bind_at_load compilers: Unknown arg -bind_at_load compilers: Checking arg -multiply_defined compilers: Unknown arg -multiply_defined compilers: Checking arg suppress compilers: Unknown arg suppress compilers: Checking arg -multiply_defined compilers: Unknown arg -multiply_defined compilers: Checking arg suppress compilers: Unknown arg suppress compilers: Checking arg -commons compilers: Unknown arg -commons compilers: Checking arg use_dylibs compilers: Unknown arg use_dylibs compilers: Checking arg -search_paths_first compilers: Unknown arg -search_paths_first compilers: Checking arg -no_compact_unwind compilers: Unknown arg -no_compact_unwind compilers: Checking arg /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o compilers: Unknown arg /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o compilers: Checking arg -lgfortran compilers: Already in lflags: -lgfortran compilers: Checking arg -lgcc_s.1.1 compilers: Already in lflags: -lgcc_s.1.1 compilers: Checking arg -lgcc compilers: Found system library therefore skipping: -lgcc compilers: Checking arg -lm compilers: Already in lflags: -lm compilers: Checking arg -lgcc_s.1.1 compilers: Already in lflags: -lgcc_s.1.1 compilers: Checking arg -lgcc compilers: Found system library therefore skipping: -lgcc compilers: Checking arg -lSystem compilers: Found system library therefore skipping: -lSystem compilers: Checking arg -lgcc compilers: Found system library therefore skipping: -lgcc compilers: Checking arg -no_compact_unwind compilers: Unknown arg -no_compact_unwind compilers: Checking arg -rpath compilers: Checking arg -rpath compilers: Already in rpathflags so skipping: -rpath compilers: Checking arg -rpath compilers: Already in rpathflags so skipping: -rpath compilers: Checking arg -rpath compilers: Already in rpathflags so skipping: -rpath compilers: Checking arg -v compilers: Unknown arg -v compilers: Checking arg @(#)PROGRAM:ld compilers: Unknown arg @(#)PROGRAM:ld compilers: Checking arg PROJECT:ld64-650.9 compilers: Unknown arg PROJECT:ld64-650.9 compilers: Checking arg BUILD compilers: Unknown arg BUILD compilers: Checking arg 13:09:13 compilers: Unknown arg 13:09:13 compilers: Checking arg May compilers: Unknown arg May compilers: Checking arg 28 compilers: Unknown arg 28 compilers: Checking arg 2021 compilers: Unknown arg 2021 compilers: Checking arg configured compilers: Unknown arg configured compilers: Checking arg to compilers: Unknown arg to compilers: Checking arg support compilers: Unknown arg support compilers: Checking arg archs: compilers: Unknown arg archs: compilers: Checking arg armv6 compilers: Unknown arg armv6 compilers: Checking arg armv7 compilers: Unknown arg armv7 compilers: Checking arg armv7s compilers: Unknown arg armv7s compilers: Checking arg arm64 compilers: Unknown arg arm64 compilers: Checking arg arm64e compilers: Unknown arg arm64e compilers: Checking arg arm64_32 compilers: Unknown arg arm64_32 compilers: Checking arg i386 compilers: Unknown arg i386 compilers: Checking arg x86_64 compilers: Unknown arg x86_64 compilers: Checking arg x86_64h compilers: Unknown arg x86_64h compilers: Checking arg armv6m compilers: Unknown arg armv6m compilers: Checking arg armv7k compilers: Unknown arg armv7k compilers: Checking arg armv7m compilers: Unknown arg armv7m compilers: Checking arg armv7em compilers: Unknown arg armv7em compilers: Checking arg Library compilers: Unknown arg Library compilers: Checking arg search compilers: Unknown arg search compilers: Checking arg paths: compilers: Unknown arg paths: compilers: Checking arg /opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 compilers: Unknown arg /opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 compilers: Checking arg /opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc compilers: Unknown arg /opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc compilers: Checking arg /opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 compilers: Unknown arg /opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 compilers: Checking arg /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/lib compilers: Unknown arg /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/lib compilers: Checking arg Framework compilers: Unknown arg Framework compilers: Checking arg search compilers: Unknown arg search compilers: Checking arg paths: compilers: Unknown arg paths: compilers: Checking arg /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/System/Library/Frameworks/ compilers: Unknown arg /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/System/Library/Frameworks/ compilers: Libraries needed to link Fortran code with the C linker: ['-ldl', '-lgfortran', '-Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11', '-L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11', '-Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc', '-L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc', '-Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11', '-L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11', '-lgfortran', '-lgcc_s.1.1', '-lm', '-Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11', '-Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc', '-Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11'] compilers: Libraries needed to link Fortran main with the C linker: [] compilers: Check that Fortran libraries can be used with Fortran as the linker ===== Checking compiler Executing: gfortran -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -fPIC -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.F90 Successful compile: Source: program main end ===== Checking linker Executing: gfortran -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -fPIC -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.F90 Successful compile: Source: program main end Executing: gfortran -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -ldl -lgfortran -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 -lgfortran -lgcc_s.1.1 -lm -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 -ldl ======== Checking running linked program ===== Checking linker Executing: gfortran -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -fPIC -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.F90 Successful compile: Source: program main end Executing: gfortran -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -ldl -lgfortran -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 -lgfortran -lgcc_s.1.1 -lm -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 -ldl Testing executable /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest to see if it can be run Executing: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest Running Executable with threads to time it out at 60 Executing: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest compilers: Check that Fortran libraries can be used with C as the linker ===== Checking compiler Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } ===== Checking linker Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -ldl -lgfortran -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 -lgfortran -lgcc_s.1.1 -lm -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 -ldl Possible ERROR while running linker: stderr: ld: warning: dylib (/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/libgfortran.dylib) was built for newer macOS version (11.5) than being linked (11.0) Linker output before filtering: ld: warning: dylib (/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/libgfortran.dylib) was built for newer macOS version (11.5) than being linked (11.0) : Linker output after filtering: : ======== Checking running linked program ===== Checking linker Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -ldl -lgfortran -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 -lgfortran -lgcc_s.1.1 -lm -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 -ldl Possible ERROR while running linker: stderr: ld: warning: dylib (/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/libgfortran.dylib) was built for newer macOS version (11.5) than being linked (11.0) Linker output before filtering: ld: warning: dylib (/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/libgfortran.dylib) was built for newer macOS version (11.5) than being linked (11.0) : Linker output after filtering: : Testing executable /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest to see if it can be run Executing: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest Running Executable with threads to time it out at 60 Executing: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest ============================================================================================= TESTING: setupFrameworkCompilers from config.compilers(config/BuildSystem/config/compilers.py:1442) child config.compilers took 1.228692 seconds ============================================================================================= TESTING: configureClosure from config.utilities.closure(config/BuildSystem/config/utilities/closure.py:17) Determine if Apple ^close syntax is supported in C ===== Checking linker Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure/conftest.c Possible ERROR while running compiler: stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure/conftest.c:6:7: warning: unused variable 'closure' [-Wunused-variable] int (^closure)(int);; ^ 1 warning generated. Source: #include "confdefs.h" #include "conffix.h" #include int main() { int (^closure)(int);; return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure/conftest.o -ldl Defined "HAVE_CLOSURE" to "1" child config.utilities.closure took 0.067509 seconds ============================================================================================= TESTING: checkFortranTypeSizes from config.compilersFortran(config/BuildSystem/config/compilersFortran.py:56) Check whether real*8 is supported and suggest flags which will allow support Executing: gfortran -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -fPIC -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran/conftest.F90 Possible ERROR while running compiler: stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran/conftest.F90:2:21: 2 | real*8 variable | 1 Warning: Unused variable 'variable' declared at (1) [-Wunused-variable] Source: program main real*8 variable end ============================================================================================= TESTING: checkFortranPreprocessor from config.compilersFortran(config/BuildSystem/config/compilersFortran.py:73) Determine if Fortran handles preprocessing properly Executing: gfortran -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -fPIC -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.F90 Successful compile: Source: program main #define dummy dummy #ifndef dummy fooey #endif end Output from compiling with -fPIC -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 compilers: Fortran uses preprocessor ============================================================================================= TESTING: checkFortranDefineCompilerOption from config.compilersFortran(config/BuildSystem/config/compilersFortran.py:96) Check if -WF,-Dfoobar or -Dfoobar is the compiler option to define a macro Executing: gfortran -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -fPIC -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 -DTesting /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.F90 Successful compile: Source: program main #define dummy dummy #ifndef Testing fooey #endif end Output from compiling with -fPIC -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 -DTesting Defined make macro "FC_DEFINE_FLAG" to "-D" compilers: Fortran uses -D for defining macro ============================================================================================= TESTING: checkFortran90 from config.compilersFortran(config/BuildSystem/config/compilersFortran.py:146) Determine whether the Fortran compiler handles F90 ===== Checking linker Executing: gfortran -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -fPIC -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran/conftest.F90 Possible ERROR while running compiler: stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran/conftest.F90:3:43: 3 | REAL(KIND=SELECTED_REAL_KIND(10)) d | 1 Warning: Unused variable 'd' declared at (1) [-Wunused-variable] Source: program main REAL(KIND=SELECTED_REAL_KIND(10)) d INTEGER, PARAMETER :: int = SELECTED_INT_KIND(8) INTEGER (KIND=int) :: ierr ierr = 1 end Executing: gfortran -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran/conftest.o -ldl Fortran compiler supports F90 ============================================================================================= TESTING: checkFortran90FreeForm from config.compilersFortran(config/BuildSystem/config/compilersFortran.py:162) Determine whether the Fortran compiler handles F90FreeForm We also require that the compiler handles lines longer than 132 characters ===== Checking linker Executing: gfortran -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -fPIC -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran/conftest.F90 Successful compile: Source: program main INTEGER, PARAMETER :: int = SELECTED_INT_KIND(8); INTEGER (KIND=int) :: ierr; ierr = 1 end Executing: gfortran -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran/conftest.o -ldl Defined "USING_F90FREEFORM" to "1" Fortran compiler supports F90FreeForm ============================================================================================= TESTING: checkFortran2003 from config.compilersFortran(config/BuildSystem/config/compilersFortran.py:176) Determine whether the Fortran compiler handles F2003 ===== Checking linker Executing: gfortran -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -fPIC -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran/conftest.F90 Possible ERROR while running compiler: stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran/conftest.F90:21:55: 21 | CArray = (/(c_loc(list1(i)),i=1,5),c_loc(nullc)/) | ^ Warning: 'carray.data' may be used uninitialized [-Wmaybe-uninitialized] /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran/conftest.F90:16:48: 16 | Type(C_Ptr),Dimension(:),Pointer :: CArray | ^ note: 'carray' declared here /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran/conftest.F90:21:55: 21 | CArray = (/(c_loc(list1(i)),i=1,5),c_loc(nullc)/) | ^ Warning: 'carray.offset' may be used uninitialized [-Wmaybe-uninitialized] /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran/conftest.F90:16:48: 16 | Type(C_Ptr),Dimension(:),Pointer :: CArray | ^ note: 'carray' declared here /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran/conftest.F90:21:55: 21 | CArray = (/(c_loc(list1(i)),i=1,5),c_loc(nullc)/) | ^ Warning: 'carray.dim[0].lbound' may be used uninitialized [-Wmaybe-uninitialized] /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran/conftest.F90:16:48: 16 | Type(C_Ptr),Dimension(:),Pointer :: CArray | ^ note: 'carray' declared here /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran/conftest.F90:21:55: 21 | CArray = (/(c_loc(list1(i)),i=1,5),c_loc(nullc)/) | ^ Warning: 'carray.dim[0].ubound' may be used uninitialized [-Wmaybe-uninitialized] /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran/conftest.F90:16:48: 16 | Type(C_Ptr),Dimension(:),Pointer :: CArray | ^ note: 'carray' declared here /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran/conftest.F90:21:55: 21 | CArray = (/(c_loc(list1(i)),i=1,5),c_loc(nullc)/) | ^ Warning: 'carray.dim[0].stride' may be used uninitialized [-Wmaybe-uninitialized] /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran/conftest.F90:16:48: 16 | Type(C_Ptr),Dimension(:),Pointer :: CArray | ^ note: 'carray' declared here Source: module Base_module type, public :: base_type integer :: A contains procedure, public :: Print => BasePrint end type base_type contains subroutine BasePrint(this) class(base_type) :: this end subroutine BasePrint end module Base_module program main use,intrinsic :: iso_c_binding Type(C_Ptr),Dimension(:),Pointer :: CArray character(kind=c_char),pointer :: nullc => null() character(kind=c_char,len=5),dimension(:),pointer::list1 allocate(list1(5)) CArray = (/(c_loc(list1(i)),i=1,5),c_loc(nullc)/) end Executing: gfortran -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran/conftest.o -ldl Defined "USING_F2003" to "1" Fortran compiler supports F2003 ============================================================================================= TESTING: checkFortran90Array from config.compilersFortran(config/BuildSystem/config/compilersFortran.py:211) Check for F90 array interfaces Executing: uname -s stdout: Darwin ===== Checking compiler Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include void f90arraytest_(void* a1, void* a2,void* a3, void* i) { printf("arrays [%p %p %p]\n",a1,a2,a3); fflush(stdout); return; } void f90ptrtest_(void* a1, void* a2,void* a3, void* i, void* p1 ,void* p2, void* p3) { printf("arrays [%p %p %p]\n",a1,a2,a3); if ((p1 == p3) && (p1 != p2)) { printf("pointers match! [%p %p] [%p]\n",p1,p3,p2); fflush(stdout); } else { printf("pointers do not match! [%p %p] [%p]\n",p1,p3,p2); fflush(stdout); exit(111); } return; } ======== Checking running linked program ===== Checking linker Executing: gfortran -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -fPIC -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran/conftest.F90 Successful compile: Source: program main Interface Subroutine f90ptrtest(p1,p2,p3,i) integer, pointer :: p1(:,:) integer, pointer :: p2(:,:) integer, pointer :: p3(:,:) integer i End Subroutine End Interface integer, pointer :: ptr1(:,:),ptr2(:,:) integer, target :: array(6:8,9:21) integer in in = 25 ptr1 => array ptr2 => array call f90arraytest(ptr1,ptr2,ptr1,in) call f90ptrtest(ptr1,ptr2,ptr1,in) end Executing: gfortran -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran/conftest.o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran/fooobj.o -ldl Testing executable /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran/conftest to see if it can be run Executing: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran/conftest Running Executable with threads to time it out at 60 Executing: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran/conftest stdout: arrays [0x16b6d7460 0x16b6d7460 0x16b6d7460] arrays [0x16b6d7400 0x16b6d73a8 0x16b6d7400] pointers do not match! [0x16b6d6f20 0xa] [0x16b6d7320] ERROR while running executable: Could not execute "['/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran/conftest']": arrays [0x16b6d7460 0x16b6d7460 0x16b6d7460] arrays [0x16b6d7400 0x16b6d73a8 0x16b6d7400] pointers do not match! [0x16b6d6f20 0xa] [0x16b6d7320] compilers: F90 uses a single argument for array pointers ============================================================================================= TESTING: checkFortran90AssumedType from config.compilersFortran(config/BuildSystem/config/compilersFortran.py:298) Executing: gfortran -qversion ============================================================================================= TESTING: checkFortranModuleInclude from config.compilersFortran(config/BuildSystem/config/compilersFortran.py:303) Figures out what flag is used to specify the include path for Fortran modules ===== Checking compiler Executing: gfortran -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -fPIC -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran/conftest.F90 Successful compile: Source: module configtest integer testint parameter (testint = 42) end module configtest ===== Checking linker Executing: gfortran -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran/confdir -fPIC -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran/conftest.F90 Successful compile: Source: program main use configtest write(*,*) testint end Executing: gfortran -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran/confdir -fPIC -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran/conftest.o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran/configtest.o -ldl compilers: Fortran module include flag -I found ============================================================================================= TESTING: checkFortranModuleOutput from config.compilersFortran(config/BuildSystem/config/compilersFortran.py:369) Figures out what flag is used to specify the output path for Fortran modules ===== Checking compiler Executing: gfortran -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -module /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran/confdir -fPIC -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran/conftest.F90 Possible ERROR while running compiler: exit code 1 stderr: gfortran: error: unrecognized command-line option '-module'; did you mean '-Mmodules'? Source: module configtest integer testint parameter (testint = 42) end module configtest compilers: Fortran module output flag -module compile failed ===== Checking compiler Executing: gfortran -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -module:/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran/confdir -fPIC -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran/conftest.F90 Possible ERROR while running compiler: exit code 1 stderr: gfortran: error: unrecognized command-line option '-module:/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran/confdir' Source: module configtest integer testint parameter (testint = 42) end module configtest compilers: Fortran module output flag -module: compile failed ===== Checking compiler Executing: gfortran -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -fmod=/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran/confdir -fPIC -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran/conftest.F90 Possible ERROR while running compiler: exit code 1 stderr: gfortran: error: unrecognized command-line option '-fmod=/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran/confdir' Source: module configtest integer testint parameter (testint = 42) end module configtest compilers: Fortran module output flag -fmod= compile failed ===== Checking compiler Executing: gfortran -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -J/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran/confdir -fPIC -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran/conftest.F90 Successful compile: Source: module configtest integer testint parameter (testint = 42) end module configtest compilers: Fortran module output flag -J found ============================================================================================= TESTING: checkFortranTypeStar from config.compilersFortran(config/BuildSystem/config/compilersFortran.py:135) Determine whether the Fortran compiler handles type(*) ===== Checking compiler Executing: gfortran -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -fPIC -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran/conftest.F90 Successful compile: Source: program main interface subroutine a(b) type(*) :: b(:) end subroutine end interface end Defined "HAVE_FORTRAN_TYPE_STAR" to "1" Fortran compiler supports type(*) ============================================================================================= TESTING: checkFortranTypeInitialize from config.compilersFortran(config/BuildSystem/config/compilersFortran.py:125) Determines if PETSc objects in Fortran are initialized by default (doesn't work with common blocks) Defined "FORTRAN_TYPE_INITIALIZE" to " = -2" Initializing Fortran objects ============================================================================================= TESTING: configureFortranFlush from config.compilersFortran(config/BuildSystem/config/compilersFortran.py:116) ===== Checking linker Executing: gfortran -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -fPIC -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran/conftest.F90 Successful compile: Source: program main call flush(6) end Executing: gfortran -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran/conftest.o -ldl Defined "HAVE_FORTRAN_FLUSH" to "1" ============================================================================================= TESTING: checkDependencyGenerationFlag from config.compilersFortran(config/BuildSystem/config/compilersFortran.py:414) Check if -MMD works for dependency generation, and add it if it does Trying FC compiler flag -MMD -MP Executing: gfortran -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -fPIC -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 -MMD -MP /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.F90 Successful compile: Source: program main end Output from compiling with -fPIC -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 -MMD -MP Defined make macro "FC_DEPFLAGS" to "-MMD -MP" child config.compilersFortran took 0.964727 seconds ============================================================================================= TESTING: checkStdC from config.headers(config/BuildSystem/config/headers.py:107) ===== Checking compiler Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #include #include int main() { ; return 0; } Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c ======== Checking running linked program ===== Checking linker Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #define ISLOWER(c) ('a' <= (c) && (c) <= 'z') #define TOUPPER(c) (ISLOWER(c) ? 'A' + ((c) - 'a') : (c)) #define XOR(e, f) (((e) && !(f)) || (!(e) && (f))) int main() { int i; for(i = 0; i < 256; i++) if (XOR(islower(i), ISLOWER(i)) || toupper(i) != TOUPPER(i)) exit(2); exit(0); ; return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.o -ldl Testing executable /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest to see if it can be run Executing: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest Running Executable with threads to time it out at 60 Executing: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest ============================================================================================= TESTING: checkStat from config.headers(config/BuildSystem/config/headers.py:140) Checks whether stat file-mode macros are broken, and defines STAT_MACROS_BROKEN if they are Preprocessing source: #include "confdefs.h" #include "conffix.h" #include #include #if defined(S_ISBLK) && defined(S_IFDIR) # if S_ISBLK (S_IFDIR) You lose. # endif #endif #if defined(S_ISBLK) && defined(S_IFCHR) # if S_ISBLK (S_IFCHR) You lose. # endif #endif #if defined(S_ISLNK) && defined(S_IFREG) # if S_ISLNK (S_IFREG) You lose. # endif #endif #if defined(S_ISSOCK) && defined(S_IFREG) # if S_ISSOCK (S_IFREG) You lose. # endif #endif Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c ============================================================================================= TESTING: checkSysWait from config.headers(config/BuildSystem/config/headers.py:175) Check for POSIX.1 compatible sys/wait.h, and defines HAVE_SYS_WAIT_H if found ===== Checking compiler Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #ifndef WEXITSTATUS #define WEXITSTATUS(stat_val) ((unsigned)(stat_val) >> 8) #endif #ifndef WIFEXITED #define WIFEXITED(stat_val) (((stat_val) & 255) == 0) #endif int main() { int s; wait (&s); s = WIFEXITED (s) ? WEXITSTATUS (s) : 1; ; return 0; } Defined "HAVE_SYS_WAIT_H" to "1" ============================================================================================= TESTING: checkTime from config.headers(config/BuildSystem/config/headers.py:197) Checks if you can safely include both and , and if so defines TIME_WITH_SYS_TIME Checking for header: time.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Preprocess output before filtering: : Preprocess output after filtering: : Defined "HAVE_TIME_H" to "1" Checking for header: sys/time.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Preprocess output before filtering: : Preprocess output after filtering: : Defined "HAVE_SYS_TIME_H" to "1" ============================================================================================= TESTING: checkMath from config.headers(config/BuildSystem/config/headers.py:203) Checks for the math headers and defines Checking for header: math.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Preprocess output before filtering: : Preprocess output after filtering: : ===== Checking compiler Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Possible ERROR while running compiler: stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:8:8: warning: if statement has empty body [-Wempty-body] if (pi); ^ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:8:8: note: put the semicolon on a separate line to silence this warning 1 warning generated. Source: #include "confdefs.h" #include "conffix.h" #include int main() { double pi = M_PI; if (pi); ; return 0; } Found math #defines, like M_PI ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: setjmp.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Preprocess output before filtering: : Preprocess output after filtering: : Defined "HAVE_SETJMP_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: dos.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 1 stdout: # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" # 1 "" 1 # 1 "" 3 # 384 "" 3 # 1 "" 1 # 1 "" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/confdefs.h" 1 # 2 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conffix.h" 1 # 3 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" 2 stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:3:10: fatal error: 'dos.h' file not found #include ^~~~~~~ 1 error generated. Source: #include "confdefs.h" #include "conffix.h" #include Preprocess output before filtering: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:3:10: fatal error: 'dos.h' file not found #include ^~~~~~~ 1 error generated. : Preprocess output after filtering: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:3:10: fatal error: 'dos.h' file not found #include ^~~~~~~ 1 error generated.: ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: fcntl.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Preprocess output before filtering: : Preprocess output after filtering: : Defined "HAVE_FCNTL_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: float.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Preprocess output before filtering: : Preprocess output after filtering: : Defined "HAVE_FLOAT_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: io.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 1 stdout: # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" # 1 "" 1 # 1 "" 3 # 384 "" 3 # 1 "" 1 # 1 "" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/confdefs.h" 1 # 2 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conffix.h" 1 # 3 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" 2 stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:3:10: fatal error: 'io.h' file not found #include ^~~~~~ 1 error generated. Source: #include "confdefs.h" #include "conffix.h" #include Preprocess output before filtering: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:3:10: fatal error: 'io.h' file not found #include ^~~~~~ 1 error generated. : Preprocess output after filtering: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:3:10: fatal error: 'io.h' file not found #include ^~~~~~ 1 error generated.: ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: malloc.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 1 stdout: # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" # 1 "" 1 # 1 "" 3 # 384 "" 3 # 1 "" 1 # 1 "" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/confdefs.h" 1 # 2 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conffix.h" 1 # 3 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" 2 stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:3:10: fatal error: 'malloc.h' file not found #include ^~~~~~~~~~ 1 error generated. Source: #include "confdefs.h" #include "conffix.h" #include Preprocess output before filtering: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:3:10: fatal error: 'malloc.h' file not found #include ^~~~~~~~~~ 1 error generated. : Preprocess output after filtering: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:3:10: fatal error: 'malloc.h' file not found #include ^~~~~~~~~~ 1 error generated.: ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: pwd.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Preprocess output before filtering: : Preprocess output after filtering: : Defined "HAVE_PWD_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: strings.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Preprocess output before filtering: : Preprocess output after filtering: : Defined "HAVE_STRINGS_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: unistd.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Preprocess output before filtering: : Preprocess output after filtering: : Defined "HAVE_UNISTD_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/sysinfo.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 1 stdout: # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" # 1 "" 1 # 1 "" 3 # 384 "" 3 # 1 "" 1 # 1 "" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/confdefs.h" 1 # 2 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conffix.h" 1 # 3 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" 2 stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:3:10: fatal error: 'sys/sysinfo.h' file not found #include ^~~~~~~~~~~~~~~ 1 error generated. Source: #include "confdefs.h" #include "conffix.h" #include Preprocess output before filtering: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:3:10: fatal error: 'sys/sysinfo.h' file not found #include ^~~~~~~~~~~~~~~ 1 error generated. : Preprocess output after filtering: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:3:10: fatal error: 'sys/sysinfo.h' file not found #include ^~~~~~~~~~~~~~~ 1 error generated.: ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: machine/endian.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Preprocess output before filtering: : Preprocess output after filtering: : Defined "HAVE_MACHINE_ENDIAN_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/param.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Preprocess output before filtering: : Preprocess output after filtering: : Defined "HAVE_SYS_PARAM_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/procfs.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 1 stdout: # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" # 1 "" 1 # 1 "" 3 # 384 "" 3 # 1 "" 1 # 1 "" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/confdefs.h" 1 # 2 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conffix.h" 1 # 3 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" 2 stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:3:10: fatal error: 'sys/procfs.h' file not found #include ^~~~~~~~~~~~~~ 1 error generated. Source: #include "confdefs.h" #include "conffix.h" #include Preprocess output before filtering: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:3:10: fatal error: 'sys/procfs.h' file not found #include ^~~~~~~~~~~~~~ 1 error generated. : Preprocess output after filtering: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:3:10: fatal error: 'sys/procfs.h' file not found #include ^~~~~~~~~~~~~~ 1 error generated.: ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/resource.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Preprocess output before filtering: : Preprocess output after filtering: : Defined "HAVE_SYS_RESOURCE_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/systeminfo.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 1 stdout: # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" # 1 "" 1 # 1 "" 3 # 384 "" 3 # 1 "" 1 # 1 "" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/confdefs.h" 1 # 2 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conffix.h" 1 # 3 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" 2 stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:3:10: fatal error: 'sys/systeminfo.h' file not found #include ^~~~~~~~~~~~~~~~~~ 1 error generated. Source: #include "confdefs.h" #include "conffix.h" #include Preprocess output before filtering: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:3:10: fatal error: 'sys/systeminfo.h' file not found #include ^~~~~~~~~~~~~~~~~~ 1 error generated. : Preprocess output after filtering: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:3:10: fatal error: 'sys/systeminfo.h' file not found #include ^~~~~~~~~~~~~~~~~~ 1 error generated.: ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/times.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Preprocess output before filtering: : Preprocess output after filtering: : Defined "HAVE_SYS_TIMES_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/utsname.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Preprocess output before filtering: : Preprocess output after filtering: : Defined "HAVE_SYS_UTSNAME_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/socket.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Preprocess output before filtering: : Preprocess output after filtering: : Defined "HAVE_SYS_SOCKET_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/wait.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Preprocess output before filtering: : Preprocess output after filtering: : Defined "HAVE_SYS_WAIT_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: netinet/in.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Preprocess output before filtering: : Preprocess output after filtering: : Defined "HAVE_NETINET_IN_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: netdb.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Preprocess output before filtering: : Preprocess output after filtering: : Defined "HAVE_NETDB_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: direct.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 1 stdout: # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" # 1 "" 1 # 1 "" 3 # 384 "" 3 # 1 "" 1 # 1 "" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/confdefs.h" 1 # 2 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conffix.h" 1 # 3 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" 2 stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:3:10: fatal error: 'direct.h' file not found #include ^~~~~~~~~~ 1 error generated. Source: #include "confdefs.h" #include "conffix.h" #include Preprocess output before filtering: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:3:10: fatal error: 'direct.h' file not found #include ^~~~~~~~~~ 1 error generated. : Preprocess output after filtering: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:3:10: fatal error: 'direct.h' file not found #include ^~~~~~~~~~ 1 error generated.: ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: time.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Preprocess output before filtering: : Preprocess output after filtering: : Defined "HAVE_TIME_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: Ws2tcpip.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 1 stdout: # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" # 1 "" 1 # 1 "" 3 # 384 "" 3 # 1 "" 1 # 1 "" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/confdefs.h" 1 # 2 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conffix.h" 1 # 3 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" 2 stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:3:10: fatal error: 'Ws2tcpip.h' file not found #include ^~~~~~~~~~~~ 1 error generated. Source: #include "confdefs.h" #include "conffix.h" #include Preprocess output before filtering: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:3:10: fatal error: 'Ws2tcpip.h' file not found #include ^~~~~~~~~~~~ 1 error generated. : Preprocess output after filtering: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:3:10: fatal error: 'Ws2tcpip.h' file not found #include ^~~~~~~~~~~~ 1 error generated.: ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/types.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Preprocess output before filtering: : Preprocess output after filtering: : Defined "HAVE_SYS_TYPES_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: WindowsX.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 1 stdout: # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" # 1 "" 1 # 1 "" 3 # 384 "" 3 # 1 "" 1 # 1 "" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/confdefs.h" 1 # 2 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conffix.h" 1 # 3 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" 2 stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:3:10: fatal error: 'WindowsX.h' file not found #include ^~~~~~~~~~~~ 1 error generated. Source: #include "confdefs.h" #include "conffix.h" #include Preprocess output before filtering: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:3:10: fatal error: 'WindowsX.h' file not found #include ^~~~~~~~~~~~ 1 error generated. : Preprocess output after filtering: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:3:10: fatal error: 'WindowsX.h' file not found #include ^~~~~~~~~~~~ 1 error generated.: ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: float.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Preprocess output before filtering: : Preprocess output after filtering: : Defined "HAVE_FLOAT_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: ieeefp.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 1 stdout: # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" # 1 "" 1 # 1 "" 3 # 384 "" 3 # 1 "" 1 # 1 "" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/confdefs.h" 1 # 2 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conffix.h" 1 # 3 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" 2 stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:3:10: fatal error: 'ieeefp.h' file not found #include ^~~~~~~~~~ 1 error generated. Source: #include "confdefs.h" #include "conffix.h" #include Preprocess output before filtering: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:3:10: fatal error: 'ieeefp.h' file not found #include ^~~~~~~~~~ 1 error generated. : Preprocess output after filtering: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:3:10: fatal error: 'ieeefp.h' file not found #include ^~~~~~~~~~ 1 error generated.: ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: stdint.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Preprocess output before filtering: : Preprocess output after filtering: : Defined "HAVE_STDINT_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: pthread.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Preprocess output before filtering: : Preprocess output after filtering: : Defined "HAVE_PTHREAD_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: inttypes.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Preprocess output before filtering: : Preprocess output after filtering: : Defined "HAVE_INTTYPES_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: immintrin.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Preprocess output before filtering: : Preprocess output after filtering: : Defined "HAVE_IMMINTRIN_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: zmmintrin.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 1 stdout: # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" # 1 "" 1 # 1 "" 3 # 384 "" 3 # 1 "" 1 # 1 "" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/confdefs.h" 1 # 2 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conffix.h" 1 # 3 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" 2 stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:3:10: fatal error: 'zmmintrin.h' file not found #include ^~~~~~~~~~~~~ 1 error generated. Source: #include "confdefs.h" #include "conffix.h" #include Preprocess output before filtering: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:3:10: fatal error: 'zmmintrin.h' file not found #include ^~~~~~~~~~~~~ 1 error generated. : Preprocess output after filtering: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:3:10: fatal error: 'zmmintrin.h' file not found #include ^~~~~~~~~~~~~ 1 error generated.: ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: setjmp.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Preprocess output before filtering: : Preprocess output after filtering: : Defined "HAVE_SETJMP_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: dos.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 1 stdout: # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" # 1 "" 1 # 1 "" 3 # 384 "" 3 # 1 "" 1 # 1 "" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/confdefs.h" 1 # 2 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conffix.h" 1 # 3 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" 2 stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:3:10: fatal error: 'dos.h' file not found #include ^~~~~~~ 1 error generated. Source: #include "confdefs.h" #include "conffix.h" #include Preprocess output before filtering: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:3:10: fatal error: 'dos.h' file not found #include ^~~~~~~ 1 error generated. : Preprocess output after filtering: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:3:10: fatal error: 'dos.h' file not found #include ^~~~~~~ 1 error generated.: ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: fcntl.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Preprocess output before filtering: : Preprocess output after filtering: : Defined "HAVE_FCNTL_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: float.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Preprocess output before filtering: : Preprocess output after filtering: : Defined "HAVE_FLOAT_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: io.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 1 stdout: # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" # 1 "" 1 # 1 "" 3 # 384 "" 3 # 1 "" 1 # 1 "" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/confdefs.h" 1 # 2 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conffix.h" 1 # 3 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" 2 stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:3:10: fatal error: 'io.h' file not found #include ^~~~~~ 1 error generated. Source: #include "confdefs.h" #include "conffix.h" #include Preprocess output before filtering: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:3:10: fatal error: 'io.h' file not found #include ^~~~~~ 1 error generated. : Preprocess output after filtering: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:3:10: fatal error: 'io.h' file not found #include ^~~~~~ 1 error generated.: ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: malloc.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 1 stdout: # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" # 1 "" 1 # 1 "" 3 # 384 "" 3 # 1 "" 1 # 1 "" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/confdefs.h" 1 # 2 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conffix.h" 1 # 3 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" 2 stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:3:10: fatal error: 'malloc.h' file not found #include ^~~~~~~~~~ 1 error generated. Source: #include "confdefs.h" #include "conffix.h" #include Preprocess output before filtering: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:3:10: fatal error: 'malloc.h' file not found #include ^~~~~~~~~~ 1 error generated. : Preprocess output after filtering: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:3:10: fatal error: 'malloc.h' file not found #include ^~~~~~~~~~ 1 error generated.: ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: pwd.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Preprocess output before filtering: : Preprocess output after filtering: : Defined "HAVE_PWD_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: strings.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Preprocess output before filtering: : Preprocess output after filtering: : Defined "HAVE_STRINGS_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: unistd.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Preprocess output before filtering: : Preprocess output after filtering: : Defined "HAVE_UNISTD_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/sysinfo.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 1 stdout: # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" # 1 "" 1 # 1 "" 3 # 384 "" 3 # 1 "" 1 # 1 "" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/confdefs.h" 1 # 2 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conffix.h" 1 # 3 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" 2 stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:3:10: fatal error: 'sys/sysinfo.h' file not found #include ^~~~~~~~~~~~~~~ 1 error generated. Source: #include "confdefs.h" #include "conffix.h" #include Preprocess output before filtering: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:3:10: fatal error: 'sys/sysinfo.h' file not found #include ^~~~~~~~~~~~~~~ 1 error generated. : Preprocess output after filtering: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:3:10: fatal error: 'sys/sysinfo.h' file not found #include ^~~~~~~~~~~~~~~ 1 error generated.: ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: machine/endian.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Preprocess output before filtering: : Preprocess output after filtering: : Defined "HAVE_MACHINE_ENDIAN_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/param.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Preprocess output before filtering: : Preprocess output after filtering: : Defined "HAVE_SYS_PARAM_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/procfs.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 1 stdout: # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" # 1 "" 1 # 1 "" 3 # 384 "" 3 # 1 "" 1 # 1 "" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/confdefs.h" 1 # 2 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conffix.h" 1 # 3 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" 2 stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:3:10: fatal error: 'sys/procfs.h' file not found #include ^~~~~~~~~~~~~~ 1 error generated. Source: #include "confdefs.h" #include "conffix.h" #include Preprocess output before filtering: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:3:10: fatal error: 'sys/procfs.h' file not found #include ^~~~~~~~~~~~~~ 1 error generated. : Preprocess output after filtering: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:3:10: fatal error: 'sys/procfs.h' file not found #include ^~~~~~~~~~~~~~ 1 error generated.: ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/resource.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Preprocess output before filtering: : Preprocess output after filtering: : Defined "HAVE_SYS_RESOURCE_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/systeminfo.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 1 stdout: # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" # 1 "" 1 # 1 "" 3 # 384 "" 3 # 1 "" 1 # 1 "" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/confdefs.h" 1 # 2 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conffix.h" 1 # 3 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" 2 stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:3:10: fatal error: 'sys/systeminfo.h' file not found #include ^~~~~~~~~~~~~~~~~~ 1 error generated. Source: #include "confdefs.h" #include "conffix.h" #include Preprocess output before filtering: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:3:10: fatal error: 'sys/systeminfo.h' file not found #include ^~~~~~~~~~~~~~~~~~ 1 error generated. : Preprocess output after filtering: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:3:10: fatal error: 'sys/systeminfo.h' file not found #include ^~~~~~~~~~~~~~~~~~ 1 error generated.: ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/times.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Preprocess output before filtering: : Preprocess output after filtering: : Defined "HAVE_SYS_TIMES_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/utsname.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Preprocess output before filtering: : Preprocess output after filtering: : Defined "HAVE_SYS_UTSNAME_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/socket.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Preprocess output before filtering: : Preprocess output after filtering: : Defined "HAVE_SYS_SOCKET_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/wait.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Preprocess output before filtering: : Preprocess output after filtering: : Defined "HAVE_SYS_WAIT_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: netinet/in.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Preprocess output before filtering: : Preprocess output after filtering: : Defined "HAVE_NETINET_IN_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: netdb.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Preprocess output before filtering: : Preprocess output after filtering: : Defined "HAVE_NETDB_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: direct.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 1 stdout: # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" # 1 "" 1 # 1 "" 3 # 384 "" 3 # 1 "" 1 # 1 "" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/confdefs.h" 1 # 2 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conffix.h" 1 # 3 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" 2 stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:3:10: fatal error: 'direct.h' file not found #include ^~~~~~~~~~ 1 error generated. Source: #include "confdefs.h" #include "conffix.h" #include Preprocess output before filtering: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:3:10: fatal error: 'direct.h' file not found #include ^~~~~~~~~~ 1 error generated. : Preprocess output after filtering: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:3:10: fatal error: 'direct.h' file not found #include ^~~~~~~~~~ 1 error generated.: ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: time.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Preprocess output before filtering: : Preprocess output after filtering: : Defined "HAVE_TIME_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: Ws2tcpip.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 1 stdout: # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" # 1 "" 1 # 1 "" 3 # 384 "" 3 # 1 "" 1 # 1 "" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/confdefs.h" 1 # 2 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conffix.h" 1 # 3 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" 2 stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:3:10: fatal error: 'Ws2tcpip.h' file not found #include ^~~~~~~~~~~~ 1 error generated. Source: #include "confdefs.h" #include "conffix.h" #include Preprocess output before filtering: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:3:10: fatal error: 'Ws2tcpip.h' file not found #include ^~~~~~~~~~~~ 1 error generated. : Preprocess output after filtering: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:3:10: fatal error: 'Ws2tcpip.h' file not found #include ^~~~~~~~~~~~ 1 error generated.: ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/types.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Preprocess output before filtering: : Preprocess output after filtering: : Defined "HAVE_SYS_TYPES_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: WindowsX.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 1 stdout: # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" # 1 "" 1 # 1 "" 3 # 384 "" 3 # 1 "" 1 # 1 "" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/confdefs.h" 1 # 2 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conffix.h" 1 # 3 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" 2 stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:3:10: fatal error: 'WindowsX.h' file not found #include ^~~~~~~~~~~~ 1 error generated. Source: #include "confdefs.h" #include "conffix.h" #include Preprocess output before filtering: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:3:10: fatal error: 'WindowsX.h' file not found #include ^~~~~~~~~~~~ 1 error generated. : Preprocess output after filtering: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:3:10: fatal error: 'WindowsX.h' file not found #include ^~~~~~~~~~~~ 1 error generated.: ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: float.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Preprocess output before filtering: : Preprocess output after filtering: : Defined "HAVE_FLOAT_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: ieeefp.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 1 stdout: # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" # 1 "" 1 # 1 "" 3 # 384 "" 3 # 1 "" 1 # 1 "" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/confdefs.h" 1 # 2 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conffix.h" 1 # 3 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" 2 stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:3:10: fatal error: 'ieeefp.h' file not found #include ^~~~~~~~~~ 1 error generated. Source: #include "confdefs.h" #include "conffix.h" #include Preprocess output before filtering: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:3:10: fatal error: 'ieeefp.h' file not found #include ^~~~~~~~~~ 1 error generated. : Preprocess output after filtering: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:3:10: fatal error: 'ieeefp.h' file not found #include ^~~~~~~~~~ 1 error generated.: ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: stdint.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Preprocess output before filtering: : Preprocess output after filtering: : Defined "HAVE_STDINT_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: pthread.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Preprocess output before filtering: : Preprocess output after filtering: : Defined "HAVE_PTHREAD_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: inttypes.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Preprocess output before filtering: : Preprocess output after filtering: : Defined "HAVE_INTTYPES_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: immintrin.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Preprocess output before filtering: : Preprocess output after filtering: : Defined "HAVE_IMMINTRIN_H" to "1" ============================================================================================= TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: zmmintrin.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 1 stdout: # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" # 1 "" 1 # 1 "" 3 # 384 "" 3 # 1 "" 1 # 1 "" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/confdefs.h" 1 # 2 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conffix.h" 1 # 3 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" 2 stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:3:10: fatal error: 'zmmintrin.h' file not found #include ^~~~~~~~~~~~~ 1 error generated. Source: #include "confdefs.h" #include "conffix.h" #include Preprocess output before filtering: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:3:10: fatal error: 'zmmintrin.h' file not found #include ^~~~~~~~~~~~~ 1 error generated. : Preprocess output after filtering: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:3:10: fatal error: 'zmmintrin.h' file not found #include ^~~~~~~~~~~~~ 1 error generated.: ============================================================================================= TESTING: checkRecursiveMacros from config.headers(config/BuildSystem/config/headers.py:218) Checks that the preprocessor allows recursive macros, and if not defines HAVE_BROKEN_RECURSIVE_MACRO ===== Checking compiler Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" void a(int i, int j) {} #define a(b) a(b,__LINE__) int main() { a(0); ; return 0; } child config.headers took 2.277622 seconds ============================================================================================= TESTING: configureCacheDetails from config.utilities.cacheDetails(config/BuildSystem/config/utilities/cacheDetails.py:78) Try to determine the size and associativity of the cache. ===== Checking compiler Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails/conftest.c Possible ERROR while running compiler: exit code 1 stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails/conftest.c:4:60: error: use of undeclared identifier '_SC_LEVEL1_DCACHE_LINESIZE'; did you mean 'getconf_LEVEL1_DCACHE_LINESIZE'? long getconf_LEVEL1_DCACHE_LINESIZE() { long val = sysconf(_SC_LEVEL1_DCACHE_LINESIZE); return (16 <= val && val <= 2147483647) ? val : 32; } ^~~~~~~~~~~~~~~~~~~~~~~~~~ getconf_LEVEL1_DCACHE_LINESIZE /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails/conftest.c:4:6: note: 'getconf_LEVEL1_DCACHE_LINESIZE' declared here long getconf_LEVEL1_DCACHE_LINESIZE() { long val = sysconf(_SC_LEVEL1_DCACHE_LINESIZE); return (16 <= val && val <= 2147483647) ? val : 32; } ^ 1 error generated. Source: #include "confdefs.h" #include "conffix.h" #include long getconf_LEVEL1_DCACHE_LINESIZE() { long val = sysconf(_SC_LEVEL1_DCACHE_LINESIZE); return (16 <= val && val <= 2147483647) ? val : 32; } int main() { ; return 0; } ===== Checking compiler Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include long getconf_LEVEL1_DCACHE_LINESIZE() { long val=-1; FILE *f = popen("getconf LEVEL1_DCACHE_LINESIZE","r"); fscanf(f,"%ld",&val); pclose(f); return (16 <= val && val <= 2147483647) ? val : 32; } int main() { ; return 0; } ======== Checking running linked program ===== Checking linker Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include long getconf_LEVEL1_DCACHE_LINESIZE() { long val=-1; FILE *f = popen("getconf LEVEL1_DCACHE_LINESIZE","r"); fscanf(f,"%ld",&val); pclose(f); return (16 <= val && val <= 2147483647) ? val : 32; } int main() { FILE *output = fopen("conftestval","w"); if (!output) return 1; fprintf(output,"%ld",getconf_LEVEL1_DCACHE_LINESIZE()); fclose(output);; return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails/conftest.o -ldl Testing executable /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails/conftest to see if it can be run Executing: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails/conftest Running Executable with threads to time it out at 60 Executing: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails/conftest Defined "LEVEL1_DCACHE_LINESIZE" to "32" child config.utilities.cacheDetails took 1.067005 seconds ============================================================================================= TESTING: check_struct_sigaction from config.types(config/BuildSystem/config/types.py:42) Checks if "struct sigaction" exists in signal.h. This check is for C89 check. Checking for type: struct sigaction ===== Checking compiler Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types/conftest.c Possible ERROR while running compiler: stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types/conftest.c:11:18: warning: unused variable 'a' [-Wunused-variable] struct sigaction a;; ^ 1 warning generated. Source: #include "confdefs.h" #include "conffix.h" #include #include #include #include int main() { struct sigaction a;; return 0; } struct sigaction found Defined "HAVE_STRUCT_SIGACTION" to "1" ============================================================================================= TESTING: check__int64 from config.types(config/BuildSystem/config/types.py:48) Checks if __int64 exists. This is primarily for windows. Checking for type: __int64 ===== Checking compiler Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types/conftest.c Possible ERROR while running compiler: exit code 1 stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types/conftest.c:11:1: error: unknown type name '__int64'; did you mean '__int64_t'? __int64 a;; ^~~~~~~ __int64_t /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/arm/_types.h:22:33: note: '__int64_t' declared here typedef long long __int64_t; ^ 1 error generated. Source: #include "confdefs.h" #include "conffix.h" #include #include #include int main() { __int64 a;; return 0; } __int64 found ============================================================================================= TESTING: checkSizeTypes from config.types(config/BuildSystem/config/types.py:54) Checks for types associated with sizes, such as size_t. Checking for type: size_t ===== Checking compiler Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types/conftest.c Possible ERROR while running compiler: stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types/conftest.c:11:8: warning: unused variable 'a' [-Wunused-variable] size_t a;; ^ 1 warning generated. Source: #include "confdefs.h" #include "conffix.h" #include #include #include int main() { size_t a;; return 0; } size_t found ============================================================================================= TESTING: checkFileTypes from config.types(config/BuildSystem/config/types.py:64) Checks for types associated with files, such as mode_t, off_t, etc. Checking for type: mode_t ===== Checking compiler Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types/conftest.c Possible ERROR while running compiler: stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types/conftest.c:11:8: warning: unused variable 'a' [-Wunused-variable] mode_t a;; ^ 1 warning generated. Source: #include "confdefs.h" #include "conffix.h" #include #include #include int main() { mode_t a;; return 0; } mode_t found Checking for type: off_t ===== Checking compiler Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types/conftest.c Possible ERROR while running compiler: stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types/conftest.c:11:7: warning: unused variable 'a' [-Wunused-variable] off_t a;; ^ 1 warning generated. Source: #include "confdefs.h" #include "conffix.h" #include #include #include int main() { off_t a;; return 0; } off_t found ============================================================================================= TESTING: checkIntegerTypes from config.types(config/BuildSystem/config/types.py:59) Checks for types associated with integers, such as int32_t. Checking for type: int32_t ===== Checking compiler Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types/conftest.c Possible ERROR while running compiler: stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types/conftest.c:11:9: warning: unused variable 'a' [-Wunused-variable] int32_t a;; ^ 1 warning generated. Source: #include "confdefs.h" #include "conffix.h" #include #include #include int main() { int32_t a;; return 0; } int32_t found ============================================================================================= TESTING: checkPID from config.types(config/BuildSystem/config/types.py:70) Checks for pid_t, and defines it if necessary Checking for type: pid_t ===== Checking compiler Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types/conftest.c Possible ERROR while running compiler: stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types/conftest.c:11:7: warning: unused variable 'a' [-Wunused-variable] pid_t a;; ^ 1 warning generated. Source: #include "confdefs.h" #include "conffix.h" #include #include #include int main() { pid_t a;; return 0; } pid_t found ============================================================================================= TESTING: checkUID from config.types(config/BuildSystem/config/types.py:74) Checks for uid_t and gid_t, and defines them if necessary Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types/conftest.c ============================================================================================= TESTING: checkC99Complex from config.types(config/BuildSystem/config/types.py:81) Check for complex numbers in in C99 std Note that since PETSc source code uses _Complex we test specifically for that, not complex ===== Checking compiler Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { double _Complex x; x = I; ; return 0; } ===== Checking linker Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { double _Complex x; x = I; ; return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types/conftest.o -ldl ===== Checking compiler Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #define _GNU_SOURCE #include int main() { double _Complex x; x = I; ; return 0; } Defined "HAVE_C99_COMPLEX" to "1" ============================================================================================= TESTING: checkConst from config.types(config/BuildSystem/config/types.py:106) Checks for working const, and if not found defines it to empty string ===== Checking compiler Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types/conftest.c Possible ERROR while running compiler: stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types/conftest.c:24:16: warning: if statement has empty body [-Wempty-body] if (zero.x); ^ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types/conftest.c:24:16: note: put the semicolon on a separate line to silence this warning /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types/conftest.c:25:14: warning: if statement has empty body [-Wempty-body] if (x[0]); ^ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types/conftest.c:25:14: note: put the semicolon on a separate line to silence this warning /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types/conftest.c:31:14: warning: if statement has empty body [-Wempty-body] if (*s); ^ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types/conftest.c:31:14: note: put the semicolon on a separate line to silence this warning /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types/conftest.c:52:15: warning: if statement has empty body [-Wempty-body] if (foo); ^ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types/conftest.c:52:15: note: put the semicolon on a separate line to silence this warning /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types/conftest.c:46:20: warning: variable 'b' is uninitialized when used here [-Wuninitialized] struct s *b; b->j = 5; ^ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types/conftest.c:46:18: note: initialize the variable 'b' to silence this warning struct s *b; b->j = 5; ^ = 0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types/conftest.c:30:8: warning: variable 't' is uninitialized when used here [-Wuninitialized] *t++ = 0; ^ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types/conftest.c:27:14: note: initialize the variable 't' to silence this warning char *t; ^ = 0 6 warnings generated. Source: #include "confdefs.h" #include "conffix.h" int main() { /* Ultrix mips cc rejects this. */ typedef int charset[2]; const charset x; /* SunOS 4.1.1 cc rejects this. */ char const *const *ccp; char **p; /* NEC SVR4.0.2 mips cc rejects this. */ struct point {int x, y;}; static struct point const zero = {0,0}; /* AIX XL C 1.02.0.0 rejects this. It does not let you subtract one const X* pointer from another in an arm of an if-expression whose if-part is not a constant expression */ const char *g = "string"; ccp = &g + (g ? g-g : 0); /* HPUX 7.0 cc rejects these. */ ++ccp; p = (char**) ccp; ccp = (char const *const *) p; /* This section avoids unused variable warnings */ if (zero.x); if (x[0]); { /* SCO 3.2v4 cc rejects this. */ char *t; char const *s = 0 ? (char *) 0 : (char const *) 0; *t++ = 0; if (*s); } { /* Someone thinks the Sun supposedly-ANSI compiler will reject this. */ int x[] = {25, 17}; const int *foo = &x[0]; ++foo; } { /* Sun SC1.0 ANSI compiler rejects this -- but not the above. */ typedef const int *iptr; iptr p = 0; ++p; } { /* AIX XL C 1.02.0.0 rejects this saying "k.c", line 2.27: 1506-025 (S) Operand must be a modifiable lvalue. */ struct s { int j; const int *ap[3]; }; struct s *b; b->j = 5; } { /* ULTRIX-32 V3.1 (Rev 9) vcc rejects this */ const int foo = 10; /* Get rid of unused variable warning */ if (foo); } ; return 0; } ============================================================================================= TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:162) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: void * ===== Checking compiler Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #include #include char assert_sizeof[(sizeof(void *)==8)*2-1]; Defined "SIZEOF_VOID_P" to "8" ============================================================================================= TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:162) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: short ===== Checking compiler Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #include #include char assert_sizeof[(sizeof(short)==2)*2-1]; Defined "SIZEOF_SHORT" to "2" ============================================================================================= TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:162) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: int ===== Checking compiler Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #include #include char assert_sizeof[(sizeof(int)==4)*2-1]; Defined "SIZEOF_INT" to "4" ============================================================================================= TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:162) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: long ===== Checking compiler Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #include #include char assert_sizeof[(sizeof(long)==8)*2-1]; Defined "SIZEOF_LONG" to "8" ============================================================================================= TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:162) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: long long ===== Checking compiler Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #include #include char assert_sizeof[(sizeof(long long)==8)*2-1]; Defined "SIZEOF_LONG_LONG" to "8" ============================================================================================= TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:162) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: enum ===== Checking compiler Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #include #include char assert_sizeof[(sizeof(enum{ENUM_DUMMY})==4)*2-1]; Defined "SIZEOF_ENUM" to "4" ============================================================================================= TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:162) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: size_t ===== Checking compiler Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #include #include char assert_sizeof[(sizeof(size_t)==8)*2-1]; Defined "SIZEOF_SIZE_T" to "8" Defined "USING_64BIT_PTR" to "1" ============================================================================================= TESTING: checkVisibility from config.types(config/BuildSystem/config/types.py:196) ===== Checking compiler Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { __attribute__((visibility ("default"))) int foo(void);; return 0; } Defined "USE_VISIBILITY_C" to "1" ============================================================================================= TESTING: checkMaxPathLen from config.types(config/BuildSystem/config/types.py:218) Determining PETSC_MAX_PATH_LEN ===== Checking compiler Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #if defined(MAXPATHLEN) # define PETSC_MAX_PATH_LEN MAXPATHLEN #elif defined(MAX_PATH) # define PETSC_MAX_PATH_LEN MAX_PATH #elif defined(_MAX_PATH) # define PETSC_MAX_PATH_LEN _MAX_PATH #else # define PETSC_MAX_PATH_LEN 4096 #endif #define xstr(s) str(s) #define str(s) #s char petsc_max_path_len[] = xstr(PETSC_MAX_PATH_LEN); int main() { ; return 0; } Preprocessing source: #include "confdefs.h" #include "conffix.h" #include #include #if defined(MAXPATHLEN) # define PETSC_MAX_PATH_LEN MAXPATHLEN #elif defined(MAX_PATH) # define PETSC_MAX_PATH_LEN MAX_PATH #elif defined(_MAX_PATH) # define PETSC_MAX_PATH_LEN _MAX_PATH #else # define PETSC_MAX_PATH_LEN 4096 #endif #define xstr(s) str(s) #define str(s) #s char petsc_max_path_len[] = xstr(PETSC_MAX_PATH_LEN); Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types/conftest.c Defined "MAX_PATH_LEN" to "1024" child config.types took 0.736559 seconds ============================================================================================= TESTING: configureMemAlign from PETSc.options.memAlign(config/PETSc/options/memAlign.py:29) Choose alignment Defined "MEMALIGN" to "16" Memory alignment is 16 child PETSc.options.memAlign took 0.000847 seconds ============================================================================================= TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:167) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [handle_sigfpes] in library ['fpe'] [] ===== Checking linker Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char handle_sigfpes(); static void _check_handle_sigfpes() { handle_sigfpes(); } int main() { _check_handle_sigfpes();; return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.o -lfpe -ldl Possible ERROR while running linker: exit code 1 stderr: ld: library not found for -lfpe clang: error: linker command failed with exit code 1 (use -v to see invocation) Linker output before filtering: ld: library not found for -lfpe clang: error: linker command failed with exit code 1 (use -v to see invocation) : Linker output after filtering: ld: library not found for -lfpe clang: error: linker command failed with exit code 1 (use -v to see invocation): ============================================================================================= TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:167) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [socket] in library ['socket', 'nsl'] [] ===== Checking linker Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char socket(); static void _check_socket() { socket(); } int main() { _check_socket();; return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.o -lsocket -lnsl -ldl Possible ERROR while running linker: exit code 1 stderr: ld: library not found for -lsocket clang: error: linker command failed with exit code 1 (use -v to see invocation) Linker output before filtering: ld: library not found for -lsocket clang: error: linker command failed with exit code 1 (use -v to see invocation) : Linker output after filtering: ld: library not found for -lsocket clang: error: linker command failed with exit code 1 (use -v to see invocation): ============================================================================================= TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:167) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [handle_sigfpes] in library ['fpe'] [] ===== Checking linker Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char handle_sigfpes(); static void _check_handle_sigfpes() { handle_sigfpes(); } int main() { _check_handle_sigfpes();; return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.o -lfpe -ldl Possible ERROR while running linker: exit code 1 stderr: ld: library not found for -lfpe clang: error: linker command failed with exit code 1 (use -v to see invocation) Linker output before filtering: ld: library not found for -lfpe clang: error: linker command failed with exit code 1 (use -v to see invocation) : Linker output after filtering: ld: library not found for -lfpe clang: error: linker command failed with exit code 1 (use -v to see invocation): ============================================================================================= TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:167) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [socket] in library ['socket', 'nsl'] [] ===== Checking linker Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char socket(); static void _check_socket() { socket(); } int main() { _check_socket();; return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.o -lsocket -lnsl -ldl Possible ERROR while running linker: exit code 1 stderr: ld: library not found for -lsocket clang: error: linker command failed with exit code 1 (use -v to see invocation) Linker output before filtering: ld: library not found for -lsocket clang: error: linker command failed with exit code 1 (use -v to see invocation) : Linker output after filtering: ld: library not found for -lsocket clang: error: linker command failed with exit code 1 (use -v to see invocation): ============================================================================================= TESTING: checkMath from config.libraries(config/BuildSystem/config/libraries.py:296) Check for sin() in libm, the math library Checking for functions [sin floor log10 pow] in library [''] [] ===== Checking linker Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include double sin(double); static void _check_sin() { double x,y; scanf("%lf",&x); y = sin(x); printf("%f",y); ; } #include double floor(double); static void _check_floor() { double x,y; scanf("%lf",&x); y = floor(x); printf("%f",y); ; } #include double log10(double); static void _check_log10() { double x,y; scanf("%lf",&x); y = log10(x); printf("%f",y); ; } #include double pow(double, double); static void _check_pow() { double x,y; scanf("%lf",&x); y = pow(x,x); printf("%f",y); ; } int main() { _check_sin(); _check_floor(); _check_log10(); _check_pow();; return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.o -ldl ===== Checking compiler Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include double sin(double); static void _check_sin() { double x,y; scanf("%lf",&x); y = sin(x); printf("%f",y); ; } #include double floor(double); static void _check_floor() { double x,y; scanf("%lf",&x); y = floor(x); printf("%f",y); ; } #include double log10(double); static void _check_log10() { double x,y; scanf("%lf",&x); y = log10(x); printf("%f",y); ; } #include double pow(double, double); static void _check_pow() { double x,y; scanf("%lf",&x); y = pow(x,x); printf("%f",y); ; } void dummy(void) {_check_sin(); _check_floor(); _check_log10(); _check_pow();} ===== Checking linker Executing: gfortran -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -fPIC -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.F90 Successful compile: Source: program main print*,'testing' stop end Executing: gfortran -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/confc.o -ldl CheckMath: using math library [] ============================================================================================= TESTING: checkMathErf from config.libraries(config/BuildSystem/config/libraries.py:315) Check for erf() in libm, the math library Checking for functions [erf] in library [] [] ===== Checking linker Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_erf() { double (*checkErf)(double) = erf;double x = 0,y; y = (*checkErf)(x); } int main() { _check_erf();; return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.o -ldl ===== Checking compiler Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_erf() { double (*checkErf)(double) = erf;double x = 0,y; y = (*checkErf)(x); } void dummy(void) {_check_erf();} ===== Checking linker Executing: gfortran -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -fPIC -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.F90 Successful compile: Source: program main print*,'testing' stop end Executing: gfortran -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/confc.o -ldl erf() found Defined "HAVE_ERF" to "1" ============================================================================================= TESTING: checkMathTgamma from config.libraries(config/BuildSystem/config/libraries.py:324) Check for tgamma() in libm, the math library Checking for functions [tgamma] in library [] [] ===== Checking linker Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_tgamma() { double (*checkTgamma)(double) = tgamma;double x = 0,y; y = (*checkTgamma)(x); } int main() { _check_tgamma();; return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.o -ldl ===== Checking compiler Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_tgamma() { double (*checkTgamma)(double) = tgamma;double x = 0,y; y = (*checkTgamma)(x); } void dummy(void) {_check_tgamma();} ===== Checking linker Executing: gfortran -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -fPIC -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.F90 Successful compile: Source: program main print*,'testing' stop end Executing: gfortran -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/confc.o -ldl tgamma() found Defined "HAVE_TGAMMA" to "1" ============================================================================================= TESTING: checkMathLgamma from config.libraries(config/BuildSystem/config/libraries.py:333) Check for lgamma() in libm, the math library Checking for functions [lgamma] in library [] [] ===== Checking linker Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include #include static void _check_lgamma() { double (*checkLgamma)(double) = lgamma;double x = 1,y; y = (*checkLgamma)(x);if (y != 0.) abort(); } int main() { _check_lgamma();; return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.o -ldl ===== Checking compiler Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include #include static void _check_lgamma() { double (*checkLgamma)(double) = lgamma;double x = 1,y; y = (*checkLgamma)(x);if (y != 0.) abort(); } void dummy(void) {_check_lgamma();} ===== Checking linker Executing: gfortran -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -fPIC -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.F90 Successful compile: Source: program main print*,'testing' stop end Executing: gfortran -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/confc.o -ldl lgamma() found Defined "HAVE_LGAMMA" to "1" ============================================================================================= TESTING: checkMathFenv from config.libraries(config/BuildSystem/config/libraries.py:346) Checks if can be used with FE_DFL_ENV Checking for functions [fesetenv] in library [] [] ===== Checking linker Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_fesetenv() { fesetenv(FE_DFL_ENV);; } int main() { _check_fesetenv();; return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.o -ldl ===== Checking compiler Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_fesetenv() { fesetenv(FE_DFL_ENV);; } void dummy(void) {_check_fesetenv();} ===== Checking linker Executing: gfortran -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -fPIC -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.F90 Successful compile: Source: program main print*,'testing' stop end Executing: gfortran -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/confc.o -ldl Defined "HAVE_FENV_H" to "1" ============================================================================================= TESTING: checkMathLog2 from config.libraries(config/BuildSystem/config/libraries.py:354) Check for log2() in libm, the math library Checking for functions [log2] in library [] [] ===== Checking linker Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.c Possible ERROR while running compiler: stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.c:5:81: warning: unused variable 'y' [-Wunused-variable] static void _check_log2() { double (*checkLog2)(double) = log2; double x = 2.5, y = (*checkLog2)(x); } ^ 1 warning generated. Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_log2() { double (*checkLog2)(double) = log2; double x = 2.5, y = (*checkLog2)(x); } int main() { _check_log2();; return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.o -ldl ===== Checking compiler Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.c Possible ERROR while running compiler: stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.c:5:81: warning: unused variable 'y' [-Wunused-variable] static void _check_log2() { double (*checkLog2)(double) = log2; double x = 2.5, y = (*checkLog2)(x); } ^ 1 warning generated. Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_log2() { double (*checkLog2)(double) = log2; double x = 2.5, y = (*checkLog2)(x); } void dummy(void) {_check_log2();} ===== Checking linker Executing: gfortran -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -fPIC -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.F90 Successful compile: Source: program main print*,'testing' stop end Executing: gfortran -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/confc.o -ldl log2() found Defined "HAVE_LOG2" to "1" ============================================================================================= TESTING: checkRealtime from config.libraries(config/BuildSystem/config/libraries.py:363) Check for presence of clock_gettime() in realtime library (POSIX Realtime extensions) Checking for functions [clock_gettime] in library [''] [] ===== Checking linker Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_clock_gettime() { struct timespec tp; clock_gettime(CLOCK_REALTIME,&tp);; } int main() { _check_clock_gettime();; return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.o -ldl ===== Checking compiler Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_clock_gettime() { struct timespec tp; clock_gettime(CLOCK_REALTIME,&tp);; } void dummy(void) {_check_clock_gettime();} ===== Checking linker Executing: gfortran -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -fPIC -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.F90 Successful compile: Source: program main print*,'testing' stop end Executing: gfortran -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/confc.o -ldl realtime functions are linked in by default ============================================================================================= TESTING: checkDynamic from config.libraries(config/BuildSystem/config/libraries.py:379) Check for the header and libraries necessary for dynamic library manipulation Checking for functions [dlopen] in library ['dl'] [] ===== Checking linker Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dlopen(); static void _check_dlopen() { dlopen(); } int main() { _check_dlopen();; return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.o -ldl -ldl ===== Checking compiler Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dlopen(); static void _check_dlopen() { dlopen(); } void dummy(void) {_check_dlopen();} ===== Checking linker Executing: gfortran -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -fPIC -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.F90 Successful compile: Source: program main print*,'testing' stop end Executing: gfortran -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/confc.o -ldl -ldl Defined "HAVE_LIBDL" to "1" Checking for header: dlfcn.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Preprocess output before filtering: : Preprocess output after filtering: : Defined "HAVE_DLFCN_H" to "1" child config.libraries took 1.510793 seconds ============================================================================================= TESTING: configureLibraryOptions from PETSc.options.libraryOptions(config/PETSc/options/libraryOptions.py:38) Sets PETSC_USE_DEBUG, PETSC_USE_INFO, PETSC_USE_LOG, PETSC_USE_CTABLE, PETSC_USE_FORTRAN_KERNELS, and PETSC_USE_AVX512_KERNELS Defined "USE_LOG" to "1" Defined "USE_DEBUG" to "1" Defined "USE_INFO" to "1" Defined "USE_CTABLE" to "1" **********Checking if running on BGL/IBM detected Checking for functions [bgl_perfctr_void] in library [''] [] ===== Checking linker Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char bgl_perfctr_void(); static void _check_bgl_perfctr_void() { bgl_perfctr_void(); } int main() { _check_bgl_perfctr_void();; return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.o -ldl Possible ERROR while running linker: exit code 1 stderr: Undefined symbols for architecture arm64: "_bgl_perfctr_void", referenced from: __check_bgl_perfctr_void in conftest.o ld: symbol(s) not found for architecture arm64 clang: error: linker command failed with exit code 1 (use -v to see invocation) Linker output before filtering: Undefined symbols for architecture arm64: "_bgl_perfctr_void", referenced from: __check_bgl_perfctr_void in conftest.o ld: symbol(s) not found for architecture arm64 clang: error: linker command failed with exit code 1 (use -v to see invocation) : Linker output after filtering: Undefined symbols for architecture arm64: "_bgl_perfctr_void", referenced from: __check_bgl_perfctr_void in conftest.o ld: symbol(s) not found for architecture arm64 clang: error: linker command failed with exit code 1 (use -v to see invocation): Checking for functions [ADIOI_BGL_Open] in library [''] [] ===== Checking linker Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char ADIOI_BGL_Open(); static void _check_ADIOI_BGL_Open() { ADIOI_BGL_Open(); } int main() { _check_ADIOI_BGL_Open();; return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.o -ldl Possible ERROR while running linker: exit code 1 stderr: Undefined symbols for architecture arm64: "_ADIOI_BGL_Open", referenced from: __check_ADIOI_BGL_Open in conftest.o ld: symbol(s) not found for architecture arm64 clang: error: linker command failed with exit code 1 (use -v to see invocation) Linker output before filtering: Undefined symbols for architecture arm64: "_ADIOI_BGL_Open", referenced from: __check_ADIOI_BGL_Open in conftest.o ld: symbol(s) not found for architecture arm64 clang: error: linker command failed with exit code 1 (use -v to see invocation) : Linker output after filtering: Undefined symbols for architecture arm64: "_ADIOI_BGL_Open", referenced from: __check_ADIOI_BGL_Open in conftest.o ld: symbol(s) not found for architecture arm64 clang: error: linker command failed with exit code 1 (use -v to see invocation): *********BGL/IBM test failure Defined "USE_BACKWARD_LOOP" to "1" Defined "USE_AVX512_KERNELS" to "1" Defined "Alignx(a,b)" to " " ============================================================================================= TESTING: configureISColorValueType from PETSc.options.libraryOptions(config/PETSc/options/libraryOptions.py:99) Sets PETSC_IS_COLORING_VALUE_TYPE, PETSC_MPIU_IS_COLORING_VALUE_TYPE, and PETSC_IS_COLORING_MAX as required by ISColoring Defined "MPIU_IS_COLORING_VALUE_TYPE" to "MPI_UNSIGNED_SHORT" Defined "IS_COLORING_MAX" to "USHRT_MAX" Defined "IS_COLORING_VALUE_TYPE" to "short" Defined "IS_COLORING_VALUE_TYPE_F" to "integer2" child PETSc.options.libraryOptions took 0.124702 seconds child config.atomics took 0.000003 seconds ============================================================================================= TESTING: checkSysinfo from config.functions(config/BuildSystem/config/functions.py:106) Check whether sysinfo takes three arguments, and if it does define HAVE_SYSINFO_3ARG Checking for functions [sysinfo] ===== Checking linker Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char sysinfo(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_sysinfo) || defined (__stub___sysinfo) sysinfo_will_always_fail_with_ENOSYS(); #else sysinfo(); #endif ; return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.o -ldl Possible ERROR while running linker: exit code 1 stderr: Undefined symbols for architecture arm64: "_sysinfo", referenced from: _main in conftest.o ld: symbol(s) not found for architecture arm64 clang: error: linker command failed with exit code 1 (use -v to see invocation) Linker output before filtering: Undefined symbols for architecture arm64: "_sysinfo", referenced from: _main in conftest.o ld: symbol(s) not found for architecture arm64 clang: error: linker command failed with exit code 1 (use -v to see invocation) : Linker output after filtering: Undefined symbols for architecture arm64: "_sysinfo", referenced from: _main in conftest.o ld: symbol(s) not found for architecture arm64 clang: error: linker command failed with exit code 1 (use -v to see invocation): ============================================================================================= TESTING: checkVPrintf from config.functions(config/BuildSystem/config/functions.py:125) Checks whether vprintf requires a char * last argument, and if it does defines HAVE_VPRINTF_CHAR ===== Checking linker Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.c Possible ERROR while running compiler: stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.c:8:16: warning: variable 'Argp' is uninitialized when used here [-Wuninitialized] vprintf( "%d", Argp ); ^~~~ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.c:7:13: note: initialize the variable 'Argp' to silence this warning va_list Argp; ^ = NULL 1 warning generated. Source: #include "confdefs.h" #include "conffix.h" #include #include int main() { va_list Argp; vprintf( "%d", Argp ); ; return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.o -ldl ============================================================================================= TESTING: checkVFPrintf from config.functions(config/BuildSystem/config/functions.py:131) Checks whether vfprintf requires a char * last argument, and if it does defines HAVE_VFPRINTF_CHAR ===== Checking linker Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.c Possible ERROR while running compiler: stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.c:8:24: warning: variable 'Argp' is uninitialized when used here [-Wuninitialized] vfprintf(stdout, "%d", Argp ); ^~~~ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.c:7:13: note: initialize the variable 'Argp' to silence this warning va_list Argp; ^ = NULL 1 warning generated. Source: #include "confdefs.h" #include "conffix.h" #include #include int main() { va_list Argp; vfprintf(stdout, "%d", Argp ); ; return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.o -ldl ============================================================================================= TESTING: checkVSNPrintf from config.functions(config/BuildSystem/config/functions.py:137) Checks whether vsnprintf requires a char * last argument, and if it does defines HAVE_VSNPRINTF_CHAR ===== Checking linker Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.c Possible ERROR while running compiler: stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.c:8:24: warning: variable 'Argp' is uninitialized when used here [-Wuninitialized] vsnprintf(str,5, "%d", Argp ); ^~~~ /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include/secure/_stdio.h:75:71: note: expanded from macro 'vsnprintf' __builtin___vsnprintf_chk (str, len, 0, __darwin_obsz(str), format, ap) ^~ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.c:7:13: note: initialize the variable 'Argp' to silence this warning va_list Argp;char str[6]; ^ = NULL 1 warning generated. Source: #include "confdefs.h" #include "conffix.h" #include #include int main() { va_list Argp;char str[6]; vsnprintf(str,5, "%d", Argp ); ; return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.o -ldl Defined "HAVE_VSNPRINTF" to "1" ============================================================================================= TESTING: checkNanosleep from config.functions(config/BuildSystem/config/functions.py:167) Check for functional nanosleep() - as time.h behaves differently for different compiler flags - like -std=c89 ===== Checking linker Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { struct timespec tp; tp.tv_sec = 0; tp.tv_nsec = (long)(1e9); nanosleep(&tp,0); ; return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.o -ldl Defined "HAVE_NANOSLEEP" to "1" ============================================================================================= TESTING: checkMemmove from config.functions(config/BuildSystem/config/functions.py:173) Check for functional memmove() - as MS VC requires correct includes to for this test ===== Checking linker Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { char c1[1], c2[1] = "c"; size_t n=1; memmove(c1,c2,n); ; return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.o -ldl Defined "HAVE_MEMMOVE" to "1" ============================================================================================= TESTING: checkFreeReturnType from config.functions(config/BuildSystem/config/functions.py:153) Checks whether free returns void or int, and defines HAVE_FREE_RETURN_INT ===== Checking linker Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.c Possible ERROR while running compiler: exit code 1 stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.c:6:25: error: assigning to 'int' from incompatible type 'void' int ierr; void *p; ierr = free(p); return 0; ^ ~~~~~~~ 1 error generated. Source: #include "confdefs.h" #include "conffix.h" #include int main() { int ierr; void *p; ierr = free(p); return 0; ; return 0; } Compile failed inside link ============================================================================================= TESTING: checkVariableArgumentLists from config.functions(config/BuildSystem/config/functions.py:159) Checks whether the variable argument list functionality is working ===== Checking linker Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { va_list l1, l2; va_copy(l1, l2); return 0; ; return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.o -ldl Defined "HAVE_VA_COPY" to "1" ============================================================================================= TESTING: checkClassify from config.functions(config/BuildSystem/config/functions.py:85) Recursive decompose to rapidly classify functions as found or missing To confirm that a function is missing, we require a compile/link failure with only that function in a compilation unit. In contrast, we can confirm that many functions are present by compiling them all together in a large compilation unit. We optimistically compile everything together, then trim all functions that were named in the error message and bisect the result. The trimming is only an optimization to increase the likelihood of a big-batch compile succeeding; we do not rely on the compiler naming missing functions. Checking for functions [getpagesize access PXFGETARG _snprintf bzero lseek _access getcwd dlerror _mkdir _set_output_format stricmp gethostbyname drand48 clock readlink dlopen gethostname memalign _pipe sleep rand strcasecmp popen fork sbreak dlsym dlclose socket getrusage _lseek getdomainname usleep uname time fpresetsticky _getcwd fpsetsticky realpath getwd _sleep snprintf] ===== Checking linker Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.c Possible ERROR while running compiler: stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.c:17:6: warning: incompatible redeclaration of library function 'bzero' [-Wincompatible-library-redeclaration] char bzero(); ^ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.c:17:6: note: 'bzero' is a builtin with type 'void (void *, unsigned long)' /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.c:35:6: warning: incompatible redeclaration of library function 'strcasecmp' [-Wincompatible-library-redeclaration] char strcasecmp(); ^ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.c:35:6: note: 'strcasecmp' is a builtin with type 'int (const char *, const char *)' /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.c:54:6: warning: incompatible redeclaration of library function 'snprintf' [-Wincompatible-library-redeclaration] char snprintf(); ^ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.c:54:6: note: 'snprintf' is a builtin with type 'int (char *, unsigned long, const char *, ...)' 3 warnings generated. Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char getpagesize(); char access(); char PXFGETARG(); char _snprintf(); char bzero(); char lseek(); char _access(); char getcwd(); char dlerror(); char _mkdir(); char _set_output_format(); char stricmp(); char gethostbyname(); char drand48(); char clock(); char readlink(); char dlopen(); char gethostname(); char memalign(); char _pipe(); char sleep(); char rand(); char strcasecmp(); char popen(); char fork(); char sbreak(); char dlsym(); char dlclose(); char socket(); char getrusage(); char _lseek(); char getdomainname(); char usleep(); char uname(); char time(); char fpresetsticky(); char _getcwd(); char fpsetsticky(); char realpath(); char getwd(); char _sleep(); char snprintf(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_getpagesize) || defined (__stub___getpagesize) getpagesize_will_always_fail_with_ENOSYS(); #else getpagesize(); #endif #if defined (__stub_access) || defined (__stub___access) access_will_always_fail_with_ENOSYS(); #else access(); #endif #if defined (__stub_PXFGETARG) || defined (__stub___PXFGETARG) PXFGETARG_will_always_fail_with_ENOSYS(); #else PXFGETARG(); #endif #if defined (__stub__snprintf) || defined (__stub____snprintf) _snprintf_will_always_fail_with_ENOSYS(); #else _snprintf(); #endif #if defined (__stub_bzero) || defined (__stub___bzero) bzero_will_always_fail_with_ENOSYS(); #else bzero(); #endif #if defined (__stub_lseek) || defined (__stub___lseek) lseek_will_always_fail_with_ENOSYS(); #else lseek(); #endif #if defined (__stub__access) || defined (__stub____access) _access_will_always_fail_with_ENOSYS(); #else _access(); #endif #if defined (__stub_getcwd) || defined (__stub___getcwd) getcwd_will_always_fail_with_ENOSYS(); #else getcwd(); #endif #if defined (__stub_dlerror) || defined (__stub___dlerror) dlerror_will_always_fail_with_ENOSYS(); #else dlerror(); #endif #if defined (__stub__mkdir) || defined (__stub____mkdir) _mkdir_will_always_fail_with_ENOSYS(); #else _mkdir(); #endif #if defined (__stub__set_output_format) || defined (__stub____set_output_format) _set_output_format_will_always_fail_with_ENOSYS(); #else _set_output_format(); #endif #if defined (__stub_stricmp) || defined (__stub___stricmp) stricmp_will_always_fail_with_ENOSYS(); #else stricmp(); #endif #if defined (__stub_gethostbyname) || defined (__stub___gethostbyname) gethostbyname_will_always_fail_with_ENOSYS(); #else gethostbyname(); #endif #if defined (__stub_drand48) || defined (__stub___drand48) drand48_will_always_fail_with_ENOSYS(); #else drand48(); #endif #if defined (__stub_clock) || defined (__stub___clock) clock_will_always_fail_with_ENOSYS(); #else clock(); #endif #if defined (__stub_readlink) || defined (__stub___readlink) readlink_will_always_fail_with_ENOSYS(); #else readlink(); #endif #if defined (__stub_dlopen) || defined (__stub___dlopen) dlopen_will_always_fail_with_ENOSYS(); #else dlopen(); #endif #if defined (__stub_gethostname) || defined (__stub___gethostname) gethostname_will_always_fail_with_ENOSYS(); #else gethostname(); #endif #if defined (__stub_memalign) || defined (__stub___memalign) memalign_will_always_fail_with_ENOSYS(); #else memalign(); #endif #if defined (__stub__pipe) || defined (__stub____pipe) _pipe_will_always_fail_with_ENOSYS(); #else _pipe(); #endif #if defined (__stub_sleep) || defined (__stub___sleep) sleep_will_always_fail_with_ENOSYS(); #else sleep(); #endif #if defined (__stub_rand) || defined (__stub___rand) rand_will_always_fail_with_ENOSYS(); #else rand(); #endif #if defined (__stub_strcasecmp) || defined (__stub___strcasecmp) strcasecmp_will_always_fail_with_ENOSYS(); #else strcasecmp(); #endif #if defined (__stub_popen) || defined (__stub___popen) popen_will_always_fail_with_ENOSYS(); #else popen(); #endif #if defined (__stub_fork) || defined (__stub___fork) fork_will_always_fail_with_ENOSYS(); #else fork(); #endif #if defined (__stub_sbreak) || defined (__stub___sbreak) sbreak_will_always_fail_with_ENOSYS(); #else sbreak(); #endif #if defined (__stub_dlsym) || defined (__stub___dlsym) dlsym_will_always_fail_with_ENOSYS(); #else dlsym(); #endif #if defined (__stub_dlclose) || defined (__stub___dlclose) dlclose_will_always_fail_with_ENOSYS(); #else dlclose(); #endif #if defined (__stub_socket) || defined (__stub___socket) socket_will_always_fail_with_ENOSYS(); #else socket(); #endif #if defined (__stub_getrusage) || defined (__stub___getrusage) getrusage_will_always_fail_with_ENOSYS(); #else getrusage(); #endif #if defined (__stub__lseek) || defined (__stub____lseek) _lseek_will_always_fail_with_ENOSYS(); #else _lseek(); #endif #if defined (__stub_getdomainname) || defined (__stub___getdomainname) getdomainname_will_always_fail_with_ENOSYS(); #else getdomainname(); #endif #if defined (__stub_usleep) || defined (__stub___usleep) usleep_will_always_fail_with_ENOSYS(); #else usleep(); #endif #if defined (__stub_uname) || defined (__stub___uname) uname_will_always_fail_with_ENOSYS(); #else uname(); #endif #if defined (__stub_time) || defined (__stub___time) time_will_always_fail_with_ENOSYS(); #else time(); #endif #if defined (__stub_fpresetsticky) || defined (__stub___fpresetsticky) fpresetsticky_will_always_fail_with_ENOSYS(); #else fpresetsticky(); #endif #if defined (__stub__getcwd) || defined (__stub____getcwd) _getcwd_will_always_fail_with_ENOSYS(); #else _getcwd(); #endif #if defined (__stub_fpsetsticky) || defined (__stub___fpsetsticky) fpsetsticky_will_always_fail_with_ENOSYS(); #else fpsetsticky(); #endif #if defined (__stub_realpath) || defined (__stub___realpath) realpath_will_always_fail_with_ENOSYS(); #else realpath(); #endif #if defined (__stub_getwd) || defined (__stub___getwd) getwd_will_always_fail_with_ENOSYS(); #else getwd(); #endif #if defined (__stub__sleep) || defined (__stub____sleep) _sleep_will_always_fail_with_ENOSYS(); #else _sleep(); #endif #if defined (__stub_snprintf) || defined (__stub___snprintf) snprintf_will_always_fail_with_ENOSYS(); #else snprintf(); #endif ; return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.o -ldl Possible ERROR while running linker: exit code 1 stderr: Undefined symbols for architecture arm64: "_PXFGETARG", referenced from: _main in conftest.o "__access", referenced from: _main in conftest.o "__getcwd", referenced from: _main in conftest.o "__lseek", referenced from: _main in conftest.o "__mkdir", referenced from: _main in conftest.o "__pipe", referenced from: _main in conftest.o "__set_output_format", referenced from: _main in conftest.o "__sleep", referenced from: _main in conftest.o "__snprintf", referenced from: _main in conftest.o "_fpresetsticky", referenced from: _main in conftest.o "_fpsetsticky", referenced from: _main in conftest.o "_memalign", referenced from: _main in conftest.o "_sbreak", referenced from: _main in conftest.o "_stricmp", referenced from: _main in conftest.o ld: symbol(s) not found for architecture arm64 clang: error: linker command failed with exit code 1 (use -v to see invocation) Linker output before filtering: Undefined symbols for architecture arm64: "_PXFGETARG", referenced from: _main in conftest.o "__access", referenced from: _main in conftest.o "__getcwd", referenced from: _main in conftest.o "__lseek", referenced from: _main in conftest.o "__mkdir", referenced from: _main in conftest.o "__pipe", referenced from: _main in conftest.o "__set_output_format", referenced from: _main in conftest.o "__sleep", referenced from: _main in conftest.o "__snprintf", referenced from: _main in conftest.o "_fpresetsticky", referenced from: _main in conftest.o "_fpsetsticky", referenced from: _main in conftest.o "_memalign", referenced from: _main in conftest.o "_sbreak", referenced from: _main in conftest.o "_stricmp", referenced from: _main in conftest.o ld: symbol(s) not found for architecture arm64 clang: error: linker command failed with exit code 1 (use -v to see invocation) : Linker output after filtering: Undefined symbols for architecture arm64: "_PXFGETARG", referenced from: _main in conftest.o "__access", referenced from: _main in conftest.o "__getcwd", referenced from: _main in conftest.o "__lseek", referenced from: _main in conftest.o "__mkdir", referenced from: _main in conftest.o "__pipe", referenced from: _main in conftest.o "__set_output_format", referenced from: _main in conftest.o "__sleep", referenced from: _main in conftest.o "__snprintf", referenced from: _main in conftest.o "_fpresetsticky", referenced from: _main in conftest.o "_fpsetsticky", referenced from: _main in conftest.o "_memalign", referenced from: _main in conftest.o "_sbreak", referenced from: _main in conftest.o "_stricmp", referenced from: _main in conftest.o ld: symbol(s) not found for architecture arm64 clang: error: linker command failed with exit code 1 (use -v to see invocation): Checking for functions [getpagesize bzero dlerror gethostbyname drand48 clock readlink dlopen gethostname rand strcasecmp] ===== Checking linker Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.c Possible ERROR while running compiler: stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.c:14:6: warning: incompatible redeclaration of library function 'bzero' [-Wincompatible-library-redeclaration] char bzero(); ^ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.c:14:6: note: 'bzero' is a builtin with type 'void (void *, unsigned long)' /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.c:23:6: warning: incompatible redeclaration of library function 'strcasecmp' [-Wincompatible-library-redeclaration] char strcasecmp(); ^ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.c:23:6: note: 'strcasecmp' is a builtin with type 'int (const char *, const char *)' 2 warnings generated. Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char getpagesize(); char bzero(); char dlerror(); char gethostbyname(); char drand48(); char clock(); char readlink(); char dlopen(); char gethostname(); char rand(); char strcasecmp(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_getpagesize) || defined (__stub___getpagesize) getpagesize_will_always_fail_with_ENOSYS(); #else getpagesize(); #endif #if defined (__stub_bzero) || defined (__stub___bzero) bzero_will_always_fail_with_ENOSYS(); #else bzero(); #endif #if defined (__stub_dlerror) || defined (__stub___dlerror) dlerror_will_always_fail_with_ENOSYS(); #else dlerror(); #endif #if defined (__stub_gethostbyname) || defined (__stub___gethostbyname) gethostbyname_will_always_fail_with_ENOSYS(); #else gethostbyname(); #endif #if defined (__stub_drand48) || defined (__stub___drand48) drand48_will_always_fail_with_ENOSYS(); #else drand48(); #endif #if defined (__stub_clock) || defined (__stub___clock) clock_will_always_fail_with_ENOSYS(); #else clock(); #endif #if defined (__stub_readlink) || defined (__stub___readlink) readlink_will_always_fail_with_ENOSYS(); #else readlink(); #endif #if defined (__stub_dlopen) || defined (__stub___dlopen) dlopen_will_always_fail_with_ENOSYS(); #else dlopen(); #endif #if defined (__stub_gethostname) || defined (__stub___gethostname) gethostname_will_always_fail_with_ENOSYS(); #else gethostname(); #endif #if defined (__stub_rand) || defined (__stub___rand) rand_will_always_fail_with_ENOSYS(); #else rand(); #endif #if defined (__stub_strcasecmp) || defined (__stub___strcasecmp) strcasecmp_will_always_fail_with_ENOSYS(); #else strcasecmp(); #endif ; return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.o -ldl Defined "HAVE_GETPAGESIZE" to "1" Defined "HAVE_BZERO" to "1" Defined "HAVE_DLERROR" to "1" Defined "HAVE_GETHOSTBYNAME" to "1" Defined "HAVE_DRAND48" to "1" Defined "HAVE_CLOCK" to "1" Defined "HAVE_READLINK" to "1" Defined "HAVE_DLOPEN" to "1" Defined "HAVE_GETHOSTNAME" to "1" Defined "HAVE_RAND" to "1" Defined "HAVE_STRCASECMP" to "1" Checking for functions [popen fork dlsym dlclose socket getrusage getdomainname usleep uname time realpath getwd] ===== Checking linker Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char popen(); char fork(); char dlsym(); char dlclose(); char socket(); char getrusage(); char getdomainname(); char usleep(); char uname(); char time(); char realpath(); char getwd(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_popen) || defined (__stub___popen) popen_will_always_fail_with_ENOSYS(); #else popen(); #endif #if defined (__stub_fork) || defined (__stub___fork) fork_will_always_fail_with_ENOSYS(); #else fork(); #endif #if defined (__stub_dlsym) || defined (__stub___dlsym) dlsym_will_always_fail_with_ENOSYS(); #else dlsym(); #endif #if defined (__stub_dlclose) || defined (__stub___dlclose) dlclose_will_always_fail_with_ENOSYS(); #else dlclose(); #endif #if defined (__stub_socket) || defined (__stub___socket) socket_will_always_fail_with_ENOSYS(); #else socket(); #endif #if defined (__stub_getrusage) || defined (__stub___getrusage) getrusage_will_always_fail_with_ENOSYS(); #else getrusage(); #endif #if defined (__stub_getdomainname) || defined (__stub___getdomainname) getdomainname_will_always_fail_with_ENOSYS(); #else getdomainname(); #endif #if defined (__stub_usleep) || defined (__stub___usleep) usleep_will_always_fail_with_ENOSYS(); #else usleep(); #endif #if defined (__stub_uname) || defined (__stub___uname) uname_will_always_fail_with_ENOSYS(); #else uname(); #endif #if defined (__stub_time) || defined (__stub___time) time_will_always_fail_with_ENOSYS(); #else time(); #endif #if defined (__stub_realpath) || defined (__stub___realpath) realpath_will_always_fail_with_ENOSYS(); #else realpath(); #endif #if defined (__stub_getwd) || defined (__stub___getwd) getwd_will_always_fail_with_ENOSYS(); #else getwd(); #endif ; return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.o -ldl Defined "HAVE_POPEN" to "1" Defined "HAVE_FORK" to "1" Defined "HAVE_DLSYM" to "1" Defined "HAVE_DLCLOSE" to "1" Defined "HAVE_SOCKET" to "1" Defined "HAVE_GETRUSAGE" to "1" Defined "HAVE_GETDOMAINNAME" to "1" Defined "HAVE_USLEEP" to "1" Defined "HAVE_UNAME" to "1" Defined "HAVE_TIME" to "1" Defined "HAVE_REALPATH" to "1" Defined "HAVE_GETWD" to "1" Checking for functions [access] ===== Checking linker Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char access(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_access) || defined (__stub___access) access_will_always_fail_with_ENOSYS(); #else access(); #endif ; return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.o -ldl Defined "HAVE_ACCESS" to "1" Checking for functions [PXFGETARG] ===== Checking linker Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char PXFGETARG(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_PXFGETARG) || defined (__stub___PXFGETARG) PXFGETARG_will_always_fail_with_ENOSYS(); #else PXFGETARG(); #endif ; return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.o -ldl Possible ERROR while running linker: exit code 1 stderr: Undefined symbols for architecture arm64: "_PXFGETARG", referenced from: _main in conftest.o ld: symbol(s) not found for architecture arm64 clang: error: linker command failed with exit code 1 (use -v to see invocation) Linker output before filtering: Undefined symbols for architecture arm64: "_PXFGETARG", referenced from: _main in conftest.o ld: symbol(s) not found for architecture arm64 clang: error: linker command failed with exit code 1 (use -v to see invocation) : Linker output after filtering: Undefined symbols for architecture arm64: "_PXFGETARG", referenced from: _main in conftest.o ld: symbol(s) not found for architecture arm64 clang: error: linker command failed with exit code 1 (use -v to see invocation): Checking for functions [_snprintf] ===== Checking linker Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _snprintf(); #ifdef __cplusplus } #endif int main() { #if defined (__stub__snprintf) || defined (__stub____snprintf) _snprintf_will_always_fail_with_ENOSYS(); #else _snprintf(); #endif ; return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.o -ldl Possible ERROR while running linker: exit code 1 stderr: Undefined symbols for architecture arm64: "__snprintf", referenced from: _main in conftest.o ld: symbol(s) not found for architecture arm64 clang: error: linker command failed with exit code 1 (use -v to see invocation) Linker output before filtering: Undefined symbols for architecture arm64: "__snprintf", referenced from: _main in conftest.o ld: symbol(s) not found for architecture arm64 clang: error: linker command failed with exit code 1 (use -v to see invocation) : Linker output after filtering: Undefined symbols for architecture arm64: "__snprintf", referenced from: _main in conftest.o ld: symbol(s) not found for architecture arm64 clang: error: linker command failed with exit code 1 (use -v to see invocation): Checking for functions [lseek] ===== Checking linker Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char lseek(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_lseek) || defined (__stub___lseek) lseek_will_always_fail_with_ENOSYS(); #else lseek(); #endif ; return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.o -ldl Defined "HAVE_LSEEK" to "1" Checking for functions [_access] ===== Checking linker Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _access(); #ifdef __cplusplus } #endif int main() { #if defined (__stub__access) || defined (__stub____access) _access_will_always_fail_with_ENOSYS(); #else _access(); #endif ; return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.o -ldl Possible ERROR while running linker: exit code 1 stderr: Undefined symbols for architecture arm64: "__access", referenced from: _main in conftest.o ld: symbol(s) not found for architecture arm64 clang: error: linker command failed with exit code 1 (use -v to see invocation) Linker output before filtering: Undefined symbols for architecture arm64: "__access", referenced from: _main in conftest.o ld: symbol(s) not found for architecture arm64 clang: error: linker command failed with exit code 1 (use -v to see invocation) : Linker output after filtering: Undefined symbols for architecture arm64: "__access", referenced from: _main in conftest.o ld: symbol(s) not found for architecture arm64 clang: error: linker command failed with exit code 1 (use -v to see invocation): Checking for functions [getcwd] ===== Checking linker Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char getcwd(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_getcwd) || defined (__stub___getcwd) getcwd_will_always_fail_with_ENOSYS(); #else getcwd(); #endif ; return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.o -ldl Defined "HAVE_GETCWD" to "1" Checking for functions [_mkdir] ===== Checking linker Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _mkdir(); #ifdef __cplusplus } #endif int main() { #if defined (__stub__mkdir) || defined (__stub____mkdir) _mkdir_will_always_fail_with_ENOSYS(); #else _mkdir(); #endif ; return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.o -ldl Possible ERROR while running linker: exit code 1 stderr: Undefined symbols for architecture arm64: "__mkdir", referenced from: _main in conftest.o ld: symbol(s) not found for architecture arm64 clang: error: linker command failed with exit code 1 (use -v to see invocation) Linker output before filtering: Undefined symbols for architecture arm64: "__mkdir", referenced from: _main in conftest.o ld: symbol(s) not found for architecture arm64 clang: error: linker command failed with exit code 1 (use -v to see invocation) : Linker output after filtering: Undefined symbols for architecture arm64: "__mkdir", referenced from: _main in conftest.o ld: symbol(s) not found for architecture arm64 clang: error: linker command failed with exit code 1 (use -v to see invocation): Checking for functions [_set_output_format] ===== Checking linker Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _set_output_format(); #ifdef __cplusplus } #endif int main() { #if defined (__stub__set_output_format) || defined (__stub____set_output_format) _set_output_format_will_always_fail_with_ENOSYS(); #else _set_output_format(); #endif ; return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.o -ldl Possible ERROR while running linker: exit code 1 stderr: Undefined symbols for architecture arm64: "__set_output_format", referenced from: _main in conftest.o ld: symbol(s) not found for architecture arm64 clang: error: linker command failed with exit code 1 (use -v to see invocation) Linker output before filtering: Undefined symbols for architecture arm64: "__set_output_format", referenced from: _main in conftest.o ld: symbol(s) not found for architecture arm64 clang: error: linker command failed with exit code 1 (use -v to see invocation) : Linker output after filtering: Undefined symbols for architecture arm64: "__set_output_format", referenced from: _main in conftest.o ld: symbol(s) not found for architecture arm64 clang: error: linker command failed with exit code 1 (use -v to see invocation): Checking for functions [stricmp] ===== Checking linker Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char stricmp(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_stricmp) || defined (__stub___stricmp) stricmp_will_always_fail_with_ENOSYS(); #else stricmp(); #endif ; return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.o -ldl Possible ERROR while running linker: exit code 1 stderr: Undefined symbols for architecture arm64: "_stricmp", referenced from: _main in conftest.o ld: symbol(s) not found for architecture arm64 clang: error: linker command failed with exit code 1 (use -v to see invocation) Linker output before filtering: Undefined symbols for architecture arm64: "_stricmp", referenced from: _main in conftest.o ld: symbol(s) not found for architecture arm64 clang: error: linker command failed with exit code 1 (use -v to see invocation) : Linker output after filtering: Undefined symbols for architecture arm64: "_stricmp", referenced from: _main in conftest.o ld: symbol(s) not found for architecture arm64 clang: error: linker command failed with exit code 1 (use -v to see invocation): Checking for functions [memalign] ===== Checking linker Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char memalign(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_memalign) || defined (__stub___memalign) memalign_will_always_fail_with_ENOSYS(); #else memalign(); #endif ; return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.o -ldl Possible ERROR while running linker: exit code 1 stderr: Undefined symbols for architecture arm64: "_memalign", referenced from: _main in conftest.o ld: symbol(s) not found for architecture arm64 clang: error: linker command failed with exit code 1 (use -v to see invocation) Linker output before filtering: Undefined symbols for architecture arm64: "_memalign", referenced from: _main in conftest.o ld: symbol(s) not found for architecture arm64 clang: error: linker command failed with exit code 1 (use -v to see invocation) : Linker output after filtering: Undefined symbols for architecture arm64: "_memalign", referenced from: _main in conftest.o ld: symbol(s) not found for architecture arm64 clang: error: linker command failed with exit code 1 (use -v to see invocation): Checking for functions [_pipe] ===== Checking linker Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _pipe(); #ifdef __cplusplus } #endif int main() { #if defined (__stub__pipe) || defined (__stub____pipe) _pipe_will_always_fail_with_ENOSYS(); #else _pipe(); #endif ; return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.o -ldl Possible ERROR while running linker: exit code 1 stderr: Undefined symbols for architecture arm64: "__pipe", referenced from: _main in conftest.o ld: symbol(s) not found for architecture arm64 clang: error: linker command failed with exit code 1 (use -v to see invocation) Linker output before filtering: Undefined symbols for architecture arm64: "__pipe", referenced from: _main in conftest.o ld: symbol(s) not found for architecture arm64 clang: error: linker command failed with exit code 1 (use -v to see invocation) : Linker output after filtering: Undefined symbols for architecture arm64: "__pipe", referenced from: _main in conftest.o ld: symbol(s) not found for architecture arm64 clang: error: linker command failed with exit code 1 (use -v to see invocation): Checking for functions [sleep] ===== Checking linker Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char sleep(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_sleep) || defined (__stub___sleep) sleep_will_always_fail_with_ENOSYS(); #else sleep(); #endif ; return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.o -ldl Defined "HAVE_SLEEP" to "1" Checking for functions [sbreak] ===== Checking linker Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char sbreak(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_sbreak) || defined (__stub___sbreak) sbreak_will_always_fail_with_ENOSYS(); #else sbreak(); #endif ; return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.o -ldl Possible ERROR while running linker: exit code 1 stderr: Undefined symbols for architecture arm64: "_sbreak", referenced from: _main in conftest.o ld: symbol(s) not found for architecture arm64 clang: error: linker command failed with exit code 1 (use -v to see invocation) Linker output before filtering: Undefined symbols for architecture arm64: "_sbreak", referenced from: _main in conftest.o ld: symbol(s) not found for architecture arm64 clang: error: linker command failed with exit code 1 (use -v to see invocation) : Linker output after filtering: Undefined symbols for architecture arm64: "_sbreak", referenced from: _main in conftest.o ld: symbol(s) not found for architecture arm64 clang: error: linker command failed with exit code 1 (use -v to see invocation): Checking for functions [_lseek] ===== Checking linker Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _lseek(); #ifdef __cplusplus } #endif int main() { #if defined (__stub__lseek) || defined (__stub____lseek) _lseek_will_always_fail_with_ENOSYS(); #else _lseek(); #endif ; return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.o -ldl Possible ERROR while running linker: exit code 1 stderr: Undefined symbols for architecture arm64: "__lseek", referenced from: _main in conftest.o ld: symbol(s) not found for architecture arm64 clang: error: linker command failed with exit code 1 (use -v to see invocation) Linker output before filtering: Undefined symbols for architecture arm64: "__lseek", referenced from: _main in conftest.o ld: symbol(s) not found for architecture arm64 clang: error: linker command failed with exit code 1 (use -v to see invocation) : Linker output after filtering: Undefined symbols for architecture arm64: "__lseek", referenced from: _main in conftest.o ld: symbol(s) not found for architecture arm64 clang: error: linker command failed with exit code 1 (use -v to see invocation): Checking for functions [fpresetsticky] ===== Checking linker Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char fpresetsticky(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_fpresetsticky) || defined (__stub___fpresetsticky) fpresetsticky_will_always_fail_with_ENOSYS(); #else fpresetsticky(); #endif ; return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.o -ldl Possible ERROR while running linker: exit code 1 stderr: Undefined symbols for architecture arm64: "_fpresetsticky", referenced from: _main in conftest.o ld: symbol(s) not found for architecture arm64 clang: error: linker command failed with exit code 1 (use -v to see invocation) Linker output before filtering: Undefined symbols for architecture arm64: "_fpresetsticky", referenced from: _main in conftest.o ld: symbol(s) not found for architecture arm64 clang: error: linker command failed with exit code 1 (use -v to see invocation) : Linker output after filtering: Undefined symbols for architecture arm64: "_fpresetsticky", referenced from: _main in conftest.o ld: symbol(s) not found for architecture arm64 clang: error: linker command failed with exit code 1 (use -v to see invocation): Checking for functions [_getcwd] ===== Checking linker Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _getcwd(); #ifdef __cplusplus } #endif int main() { #if defined (__stub__getcwd) || defined (__stub____getcwd) _getcwd_will_always_fail_with_ENOSYS(); #else _getcwd(); #endif ; return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.o -ldl Possible ERROR while running linker: exit code 1 stderr: Undefined symbols for architecture arm64: "__getcwd", referenced from: _main in conftest.o ld: symbol(s) not found for architecture arm64 clang: error: linker command failed with exit code 1 (use -v to see invocation) Linker output before filtering: Undefined symbols for architecture arm64: "__getcwd", referenced from: _main in conftest.o ld: symbol(s) not found for architecture arm64 clang: error: linker command failed with exit code 1 (use -v to see invocation) : Linker output after filtering: Undefined symbols for architecture arm64: "__getcwd", referenced from: _main in conftest.o ld: symbol(s) not found for architecture arm64 clang: error: linker command failed with exit code 1 (use -v to see invocation): Checking for functions [fpsetsticky] ===== Checking linker Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char fpsetsticky(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_fpsetsticky) || defined (__stub___fpsetsticky) fpsetsticky_will_always_fail_with_ENOSYS(); #else fpsetsticky(); #endif ; return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.o -ldl Possible ERROR while running linker: exit code 1 stderr: Undefined symbols for architecture arm64: "_fpsetsticky", referenced from: _main in conftest.o ld: symbol(s) not found for architecture arm64 clang: error: linker command failed with exit code 1 (use -v to see invocation) Linker output before filtering: Undefined symbols for architecture arm64: "_fpsetsticky", referenced from: _main in conftest.o ld: symbol(s) not found for architecture arm64 clang: error: linker command failed with exit code 1 (use -v to see invocation) : Linker output after filtering: Undefined symbols for architecture arm64: "_fpsetsticky", referenced from: _main in conftest.o ld: symbol(s) not found for architecture arm64 clang: error: linker command failed with exit code 1 (use -v to see invocation): Checking for functions [_sleep] ===== Checking linker Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _sleep(); #ifdef __cplusplus } #endif int main() { #if defined (__stub__sleep) || defined (__stub____sleep) _sleep_will_always_fail_with_ENOSYS(); #else _sleep(); #endif ; return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.o -ldl Possible ERROR while running linker: exit code 1 stderr: Undefined symbols for architecture arm64: "__sleep", referenced from: _main in conftest.o ld: symbol(s) not found for architecture arm64 clang: error: linker command failed with exit code 1 (use -v to see invocation) Linker output before filtering: Undefined symbols for architecture arm64: "__sleep", referenced from: _main in conftest.o ld: symbol(s) not found for architecture arm64 clang: error: linker command failed with exit code 1 (use -v to see invocation) : Linker output after filtering: Undefined symbols for architecture arm64: "__sleep", referenced from: _main in conftest.o ld: symbol(s) not found for architecture arm64 clang: error: linker command failed with exit code 1 (use -v to see invocation): Checking for functions [snprintf] ===== Checking linker Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.c Possible ERROR while running compiler: stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.c:13:6: warning: incompatible redeclaration of library function 'snprintf' [-Wincompatible-library-redeclaration] char snprintf(); ^ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.c:13:6: note: 'snprintf' is a builtin with type 'int (char *, unsigned long, const char *, ...)' 1 warning generated. Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char snprintf(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_snprintf) || defined (__stub___snprintf) snprintf_will_always_fail_with_ENOSYS(); #else snprintf(); #endif ; return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.o -ldl Defined "HAVE_SNPRINTF" to "1" ============================================================================================= TESTING: checkMmap from config.functions(config/BuildSystem/config/functions.py:179) Check for functional mmap() to allocate shared memory and define HAVE_MMAP ===== Checking linker Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #include #include int main() { int fd; fd=open("/tmp/file",O_RDWR); mmap((void*)0,100,PROT_READ|PROT_WRITE,MAP_SHARED,fd,0); ; return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions/conftest.o -ldl Defined "HAVE_MMAP" to "1" child config.functions took 1.947325 seconds ============================================================================================= TESTING: configureMemorySize from config.utilities.getResidentSetSize(config/BuildSystem/config/utilities/getResidentSetSize.py:31) Try to determine how to measure the memory usage ===== Checking linker Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize/conftest.c Possible ERROR while running compiler: exit code 1 stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize/conftest.c:38:18: error: implicit declaration of function 'getpagesize' is invalid in C99 [-Werror,-Wimplicit-function-declaration] f2 = getpagesize() * ((double)(temp2.ru_maxrss-temp1.ru_maxrss))/(4.0*ARRAYSIZE); ^ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize/conftest.c:59:1: error: expected '}' ^ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize/conftest.c:12:12: note: to match this '{' int main() { ^ 2 errors generated. Source: #include "confdefs.h" #include "conffix.h" #include #include #include #include #include #include #include int main() { #define ARRAYSIZE 10000000 int i,*m; struct rusage temp1,temp2; double f0,f1,f2; if (getrusage(RUSAGE_SELF,&temp1)) { printf("Error calling getrusage()\n"); return -1; } m = malloc(ARRAYSIZE*sizeof(int)); if (!m) { printf("Error calling malloc()\n"); return -3; } for (i=0; i .90 && f0 < 1.1) { printf("uses bytes in getrusage()\n"); return 1; if (f1 > .90 && f1 < 1.1) { printf("uses 1024 size chunks in getrusage()\n"); return 2; } else if (f2 > .9 && f2 < 1.1) { printf("uses getpagesize() chunks in getrusage()\n"); return 3; } printf("unable to determine if uses bytes, 1024 or getpagesize() chunks in getrusage()\n"); return -2;; return 0; } Compile failed inside link output from getrusage() child config.utilities.getResidentSetSize took 0.034404 seconds ============================================================================================= TESTING: configureFortranCommandLine from config.utilities.fortranCommandLine(config/BuildSystem/config/utilities/fortranCommandLine.py:27) Check for the mechanism to retrieve command line arguments in Fortran Checking for functions [] in library [''] [] ===== Checking linker Executing: gfortran -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -fPIC -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.F90 Successful compile: Source: program main integer i character*(80) arg i = command_argument_count() call get_command_argument(i,arg) end Executing: gfortran -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.o -ldl Defined "HAVE_FORTRAN_GET_COMMAND_ARGUMENT" to "1" child config.utilities.fortranCommandLine took 0.068049 seconds ============================================================================================= TESTING: configureFPTrap from config.utilities.FPTrap(config/BuildSystem/config/utilities/FPTrap.py:27) Checking the handling of floating point traps Checking for header: sigfpe.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 1 stdout: # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" # 1 "" 1 # 1 "" 3 # 384 "" 3 # 1 "" 1 # 1 "" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/confdefs.h" 1 # 2 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conffix.h" 1 # 3 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" 2 stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:3:10: fatal error: 'sigfpe.h' file not found #include ^~~~~~~~~~ 1 error generated. Source: #include "confdefs.h" #include "conffix.h" #include Preprocess output before filtering: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:3:10: fatal error: 'sigfpe.h' file not found #include ^~~~~~~~~~ 1 error generated. : Preprocess output after filtering: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:3:10: fatal error: 'sigfpe.h' file not found #include ^~~~~~~~~~ 1 error generated.: Checking for header: fpxcp.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 1 stdout: # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" # 1 "" 1 # 1 "" 3 # 384 "" 3 # 1 "" 1 # 1 "" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/confdefs.h" 1 # 2 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conffix.h" 1 # 3 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" 2 stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:3:10: fatal error: 'fpxcp.h' file not found #include ^~~~~~~~~ 1 error generated. Source: #include "confdefs.h" #include "conffix.h" #include Preprocess output before filtering: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:3:10: fatal error: 'fpxcp.h' file not found #include ^~~~~~~~~ 1 error generated. : Preprocess output after filtering: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:3:10: fatal error: 'fpxcp.h' file not found #include ^~~~~~~~~ 1 error generated.: Checking for header: floatingpoint.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 1 stdout: # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" # 1 "" 1 # 1 "" 3 # 384 "" 3 # 1 "" 1 # 1 "" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/confdefs.h" 1 # 2 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conffix.h" 1 # 3 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c" 2 stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:3:10: fatal error: 'floatingpoint.h' file not found #include ^~~~~~~~~~~~~~~~~ 1 error generated. Source: #include "confdefs.h" #include "conffix.h" #include Preprocess output before filtering: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:3:10: fatal error: 'floatingpoint.h' file not found #include ^~~~~~~~~~~~~~~~~ 1 error generated. : Preprocess output after filtering: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c:3:10: fatal error: 'floatingpoint.h' file not found #include ^~~~~~~~~~~~~~~~~ 1 error generated.: child config.utilities.FPTrap took 0.067506 seconds ============================================================================================= TESTING: configureFeatureTestMacros from config.utilities.featureTestMacros(config/BuildSystem/config/utilities/featureTestMacros.py:13) Checks if certain feature test macros are support ===== Checking compiler Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros/conftest.c Possible ERROR while running compiler: exit code 1 stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros/conftest.c:4:10: fatal error: 'sysctl.h' file not found #include ^~~~~~~~~~ 1 error generated. Source: #include "confdefs.h" #include "conffix.h" #define _POSIX_C_SOURCE 200112L #include int main() { ; return 0; } ===== Checking compiler Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #define _BSD_SOURCE #include int main() { ; return 0; } Defined "_BSD_SOURCE" to "1" ===== Checking compiler Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #define _DEFAULT_SOURCE #include int main() { ; return 0; } Defined "_DEFAULT_SOURCE" to "1" ===== Checking compiler Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros/conftest.c Possible ERROR while running compiler: exit code 1 stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros/conftest.c:7:1: error: use of undeclared identifier 'cpu_set_t' cpu_set_t mset; ^ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros/conftest.c:8:1: error: implicit declaration of function 'CPU_ZERO' is invalid in C99 [-Werror,-Wimplicit-function-declaration] CPU_ZERO(&mset);; ^ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros/conftest.c:8:11: error: use of undeclared identifier 'mset' CPU_ZERO(&mset);; ^ 3 errors generated. Source: #include "confdefs.h" #include "conffix.h" #define _GNU_SOURCE #include int main() { cpu_set_t mset; CPU_ZERO(&mset);; return 0; } ===== Checking compiler Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #define _GNU_SOURCE #include #include int main() { Dl_info info; if (dladdr(exit, &info)) return 0;; return 0; } Defined "_GNU_SOURCE" to "1" child config.utilities.featureTestMacros took 0.142725 seconds ============================================================================================= TESTING: configureMissingUtypeTypedefs from config.utilities.missing(config/BuildSystem/config/utilities/missing.py:55) Checks if u_short is undefined ===== Checking compiler Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.c Possible ERROR while running compiler: stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.c:6:9: warning: unused variable 'foo' [-Wunused-variable] u_short foo; ^ 1 warning generated. Source: #include "confdefs.h" #include "conffix.h" #include int main() { u_short foo; ; return 0; } ============================================================================================= TESTING: configureMissingFunctions from config.utilities.missing(config/BuildSystem/config/utilities/missing.py:61) Checks for SOCKETS and getline ===== Checking linker Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include char *lineptr; size_t n; FILE *stream; int main() { getline(&lineptr, &n, stream); ; return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.o -ldl ============================================================================================= TESTING: configureMissingSignals from config.utilities.missing(config/BuildSystem/config/utilities/missing.py:81) Check for missing signals, and define MISSING_ if necessary ===== Checking compiler Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.c Possible ERROR while running compiler: stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.c:8:7: warning: if statement has empty body [-Wempty-body] if (i); ^ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.c:8:7: note: put the semicolon on a separate line to silence this warning 1 warning generated. Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGABRT; if (i); ; return 0; } ===== Checking compiler Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.c Possible ERROR while running compiler: stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.c:8:7: warning: if statement has empty body [-Wempty-body] if (i); ^ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.c:8:7: note: put the semicolon on a separate line to silence this warning 1 warning generated. Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGALRM; if (i); ; return 0; } ===== Checking compiler Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.c Possible ERROR while running compiler: stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.c:8:7: warning: if statement has empty body [-Wempty-body] if (i); ^ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.c:8:7: note: put the semicolon on a separate line to silence this warning 1 warning generated. Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGBUS; if (i); ; return 0; } ===== Checking compiler Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.c Possible ERROR while running compiler: stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.c:8:7: warning: if statement has empty body [-Wempty-body] if (i); ^ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.c:8:7: note: put the semicolon on a separate line to silence this warning 1 warning generated. Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGCHLD; if (i); ; return 0; } ===== Checking compiler Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.c Possible ERROR while running compiler: stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.c:8:7: warning: if statement has empty body [-Wempty-body] if (i); ^ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.c:8:7: note: put the semicolon on a separate line to silence this warning 1 warning generated. Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGCONT; if (i); ; return 0; } ===== Checking compiler Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.c Possible ERROR while running compiler: stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.c:8:7: warning: if statement has empty body [-Wempty-body] if (i); ^ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.c:8:7: note: put the semicolon on a separate line to silence this warning 1 warning generated. Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGFPE; if (i); ; return 0; } ===== Checking compiler Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.c Possible ERROR while running compiler: stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.c:8:7: warning: if statement has empty body [-Wempty-body] if (i); ^ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.c:8:7: note: put the semicolon on a separate line to silence this warning 1 warning generated. Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGHUP; if (i); ; return 0; } ===== Checking compiler Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.c Possible ERROR while running compiler: stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.c:8:7: warning: if statement has empty body [-Wempty-body] if (i); ^ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.c:8:7: note: put the semicolon on a separate line to silence this warning 1 warning generated. Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGILL; if (i); ; return 0; } ===== Checking compiler Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.c Possible ERROR while running compiler: stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.c:8:7: warning: if statement has empty body [-Wempty-body] if (i); ^ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.c:8:7: note: put the semicolon on a separate line to silence this warning 1 warning generated. Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGINT; if (i); ; return 0; } ===== Checking compiler Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.c Possible ERROR while running compiler: stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.c:8:7: warning: if statement has empty body [-Wempty-body] if (i); ^ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.c:8:7: note: put the semicolon on a separate line to silence this warning 1 warning generated. Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGKILL; if (i); ; return 0; } ===== Checking compiler Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.c Possible ERROR while running compiler: stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.c:8:7: warning: if statement has empty body [-Wempty-body] if (i); ^ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.c:8:7: note: put the semicolon on a separate line to silence this warning 1 warning generated. Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGPIPE; if (i); ; return 0; } ===== Checking compiler Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.c Possible ERROR while running compiler: stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.c:8:7: warning: if statement has empty body [-Wempty-body] if (i); ^ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.c:8:7: note: put the semicolon on a separate line to silence this warning 1 warning generated. Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGQUIT; if (i); ; return 0; } ===== Checking compiler Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.c Possible ERROR while running compiler: stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.c:8:7: warning: if statement has empty body [-Wempty-body] if (i); ^ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.c:8:7: note: put the semicolon on a separate line to silence this warning 1 warning generated. Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGSEGV; if (i); ; return 0; } ===== Checking compiler Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.c Possible ERROR while running compiler: stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.c:8:7: warning: if statement has empty body [-Wempty-body] if (i); ^ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.c:8:7: note: put the semicolon on a separate line to silence this warning 1 warning generated. Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGSTOP; if (i); ; return 0; } ===== Checking compiler Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.c Possible ERROR while running compiler: stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.c:8:7: warning: if statement has empty body [-Wempty-body] if (i); ^ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.c:8:7: note: put the semicolon on a separate line to silence this warning 1 warning generated. Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGSYS; if (i); ; return 0; } ===== Checking compiler Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.c Possible ERROR while running compiler: stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.c:8:7: warning: if statement has empty body [-Wempty-body] if (i); ^ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.c:8:7: note: put the semicolon on a separate line to silence this warning 1 warning generated. Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGTERM; if (i); ; return 0; } ===== Checking compiler Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.c Possible ERROR while running compiler: stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.c:8:7: warning: if statement has empty body [-Wempty-body] if (i); ^ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.c:8:7: note: put the semicolon on a separate line to silence this warning 1 warning generated. Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGTRAP; if (i); ; return 0; } ===== Checking compiler Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.c Possible ERROR while running compiler: stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.c:8:7: warning: if statement has empty body [-Wempty-body] if (i); ^ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.c:8:7: note: put the semicolon on a separate line to silence this warning 1 warning generated. Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGTSTP; if (i); ; return 0; } ===== Checking compiler Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.c Possible ERROR while running compiler: stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.c:8:7: warning: if statement has empty body [-Wempty-body] if (i); ^ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.c:8:7: note: put the semicolon on a separate line to silence this warning 1 warning generated. Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGURG; if (i); ; return 0; } ===== Checking compiler Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.c Possible ERROR while running compiler: stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.c:8:7: warning: if statement has empty body [-Wempty-body] if (i); ^ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.c:8:7: note: put the semicolon on a separate line to silence this warning 1 warning generated. Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGUSR1; if (i); ; return 0; } ===== Checking compiler Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.c Possible ERROR while running compiler: stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.c:8:7: warning: if statement has empty body [-Wempty-body] if (i); ^ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.c:8:7: note: put the semicolon on a separate line to silence this warning 1 warning generated. Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGUSR2; if (i); ; return 0; } ============================================================================================= TESTING: configureMissingGetdomainnamePrototype from config.utilities.missing(config/BuildSystem/config/utilities/missing.py:98) ===== Checking compiler Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.c Possible ERROR while running compiler: stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.c:25:7: warning: incompatible function pointer types initializing 'int (*)(char *, size_t)' (aka 'int (*)(char *, unsigned long)') with an expression of type 'int (char *, int)' [-Wincompatible-function-pointer-types] int (*getdomainname_ptr)(char*,size_t) = getdomainname; ^ ~~~~~~~~~~~~~ 1 warning generated. Source: #include "confdefs.h" #include "conffix.h" #if !defined(_BSD_SOURCE) #define _BSD_SOURCE #endif #if !defined(_DEFAULT_SOURCE) #define _DEFAULT_SOURCE #endif #if !defined(_GNU_SOURCE) #define _GNU_SOURCE #endif #ifdef PETSC_HAVE_UNISTD_H #include #endif #ifdef PETSC_HAVE_NETDB_H #include #endif int main() { int (*getdomainname_ptr)(char*,size_t) = getdomainname; char test[10]; if (getdomainname_ptr(test,10)) return 1; ; return 0; } ============================================================================================= TESTING: configureMissingSrandPrototype from config.utilities.missing(config/BuildSystem/config/utilities/missing.py:123) ===== Checking compiler Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #if !defined(_BSD_SOURCE) #define _BSD_SOURCE #endif #if !defined(_DEFAULT_SOURCE) #define _DEFAULT_SOURCE #endif #if !defined(_GNU_SOURCE) #define _GNU_SOURCE #endif #include int main() { double (*drand48_ptr)(void) = drand48; void (*srand48_ptr)(long int) = srand48; long int seed=10; srand48_ptr(seed); if (drand48_ptr() > 0.5) return 1; ; return 0; } child config.utilities.missing took 0.755511 seconds ============================================================================================= TESTING: checkSharedDynamicPicOptions from PETSc.options.sharedLibraries(config/PETSc/options/sharedLibraries.py:34) ============================================================================================= TESTING: configureSharedLibraries from PETSc.options.sharedLibraries(config/PETSc/options/sharedLibraries.py:49) Checks whether shared libraries should be used, for which you must - Specify --with-shared-libraries - Have found a working shared linker Defines PETSC_USE_SHARED_LIBRARIES if they are used Executing: uname -s stdout: Darwin Detected Darwin/MacOSX OS Defined make rule "shared_arch" with dependencies "shared_darwin" and code [] Defined make macro "SONAME_FUNCTION" to "$(1).$(2).dylib" Defined make macro "SL_LINKER_FUNCTION" to "-dynamiclib -install_name $(call SONAME_FUNCTION,$(1),$(2)) -compatibility_version $(2) -current_version $(3) -single_module -multiply_defined suppress -undefined dynamic_lookup" Defined make macro "BUILDSHAREDLIB" to "yes" Defined "USE_SHARED_LIBRARIES" to "1" ============================================================================================= TESTING: configureDynamicLibraries from PETSc.options.sharedLibraries(config/PETSc/options/sharedLibraries.py:93) Checks whether dynamic loading is available (with dlfcn.h and libdl) Defined "HAVE_DYNAMIC_LIBRARIES" to "1" ============================================================================================= TESTING: configureSerializedFunctions from PETSc.options.sharedLibraries(config/PETSc/options/sharedLibraries.py:99) Defines PETSC_SERIALIZE_FUNCTIONS if they are used Requires shared libraries ============================================================================================= TESTING: checkSymbolResolution from PETSc.options.sharedLibraries(config/PETSc/options/sharedLibraries.py:108) Checks that dladdr() works ===== Checking compiler Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #define _GNU_SOURCE #include #include int main() { Dl_info info; if (dladdr(exit, &info)) return 0; ; return 0; } Defined "HAVE_DLADDR" to "1" Checking for header: cxxabi.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Preprocess output before filtering: : Preprocess output after filtering: : Defined "HAVE_CXXABI_H" to "1" child PETSc.options.sharedLibraries took 0.061631 seconds ============================================================================================= TESTING: configureScalarType from PETSc.options.scalarTypes(config/PETSc/options/scalarTypes.py:39) Choose between real and complex numbers Scalar type is real ===== Checking linker Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes/conftest.c Possible ERROR while running compiler: stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes/conftest.c:6:21: warning: unused variable 'a' [-Wunused-variable] double b = 2.0; int a = isnormal(b); ^ 1 warning generated. Source: #include "confdefs.h" #include "conffix.h" #include int main() { double b = 2.0; int a = isnormal(b); ; return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes/conftest.o -ldl Defined "HAVE_ISNORMAL" to "1" ===== Checking linker Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes/conftest.c Possible ERROR while running compiler: stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes/conftest.c:6:21: warning: unused variable 'a' [-Wunused-variable] double b = 2.0; int a = isnan(b); ^ 1 warning generated. Source: #include "confdefs.h" #include "conffix.h" #include int main() { double b = 2.0; int a = isnan(b); ; return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes/conftest.o -ldl Defined "HAVE_ISNAN" to "1" ===== Checking linker Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes/conftest.c Possible ERROR while running compiler: stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes/conftest.c:6:21: warning: unused variable 'a' [-Wunused-variable] double b = 2.0; int a = isinf(b); ^ 1 warning generated. Source: #include "confdefs.h" #include "conffix.h" #include int main() { double b = 2.0; int a = isinf(b); ; return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes/conftest.o -ldl Defined "HAVE_ISINF" to "1" ============================================================================================= TESTING: configurePrecision from PETSc.options.scalarTypes(config/PETSc/options/scalarTypes.py:80) Set the default real number precision for PETSc objects Checking C compiler works with __float128 Checking for functions [logq] in library ['quadmath'] [] ===== Checking linker Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.c Possible ERROR while running compiler: exit code 1 stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.c:4:10: fatal error: 'quadmath.h' file not found #include ^~~~~~~~~~~~ 1 error generated. Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_logq() { __float128 f; logq(f);; } int main() { _check_logq();; return 0; } Compile failed inside link Defined "USE_REAL_DOUBLE" to "1" Defined make macro "PETSC_SCALAR_SIZE" to "64" Precision is double child PETSc.options.scalarTypes took 0.225668 seconds ============================================================================================= TESTING: configureMkdir from config.programs(config/BuildSystem/config/programs.py:22) Make sure we can have mkdir automatically make intermediate directories Checking for program /opt/homebrew/Cellar/pyenv-virtualenv/1.1.5/shims/mkdir...not found Checking for program /usr/local/share/python/mkdir...not found Checking for program /opt/homebrew/bin/mkdir...not found Checking for program /usr/local/bin/mkdir...not found Checking for program /usr/bin/mkdir...not found Checking for program /bin/mkdir...found Executing: /bin/mkdir -p .conftest/tmp Adding -p flag to /bin/mkdir -p to automatically create directories Defined make macro "MKDIR" to "/bin/mkdir -p" ============================================================================================= TESTING: configureAutoreconf from config.programs(config/BuildSystem/config/programs.py:44) Check for autoreconf Checking for program /opt/homebrew/Cellar/pyenv-virtualenv/1.1.5/shims/autoreconf...not found Checking for program /usr/local/share/python/autoreconf...not found Checking for program /opt/homebrew/bin/autoreconf...found Executing: ['/opt/homebrew/bin/autoreconf'] autoreconf test error: Could not execute "[['/opt/homebrew/bin/autoreconf']]": Can't exec "aclocal": No such file or directory at /opt/homebrew/Cellar/autoconf/2.71/share/autoconf/Autom4te/FileUtils.pm line 274. autoreconf: error: aclocal failed with exit status: 2 Checking for program /opt/homebrew/Cellar/pyenv-virtualenv/1.1.5/shims/libtoolize...not found Checking for program /usr/local/share/python/libtoolize...not found Checking for program /opt/homebrew/bin/libtoolize...not found Checking for program /usr/local/bin/libtoolize...not found Checking for program /usr/bin/libtoolize...not found Checking for program /bin/libtoolize...not found Checking for program /usr/sbin/libtoolize...not found Checking for program /sbin/libtoolize...not found Checking for program /Library/TeX/texbin/libtoolize...not found Checking for program /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/lib/petsc/bin/win32fe/libtoolize...not found Checking for program /opt/homebrew/Cellar/pyenv-virtualenv/1.1.5/shims/glibtoolize...not found Checking for program /usr/local/share/python/glibtoolize...not found Checking for program /opt/homebrew/bin/glibtoolize...not found Checking for program /usr/local/bin/glibtoolize...not found Checking for program /usr/bin/glibtoolize...not found Checking for program /bin/glibtoolize...not found Checking for program /usr/sbin/glibtoolize...not found Checking for program /sbin/glibtoolize...not found Checking for program /Library/TeX/texbin/glibtoolize...not found Checking for program /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/lib/petsc/bin/win32fe/glibtoolize...not found ============================================================================================= TESTING: configurePrograms from config.programs(config/BuildSystem/config/programs.py:71) Check for the programs needed to build and run PETSc Checking for program /opt/homebrew/Cellar/pyenv-virtualenv/1.1.5/shims/bash...not found Checking for program /usr/local/share/python/bash...not found Checking for program /opt/homebrew/bin/bash...not found Checking for program /usr/local/bin/bash...not found Checking for program /usr/bin/bash...not found Checking for program /bin/bash...found Defined make macro "SHELL" to "/bin/bash" Checking for program /opt/homebrew/Cellar/pyenv-virtualenv/1.1.5/shims/sed...not found Checking for program /usr/local/share/python/sed...not found Checking for program /opt/homebrew/bin/sed...not found Checking for program /usr/local/bin/sed...not found Checking for program /usr/bin/sed...found Defined make macro "SED" to "/usr/bin/sed" Executing: /usr/bin/sed -i s/sed/sd/g "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.programs/sed1" Rejected SEDINPLACE cmd: /usr/bin/sed -i Executing: /usr/bin/sed -i "" s/sed/sd/g "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.programs/sed1" Adding SEDINPLACE cmd: /usr/bin/sed -i "" Defined make macro "SEDINPLACE" to "/usr/bin/sed -i """ Checking for program /opt/homebrew/Cellar/pyenv-virtualenv/1.1.5/shims/mv...not found Checking for program /usr/local/share/python/mv...not found Checking for program /opt/homebrew/bin/mv...not found Checking for program /usr/local/bin/mv...not found Checking for program /usr/bin/mv...not found Checking for program /bin/mv...found Defined make macro "MV" to "/bin/mv" Checking for program /opt/homebrew/Cellar/pyenv-virtualenv/1.1.5/shims/cp...not found Checking for program /usr/local/share/python/cp...not found Checking for program /opt/homebrew/bin/cp...not found Checking for program /usr/local/bin/cp...not found Checking for program /usr/bin/cp...not found Checking for program /bin/cp...found Defined make macro "CP" to "/bin/cp" Checking for program /opt/homebrew/Cellar/pyenv-virtualenv/1.1.5/shims/grep...not found Checking for program /usr/local/share/python/grep...not found Checking for program /opt/homebrew/bin/grep...not found Checking for program /usr/local/bin/grep...not found Checking for program /usr/bin/grep...found Defined make macro "GREP" to "/usr/bin/grep" Checking for program /opt/homebrew/Cellar/pyenv-virtualenv/1.1.5/shims/rm...not found Checking for program /usr/local/share/python/rm...not found Checking for program /opt/homebrew/bin/rm...not found Checking for program /usr/local/bin/rm...not found Checking for program /usr/bin/rm...not found Checking for program /bin/rm...found Defined make macro "RM" to "/bin/rm -f" Checking for program /opt/homebrew/Cellar/pyenv-virtualenv/1.1.5/shims/diff...not found Checking for program /usr/local/share/python/diff...not found Checking for program /opt/homebrew/bin/diff...not found Checking for program /usr/local/bin/diff...not found Checking for program /usr/bin/diff...found Executing: "/usr/bin/diff" -w "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.programs/diff1" "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.programs/diff2" Defined make macro "DIFF" to "/usr/bin/diff -w" Checking for program /usr/ucb/ps...not found Checking for program /usr/usb/ps...not found Checking for program /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/lib/petsc/bin/win32fe/ps...not found Unable to find programs: ['ps'] in listing of the specific search path: ['/usr/ucb', '/usr/usb'] Warning accessing /usr/ucb gives errors: [Errno 2] No such file or directory: '/usr/ucb' Warning accessing /usr/usb gives errors: [Errno 2] No such file or directory: '/usr/usb' Defined make macro "PYTHON" to "/opt/homebrew/opt/python@3.9/bin/python3.9" Checking for program /opt/homebrew/Cellar/pyenv-virtualenv/1.1.5/shims/m4...not found Checking for program /usr/local/share/python/m4...not found Checking for program /opt/homebrew/bin/m4...not found Checking for program /usr/local/bin/m4...not found Checking for program /usr/bin/m4...found Defined make macro "M4" to "/usr/bin/m4" child config.programs took 1.103723 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.make(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.make(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default ============================================================================================= TESTING: configureMake from config.packages.make(config/BuildSystem/config/packages/make.py:96) Check Guesses for GNU make Executing: gmake --version GNUMake check failed: Could not execute "['gmake --version']": /bin/sh: gmake: command not found Executing: make --version stdout: GNU Make 3.81 Copyright (C) 2006 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. This program built for i386-apple-darwin11.3.0 Checking for program /opt/homebrew/Cellar/pyenv-virtualenv/1.1.5/shims/make...not found Checking for program /usr/local/share/python/make...not found Checking for program /opt/homebrew/bin/make...not found Checking for program /usr/local/bin/make...not found Checking for program /usr/bin/make...found Defined make macro "MAKE" to "/usr/bin/make" Checking for program /opt/homebrew/Cellar/pyenv-virtualenv/1.1.5/shims/make...not found Checking for program /usr/local/share/python/make...not found Checking for program /opt/homebrew/bin/make...not found Checking for program /usr/local/bin/make...not found Checking for program /usr/bin/make...found Defined make macro "MAKE_USER" to "make" ============================================================================================= ***** WARNING: You have a version of GNU make older than 4.0. It will work, but may not support all the parallel testing options. You can install the latest GNU make with your package manager, such as brew or macports, or use the --download-make option to get the latest GNU make ***** ============================================================================================= ============================================================================================= TESTING: setupGNUMake from config.packages.make(config/BuildSystem/config/packages/make.py:150) Setup other GNU make stuff Defined make rule "libc" with dependencies "${LIBNAME}(${OBJSC})" and code [] Defined make rule "libcxx" with dependencies "${LIBNAME}(${OBJSCXX})" and code [] Defined make rule "libcu" with dependencies "${LIBNAME}(${OBJSCU})" and code [] Defined make rule "libf" with dependencies "${OBJSF}" and code -${AR} ${AR_FLAGS} ${LIBNAME} ${OBJSF} Defined make macro "OMAKE_PRINTDIR " to "/usr/bin/make --print-directory" Defined make macro "OMAKE" to "/usr/bin/make --no-print-directory" Defined make macro "MAKE_PAR_OUT_FLG" to "" ============================================================================================= TESTING: configureMakeNP from config.packages.make(config/BuildSystem/config/packages/make.py:197) check no of cores on the build machine [perhaps to do make '-j ncores'] module multiprocessing found 8 cores: using make_np = 7 Defined make macro "MAKE_NP" to "7" Defined make macro "MAKE_TEST_NP" to "4" Defined make macro "MAKE_LOAD" to "12.0" Defined make macro "NPMAX" to "8" child config.packages.make took 0.023433 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.sycl(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.sycl(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.sycl took 0.000417 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.hip(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.hip(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.hip took 0.000365 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.X(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: checkDependencies from config.packages.X(config/BuildSystem/config/package.py:912) ============================================================================================= TESTING: configureLibrary from config.packages.X(config/BuildSystem/config/package.py:937) Find an installation and check if it can work with PETSc ================================================================================== Checking for a functional X Checking for library in Compiler specific search X: [] ============================================================================================= TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:167) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [XSetWMName] in library [] [] ===== Checking linker Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char XSetWMName(); static void _check_XSetWMName() { XSetWMName(); } int main() { _check_XSetWMName();; return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.o -ldl Possible ERROR while running linker: exit code 1 stderr: Undefined symbols for architecture arm64: "_XSetWMName", referenced from: __check_XSetWMName in conftest.o ld: symbol(s) not found for architecture arm64 clang: error: linker command failed with exit code 1 (use -v to see invocation) Linker output before filtering: Undefined symbols for architecture arm64: "_XSetWMName", referenced from: __check_XSetWMName in conftest.o ld: symbol(s) not found for architecture arm64 clang: error: linker command failed with exit code 1 (use -v to see invocation) : Linker output after filtering: Undefined symbols for architecture arm64: "_XSetWMName", referenced from: __check_XSetWMName in conftest.o ld: symbol(s) not found for architecture arm64 clang: error: linker command failed with exit code 1 (use -v to see invocation): Checking for library in Compiler specific search X: ['libX11.a'] ============================================================================================= TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:167) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [XSetWMName] in library ['libX11.a'] [] ===== Checking linker Executing: gcc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char XSetWMName(); static void _check_XSetWMName() { XSetWMName(); } int main() { _check_XSetWMName();; return 0; } Executing: gcc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.o -lX11 -ldl Possible ERROR while running linker: exit code 1 stderr: ld: library not found for -lX11 clang: error: linker command failed with exit code 1 (use -v to see invocation) Linker output before filtering: ld: library not found for -lX11 clang: error: linker command failed with exit code 1 (use -v to see invocation) : Linker output after filtering: ld: library not found for -lX11 clang: error: linker command failed with exit code 1 (use -v to see invocation): X: SearchDir DirPath not found.. skipping: /opt/X11 X: SearchDir DirPath not found.. skipping: /Developer/SDKs/MacOSX10.5.sdk/usr/X11 X: SearchDir DirPath not found.. skipping: /Developer/SDKs/MacOSX10.4u.sdk/usr/X11R6 X: SearchDir DirPath not found.. skipping: /usr/X11 X: SearchDir DirPath not found.. skipping: /usr/X11R6 X: SearchDir DirPath not found.. skipping: /usr/X11R5 X: SearchDir DirPath not found.. skipping: /usr/X11R4 X: SearchDir DirPath not found.. skipping: /usr/local/X11 X: SearchDir DirPath not found.. skipping: /usr/local/X11R6 X: SearchDir DirPath not found.. skipping: /usr/local/X11R5 X: SearchDir DirPath not found.. skipping: /usr/local/X11R4 X: SearchDir DirPath not found.. skipping: /usr/X386 X: SearchDir DirPath not found.. skipping: /usr/x386 X: SearchDir DirPath not found.. skipping: /usr/XFree86/X11 Checking for library in Package specific search directory X: ['/usr/local/lib/libX11.a'] Contents of /usr/local: ['bin', 'include', 'sbin', 'etc', 'Homebrew', 'var', 'Caskroom', 'lib', 'opt', 'Frameworks', 'Cellar', 'texlive', 'share'] Contents /usr/local/lib: ['libpcre.1.dylib', 'pkgconfig', 'libpcreposix.0.dylib', 'libpcre.dylib', 'libpcre16.a', 'libpcrecpp.0.dylib', 'node_modules', 'libpcreposix.dylib', 'dtrace', 'python3.7', 'libpcre32.a', 'libpcre16.0.dylib', 'libpcre32.dylib', 'libpcre16.dylib', 'libpcreposix.a', 'libpcrecpp.dylib', 'zsh', 'libpcre32.0.dylib', 'libpcre.a', 'libpcrecpp.a', '.keepme'] ============================================================================================= TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:167) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [XSetWMName] in library ['/usr/local/lib/libX11.a'] [] Checking directory of requested libraries:/usr/local/lib for first library:libX11. Files in directory:['libpcre.1.dylib', 'pkgconfig', 'libpcreposix.0.dylib', 'libpcre.dylib', 'libpcre16.a', 'libpcrecpp.0.dylib', 'node_modules', 'libpcreposix.dylib', 'dtrace', 'python3.7', 'libpcre32.a', 'libpcre16.0.dylib', 'libpcre32.dylib', 'libpcre16.dylib', 'libpcreposix.a', 'libpcrecpp.dylib', 'zsh', 'libpcre32.0.dylib', 'libpcre.a', 'libpcrecpp.a', '.keepme'] X: DirPath not found.. skipping: /usr/local/lib64 X: SearchDir DirPath not found.. skipping: /usr/local/x11r5 X: SearchDir DirPath not found.. skipping: /usr/lpp/Xamples X: SearchDir DirPath not found.. skipping: /usr/openwin X: SearchDir DirPath not found.. skipping: /usr/openwin/share ============================================================================================= TESTING: checkVersion from config.packages.X(config/BuildSystem/config/package.py:1079) Uses self.version, self.minversion, self.maxversion, self.versionname, and self.versioninclude to determine if package has required version Preprocessing source: #include "confdefs.h" #include "conffix.h" #include "xorg/xorg-server.h" #include "xorg/xorgVersion.h" #define PetscXstr_(s) PetscStr_(s) #define PetscStr_(s) #s char *ver = "petscpkgver(" PetscXstr_(XORG_VERSION_MAJOR.XORG_VERSION_MINOR.XORG_VERSION_PATCH.XORG_VERSION_SNAP) ")"; Executing: gcc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.X /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.X/conftest.c Possible ERROR while running preprocessor: exit code 1 stdout: # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.X/conftest.c" # 1 "" 1 # 1 "" 3 # 384 "" 3 # 1 "" 1 # 1 "" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.X/conftest.c" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.X/confdefs.h" 1 # 2 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.X/conftest.c" 2 # 1 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.X/conffix.h" 1 # 3 "/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.X/conftest.c" 2 char *ver = "petscpkgver(" "XORG_VERSION_MAJOR.XORG_VERSION_MINOR.XORG_VERSION_PATCH.XORG_VERSION_SNAP" ")"; stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.X/conftest.c:4:10: fatal error: 'xorg/xorg-server.h' file not found #include "xorg/xorg-server.h" ^~~~~~~~~~~~~~~~~~~~ 1 error generated. Source: #include "confdefs.h" #include "conffix.h" #include "xorg/xorg-server.h" #include "xorg/xorgVersion.h" #define PetscXstr_(s) PetscStr_(s) #define PetscStr_(s) #s char *ver = "petscpkgver(" PetscXstr_(XORG_VERSION_MAJOR.XORG_VERSION_MINOR.XORG_VERSION_PATCH.XORG_VERSION_SNAP) ")"; Found version string: char*ver=petscpkgver(XORG_VERSION_MAJOR.XORG_VERSION_MINOR.XORG_VERSION_PATCH.XORG_VERSION_SNAP) For x unable to convert version information (XORG_VERSION_MAJOR.XORG_VERSION_MINOR.XORG_VERSION_PATCH.XORG_VERSION_SNAP) to standard form, skipping version check ============================================================================================= TESTING: checkSharedLibrary from config.packages.X(config/BuildSystem/config/package.py:1004) By default we don't care about checking if the library is shared child config.packages.X took 0.134040 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.hwloc(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.hwloc(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.hwloc took 0.000778 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.thrust(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.thrust(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.thrust took 0.000405 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.cuda(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.cuda(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.cuda took 0.000370 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.OpenMPI(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.OpenMPI(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.OpenMPI took 0.000435 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.MPICH(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: checkDependencies from config.packages.MPICH(config/BuildSystem/config/package.py:912) ============================================================================================= TESTING: configureLibrary from config.packages.MPICH(config/BuildSystem/config/package.py:937) Find an installation and check if it can work with PETSc ================================================================================== Checking for a functional MPICH Executing: uname -s stdout: Darwin Looking for MPICH at git.mpich, hg.mpich or a directory starting with ['mpich'] Found a copy of MPICH in mpich-3.4.2 Executing: gcc --help | head -n 500 Detected CLANG compiler Executing: uname -s stdout: Darwin Detected Darwin/MacOSX OS Detected Darwin/MacOSX Catalina OS Executing: gfortran -v Executing: gfortran -V Executing: gfortran --version stdout: GNU Fortran (Homebrew GCC 11.2.0_3) 11.2.0 Copyright (C) 2021 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. Detected GFortran100plus compiler Executing: gfortran -V Executing: gfortran --version stdout: GNU Fortran (Homebrew GCC 11.2.0_3) 11.2.0 Copyright (C) 2021 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. Detected GFortran100plus compiler Executing: gfortran -V Executing: gfortran --version stdout: GNU Fortran (Homebrew GCC 11.2.0_3) 11.2.0 Copyright (C) 2021 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. Detected GFortran100plus compiler Executing: uname -s stdout: Darwin Detected Darwin/MacOSX OS Executing: uname -s stdout: Darwin Detected Darwin/MacOSX OS Removing configure arguments ['--disable-f90', '--enable-f90'] Removing configure arguments ['F90="gfortran"', 'F90FLAGS="-fPIC -ffree-line-length-0 -g -O0 -fallow-argument-mismatch"'] Makefile /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/petsc/conf/pkg.conf.mpich has correct checksum Do not need to rebuild MPICH Showing compiler and options used by newly built MPI Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -show stdout: gcc -fPIC -fstack-protector -fno-stack-check -Qunused-arguments -g3 -O0 -fno-common -Wno-implicit-function-declaration -Wl,-flat_namespace -Wl,-commons,use_dylibs -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include -L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -lmpi -lpmpi Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 -show stdout: gfortran -fPIC -ffree-line-length-0 -g -O0 -fallow-argument-mismatch -Wl,-flat_namespace -Wl,-commons,use_dylibs -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include -L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -lmpifort -lmpi -lpmpi Deleting "CC" Deleting "FC" ============================================================================================= TESTING: resetEnvCompilers from config.setCompilers(config/BuildSystem/config/setCompilers.py:2579) ============================================================================================= TESTING: checkEnvCompilers from config.setCompilers(config/BuildSystem/config/setCompilers.py:2595) ============================================================================================= TESTING: checkMPICompilerOverride from config.setCompilers(config/BuildSystem/config/setCompilers.py:2549) Check if --with-mpi-dir is used along with CC CXX or FC compiler options. This usually prevents mpi compilers from being used - so issue a warning ============================================================================================= TESTING: requireMpiLdPath from config.setCompilers(config/BuildSystem/config/setCompilers.py:2570) OpenMPI wrappers require LD_LIBRARY_PATH set ============================================================================================= TESTING: checkInitialFlags from config.setCompilers(config/BuildSystem/config/setCompilers.py:661) Initialize the compiler and linker flags Initialized CFLAGS to Initialized CFLAGS to Initialized LDFLAGS to Initialized CUDAFLAGS to Initialized CUDAFLAGS to Initialized LDFLAGS to Initialized HIPFLAGS to Initialized HIPFLAGS to Initialized LDFLAGS to Initialized SYCLFLAGS to Initialized SYCLFLAGS to Initialized LDFLAGS to Initialized CXXFLAGS to Initialized CXX_CXXFLAGS to Initialized LDFLAGS to Initialized FFLAGS to Initialized FFLAGS to Initialized LDFLAGS to Initialized CPPFLAGS to Initialized FPPFLAGS to Initialized CUDAPPFLAGS to -Wno-deprecated-gpu-targets Initialized CXXPPFLAGS to Initialized HIPPPFLAGS to Initialized SYCLPPFLAGS to Initialized CC_LINKER_FLAGS to ['-Wl,-bind_at_load', '-Wl,-multiply_defined,suppress', '-Wl,-multiply_defined -Wl,suppress', '-Wl,-commons,use_dylibs', '-Wl,-search_paths_first', '-Wl,-no_compact_unwind'] Initialized CXX_LINKER_FLAGS to [] Initialized FC_LINKER_FLAGS to ['-Wl,-bind_at_load', '-Wl,-multiply_defined,suppress', '-Wl,-multiply_defined -Wl,suppress', '-Wl,-commons,use_dylibs', '-Wl,-search_paths_first', '-Wl,-no_compact_unwind'] Initialized CUDAC_LINKER_FLAGS to [] Initialized HIPC_LINKER_FLAGS to [] Initialized SYCLC_LINKER_FLAGS to [] Initialized sharedLibraryFlags to [] Initialized dynamicLibraryFlags to [] ============================================================================================= TESTING: checkCCompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:1274) Locate a functional C compiler Checking for program /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc...found Defined make macro "CC" to "/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc" ===== Checking compiler Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o ======== Checking running linked program ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o Testing executable /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest to see if it can be run Executing: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest Running Executable with threads to time it out at 60 Executing: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc --version stdout: Apple clang version 12.0.5 (clang-1205.0.22.11) Target: arm64-apple-darwin20.6.0 Thread model: posix InstalledDir: /Library/Developer/CommandLineTools/usr/bin Since MPI c compiler starts with mpi, force searches for other compilers to only look for MPI compilers ============================================================================================= TESTING: checkCPreprocessor from config.setCompilers(config/BuildSystem/config/setCompilers.py:1313) Locate a functional C preprocessor Checking for program /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc...found Defined make macro "CPP" to "/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -E" Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.X -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Preprocess output before filtering: : Preprocess output after filtering: : ============================================================================================= TESTING: checkCUDACompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:1349) Locate a functional CUDA compiler Checking for program /opt/homebrew/Cellar/pyenv-virtualenv/1.1.5/shims/nvcc...not found Checking for program /usr/local/share/python/nvcc...not found Checking for program /opt/homebrew/bin/nvcc...not found Checking for program /usr/local/bin/nvcc...not found Checking for program /usr/bin/nvcc...not found Checking for program /bin/nvcc...not found Checking for program /usr/sbin/nvcc...not found Checking for program /sbin/nvcc...not found Checking for program /Library/TeX/texbin/nvcc...not found Checking for program /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/lib/petsc/bin/win32fe/nvcc...not found Checking for program /Developer/NVIDIA/CUDA-6.5/bin/nvcc...not found Checking for program /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/lib/petsc/bin/win32fe/nvcc...not found Unable to find programs: ['nvcc'] in listing of the specific search path: ['/Developer/NVIDIA/CUDA-6.5/bin'] Warning accessing /Developer/NVIDIA/CUDA-6.5/bin gives errors: [Errno 2] No such file or directory: '/Developer/NVIDIA/CUDA-6.5/bin' Checking for program /usr/local/cuda/bin/nvcc...not found Checking for program /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/lib/petsc/bin/win32fe/nvcc...not found Unable to find programs: ['nvcc'] in listing of the specific search path: ['/usr/local/cuda/bin'] Warning accessing /usr/local/cuda/bin gives errors: [Errno 2] No such file or directory: '/usr/local/cuda/bin' ============================================================================================= TESTING: checkDeviceHostCompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:685) Set the host compiler (HC) of the device compiler (DC) to the HC unless the DC already explicitly sets its HC. This may be needed if the default HC used by the DC is ancient and PETSc uses a different HC (e.g., through --with-cxx=...). ============================================================================================= TESTING: checkHIPCompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:1419) Locate a functional HIP compiler Checking for program /opt/homebrew/Cellar/pyenv-virtualenv/1.1.5/shims/hipcc...not found Checking for program /usr/local/share/python/hipcc...not found Checking for program /opt/homebrew/bin/hipcc...not found Checking for program /usr/local/bin/hipcc...not found Checking for program /usr/bin/hipcc...not found Checking for program /bin/hipcc...not found Checking for program /usr/sbin/hipcc...not found Checking for program /sbin/hipcc...not found Checking for program /Library/TeX/texbin/hipcc...not found Checking for program /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/lib/petsc/bin/win32fe/hipcc...not found Checking for program /opt/homebrew/Cellar/pyenv-virtualenv/1.1.5/shims/opt/rocm/bin/hipcc...not found Checking for program /usr/local/share/python/opt/rocm/bin/hipcc...not found Checking for program /opt/homebrew/bin/opt/rocm/bin/hipcc...not found Checking for program /usr/local/bin/opt/rocm/bin/hipcc...not found Checking for program /usr/bin/opt/rocm/bin/hipcc...not found Checking for program /bin/opt/rocm/bin/hipcc...not found Checking for program /usr/sbin/opt/rocm/bin/hipcc...not found Checking for program /sbin/opt/rocm/bin/hipcc...not found Checking for program /Library/TeX/texbin/opt/rocm/bin/hipcc...not found Checking for program /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/lib/petsc/bin/win32fe/opt/rocm/bin/hipcc...not found ============================================================================================= TESTING: checkDeviceHostCompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:685) Set the host compiler (HC) of the device compiler (DC) to the HC unless the DC already explicitly sets its HC. This may be needed if the default HC used by the DC is ancient and PETSc uses a different HC (e.g., through --with-cxx=...). ============================================================================================= TESTING: checkSYCLCompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:1489) Locate a functional SYCL compiler ============================================================================================= TESTING: checkDeviceHostCompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:685) Set the host compiler (HC) of the device compiler (DC) to the HC unless the DC already explicitly sets its HC. This may be needed if the default HC used by the DC is ancient and PETSc uses a different HC (e.g., through --with-cxx=...). ============================================================================================= TESTING: checkFortranCompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:1758) Locate a functional Fortran compiler Checking for program /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90...found Defined make macro "FC" to "/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90" ===== Checking compiler Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.F90 Successful compile: Source: program main end ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.F90 Successful compile: Source: program main end Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o ======== Checking running linked program ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.F90 Successful compile: Source: program main end Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o Testing executable /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest to see if it can be run Executing: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest Running Executable with threads to time it out at 60 Executing: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 --version stdout: GNU Fortran (Homebrew GCC 11.2.0_3) 11.2.0 Copyright (C) 2021 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. ============================================================================================= TESTING: checkFortranPreprocessor from config.setCompilers(config/BuildSystem/config/setCompilers.py:1795) Locate a functional Fortran preprocessor Checking for program /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90...found Defined make macro "FPP" to "/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 -E" Preprocessing source: #define foo 10 Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.F90 Preprocess output before filtering: : Preprocess output after filtering: : ============================================================================================= TESTING: checkFortranComments from config.setCompilers(config/BuildSystem/config/setCompilers.py:1814) Make sure fortran comment "!" works ===== Checking compiler Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.F90 Successful compile: Source: program main ! comment end Fortran comments can use ! in column 1 ============================================================================================= TESTING: checkLargeFileIO from config.setCompilers(config/BuildSystem/config/setCompilers.py:1985) ============================================================================================= TESTING: checkArchiver from config.setCompilers(config/BuildSystem/config/setCompilers.py:2084) Check that the archiver exists and can make a library usable by the compiler Executing: ar -V Executing: ar -V Defined make macro "FAST_AR_FLAGS" to "Scq" ===== Checking compiler Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int foo(int a) { return a+1; } Checking for program /opt/homebrew/Cellar/pyenv-virtualenv/1.1.5/shims/ar...not found Checking for program /usr/local/share/python/ar...not found Checking for program /opt/homebrew/bin/ar...not found Checking for program /usr/local/bin/ar...not found Checking for program /usr/bin/ar...found Defined make macro "AR" to "/usr/bin/ar" Checking for program /opt/homebrew/Cellar/pyenv-virtualenv/1.1.5/shims/ranlib...not found Checking for program /usr/local/share/python/ranlib...not found Checking for program /opt/homebrew/bin/ranlib...not found Checking for program /usr/local/bin/ranlib...not found Checking for program /usr/bin/ranlib...found Defined make macro "RANLIB" to "/usr/bin/ranlib -c" Executing: /usr/bin/ar cr /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/libconf1.a /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conf1.o Executing: /usr/bin/ranlib -c /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/libconf1.a ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Possible ERROR while running compiler: stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c:6:26: warning: if statement has empty body [-Wempty-body] int b = foo(1); if (b); ^ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c:6:26: note: put the semicolon on a separate line to silence this warning 1 warning generated. Source: #include "confdefs.h" #include "conffix.h" extern int foo(int); int main() { int b = foo(1); if (b); ; return 0; } Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -L/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -lconf1 Defined make macro "AR_FLAGS" to "cr" Defined make macro "AR_LIB_SUFFIX" to "a" ============================================================================================= TESTING: checkArchiverRecipeArgfile from config.setCompilers(config/BuildSystem/config/setCompilers.py:2148) Checks if AR handles @ notation Executing: /usr/bin/ar cr checkRecipeArgfile.a @checkRecipeArgfile.args Possible ERROR while running archiver: exit code 1 stderr: ar: @checkRecipeArgfile.args: No such file or directory ============================================================================================= TESTING: checkSharedLinker from config.setCompilers(config/BuildSystem/config/setCompilers.py:2230) Check that the linker can produce shared libraries Executing: uname -s stdout: Darwin Detected Darwin/MacOSX OS Checking shared linker /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc using flags ['-dynamiclib -single_module', '-undefined dynamic_lookup', '-multiply_defined suppress', '-no_compact_unwind'] Checking for program /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc...found Defined make macro "LD_SHARED" to "/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc" Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc --help | head -n 20 stdout: OVERVIEW: clang LLVM compiler USAGE: clang [options] file... OPTIONS: -### Print (but do not run) the commands to run for this compilation --analyzer-output Static analyzer report output format (html|plist|plist-multi-file|plist-html|sarif|text). --analyze Run the static analyzer -arcmt-migrate-emit-errors Emit ARC errors even if the migrator can fix them -arcmt-migrate-report-output Output path for the plist report -B Add to search path for binaries and object files used implicitly -CC Include comments from within macros in preprocessed output -cl-denorms-are-zero OpenCL only. Allow denormals to be flushed to zero. -cl-fast-relaxed-math OpenCL only. Sets -cl-finite-math-only and -cl-unsafe-math-optimizations, and defines __FAST_RELAXED_MATH__. -cl-finite-math-only OpenCL only. Allow floating-point optimizations that assume arguments and results are not NaNs or +-Inf. -cl-fp32-correctly-rounded-divide-sqrt OpenCL only. Specify that single precision floating-point divide and sqrt used in the program source are correctly rounded. Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -qversion Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -show stdout: gcc -fPIC -fstack-protector -fno-stack-check -Qunused-arguments -g3 -O0 -fno-common -Wno-implicit-function-declaration -Wl,-flat_namespace -Wl,-commons,use_dylibs -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include -L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -lmpi -lpmpi Trying no specific compiler flag for PIC code since MPI compiler or current flags seem to provide such a flag with -fPIC Trying C compiler flag Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Output from compiling with Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest -dynamiclib -single_module -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o Valid C linker flag -dynamiclib -single_module Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest -undefined dynamic_lookup -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o Valid C linker flag -undefined dynamic_lookup Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest -multiply_defined suppress -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o Valid C linker flag -multiply_defined suppress Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest -no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o Possible ERROR while running linker: exit code 1 stderr: clang: error: unknown argument: '-no_compact_unwind' Rejecting linker flag -no_compact_unwind due to nonzero status from link Linker output before filtering: clang: error: unknown argument: '-no_compact_unwind' : Linker output after filtering: clang: error: unknown argument: '-no_compact_unwind': ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int (*fprintf_ptr)(FILE*,const char*,...) = fprintf; void foo(void){ fprintf_ptr(stdout,"hello"); return; } void bar(void){foo();} Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/libconftest.dylib -dynamiclib -single_module -undefined dynamic_lookup -multiply_defined suppress /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int foo(void); int main() { int ret = foo(); if (ret) {} ; return 0; } Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -L/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -lconftest Using shared linker /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc with flags ['-dynamiclib -single_module', '-undefined dynamic_lookup', '-multiply_defined suppress'] and library extension dylib Executing: uname -s stdout: Darwin Detected Darwin/MacOSX OS ============================================================================================= TESTING: checkLinkerMac from config.setCompilers(config/BuildSystem/config/setCompilers.py:2305) Tests some Apple Mac specific linker flags Defined "PETSC_USING_DARWIN" to "1" Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest -Wl,-bind_at_load -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o Valid C linker flag -Wl,-bind_at_load Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest -Wl,-multiply_defined,suppress -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o Valid C linker flag -Wl,-multiply_defined,suppress Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest -Wl,-multiply_defined -Wl,suppress -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o Valid C linker flag -Wl,-multiply_defined -Wl,suppress Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest -Wl,-commons,use_dylibs -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o Valid C linker flag -Wl,-commons,use_dylibs Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest -Wl,-search_paths_first -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o Valid C linker flag -Wl,-search_paths_first Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o Valid C linker flag -Wl,-no_compact_unwind Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.F90 Successful compile: Source: program main end Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest -Wl,-bind_at_load -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o Valid FC linker flag -Wl,-bind_at_load Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.F90 Successful compile: Source: program main end Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest -Wl,-multiply_defined,suppress -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o Valid FC linker flag -Wl,-multiply_defined,suppress Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.F90 Successful compile: Source: program main end Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest -Wl,-multiply_defined -Wl,suppress -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o Valid FC linker flag -Wl,-multiply_defined -Wl,suppress Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.F90 Successful compile: Source: program main end Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest -Wl,-commons,use_dylibs -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o Valid FC linker flag -Wl,-commons,use_dylibs Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.F90 Successful compile: Source: program main end Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest -Wl,-search_paths_first -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o Valid FC linker flag -Wl,-search_paths_first Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.F90 Successful compile: Source: program main end Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o Valid FC linker flag -Wl,-no_compact_unwind Executing: uname -s stdout: Darwin ============================================================================================= TESTING: checkPIC from config.setCompilers(config/BuildSystem/config/setCompilers.py:1935) Determine the PIC option for each compiler Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 --help | head -n 20 stdout: Usage: gfortran [options] file... Options: -pass-exit-codes Exit with highest error code from a phase. --help Display this information. --target-help Display target specific command line options. --help={common|optimizers|params|target|warnings|[^]{joined|separate|undocumented}}[,...]. Display specific types of command line options. (Use '-v --help' to display command line options of sub-processes). --version Display compiler version information. -dumpspecs Display all of the built in spec strings. -dumpversion Display the version of the compiler. -dumpmachine Display the compiler's target processor. -print-search-dirs Display the directories in the compiler's search path. -print-libgcc-file-name Display the name of the compiler's companion library. -print-file-name= Display the full path to library . -print-prog-name= Display the full path to compiler component . -print-multiarch Display the target's normalized GNU triplet, used as a component in the library path. -print-multi-directory Display the root directory for versions of libgcc. -print-multi-lib Display the mapping between command line options and Detected GNU compiler Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 -show stdout: gfortran -fPIC -ffree-line-length-0 -g -O0 -fallow-argument-mismatch -Wl,-flat_namespace -Wl,-commons,use_dylibs -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include -L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -lmpifort -lmpi -lpmpi Trying no specific compiler flag for PIC code since MPI compiler or current flags seem to provide such a flag with -fPIC Trying FC for PIC code without any compiler flag Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.F90 Successful compile: Source: program main end Output from compiling with ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.F90 Successful compile: Source: function foo(a) real:: a,x,bar common /xx/ x x=a foo = bar(x) end Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/libconftest.dylib -dynamiclib -single_module -undefined dynamic_lookup -multiply_defined suppress /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o Possible ERROR while running linker: stderr: ld: warning: object file (/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o) was built for newer macOS version (11.5) than being linked (11.0) Linker output before filtering: ld: warning: object file (/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o) was built for newer macOS version (11.5) than being linked (11.0) : Linker output after filtering: : Accepted FC PIC code without compiler flag ============================================================================================= TESTING: checkSharedLinkerPaths from config.setCompilers(config/BuildSystem/config/setCompilers.py:2344) Determine the shared linker path options - IRIX: -rpath - Linux, OSF: -Wl,-rpath, - Solaris: -R - FreeBSD: -Wl,-R, Executing: uname -s stdout: Darwin Detected Darwin/MacOSX OS Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -V Trying C linker flag -Wl,-rpath, Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest -Wl,-rpath,/Users/veronikaulanova/Documents/documents/Oxford_work/petsc -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o Valid C linker flag -Wl,-rpath,/Users/veronikaulanova/Documents/documents/Oxford_work/petsc Executing: uname -s stdout: Darwin Detected Darwin/MacOSX OS Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -V Trying FC linker flag -Wl,-rpath, Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.F90 Successful compile: Source: program main end Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest -Wl,-rpath,/Users/veronikaulanova/Documents/documents/Oxford_work/petsc -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o Valid FC linker flag -Wl,-rpath,/Users/veronikaulanova/Documents/documents/Oxford_work/petsc ============================================================================================= TESTING: checkLibC from config.setCompilers(config/BuildSystem/config/setCompilers.py:2383) Test whether we need to explicitly include libc in shared linking - Mac OSX requires an explicit reference to libc for shared linking ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int foo(void) {void *chunk = malloc(31); free(chunk); return 0;} Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/libconftest.dylib -dynamiclib -single_module -undefined dynamic_lookup -multiply_defined suppress /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o Shared linking does not require an explicit libc reference ============================================================================================= TESTING: checkDynamicLinker from config.setCompilers(config/BuildSystem/config/setCompilers.py:2429) Check that the linker can dynamicaly load shared libraries Checking for header: dlfcn.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.X -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Preprocess output before filtering: : Preprocess output after filtering: : Defined "HAVE_DLFCN_H" to "1" Checking for functions [dlopen dlsym dlclose] in library ['dl'] [] ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dlopen(); static void _check_dlopen() { dlopen(); } char dlsym(); static void _check_dlsym() { dlsym(); } char dlclose(); static void _check_dlclose() { dlclose(); } int main() { _check_dlopen(); _check_dlsym(); _check_dlclose();; return 0; } Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.o -ldl ===== Checking compiler Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dlopen(); static void _check_dlopen() { dlopen(); } char dlsym(); static void _check_dlsym() { dlsym(); } char dlclose(); static void _check_dlclose() { dlclose(); } void dummy(void) {_check_dlopen(); _check_dlsym(); _check_dlclose();} ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.F90 Successful compile: Source: program main print*,'testing' stop end Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/confc.o -ldl Defined "HAVE_LIBDL" to "1" Adding ['dl'] to LIBS Executing: uname -s stdout: Darwin Detected Darwin/MacOSX OS Checking dynamic linker /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc using flags ['-dynamiclib -single_module -undefined dynamic_lookup -multiply_defined suppress'] Checking for program /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc...found Defined make macro "DYNAMICLINKER" to "/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc" Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest -dynamiclib -single_module -undefined dynamic_lookup -multiply_defined suppress -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -ldl Valid C linker flag -dynamiclib -single_module -undefined dynamic_lookup -multiply_defined suppress ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int foo(void) {printf("test");return 0;} Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/libconftest.dylib -dynamiclib -single_module -undefined dynamic_lookup -multiply_defined suppress /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -ldl ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include int main() { void *handle = dlopen("/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/libconftest.dylib", 0); int (*foo)(void) = (int (*)(void)) dlsym(handle, "foo"); if (!foo) { printf("Could not load symbol\n"); return -1; } if ((*foo)()) { printf("Invalid return from foo()\n"); return -1; } if (dlclose(handle)) { printf("Could not close library\n"); return -1; } ; return 0; } Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -ldl Using dynamic linker /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc with flags ['-dynamiclib -single_module -undefined dynamic_lookup -multiply_defined suppress'] and library extension dylib ============================================================================================= TESTING: checkPragma from config.setCompilers(config/BuildSystem/config/setCompilers.py:1894) Check for all available applicable languages whether they complain (including warnings!) about potentially unknown pragmas Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -Wunknown-pragmas /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Output from compiling with -Wunknown-pragmas Added C compiler flag -Wunknown-pragmas ===== Checking compiler Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -Wunknown-pragmas /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #pragma GCC poison TEST int main() { ; return 0; } ============================================================================================= TESTING: output from config.setCompilers(config/BuildSystem/config/setCompilers.py:2478) Output module data as defines and substitutions Substituting "CC" with "/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc" Substituting "CFLAGS" with "" Defined make macro "CC_LINKER_SLFLAG" to "-Wl,-rpath," Substituting "CPP" with "/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -E" Substituting "CPPFLAGS" with "" Substituting "CXX" with "" Substituting "FC" with "/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90" Substituting "FFLAGS" with "" Defined make macro "FC_LINKER_SLFLAG" to "-Wl,-rpath," Substituting "LDFLAGS" with "" Substituting "FPP" with "/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 -E" Substituting "FPPFLAGS" with "" Substituting "LIBS" with "-ldl " Substituting "SHARED_LIBRARY_FLAG" with "-dynamiclib -single_module -undefined dynamic_lookup -multiply_defined suppress" ============================================================================================= TESTING: configureCompilerFlags from config.compilerFlags(config/BuildSystem/config/compilerFlags.py:82) Get the default compiler flags Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc --version stdout: Apple clang version 12.0.5 (clang-1205.0.22.11) Target: arm64-apple-darwin20.6.0 Thread model: posix InstalledDir: /Library/Developer/CommandLineTools/usr/bin getCompilerVersion: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc Apple clang version 12.0.5 (clang-1205.0.22.11) Defined make macro "C_VERSION" to "Apple clang version 12.0.5 (clang-1205.0.22.11)" Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -show stdout: gcc -fPIC -fstack-protector -fno-stack-check -Qunused-arguments -g3 -O0 -fno-common -Wno-implicit-function-declaration -Wl,-flat_namespace -Wl,-commons,use_dylibs -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include -L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -lmpi -lpmpi Defined make macro "MPICC_SHOW" to "gcc -fPIC -fstack-protector -fno-stack-check -Qunused-arguments -g3 -O0 -fno-common -Wno-implicit-function-declaration -Wl,-flat_namespace -Wl,-commons,use_dylibs -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include -L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -lmpi -lpmpi" Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc --help | head -n 20 stdout: OVERVIEW: clang LLVM compiler USAGE: clang [options] file... OPTIONS: -### Print (but do not run) the commands to run for this compilation --analyzer-output Static analyzer report output format (html|plist|plist-multi-file|plist-html|sarif|text). --analyze Run the static analyzer -arcmt-migrate-emit-errors Emit ARC errors even if the migrator can fix them -arcmt-migrate-report-output Output path for the plist report -B Add to search path for binaries and object files used implicitly -CC Include comments from within macros in preprocessed output -cl-denorms-are-zero OpenCL only. Allow denormals to be flushed to zero. -cl-fast-relaxed-math OpenCL only. Sets -cl-finite-math-only and -cl-unsafe-math-optimizations, and defines __FAST_RELAXED_MATH__. -cl-finite-math-only OpenCL only. Allow floating-point optimizations that assume arguments and results are not NaNs or +-Inf. -cl-fp32-correctly-rounded-divide-sqrt OpenCL only. Specify that single precision floating-point divide and sqrt used in the program source are correctly rounded. Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc --help | head -n 500 Detected CLANG compiler Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc --version stdout: Apple clang version 12.0.5 (clang-1205.0.22.11) Target: arm64-apple-darwin20.6.0 Thread model: posix InstalledDir: /Library/Developer/CommandLineTools/usr/bin Executing: uname -s stdout: Darwin Detected Darwin/MacOSX OS Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc --help | head -n 20 stdout: OVERVIEW: clang LLVM compiler USAGE: clang [options] file... OPTIONS: -### Print (but do not run) the commands to run for this compilation --analyzer-output Static analyzer report output format (html|plist|plist-multi-file|plist-html|sarif|text). --analyze Run the static analyzer -arcmt-migrate-emit-errors Emit ARC errors even if the migrator can fix them -arcmt-migrate-report-output Output path for the plist report -B Add to search path for binaries and object files used implicitly -CC Include comments from within macros in preprocessed output -cl-denorms-are-zero OpenCL only. Allow denormals to be flushed to zero. -cl-fast-relaxed-math OpenCL only. Sets -cl-finite-math-only and -cl-unsafe-math-optimizations, and defines __FAST_RELAXED_MATH__. -cl-finite-math-only OpenCL only. Allow floating-point optimizations that assume arguments and results are not NaNs or +-Inf. -cl-fp32-correctly-rounded-divide-sqrt OpenCL only. Specify that single precision floating-point divide and sqrt used in the program source are correctly rounded. Detected Darwin/MacOSX Catalina OS Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc --help | head -n 500 Detected CLANG compiler Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc --help | head -n 500 Detected CLANG compiler Trying C compiler flag -Wall Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -Wall /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Output from compiling with -Wall Added C compiler flag -Wall Trying C compiler flag -Wwrite-strings Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -Wall -Wwrite-strings /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Output from compiling with -Wall -Wwrite-strings Added C compiler flag -Wwrite-strings Trying C compiler flag -Wno-unknown-pragmas Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -Wall -Wwrite-strings -Wno-unknown-pragmas /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Output from compiling with -Wall -Wwrite-strings -Wno-unknown-pragmas Added C compiler flag -Wno-unknown-pragmas Trying C compiler flag -fstack-protector Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Output from compiling with -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector Added C compiler flag -fstack-protector Trying C compiler flag -fno-stack-check Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Output from compiling with -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check Added C compiler flag -fno-stack-check Trying C compiler flag -mfp16-format=ieee Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -mfp16-format=ieee /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Possible ERROR while running compiler: exit code 1 stderr: clang: error: unknown argument: '-mfp16-format=ieee' Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Output from compiling with -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -mfp16-format=ieee Rejecting compiler flag -mfp16-format=ieee due to nonzero status from link Rejected C compiler flag -mfp16-format=ieee Trying C compiler flag -Qunused-arguments Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Output from compiling with -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments Added C compiler flag -Qunused-arguments Trying C compiler flag -fvisibility=hidden Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Output from compiling with -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden Added C compiler flag -fvisibility=hidden Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -show stdout: gcc -fPIC -fstack-protector -fno-stack-check -Qunused-arguments -g3 -O0 -fno-common -Wno-implicit-function-declaration -Wl,-flat_namespace -Wl,-commons,use_dylibs -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include -L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -lmpi -lpmpi Defined make macro "MPICC_SHOW" to "gcc -fPIC -fstack-protector -fno-stack-check -Qunused-arguments -g3 -O0 -fno-common -Wno-implicit-function-declaration -Wl,-flat_namespace -Wl,-commons,use_dylibs -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include -L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -lmpi -lpmpi" Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc --help | head -n 20 stdout: OVERVIEW: clang LLVM compiler USAGE: clang [options] file... OPTIONS: -### Print (but do not run) the commands to run for this compilation --analyzer-output Static analyzer report output format (html|plist|plist-multi-file|plist-html|sarif|text). --analyze Run the static analyzer -arcmt-migrate-emit-errors Emit ARC errors even if the migrator can fix them -arcmt-migrate-report-output Output path for the plist report -B Add to search path for binaries and object files used implicitly -CC Include comments from within macros in preprocessed output -cl-denorms-are-zero OpenCL only. Allow denormals to be flushed to zero. -cl-fast-relaxed-math OpenCL only. Sets -cl-finite-math-only and -cl-unsafe-math-optimizations, and defines __FAST_RELAXED_MATH__. -cl-finite-math-only OpenCL only. Allow floating-point optimizations that assume arguments and results are not NaNs or +-Inf. -cl-fp32-correctly-rounded-divide-sqrt OpenCL only. Specify that single precision floating-point divide and sqrt used in the program source are correctly rounded. Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc --help | head -n 500 Detected CLANG compiler Trying C compiler flag -g3 Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Output from compiling with -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 Added C compiler flag -g3 Trying C compiler flag -O0 Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Output from compiling with -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 Added C compiler flag -O0 Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 --version stdout: GNU Fortran (Homebrew GCC 11.2.0_3) 11.2.0 Copyright (C) 2021 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. getCompilerVersion: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 GNU Fortran (Homebrew GCC 11.2.0_3) 11.2.0 Defined make macro "FC_VERSION" to "GNU Fortran (Homebrew GCC 11.2.0_3) 11.2.0" Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 -show stdout: gfortran -fPIC -ffree-line-length-0 -g -O0 -fallow-argument-mismatch -Wl,-flat_namespace -Wl,-commons,use_dylibs -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include -L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -lmpifort -lmpi -lpmpi Defined make macro "MPIFC_SHOW" to "gfortran -fPIC -ffree-line-length-0 -g -O0 -fallow-argument-mismatch -Wl,-flat_namespace -Wl,-commons,use_dylibs -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include -L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -lmpifort -lmpi -lpmpi" Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 --help | head -n 20 stdout: Usage: gfortran [options] file... Options: -pass-exit-codes Exit with highest error code from a phase. --help Display this information. --target-help Display target specific command line options. --help={common|optimizers|params|target|warnings|[^]{joined|separate|undocumented}}[,...]. Display specific types of command line options. (Use '-v --help' to display command line options of sub-processes). --version Display compiler version information. -dumpspecs Display all of the built in spec strings. -dumpversion Display the version of the compiler. -dumpmachine Display the compiler's target processor. -print-search-dirs Display the directories in the compiler's search path. -print-libgcc-file-name Display the name of the compiler's companion library. -print-file-name= Display the full path to library . -print-prog-name= Display the full path to compiler component . -print-multiarch Display the target's normalized GNU triplet, used as a component in the library path. -print-multi-directory Display the root directory for versions of libgcc. -print-multi-lib Display the mapping between command line options and Detected GNU compiler Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 --version stdout: GNU Fortran (Homebrew GCC 11.2.0_3) 11.2.0 Copyright (C) 2021 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. Detected GFortran46plus compiler Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 --version stdout: GNU Fortran (Homebrew GCC 11.2.0_3) 11.2.0 Copyright (C) 2021 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. Detected GFortran47plus compiler Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 --version stdout: GNU Fortran (Homebrew GCC 11.2.0_3) 11.2.0 Copyright (C) 2021 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. Trying FC compiler flag -Wall Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -Wall /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.F90 Successful compile: Source: program main end Output from compiling with -Wall Added FC compiler flag -Wall Trying FC compiler flag -ffree-line-length-0 Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -Wall -ffree-line-length-0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.F90 Successful compile: Source: program main end Output from compiling with -Wall -ffree-line-length-0 Added FC compiler flag -ffree-line-length-0 Trying FC compiler flag -Wno-unused-dummy-argument Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -Wall -ffree-line-length-0 -Wno-unused-dummy-argument /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.F90 Successful compile: Source: program main end Output from compiling with -Wall -ffree-line-length-0 -Wno-unused-dummy-argument Added FC compiler flag -Wno-unused-dummy-argument Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 -show stdout: gfortran -fPIC -ffree-line-length-0 -g -O0 -fallow-argument-mismatch -Wl,-flat_namespace -Wl,-commons,use_dylibs -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include -L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -lmpifort -lmpi -lpmpi Defined make macro "MPIFC_SHOW" to "gfortran -fPIC -ffree-line-length-0 -g -O0 -fallow-argument-mismatch -Wl,-flat_namespace -Wl,-commons,use_dylibs -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include -L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -lmpifort -lmpi -lpmpi" Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 --help | head -n 20 stdout: Usage: gfortran [options] file... Options: -pass-exit-codes Exit with highest error code from a phase. --help Display this information. --target-help Display target specific command line options. --help={common|optimizers|params|target|warnings|[^]{joined|separate|undocumented}}[,...]. Display specific types of command line options. (Use '-v --help' to display command line options of sub-processes). --version Display compiler version information. -dumpspecs Display all of the built in spec strings. -dumpversion Display the version of the compiler. -dumpmachine Display the compiler's target processor. -print-search-dirs Display the directories in the compiler's search path. -print-libgcc-file-name Display the name of the compiler's companion library. -print-file-name= Display the full path to library . -print-prog-name= Display the full path to compiler component . -print-multiarch Display the target's normalized GNU triplet, used as a component in the library path. -print-multi-directory Display the root directory for versions of libgcc. -print-multi-lib Display the mapping between command line options and Detected GNU compiler Trying FC compiler flag -g Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.F90 Successful compile: Source: program main end Output from compiling with -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g Added FC compiler flag -g Trying FC compiler flag -O0 Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.F90 Successful compile: Source: program main end Output from compiling with -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 Added FC compiler flag -O0 ============================================================================================= TESTING: checkIntelHardwareSupport from config.compilerFlags(config/BuildSystem/config/compilerFlags.py:173) Use Linux/MacOS commands to determine what operations the hardware supports Executing: lscpu Executing: sysctl -a stdout: user.cs_path: /usr/bin:/bin:/usr/sbin:/sbin user.bc_base_max: 99 user.bc_dim_max: 2048 user.bc_scale_max: 99 user.bc_string_max: 1000 user.coll_weights_max: 2 user.expr_nest_max: 32 user.line_max: 2048 user.re_dup_max: 255 user.posix2_version: 200112 user.posix2_c_bind: 0 user.posix2_c_dev: 0 user.posix2_char_term: 0 user.posix2_fort_dev: 0 user.posix2_fort_run: 0 user.posix2_localedef: 0 user.posix2_sw_dev: 0 user.posix2_upe: 0 user.stream_max: 20 user.tzname_max: 255 kern.ostype: Darwin kern.osrelease: 20.6.0 kern.osrevision: 199506 kern.version: Darwin Kernel Version 20.6.0: Wed Jun 23 00:26:27 PDT 2021; root:xnu-7195.141.2~5/RELEASE_ARM64_T8101 kern.maxvnodes: 119296 kern.maxproc: 2000 kern.maxfiles: 12288 kern.argmax: 1048576 kern.securelevel: 0 kern.hostname: Veronikas-Air kern.hostid: 0 kern.clockrate: { hz = 100, tick = 10000, tickadj = 0, profhz = 100, stathz = 100 } kern.posix1version: 200112 kern.ngroups: 16 kern.job_control: 1 kern.saved_ids: 1 kern.boottime: { sec = 1646661100, usec = 321125 } Mon Mar 7 13:51:40 2022 kern.nisdomainname: kern.maxfilesperproc: 10240 kern.maxprocperuid: 1333 kern.ipc.maxsockbuf: 8388608 kern.ipc.sockbuf_waste_factor: 8 kern.ipc.somaxconn: 128 kern.ipc.nmbclusters: 65536 kern.ipc.soqlimitcompat: 1 kern.ipc.io_policy.log: 0 kern.ipc.io_policy.uuid: 1 kern.ipc.mb_drain_force: 0 kern.ipc.mb_drain_maxint: 0 kern.ipc.mb_memory_pressure_percentage: 80 kern.ipc.mb_normalized: 0 kern.ipc.mb_watchdog: 1 kern.ipc.mleak_sample_factor: 500 kern.ipc.extbkidlercvhiwat: 131072 kern.ipc.extbkidletime: 600 kern.ipc.maxextbkidleperproc: 1 kern.ipc.socket_debug: 0 kern.ipc.sodefunct_calls: 3299 kern.ipc.sodefunctlog: 0 kern.ipc.sorecvmincopy: 16384 kern.ipc.soreserveheadroom: 1 kern.ipc.sorestrictrecv: 1 kern.ipc.sorestrictsend: 1 kern.ipc.sosendbigcl_ignore_capab: 0 kern.ipc.sosendjcl: 1 kern.ipc.sosendjcl_ignore_capab: 0 kern.ipc.sosendminchain: 16384 kern.ipc.sotcdb: 0 kern.ipc.sothrottlelog: 0 kern.ipc.njcl: 21848 kern.ipc.njclbytes: 16384 kern.ipc.sbmb_cnt: 10 kern.ipc.sbmb_cnt_floor: 1 kern.ipc.sbmb_cnt_peak: 25924 kern.ipc.sbmb_limreached: 0 kern.ipc.soqlencomp: 0 kern.ipc.throttle_best_effort: 0 kern.ipc.maxrecvmsgx: 100 kern.ipc.maxsendmsgx: 100 kern.usrstack: 1842577408 kern.netboot: 0 kern.sysv.shmall: 1024 kern.sysv.shmmax: 4194304 kern.sysv.shmmin: 1 kern.sysv.shmmni: 32 kern.sysv.shmseg: 8 kern.sysv.semmni: 87381 kern.sysv.semmns: 87381 kern.sysv.semmnu: 87381 kern.sysv.semmsl: 87381 kern.sysv.semume: 10 kern.aiomax: 90 kern.aioprocmax: 16 kern.aiothreads: 4 kern.corefile: /cores/core.%P kern.coredump: 1 kern.sugid_coredump: 0 kern.delayterm: 0 kern.shreg_private: 0 kern.posix.sem.max: 10000 kern.usrstack64: 6137544704 kern.tfp.policy: 2 kern.procname: sysctl kern.speculative_reads_disabled: 0 kern.osversion: 20G80 kern.safeboot: 0 kern.rage_vnode: 0 kern.tty.ptmx_max: 511 kern.check_openevt: 0 kern.threadname: kern.timer.longterm.qlen: 0 kern.timer.longterm.scan_interval: 100000 kern.timer.longterm.scan_limit: 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kern.dtrace.buffer_memory_inuse: 0 kern.dtrace.buffer_memory_maxsize: 2863311530 kern.dtrace.difo_maxsize: 262144 kern.dtrace.dof_maxsize: 524288 kern.dtrace.dof_mode: 1 kern.dtrace.err_verbose: 0 kern.dtrace.global_maxsize: 16384 kern.dtrace.provide_private_probes: 1 kern.dtrace.ignore_fbt_blacklist: 0 kern.skywalk.netif.default_drop: 0 kern.skywalk.flowswitch.ip_reass: 1 kern.skywalk.flowswitch.rx_agg_tcp: 16384 kern.skywalk.flowswitch.rx_agg_tcp_host: 2 kern.skywalk.flowswitch.ipfm_frag_ttl: 60 kern.skywalk.flowswitch.ipfm_timeout_tcall_ival: 1 kern.skywalk.flowswitch.flow_route_expire: 600 kern.skywalk.flowswitch.anpi1.ipfm.frag_limit: 352 kern.skywalk.flowswitch.anpi1.ipfm.frag_count: 0 kern.skywalk.flowswitch.anpi1.ipfm.queue_limit: 176 kern.skywalk.flowswitch.anpi1.ipfm.queue_count: 0 kern.skywalk.flowswitch.anpi0.ipfm.frag_limit: 352 kern.skywalk.flowswitch.anpi0.ipfm.frag_count: 0 kern.skywalk.flowswitch.anpi0.ipfm.queue_limit: 176 kern.skywalk.flowswitch.anpi0.ipfm.queue_count: 0 kern.skywalk.flowswitch.en4.ipfm.frag_limit: 352 kern.skywalk.flowswitch.en4.ipfm.frag_count: 0 kern.skywalk.flowswitch.en4.ipfm.queue_limit: 176 kern.skywalk.flowswitch.en4.ipfm.queue_count: 0 kern.skywalk.flowswitch.en3.ipfm.frag_limit: 352 kern.skywalk.flowswitch.en3.ipfm.frag_count: 0 kern.skywalk.flowswitch.en3.ipfm.queue_limit: 176 kern.skywalk.flowswitch.en3.ipfm.queue_count: 0 kern.skywalk.flowswitch.en1.ipfm.frag_limit: 992 kern.skywalk.flowswitch.en1.ipfm.frag_count: 0 kern.skywalk.flowswitch.en1.ipfm.queue_limit: 496 kern.skywalk.flowswitch.en1.ipfm.queue_count: 0 kern.skywalk.flowswitch.en2.ipfm.frag_limit: 992 kern.skywalk.flowswitch.en2.ipfm.frag_count: 0 kern.skywalk.flowswitch.en2.ipfm.queue_limit: 496 kern.skywalk.flowswitch.en2.ipfm.queue_count: 0 kern.skywalk.flowswitch.en0.ipfm.frag_limit: 352 kern.skywalk.flowswitch.en0.ipfm.frag_count: 0 kern.skywalk.flowswitch.en0.ipfm.queue_limit: 176 kern.skywalk.flowswitch.en0.ipfm.queue_count: 0 kern.skywalk.flowswitch.awdl0.ipfm.frag_limit: 352 kern.skywalk.flowswitch.awdl0.ipfm.frag_count: 0 kern.skywalk.flowswitch.awdl0.ipfm.queue_limit: 176 kern.skywalk.flowswitch.awdl0.ipfm.queue_count: 0 kern.skywalk.flowswitch.ap1.ipfm.frag_limit: 352 kern.skywalk.flowswitch.ap1.ipfm.frag_count: 0 kern.skywalk.flowswitch.ap1.ipfm.queue_limit: 176 kern.skywalk.flowswitch.ap1.ipfm.queue_count: 0 kern.skywalk.ring_stat_enable: 0 kern.jetsam_aging_policy: 2 kern.memorystatus_apps_idle_delay_time: 10 kern.memorystatus_level: 50 kern.memorystatus_sysprocs_idle_delay_time: 10 kern.memorystatus_purge_on_critical: 8 kern.memorystatus_purge_on_urgent: 5 kern.memorystatus_purge_on_warning: 2 kern.vm_pressure_level_transition_threshold: 30 kern.msgbuf: 131072 kern.task_exc_guard_default: 0 kern.ulock_adaptive_spin_usecs: 20 kern.secure_kernel: 0 kern.willuserspacereboot: 0 kern.maxnbuf: 9461 kern.nbuf: 9461 kern.flush_cache_on_write: 0 kern.wq_max_constrained_threads: 64 kern.wq_max_threads: 512 kern.wq_max_timer_interval_usecs: 50000 kern.wq_reduce_pool_window_usecs: 5000000 kern.wq_stalled_window_usecs: 200 kern.ds_supgroups_supported: 1 kern.libmalloc_experiments: 0 kern.sugid_scripts: 0 kern.affinity_sets_enabled: 1 kern.affinity_sets_mapping: 1 kern.apfsprebootuuid: E11AA67D-78F8-482A-B213-6F50142CB4BD kern.bootargs: kern.bootsessionuuid: 2D9FA5DB-37B0-443A-8F03-C0B562E25B8D kern.bootuuid: E11AA67D-78F8-482A-B213-6F50142CB4BD kern.cpu_checkin_interval: 4000 kern.darkboot: 0 kern.direct_handoff: 1 kern.filesetuuid: E46841F8-9DC3-FD7A-CEC6-F404AC995579 kern.free_vnodes: 96144 kern.hv_disable: 0 kern.hv_support: 1 kern.hv_vmm_present: 0 kern.ikm_signature_failure_id: 0 kern.ikm_signature_failures: 0 kern.iossupportversion: 14.7 kern.ipc_portbt: 0 kern.ipc_voucher_trace_contents: 0 kern.kern_feature_overrides: 1 kern.kernelcacheuuid: E46841F8-9DC3-FD7A-CEC6-F404AC995579 kern.minimalboot: 0 kern.namecache_disabled: 0 kern.num_files: 4768 kern.num_recycledvnodes: 4397451 kern.num_static_scalable_counters: 31 kern.num_tasks: 2048 kern.num_taskthreads: 2048 kern.num_threads: 10240 kern.num_vnodes: 119296 kern.osproductversion: 11.5.1 kern.osproductversioncompat: 10.16 kern.osreleasetype: User kern.preheat_max_bytes: 1048576 kern.preheat_min_bytes: 32768 kern.sched: edge kern.sched_allow_NO_SMT_threads: 1 kern.sched_enable_smt: 1 kern.singleuser: 0 kern.slide: 1 kern.speculative_prefetch_max: 201326592 kern.speculative_prefetch_max_iosize: 524288 kern.stack_depth_max: 0 kern.stack_size: 16384 kern.system_version_compat: 0 kern.thread_groups_supported: 1 kern.timer_coalesce_bg_ns_max: 100000000 kern.timer_coalesce_bg_scale: -5 kern.timer_coalesce_fp_ns_max: 1000000 kern.timer_coalesce_fp_scale: 3 kern.timer_coalesce_kt_ns_max: 1000000 kern.timer_coalesce_kt_scale: 3 kern.timer_coalesce_tier0_ns_max: 1000000 kern.timer_coalesce_tier0_scale: 3 kern.timer_coalesce_tier1_ns_max: 5000000 kern.timer_coalesce_tier1_scale: 2 kern.timer_coalesce_tier2_ns_max: 20000000 kern.timer_coalesce_tier2_scale: 1 kern.timer_coalesce_tier3_ns_max: 75000000 kern.timer_coalesce_tier3_scale: -2 kern.timer_coalesce_tier4_ns_max: 1000000 kern.timer_coalesce_tier4_scale: 3 kern.timer_coalesce_tier5_ns_max: 1000000 kern.timer_coalesce_tier5_scale: 3 kern.timer_coalesce_ts_ns_max: 1000000 kern.timer_coalesce_ts_scale: 3 kern.timer_resort_threshold_ns: 50000000 kern.trial_deployment_id: -1 kern.trial_experiment_id: kern.trial_treatment_id: kern.uuid: AC4A14A7-8A8E-3AE6-85A6-55E6B2502BF9 kern.vfsnspace: 0 kern.vm_max_batch: 256 kern.vm_max_delayed_work_limit: 32 kern.vm_page_free_min: 3500 kern.vm_page_free_reserved: 776 kern.vm_page_free_target: 4000 kern.vm_page_speculative_percentage: 5 kern.vm_page_speculative_q_age_ms: 500 kern.progressmeterenable: 0 kern.useractive_abs_time: 15345478090361 kern.userinactive_abs_time: 0 kern.bootsignature: kern.hibernatefile: /var/vm/sleepimage kern.hibernatemode: 0 kern.hibernatecount: 2 kern.hibernatehidready: 0 kern.hibernategraphicsready: 0 kern.hibernatelockscreenready: 0 kern.hibernatewakenotification: 0 kern.pmtimeout: 0 kern.iokittest: 0 kern.aotmode: 0 kern.waketime: { sec = 1649405491, usec = 287319 } Fri Apr 8 09:11:31 2022 kern.sleeptime: { sec = 1649404881, usec = 296784 } Fri Apr 8 09:01:21 2022 kern.wakereason: SMC.OutboxNotEmpty smc.70070000 lid kern.aotmodebits: 0 kern.willshutdown: 0 kern.progressmeter: 61 kern.wake_abs_time: 15345477599391 kern.consoleoptions: 0 kern.sleep_abs_time: 15345476521050 kern.prng.scheduled_reseed_count: 87248 kern.prng.scheduled_reseed_max_sample_count: 9197797 kern.prng.entropy_max_sample_count: 11202 kern.prng.pool_0.sample_count: 0 kern.prng.pool_0.drain_count: 87248 kern.prng.pool_0.max_sample_count: 8394 kern.prng.pool_1.sample_count: 32 kern.prng.pool_1.drain_count: 43624 kern.prng.pool_1.max_sample_count: 10589 kern.prng.pool_2.sample_count: 33 kern.prng.pool_2.drain_count: 21812 kern.prng.pool_2.max_sample_count: 9766 kern.prng.pool_3.sample_count: 33 kern.prng.pool_3.drain_count: 10906 kern.prng.pool_3.max_sample_count: 11020 kern.prng.pool_4.sample_count: 47 kern.prng.pool_4.drain_count: 5453 kern.prng.pool_4.max_sample_count: 16167 kern.prng.pool_5.sample_count: 1293 kern.prng.pool_5.drain_count: 2726 kern.prng.pool_5.max_sample_count: 24982 kern.prng.pool_6.sample_count: 1738 kern.prng.pool_6.drain_count: 1363 kern.prng.pool_6.max_sample_count: 38876 kern.prng.pool_7.sample_count: 10926 kern.prng.pool_7.drain_count: 681 kern.prng.pool_7.max_sample_count: 53671 kern.prng.pool_8.sample_count: 43097 kern.prng.pool_8.drain_count: 340 kern.prng.pool_8.max_sample_count: 73063 kern.prng.pool_9.sample_count: 43103 kern.prng.pool_9.drain_count: 170 kern.prng.pool_9.max_sample_count: 116691 kern.prng.pool_10.sample_count: 42563 kern.prng.pool_10.drain_count: 85 kern.prng.pool_10.max_sample_count: 156604 kern.prng.pool_11.sample_count: 197533 kern.prng.pool_11.drain_count: 42 kern.prng.pool_11.max_sample_count: 260311 kern.prng.pool_12.sample_count: 195245 kern.prng.pool_12.drain_count: 21 kern.prng.pool_12.max_sample_count: 428872 kern.prng.pool_13.sample_count: 528442 kern.prng.pool_13.drain_count: 10 kern.prng.pool_13.max_sample_count: 788796 kern.prng.pool_14.sample_count: 505639 kern.prng.pool_14.drain_count: 5 kern.prng.pool_14.max_sample_count: 1397591 kern.prng.pool_15.sample_count: 1654649 kern.prng.pool_15.drain_count: 2 kern.prng.pool_15.max_sample_count: 2427923 kern.prng.pool_16.sample_count: 1673857 kern.prng.pool_16.drain_count: 1 kern.prng.pool_16.max_sample_count: 4630834 kern.prng.pool_17.sample_count: 6213727 kern.prng.pool_17.drain_count: 0 kern.prng.pool_17.max_sample_count: 6213727 kern.prng.pool_18.sample_count: 6267255 kern.prng.pool_18.drain_count: 0 kern.prng.pool_18.max_sample_count: 6267255 kern.prng.pool_19.sample_count: 6260681 kern.prng.pool_19.drain_count: 0 kern.prng.pool_19.max_sample_count: 6260681 kern.prng.pool_20.sample_count: 6229082 kern.prng.pool_20.drain_count: 0 kern.prng.pool_20.max_sample_count: 6229082 kern.prng.pool_21.sample_count: 6277634 kern.prng.pool_21.drain_count: 0 kern.prng.pool_21.max_sample_count: 6277634 kern.prng.pool_22.sample_count: 6307270 kern.prng.pool_22.drain_count: 0 kern.prng.pool_22.max_sample_count: 6307270 kern.prng.pool_23.sample_count: 6296688 kern.prng.pool_23.drain_count: 0 kern.prng.pool_23.max_sample_count: 6296688 kern.prng.pool_24.sample_count: 6268968 kern.prng.pool_24.drain_count: 0 kern.prng.pool_24.max_sample_count: 6268968 kern.prng.pool_25.sample_count: 6182185 kern.prng.pool_25.drain_count: 0 kern.prng.pool_25.max_sample_count: 6182185 kern.prng.pool_26.sample_count: 6280955 kern.prng.pool_26.drain_count: 0 kern.prng.pool_26.max_sample_count: 6280955 kern.prng.pool_27.sample_count: 6193207 kern.prng.pool_27.drain_count: 0 kern.prng.pool_27.max_sample_count: 6193207 kern.prng.pool_28.sample_count: 6215668 kern.prng.pool_28.drain_count: 0 kern.prng.pool_28.max_sample_count: 6215668 kern.prng.pool_29.sample_count: 6251222 kern.prng.pool_29.drain_count: 0 kern.prng.pool_29.max_sample_count: 6251222 kern.prng.pool_30.sample_count: 6228739 kern.prng.pool_30.drain_count: 0 kern.prng.pool_30.max_sample_count: 6228739 kern.prng.pool_31.sample_count: 6274194 kern.prng.pool_31.drain_count: 0 kern.prng.pool_31.max_sample_count: 6274194 kern.monotonicclock: 34015200 kern.monotonicclock_usecs: 34015200978790 15694527558115 kern.monotonicclock_rate_usecs: 30 kern.monotoniclock_offset_usecs: 1615404832837707 kern.pthread_mutex_default_policy: 0 kern.amfm_log_ctl: 0 vm.loadavg: { 2.19 2.17 2.04 } vm.swapusage: total = 2048.00M used = 785.00M free = 1263.00M (encrypted) vm.add_wire_count_over_global_limit: 0 vm.add_wire_count_over_user_limit: 0 vm.compressor_available: 1 vm.compressor_bytes_used: 2328686272 vm.compressor_compressed_bytes: 3913382548136 vm.compressor_eval_period_in_msecs: 250 vm.compressor_input_bytes: 12975945678848 vm.compressor_is_active: 1 vm.compressor_min_csegs_per_major_compaction: 30 vm.compressor_mode: 4 vm.compressor_sample_max_in_msecs: 10000 vm.compressor_sample_min_in_msecs: 500 vm.compressor_swapout_target_age: 0 vm.compressor_swapouts_under_300s: 10768 vm.compressor_swapouts_under_30s: 12753 vm.compressor_swapouts_under_60s: 3273 vm.compressor_swapper_defrag_swapins: 19047 vm.compressor_swapper_reclaim_swapins: 42089 vm.compressor_swapper_swapout_fileq_throttled: 0 vm.compressor_swapper_swapout_fragmentation_detected: 15314433 vm.compressor_swapper_swapout_free_count_low: 0 vm.compressor_swapper_swapout_thrashing_detected: 0 vm.compressor_swapper_swapout_threshold_exceeded: 94810 vm.compressor_thrashing_min_per_10msecs: 20 vm.compressor_thrashing_threshold_per_10msecs: 50 vm.compressor_timing_enabled: 0 vm.darkwake_mode: 0 vm.global_no_user_wire_amount: 2319282340 vm.global_user_wire_limit: 6270652252 vm.lz4_compressed_bytes: 0 vm.lz4_compression_failures: 0 vm.lz4_compressions: 0 vm.lz4_decompressed_bytes: 0 vm.lz4_decompressions: 0 vm.lz4_max_failure_run_length: -1 vm.lz4_max_failure_skips: 0 vm.lz4_max_preselects: 0 vm.lz4_profitable_bytes: 0 vm.lz4_run_continue_bytes: 0 vm.lz4_run_preselection_threshold: -1 vm.lz4_threshold: 12288 vm.lz4_wk_compression_delta: 0 vm.lz4_wk_compression_negative_delta: 0 vm.swapfileprefix: /System/Volumes/VM/swapfile vm.uc_decompressions: 0 vm.user_wire_limit: 6270652252 vm.vm_copy_src_large: 0 vm.vm_copy_src_not_internal: 12 vm.vm_copy_src_not_symmetric: 2 vm.vm_page_background_count: 10794 vm.vm_page_background_exclude_external: 0 vm.vm_page_background_external_count: 3297 vm.vm_page_background_internal_count: 7497 vm.vm_page_background_mode: 1 vm.vm_page_background_promoted_count: 1475540 vm.vm_page_background_target: 19318 vm.vm_page_external_count: 68880 vm.vm_page_filecache_min: 89352 vm.vm_page_xpmapped_min: 19261 vm.vm_pageout_considered_bq_external: 13537933 vm.vm_pageout_considered_bq_internal: 55747640 vm.vm_pageout_rejected_bq_external: 0 vm.vm_pageout_rejected_bq_internal: 0 vm.vm_ripe_target_age_in_secs: 172800 vm.wk_catime: 0 vm.wk_compressed_bytes_exclusive: 0 vm.wk_compressed_bytes_total: 0 vm.wk_compression_failures: 0 vm.wk_compressions: 0 vm.wk_compressions_exclusive: 0 vm.wk_datime: 0 vm.wk_decompressed_bytes: 0 vm.wk_decompressions: 0 vm.wk_mzv_compressions: 0 vm.wk_sv_compressions: 0 vm.wk_sv_decompressions: 0 vm.wkdm_reeval_threshold: 1536 vm.wkh_catime: 0 vm.wkh_compressions: 0 vm.wkh_datime: 0 vm.wkh_decompressions: 0 vm.wks_catime: 0 vm.wks_compressed_bytes: 0 vm.wks_compression_failures: 0 vm.wks_compressions: 0 vm.wks_datime: 0 vm.wks_decompressions: 0 vm.wks_sv_compressions: 0 vm.cs_blob_count: 733 vm.cs_blob_count_peak: 1038 vm.cs_blob_size: 64632805 vm.cs_blob_size_max: 20496384 vm.cs_blob_size_peak: 71221447 vm.all_reusable_calls: 0 vm.all_reuse_calls: 0 vm.apple_protect_pager_cache_limit: 20 vm.apple_protect_pager_count: 0 vm.apple_protect_pager_count_mapped: 0 vm.can_reuse_failure: 219 vm.can_reuse_success: 801 vm.copied_on_read: 17 vm.corpse_footprint_count: 64 vm.corpse_footprint_full: 0 vm.corpse_footprint_no_buf: 0 vm.corpse_footprint_size_avg: 49965 vm.corpse_footprint_size_max: 61632 vm.cs_defer_to_pmap_cs: 0 vm.cs_defer_to_pmap_cs_not: 6865155 vm.cs_executable_create_upl: 0 vm.cs_executable_wire: 0 vm.free_shared: 47 vm.iopl_pages_tainted: 0 vm.kern_lpage_count: 0 vm.madvise_free_debug: 0 vm.map_lookup_locked_copy_shadow_count: 688756 vm.map_lookup_locked_copy_shadow_max: 236814336 vm.map_lookup_locked_copy_shadow_size: 16123246313472 vm.map_lookup_locked_copy_slowly_count: 0 vm.map_lookup_locked_copy_slowly_error: 0 vm.map_lookup_locked_copy_slowly_max: 0 vm.map_lookup_locked_copy_slowly_restart: 0 vm.map_lookup_locked_copy_slowly_size: 0 vm.map_lookup_locked_copy_strategically_count: 129 vm.map_lookup_locked_copy_strategically_error: 0 vm.map_lookup_locked_copy_strategically_max: 33554432 vm.map_lookup_locked_copy_strategically_restart: 0 vm.map_lookup_locked_copy_strategically_size: 4328521728 vm.memory_pressure: 0 vm.page_busy_absent_skipped: 0 vm.page_cleaned_count: 2 vm.page_free_count: 5430 vm.page_free_wanted: 0 vm.page_pageable_external_count: 67819 vm.page_pageable_internal_count: 171520 vm.page_purgeable_count: 2536 vm.page_purgeable_wired_count: 0 vm.page_reusable_count: 8283 vm.page_speculative_count: 1771 vm.pageout_freed_cleaned: 523360 vm.pageout_freed_external: 19347435 vm.pageout_freed_speculative: 34154161 vm.pageout_inactive_clean: 97933574 vm.pageout_inactive_dirty_external: 400319 vm.pageout_inactive_dirty_internal: 797342315 vm.pageout_inactive_used: 582829418 vm.pageout_speculative_clean: 34154161 vm.pages: 470894 vm.pagesize: 16384 vm.partial_reusable_calls: 119206104 vm.partial_reuse_calls: 15839908 vm.prefault_nb_bailout: 0 vm.prefault_nb_pages: 233791 vm.protect_privileged_from_untrusted: 1 vm.retired_pages_count: 0 vm.reusable_failure: 2355279 vm.reusable_nonwritable: 122758 vm.reusable_pages_shared: 3328300 vm.reusable_reclaimed: 0 vm.reusable_shared: 14694261 vm.reusable_success: 118692168 vm.reuse_failure: 0 vm.reuse_success: 9152434 vm.shared_region_count: 2 vm.shared_region_destroy_delay: 120 vm.shared_region_pager_copied: 0 vm.shared_region_pager_reclaimed: 927989 vm.shared_region_pager_slid: 3811238 vm.shared_region_pager_slid_error: 0 vm.shared_region_peak: 2 vm.shared_region_persistence: 0 vm.shared_region_pivot: 0 vm.shared_region_unnest_logging: 1 vm.shared_region_version: 3 vm.upl_pages_tainted: 0 vm.vm_create_upl_extra_cow: 10149 vm.vm_create_upl_extra_cow_pages: 4495271 vm.vm_create_upl_lookup_failure_copy: 0 vm.vm_create_upl_lookup_failure_write: 0 vm.vm_debug_events: 0 vm.vm_do_collapse_compressor: 24593 vm.vm_do_collapse_compressor_pages: 16152 vm.vm_do_collapse_terminate: 24594 vm.vm_do_collapse_terminate_failure: 0 vm.vm_max_kernel_address: 18446742493161586687 vm.vm_min_kernel_address: 18446741874686296064 vm.vm_page_free_target: 4000 vm.vm_should_cow_but_wired: 0 vm.vmtc_128byte: 0 vm.vmtc_16_byte: 0 vm.vmtc_1_byte: 0 vm.vmtc_256_byte: 0 vm.vmtc_2_byte: 0 vm.vmtc_32_byte: 0 vm.vmtc_4_byte: 0 vm.vmtc_64_byte: 0 vm.vmtc_8_byte: 0 vm.vmtc_copyin_fail: 0 vm.vmtc_not_eligible: 0 vm.vmtc_not_found: 0 vm.vmtc_one_bit_flip: 0 vm.vmtc_total: 0 vm.vmtc_undiagnosed: 0 vm.shared_region_trace_level: 1 vm.cs_all_vnodes: 0 vm.cs_debug: 0 vm.cs_debug_fail_on_unsigned_code: 0 vm.cs_debug_unsigned_exec_failures: 0 vm.cs_debug_unsigned_mmap_failures: 0 vm.cs_enforcement_panic: 0 vm.cs_force_hard: 0 vm.cs_force_kill: 0 vm.cs_library_validation: 0 vm.cs_process_enforcement: 0 vm.cs_system_enforcement: 1 vfs.generic.maxtypenum: 28 vfs.generic.nfs.server.async: 0 vfs.generic.nfs.server.export_hash_size: 64 vfs.generic.nfs.server.fsevents: 1 vfs.generic.nfs.server.gss_context_ttl: 28800 vfs.generic.nfs.server.nfsd_sock_idle_timeout: 3600 vfs.generic.nfs.server.nfsd_tcp_connections: 0 vfs.generic.nfs.server.nfsd_thread_count: 0 vfs.generic.nfs.server.nfsd_thread_max: 0 vfs.generic.nfs.server.reqcache_size: 64 vfs.generic.nfs.server.request_queue_length: 128 vfs.generic.nfs.server.require_resv_port: 0 vfs.generic.nfs.server.upcall_queue_count: 0 vfs.generic.nfs.server.upcall_queue_limit: 0 vfs.generic.nfs.server.upcall_queue_max_seen: 0 vfs.generic.nfs.server.use_upcall_svc: 1 vfs.generic.nfs.server.user_stats: 1 vfs.generic.nfs.server.wg_delay: 1000 vfs.generic.nfs.server.wg_delay_v3: 0 vfs.generic.nfs.client.access_cache_timeout: 60 vfs.generic.nfs.client.access_delete: 1 vfs.generic.nfs.client.access_dotzfs: 1 vfs.generic.nfs.client.access_for_getattr: 0 vfs.generic.nfs.client.allow_async: 0 vfs.generic.nfs.client.callback_port: 0 vfs.generic.nfs.client.debug_ctl: 0 vfs.generic.nfs.client.default_nfs4domain: vfs.generic.nfs.client.idmap_ctrl: 1 vfs.generic.nfs.client.initialdowndelay: 5 vfs.generic.nfs.client.iosize: 1048576 vfs.generic.nfs.client.is_mobile: 1 vfs.generic.nfs.client.lockd_mounts: 0 vfs.generic.nfs.client.max_async_writes: 128 vfs.generic.nfs.client.nextdowndelay: 30 vfs.generic.nfs.client.nfsiod_thread_count: 0 vfs.generic.nfs.client.nfsiod_thread_max: 16 vfs.generic.nfs.client.readlink_nocache: 0 vfs.generic.nfs.client.root_steals_gss_context: 0 vfs.generic.nfs.client.squishy_flags: 11 vfs.generic.nfs.client.statfs_rate_limit: 10 vfs.generic.nfs.client.tcp_sockbuf: 131072 vfs.generic.root_unmounted_cleanly: 0 vfs.generic.sync_timeout: 5 vfs.generic.hfs.kdebug.allocation: 0 vfs.generic.hfs.jnl.trim_flush: 240 vfs.generic.hfs.jnl.kdebug.trim: 0 vfs.generic.hfs.allocated: 0 vfs.generic.always_do_fullfsync: 0 vfs.generic.apfs.fusion_rc_promotion_size_limit_mb: 4096 vfs.generic.apfs.fusion_rc_flags: 0 vfs.generic.apfs.fusion_w2rc_filled_ratio_threshold: 50 vfs.generic.apfs.fusion_lc_rc_promotion_threshold_mult: 8 vfs.generic.apfs.fusion_rc_promotion_threshold_mult: 4 vfs.generic.apfs.fusion_wbc_buffersize: 16777216 vfs.generic.apfs.fusion_verbosity_flags: 0 vfs.generic.apfs.fusion_paranoia_level: 0 vfs.generic.apfs.fusion_swapfile_backoff: 4 vfs.generic.apfs.fusion_slow_io_threshold: 10240 vfs.generic.apfs.fusion_elevator_throttle: 100 vfs.generic.apfs.fusion_promoter_throttle: 100 vfs.generic.apfs.fusion_promoter_queue_limit: 1000 vfs.generic.apfs.fusion_wbc_elevator_wmk: 0 vfs.generic.apfs.fusion_wbc_backoff_wmk_reenable: 25 vfs.generic.apfs.fusion_wbc_backoff_wmk_med: 95 vfs.generic.apfs.fusion_wbc_backoff_wmk_low: 60 vfs.generic.apfs.allocated: 110779629 vfs.generic.autofs.vnode_recycle_on_inactive: 1 vfs.nummntops: 133 vfs.nspace.prevent_materialization: 0 vfs.nspace.resolver: 0 vfs.nspace.thread_prevent_materialization: 0 net.local.stream.recvspace: 8192 net.local.stream.sendspace: 8192 net.local.stream.tracemdns: 0 net.local.dgram.maxdgram: 2048 net.local.dgram.recvspace: 4096 net.local.inflight: 0 net.inet.ip.portrange.first: 49152 net.inet.ip.portrange.hifirst: 49152 net.inet.ip.portrange.hilast: 65535 net.inet.ip.portrange.ipport_allow_udp_port_exhaustion: 0 net.inet.ip.portrange.last: 65535 net.inet.ip.portrange.lowfirst: 1023 net.inet.ip.portrange.lowlast: 600 net.inet.ip.forwarding: 0 net.inet.ip.redirect: 1 net.inet.ip.ttl: 64 net.inet.ip.rtexpire: 10 net.inet.ip.rtminexpire: 10 net.inet.ip.rtmaxcache: 128 net.inet.ip.sourceroute: 0 net.inet.ip.accept_sourceroute: 0 net.inet.ip.gifttl: 30 net.inet.ip.linklocal.in.allowbadttl: 1 net.inet.ip.mcast.loop: 1 net.inet.ip.mcast.maxgrpsrc: 512 net.inet.ip.mcast.maxsocksrc: 128 net.inet.ip.dummynet.curr_time: 0 net.inet.ip.dummynet.debug: 0 net.inet.ip.dummynet.expire: 1 net.inet.ip.dummynet.extract_heap: 0 net.inet.ip.dummynet.hash_size: 64 net.inet.ip.dummynet.max_chain_len: 16 net.inet.ip.dummynet.ready_heap: 0 net.inet.ip.dummynet.red_avg_pkt_size: 512 net.inet.ip.dummynet.red_lookup_depth: 256 net.inet.ip.dummynet.red_max_pkt_size: 1500 net.inet.ip.dummynet.search_steps: 0 net.inet.ip.dummynet.searches: 0 net.inet.ip.subnets_are_local: 0 net.inet.ip.random_id_collisions: 0 net.inet.ip.random_id_statistics: 0 net.inet.ip.random_id_total: 0 net.inet.ip.adj_clear_hwcksum: 0 net.inet.ip.adj_partial_sum: 1 net.inet.ip.check_interface: 1 net.inet.ip.checkinterface_debug: 0 net.inet.ip.fragpackets: 0 net.inet.ip.maxfragpackets: 2048 net.inet.ip.maxfragsperpacket: 128 net.inet.ip.random_id: 1 net.inet.ip.rx_chaining: 1 net.inet.ip.rx_chainsz: 6 net.inet.ip.sendsourcequench: 0 net.inet.ip.maxchainsent: 49 net.inet.ip.output_perf: 0 net.inet.ip.output_perf_bins: 0 net.inet.ip.rfc6864: 1 net.inet.ip.select_srcif_debug: 0 net.inet.icmp.maskrepl: 0 net.inet.icmp.icmplim: 250 net.inet.icmp.timestamp: 0 net.inet.icmp.icmplim_random_incr: 250 net.inet.icmp.bmcastecho: 1 net.inet.icmp.drop_redirect: 1 net.inet.icmp.log_redirect: 0 net.inet.igmp.debug: 0 net.inet.igmp.default_version: 3 net.inet.igmp.gsrdelay: 10 net.inet.igmp.legacysupp: 0 net.inet.igmp.recvifkludge: 1 net.inet.igmp.sendlocal: 1 net.inet.igmp.sendra: 1 net.inet.igmp.v1enable: 1 net.inet.igmp.v2enable: 1 net.inet.tcp.mssdflt: 512 net.inet.tcp.keepidle: 7200000 net.inet.tcp.keepintvl: 75000 net.inet.tcp.sendspace: 131072 net.inet.tcp.recvspace: 131072 net.inet.tcp.keepinit: 75000 net.inet.tcp.v6mssdflt: 1024 net.inet.tcp.log.enable: 0 net.inet.tcp.log.enable_usage: connection:0x1 rtt:0x2 ka:0x4 loop:0x10 local:0x20 gw:0x40 syn:0x100 fin:0x200 rst:0x400 dropnecp:0x1000 droppcb:0x2000 droppkt:0x4000 fswflow:0x8000 net.inet.tcp.log.level_info: 0 net.inet.tcp.log.privacy: 1 net.inet.tcp.log.rate_current: 0 net.inet.tcp.log.rate_duration: 60 net.inet.tcp.log.rate_exceeded_total: 0 net.inet.tcp.log.rate_limit: 600 net.inet.tcp.log.rate_max: 0 net.inet.tcp.log.rtt_port: 0 net.inet.tcp.log.thflags_if_family: 0 net.inet.tcp.reass.overflows: 0 net.inet.tcp.backoff_maximum: 65536 net.inet.tcp.clear_tfocache: 0 net.inet.tcp.disable_tcp_heuristics: 0 net.inet.tcp.ecn_timeout: 60 net.inet.tcp.ack_strategy: 1 net.inet.tcp.aggressive_rcvwnd_inc: 1 net.inet.tcp.autorcvbufmax: 4194304 net.inet.tcp.autotunereorder: 1 net.inet.tcp.blackhole: 0 net.inet.tcp.challengeack_limit: 10 net.inet.tcp.delayed_ack: 3 net.inet.tcp.disable_access_to_stats: 1 net.inet.tcp.do_better_lr: 1 net.inet.tcp.do_rfc5961: 1 net.inet.tcp.doautorcvbuf: 1 net.inet.tcp.drop_synfin: 1 net.inet.tcp.flow_control_response: 1 net.inet.tcp.log_in_vain: 0 net.inet.tcp.maxseg_unacked: 8 net.inet.tcp.rcvsspktcnt: 512 net.inet.tcp.recv_allowed_iaj: 5 net.inet.tcp.recvbg: 0 net.inet.tcp.rexmt_thresh: 3 net.inet.tcp.rfc3465: 1 net.inet.tcp.rfc3465_lim2: 1 net.inet.tcp.slowlink_wsize: 8192 net.inet.tcp.acc_iaj_react_limit: 200 net.inet.tcp.ack_compression_rate: 5 net.inet.tcp.autosndbufinc: 8192 net.inet.tcp.autosndbufmax: 4194304 net.inet.tcp.do_ack_compression: 1 net.inet.tcp.ecn_initiate_out: 2 net.inet.tcp.ecn_negotiate_in: 2 net.inet.tcp.ecn_setup_percentage: 100 net.inet.tcp.enable_tlp: 1 net.inet.tcp.local_slowstart_flightsize: 8 net.inet.tcp.min_iaj_win: 16 net.inet.tcp.packetchain: 50 net.inet.tcp.path_mtu_discovery: 1 net.inet.tcp.randomize_timestamps: 1 net.inet.tcp.recv_throttle_minwin: 16384 net.inet.tcp.rtt_recvbg: 1 net.inet.tcp.socket_unlocked_on_output: 1 net.inet.tcp.tso: 1 net.inet.tcp.sack: 1 net.inet.tcp.sack_globalholes: 0 net.inet.tcp.sack_globalmaxholes: 65536 net.inet.tcp.sack_maxholes: 128 net.inet.tcp.fastopen: 3 net.inet.tcp.fastopen_backlog: 10 net.inet.tcp.icmp_may_rst: 1 net.inet.tcp.init_rtt_from_cache: 1 net.inet.tcp.microuptime_init: 6508067 net.inet.tcp.minmss: 216 net.inet.tcp.now_init: 647737810 net.inet.tcp.pcbcount: 194 net.inet.tcp.randomize_ports: 0 net.inet.tcp.rexmt_slop: 200 net.inet.tcp.rtt_min: 100 net.inet.tcp.tcbhashsize: 4096 net.inet.tcp.tso_debug: 0 net.inet.tcp.tw_pcbcount: 0 net.inet.tcp.win_scale_factor: 3 net.inet.tcp.always_keepalive: 0 net.inet.tcp.broken_peer_syn_rexmit_thres: 10 net.inet.tcp.keepcnt: 8 net.inet.tcp.max_persist_timeout: 0 net.inet.tcp.msl: 15000 net.inet.tcp.pmtud_blackhole_detection: 1 net.inet.tcp.pmtud_blackhole_mss: 1200 net.inet.tcp.tcp_resched_timerlist: 800699 net.inet.tcp.tcp_timer_advanced: 1945 net.inet.tcp.timer_fastmode_idlemax: 10 net.inet.tcp.background_sockets: 0 net.inet.tcp.cc_debug: 0 net.inet.tcp.cubic_sockets: 191 net.inet.tcp.newreno_sockets: 0 net.inet.tcp.use_newreno: 0 net.inet.tcp.cubic_fast_convergence: 0 net.inet.tcp.cubic_minor_fixes: 1 net.inet.tcp.cubic_rfc_compliant: 1 net.inet.tcp.cubic_tcp_friendliness: 0 net.inet.tcp.cubic_use_minrtt: 0 net.inet.tcp.bg_allowed_increase: 8 net.inet.tcp.bg_ss_fltsz: 2 net.inet.tcp.bg_target_qdelay: 100 net.inet.tcp.bg_tether_shift: 1 net.inet.udp.checksum: 1 net.inet.udp.maxdgram: 9216 net.inet.udp.recvspace: 786896 net.inet.udp.blackhole: 0 net.inet.udp.log_in_vain: 0 net.inet.udp.pcbcount: 67 net.inet.udp.randomize_ports: 1 net.inet.ipsec.def_policy: 1 net.inet.ipsec.esp_trans_deflev: 1 net.inet.ipsec.esp_net_deflev: 1 net.inet.ipsec.ah_trans_deflev: 1 net.inet.ipsec.ah_net_deflev: 1 net.inet.ipsec.ah_cleartos: 1 net.inet.ipsec.ah_offsetmask: 0 net.inet.ipsec.dfbit: 0 net.inet.ipsec.ecn: 0 net.inet.ipsec.debug: 0 net.inet.ipsec.esp_randpad: -1 net.inet.ipsec.bypass: 1 net.inet.ipsec.esp_port: 0 net.inet.mptcp.dss_csum: 0 net.inet.mptcp.enable: 1 net.inet.mptcp.fail: 1 net.inet.mptcp.keepalive: 840 net.inet.mptcp.mptcp_cap_retr: 4 net.inet.mptcp.probecnt: 5 net.inet.mptcp.probeto: 1000 net.inet.mptcp.rto_thresh: 1500 net.inet.mptcp.rtthist_thresh: 600 net.inet.mptcp.alternate_port: 0 net.inet.mptcp.dbg_area: 31 net.inet.mptcp.dbg_level: 1 net.inet.mptcp.pcbcount: 0 net.inet.mptcp.allow_aggregate: 0 net.inet.mptcp.expected_progress_headstart: 5000 net.inet.mptcp.no_first_party: 0 net.inet.mptcp.nrto: 3 net.inet.mptcp.rto: 3 net.inet.mptcp.tw: 60 net.inet.raw.maxdgram: 8192 net.inet.raw.pcbcount: 1 net.inet.raw.recvspace: 8192 net.inet.log_restricted: 0 net.link.generic.system.ifcount: 18 net.link.generic.system.port_used.entry_count: 0 net.link.generic.system.port_used.entry_gen: 123 net.link.generic.system.port_used.verbose: 0 net.link.generic.system.port_used.wakeuuid_not_set_count: 32 net.link.generic.system.port_used.wakeuuid_not_set_last_if: awdl0 net.link.generic.system.port_used.wakeuuid_not_set_last_time: { sec = 1646662449, usec = 34628 } Mon Mar 7 14:14:09 2022 net.link.generic.system.if_verbose: 0 net.link.generic.system.delaybased_queue: 1 net.link.generic.system.dlil_input_sanity_check: 0 net.link.generic.system.dlil_input_threads: 16 net.link.generic.system.dlil_verbose: 0 net.link.generic.system.enable_netagent: 0 net.link.generic.system.flow_advisory: 1 net.link.generic.system.hwcksum_dbg: 0 net.link.generic.system.hwcksum_dbg_adjusted: 0 net.link.generic.system.hwcksum_dbg_bad_cksum: 0 net.link.generic.system.hwcksum_dbg_bad_rxoff: 0 net.link.generic.system.hwcksum_dbg_finalized_data: 0 net.link.generic.system.hwcksum_dbg_finalized_hdr: 0 net.link.generic.system.hwcksum_dbg_mode: 0 net.link.generic.system.hwcksum_dbg_partial_forced: 0 net.link.generic.system.hwcksum_dbg_partial_forced_bytes: 0 net.link.generic.system.hwcksum_dbg_partial_rxoff_adj: 0 net.link.generic.system.hwcksum_dbg_partial_rxoff_forced: 0 net.link.generic.system.hwcksum_dbg_verified: 0 net.link.generic.system.hwcksum_in_invalidated: 0 net.link.generic.system.hwcksum_rx: 1 net.link.generic.system.hwcksum_tx: 1 net.link.generic.system.rcvq_maxlen: 256 net.link.generic.system.rxpoll: 1 net.link.generic.system.rxpoll_decay: 2 net.link.generic.system.rxpoll_freeze_time: 1000000000 net.link.generic.system.rxpoll_interval_pkts: 0 net.link.generic.system.rxpoll_interval_time: 1000000 net.link.generic.system.rxpoll_max: 0 net.link.generic.system.rxpoll_sample_time: 10000000 net.link.generic.system.rxpoll_wakeups_hiwat: 100 net.link.generic.system.rxpoll_wakeups_lowat: 10 net.link.generic.system.sndq_maxlen: 128 net.link.generic.system.start_delay_disabled: 0 net.link.generic.system.start_delayed: 0 net.link.generic.system.threshold_interval: 2 net.link.generic.system.threshold_notify: 1 net.link.generic.system.tx_chain_len_count: 0 net.link.ether.inet.arp_llreach_base: 120 net.link.ether.inet.arp_unicast_lim: 3 net.link.ether.inet.host_down_time: 20 net.link.ether.inet.keep_announcements: 1 net.link.ether.inet.log_arp_warnings: 0 net.link.ether.inet.max_age: 1200 net.link.ether.inet.maxhold: 16 net.link.ether.inet.maxhold_total: 1024 net.link.ether.inet.maxtries: 5 net.link.ether.inet.probe_intvl: 7 net.link.ether.inet.proxyall: 0 net.link.ether.inet.prune_intvl: 300 net.link.ether.inet.send_conflicting_probes: 1 net.link.ether.inet.sendllconflict: 0 net.link.ether.inet.useloopback: 1 net.link.ether.inet.verbose: 0 net.link.bridge.debug: 0 net.link.bridge.inherit_mac: 0 net.link.bridge.rtable_hash_size_max: 2048 net.link.bridge.rtable_prune_period: 300 net.link.bridge.segmentation: 1 net.link.bridge.txstart: 0 net.link.pktap.count_unknown_if_type: 0 net.link.pktap.log: 0 net.link.pktap.total_tap_count: 0 net.link.fake.bsd_mode: 1 net.link.fake.buflet_size: 512 net.link.fake.debug: 0 net.link.fake.fcs: 0 net.link.fake.hwcsum: 0 net.link.fake.if_adv_intvl: 0 net.link.fake.link_layer_aggregation_factor: 32 net.link.fake.max_mtu: 2048 net.link.fake.multibuflet: 0 net.link.fake.nxattach: 0 net.link.fake.pktpool_mode: 0 net.link.fake.trailer_length: 0 net.link.fake.tx_drops: 0 net.link.fake.tx_headroom: 32 net.link.fake.txstart: 1 net.link.fake.user_access: 0 net.link.fake.wmm_mode: 0 net.link.loopback.dequeue_sc: 0 net.link.loopback.max_dequeue: 256 net.link.loopback.sched_model: 0 net.link.iptap.log: 0 net.link.iptap.total_tap_count: 0 net.link.bond.debug: 0 net.key.debug: 0 net.key.spi_trycnt: 1000 net.key.spi_minval: 256 net.key.spi_maxval: 268435455 net.key.int_random: 60 net.key.larval_lifetime: 30 net.key.blockacq_count: 10 net.key.blockacq_lifetime: 20 net.key.esp_keymin: 256 net.key.esp_auth: 0 net.key.ah_keymin: 128 net.key.prefered_oldsa: 0 net.key.natt_keepalive_interval: 20 net.inet6.ip6.forwarding: 0 net.inet6.ip6.redirect: 1 net.inet6.ip6.hlim: 64 net.inet6.ip6.maxfragpackets: 2048 net.inet6.ip6.accept_rtadv: 1 net.inet6.ip6.keepfaith: 0 net.inet6.ip6.log_interval: 5 net.inet6.ip6.hdrnestlimit: 15 net.inet6.ip6.dad_count: 1 net.inet6.ip6.auto_flowlabel: 1 net.inet6.ip6.defmcasthlim: 1 net.inet6.ip6.gifhlim: 0 net.inet6.ip6.kame_version: 2009/apple-darwin net.inet6.ip6.use_deprecated: 1 net.inet6.ip6.rr_prune: 5 net.inet6.ip6.v6only: 0 net.inet6.ip6.rtexpire: 10 net.inet6.ip6.rtminexpire: 10 net.inet6.ip6.rtmaxcache: 128 net.inet6.ip6.use_tempaddr: 1 net.inet6.ip6.temppltime: 86400 net.inet6.ip6.tempvltime: 604800 net.inet6.ip6.auto_linklocal: 1 net.inet6.ip6.prefer_tempaddr: 1 net.inet6.ip6.use_defaultzone: 0 net.inet6.ip6.maxfrags: 4096 net.inet6.ip6.mcast_pmtu: 0 net.inet6.ip6.neighborgcthresh: 1024 net.inet6.ip6.maxifprefixes: 16 net.inet6.ip6.maxifdefrouters: 64 net.inet6.ip6.maxdynroutes: 1024 net.inet6.ip6.ula_use_tempaddr: 0 net.inet6.ip6.mcast.loop: 1 net.inet6.ip6.mcast.maxgrpsrc: 512 net.inet6.ip6.mcast.maxsocksrc: 128 net.inet6.ip6.fragpackets: 0 net.inet6.ip6.adj_clear_hwcksum: 0 net.inet6.ip6.adj_partial_sum: 1 net.inet6.ip6.check_interface: 1 net.inet6.ip6.checkinterface_debug: 0 net.inet6.ip6.input_perf: 0 net.inet6.ip6.input_perf_bins: 0 net.inet6.ip6.output_perf: 0 net.inet6.ip6.output_perf_bins: 0 net.inet6.ip6.select_src_expensive_secondary_if: 0 net.inet6.ip6.select_src_strong_end: 1 net.inet6.ip6.select_srcaddr_debug: 0 net.inet6.ip6.select_srcif_debug: 0 net.inet6.ip6.cga_conflict_retries: 3 net.inet6.ip6.clat_debug: 0 net.inet6.ip6.compliance_profile: 0 net.inet6.ip6.only_allow_rfc4193_prefixes: 0 net.inet6.ip6.maxchainsent: 50 net.inet6.ip6.dad_enhanced: 1 net.inet6.ipsec6.def_policy: 1 net.inet6.ipsec6.esp_trans_deflev: 1 net.inet6.ipsec6.esp_net_deflev: 1 net.inet6.ipsec6.ah_trans_deflev: 1 net.inet6.ipsec6.ah_net_deflev: 1 net.inet6.ipsec6.ecn: 0 net.inet6.ipsec6.debug: 0 net.inet6.ipsec6.esp_randpad: -1 net.inet6.icmp6.rediraccept: 1 net.inet6.icmp6.redirtimeout: 600 net.inet6.icmp6.nd6_prune: 1 net.inet6.icmp6.nd6_delay: 5 net.inet6.icmp6.nd6_umaxtries: 3 net.inet6.icmp6.nd6_mmaxtries: 3 net.inet6.icmp6.nd6_useloopback: 1 net.inet6.icmp6.nodeinfo: 0 net.inet6.icmp6.errppslimit: 549 net.inet6.icmp6.nd6_debug: 0 net.inet6.icmp6.nd6_accept_6to4: 1 net.inet6.icmp6.nd6_optimistic_dad: 63 net.inet6.icmp6.errppslimit_random_incr: 500 net.inet6.icmp6.nd6_onlink_ns_rfc4861: 0 net.inet6.icmp6.nd6_prune_lazy: 5 net.inet6.icmp6.rappslimit: 10 net.inet6.icmp6.nd6_process_rti: 1 net.inet6.icmp6.nd6_llreach_base: 30 net.inet6.icmp6.nd6_maxproxiedsol: 4 net.inet6.icmp6.nd6_maxsolstgt: 8 net.inet6.icmp6.prproxy_cnt: 0 net.inet6.mld.debug: 0 net.inet6.mld.gsrdelay: 10 net.inet6.mld.use_allow: 1 net.inet6.mld.v1enable: 1 net.inet6.mld.v2enable: 1 net.inet6.send.opmode: 1 net.inet6.send.opstate: 1 net.systm.kctl.autorcvbufhigh: 163840 net.systm.kctl.autorcvbufmax: 262144 net.systm.kctl.debug: 0 net.ppp.l2tp.nb_threads: 0 net.ppp.l2tp.thread_outq_size: 1024 net.classq.sfb.allocation: 0 net.classq.sfb.decrement: 16 net.classq.sfb.hinterval: 0 net.classq.sfb.holdtime: 0 net.classq.sfb.increment: 82 net.classq.sfb.pboxtime: 0 net.classq.sfb.ratelimit: 0 net.classq.verbose: 0 net.classq.target_qdelay: 0 net.classq.update_interval: 0 net.vsock.recvspace: 524288 net.vsock.sendspace: 524288 net.utun.max_pending_input: 512 net.utun.ring_size: 64 net.utun.rx_fsw_ring_size: 128 net.utun.tx_fsw_ring_size: 64 net.netagent.active_count: 30 net.netagent.debug: 5 net.netagent.registered_count: 31 net.restricted_port.enforced: 1 net.restricted_port.verbose: 0 net.cfil.active_count: 0 net.cfil.close_wait_timeout: 1000 net.cfil.debug: 1 net.cfil.log: 3 net.cfil.sbtrim: 1 net.cfil.sock_attached_count: 0 net.pktsched.verbose: 0 net.stats.debug: 0 net.stats.recvspace: 8192 net.stats.sendspace: 2048 net.mpklog.enabled: 1 net.mpklog.type: 0 net.mpklog.version: 1 net.ipsec.debug: 0 net.ipsec.max_pending_input: 512 net.ipsec.ring_size: 64 net.ipsec.rx_fsw_ring_size: 128 net.ipsec.tx_fsw_ring_size: 64 net.ipsec.verify_interface_creation: 0 net.necp.drop_all_level: 0 net.necp.debug: 0 net.necp.pass_loopback: 1 net.necp.pass_keepalives: 1 net.necp.socket_policy_count: 20 net.necp.socket_non_app_policy_count: 20 net.necp.ip_policy_count: 8 net.necp.session_count: 4 net.necp.client_fd_count: 61 net.necp.client_count: 67 net.necp.arena_count: 0 net.necp.nexus_flow_count: 0 net.necp.socket_flow_count: 6 net.necp.if_flow_count: 0 net.necp.observer_fd_count: 0 net.necp.observer_message_limit: 256 net.necp.sysctl_arena_count: 0 net.necp.drop_unentitled_level: 0 net.necp.pass_interpose: 1 net.necp.restrict_multicast: 1 net.necp.dedup_policies: 0 net.necp.drop_dest_debug: 0 net.qos.policy.capable_enabled: 0 net.qos.policy.restrict_avapps: 0 net.qos.policy.restricted: 0 net.qos.policy.wifi_enabled: 0 net.qos.reset_dscp_to_wifi_ac_map: 0 net.qos.verbose: 0 net.ndrv_multi_max_count: 1024 net.statistics_privcheck: 0 net.alf.loglevel: 55 net.alf.perm: 0 net.alf.defaultaction: 1 net.alf.mqcount: 0 net.smb.fs.version: 306000 net.smb.fs.loglevel: 0 net.smb.fs.kern_deadtimer: 60 net.smb.fs.kern_hard_deadtimer: 600 net.smb.fs.kern_soft_deadtimer: 30 net.smb.fs.tcpsndbuf: 8388608 net.smb.fs.tcprcvbuf: 8388608 net.smb.fs.maxwrite: 8388608 net.smb.fs.maxread: 8388608 net.smb.fs.maxsegreadsize: 8388608 net.smb.fs.maxsegwritesize: 8388608 debug.kextlog: 4083 debug.lowpri_throttle_max_iosize: 131072 debug.lowpri_throttle_enabled: 1 debug.lowpri_throttle_tier1_io_period_msecs: 40 debug.lowpri_throttle_tier1_io_period_ssd_msecs: 5 debug.lowpri_throttle_tier1_window_msecs: 25 debug.lowpri_throttle_tier2_io_period_msecs: 85 debug.lowpri_throttle_tier2_io_period_ssd_msecs: 15 debug.lowpri_throttle_tier2_window_msecs: 100 debug.lowpri_throttle_tier3_io_period_msecs: 20 debug.lowpri_throttle_tier3_io_period_ssd_msecs: 25 debug.lowpri_throttle_tier3_window_msecs: 100 debug.bpf_bufsize: 4096 debug.bpf_debug: 0 debug.bpf_maxbufsize: 524288 debug.bpf_maxdevices: 256 debug.bpf_wantpktap: 0 debug.sched: 2 debug.toggle_address_reuse: 0 debug.iokit: 8388608 debug.iotrace: 0 debug.noidle: 0 debug.swd_panic: 1 debug.swd_timeout: 0 debug.swd_wake_timeout: 0 debug.swd_sleep_timeout: 0 debug.didevice_trace: 0 debug.didevice_bounce_count: 0 debug.didevice_no_bounce_count: 0 debug.didevice_cache_fully_satisfied: 0 debug.didevice_cache_spared_bytes: 0 debug.didevice_queue_depth: 0 debug.didevice_cache_size_default: 33554432 debug.didevice_enable_cache: 1 debug.didevice_read_by_kernel_bytes: 0 debug.didevice_write_by_kernel_bytes: 0 debug.mcc_debug: 2 debug.mcc_clampwaycount: -1 debug.batman: 3 debug.iogpu.wired_lwm_mb: 0 hw.ncpu: 8 hw.byteorder: 1234 hw.memsize: 8589934592 hw.activecpu: 8 hw.optional.amx_version: 2 hw.optional.arm64: 1 hw.optional.armv8_1_atomics: 1 hw.optional.armv8_2_fhm: 1 hw.optional.armv8_2_sha3: 1 hw.optional.armv8_2_sha512: 1 hw.optional.armv8_crc32: 1 hw.optional.breakpoint: 6 hw.optional.floatingpoint: 1 hw.optional.neon: 1 hw.optional.neon_fp16: 1 hw.optional.neon_hpfp: 1 hw.optional.ucnormal_mem: 1 hw.optional.watchpoint: 4 hw.cacheconfig: 8 1 1 0 0 0 0 0 0 0 hw.cachelinesize: 128 hw.cachesize: 3617718272 65536 4194304 0 0 0 0 0 0 0 hw.cpu64bit_capable: 1 hw.cpufamily: 458787763 hw.cpusubfamily: 2 hw.cpusubtype: 2 hw.cputype: 16777228 hw.ephemeral_storage: 0 hw.l1dcachesize: 65536 hw.l1icachesize: 131072 hw.l2cachesize: 4194304 hw.logicalcpu: 8 hw.logicalcpu_max: 8 hw.osenvironment: hw.packages: 1 hw.pagesize: 16384 hw.pagesize32: 16384 hw.physicalcpu: 8 hw.physicalcpu_max: 8 hw.serialdebugmode: 0 hw.tbfrequency: 24000000 hw.use_kernelmanagerd: 1 hw.use_recovery_securityd: 0 hw.targettype: J313 machdep.cpu.brand_string: Apple M1 machdep.cpu.core_count: 8 machdep.cpu.cores_per_package: 8 machdep.cpu.logical_per_package: 8 machdep.cpu.thread_count: 8 machdep.user_idle_level: 0 machdep.deferred_ipi_timeout: 64000 machdep.lck_mtx_adaptive_spin_mode: 1 machdep.time_since_reset: 349050836281 machdep.virtual_address_size: 47 machdep.wake_abstime: 15345477253179 machdep.wake_conttime: 48851161504410 security.mac.platform_exec_logging: 0 security.mac.device_enforce: 1 security.mac.labelvnodes: 1 security.mac.max_slots: 7 security.mac.pipe_enforce: 1 security.mac.posixsem_enforce: 1 security.mac.posixshm_enforce: 1 security.mac.proc_enforce: 1 security.mac.socket_enforce: 1 security.mac.system_enforce: 1 security.mac.sysvmsg_enforce: 1 security.mac.sysvsem_enforce: 1 security.mac.sysvshm_enforce: 1 security.mac.vm_enforce: 1 security.mac.vnode_enforce: 1 security.mac.vnode_label_count: 21813 security.mac.amfi.force_policy: 0 security.mac.amfi.verbose_logging: 0 security.mac.amfi.hsp_enable: 1 security.mac.amfi.allow_only_platform_code: 0 security.mac.amfi.platform_policy: 1 security.mac.amfi.unsigned_code_policy: 1 security.mac.amfi.forced_cs_kill: 1 security.mac.endpointsecurity.log_level: 1 security.mac.endpointsecurity.panic_on_soft_fail: 0 security.mac.sandbox.audio_active: 0 security.mac.sandbox.sentinel: .sb-cee0ec70 security.mac.qtn.sandbox_enforce: 1 security.mac.qtn.user_approved_exec: 1 security.mac.asp.active_rule_version: 10415043430518216312 security.mac.asp.logging_mode: 0 security.mac.asp.policy.change_scans: 1 security.mac.asp.policy.gatekeeper_enabled: 1 security.mac.asp.policy.strict_sip: 0 security.mac.asp.stats.cache_entry_count: 1690 security.mac.asp.stats.cache_allocation_count: 7522 security.mac.asp.stats.cache_release_count: 5832 security.mac.asp.stats.exec_hook_work_time: 5076383 security.mac.asp.stats.exec_hook_sleep_time: 160169370 security.mac.asp.stats.exec_hook_count: 1112913 security.mac.asp.stats.library_hook_time: 2676087 security.mac.asp.stats.library_sleep_time: 38897582 security.mac.asp.stats.library_hook_count: 2063200 security.mac.asp.stats.pending_evaluation_count: 0 audit.session.member_clear_sflags_mask: 16384 audit.session.member_set_sflags_mask: 0 audit.session.superuser_clear_sflags_mask: 24576 audit.session.superuser_set_sflags_mask: 24576 kperf.limits.timer_min_bg_period_ns: 1000000 kperf.limits.timer_min_bg_pet_period_ns: 10000000 kperf.limits.timer_min_period_ns: 50000 kperf.limits.timer_min_pet_period_ns: 2000000 kperf.debug_level: 0 ktrace.background_pid: 34343 ktrace.configured_by: tailspind ktrace.owning_pid: 34343 ktrace.state: 2 ============================================================================================= TESTING: checkCompilerMacros from config.compilerFlags(config/BuildSystem/config/compilerFlags.py:164) Save the list of CPP macros defined by the C and C++ compiler, does not work for all compilers Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags/conftest.c -E -dM stdout: #define _LP64 1 #define __AARCH64EL__ 1 #define __AARCH64_CMODEL_SMALL__ 1 #define __AARCH64_SIMD__ 1 #define __APPLE_CC__ 6000 #define __APPLE__ 1 #define __ARM64_ARCH_8__ 1 #define __ARM_64BIT_STATE 1 #define __ARM_ACLE 200 #define __ARM_ALIGN_MAX_STACK_PWR 4 #define __ARM_ARCH 8 #define __ARM_ARCH_8_3__ 1 #define __ARM_ARCH_ISA_A64 1 #define __ARM_ARCH_PROFILE 'A' #define __ARM_FEATURE_CLZ 1 #define __ARM_FEATURE_COMPLEX 1 #define __ARM_FEATURE_CRC32 1 #define __ARM_FEATURE_CRYPTO 1 #define __ARM_FEATURE_DIRECTED_ROUNDING 1 #define __ARM_FEATURE_DIV 1 #define __ARM_FEATURE_FMA 1 #define __ARM_FEATURE_FP16_SCALAR_ARITHMETIC 1 #define __ARM_FEATURE_FP16_VECTOR_ARITHMETIC 1 #define __ARM_FEATURE_IDIV 1 #define __ARM_FEATURE_JCVT 1 #define __ARM_FEATURE_LDREX 0xF #define __ARM_FEATURE_NUMERIC_MAXMIN 1 #define __ARM_FEATURE_QRDMX 1 #define __ARM_FEATURE_UNALIGNED 1 #define __ARM_FP 0xE #define __ARM_FP16_ARGS 1 #define __ARM_FP16_FORMAT_IEEE 1 #define __ARM_NEON 1 #define __ARM_NEON_FP 0xE #define __ARM_NEON__ 1 #define __ARM_PCS_AAPCS64 1 #define __ARM_SIZEOF_MINIMAL_ENUM 4 #define __ARM_SIZEOF_WCHAR_T 4 #define __ATOMIC_ACQUIRE 2 #define __ATOMIC_ACQ_REL 4 #define __ATOMIC_CONSUME 1 #define __ATOMIC_RELAXED 0 #define __ATOMIC_RELEASE 3 #define __ATOMIC_SEQ_CST 5 #define __BIGGEST_ALIGNMENT__ 8 #define __BLOCKS__ 1 #define __BYTE_ORDER__ __ORDER_LITTLE_ENDIAN__ #define __CHAR16_TYPE__ unsigned short #define __CHAR32_TYPE__ unsigned int #define __CHAR_BIT__ 8 #define __CLANG_ATOMIC_BOOL_LOCK_FREE 2 #define __CLANG_ATOMIC_CHAR16_T_LOCK_FREE 2 #define __CLANG_ATOMIC_CHAR32_T_LOCK_FREE 2 #define __CLANG_ATOMIC_CHAR_LOCK_FREE 2 #define __CLANG_ATOMIC_INT_LOCK_FREE 2 #define __CLANG_ATOMIC_LLONG_LOCK_FREE 2 #define __CLANG_ATOMIC_LONG_LOCK_FREE 2 #define __CLANG_ATOMIC_POINTER_LOCK_FREE 2 #define __CLANG_ATOMIC_SHORT_LOCK_FREE 2 #define __CLANG_ATOMIC_WCHAR_T_LOCK_FREE 2 #define __CONSTANT_CFSTRINGS__ 1 #define __DBL_DECIMAL_DIG__ 17 #define __DBL_DENORM_MIN__ 4.9406564584124654e-324 #define __DBL_DIG__ 15 #define __DBL_EPSILON__ 2.2204460492503131e-16 #define __DBL_HAS_DENORM__ 1 #define __DBL_HAS_INFINITY__ 1 #define __DBL_HAS_QUIET_NAN__ 1 #define __DBL_MANT_DIG__ 53 #define __DBL_MAX_10_EXP__ 308 #define __DBL_MAX_EXP__ 1024 #define __DBL_MAX__ 1.7976931348623157e+308 #define __DBL_MIN_10_EXP__ (-307) #define __DBL_MIN_EXP__ (-1021) #define __DBL_MIN__ 2.2250738585072014e-308 #define __DECIMAL_DIG__ __LDBL_DECIMAL_DIG__ #define __DYNAMIC__ 1 #define __ENVIRONMENT_MAC_OS_X_VERSION_MIN_REQUIRED__ 110000 #define __ENVIRONMENT_OS_VERSION_MIN_REQUIRED__ 110000 #define __FINITE_MATH_ONLY__ 0 #define __FLT16_DECIMAL_DIG__ 5 #define __FLT16_DENORM_MIN__ 5.9604644775390625e-8F16 #define __FLT16_DIG__ 3 #define __FLT16_EPSILON__ 9.765625e-4F16 #define __FLT16_HAS_DENORM__ 1 #define __FLT16_HAS_INFINITY__ 1 #define __FLT16_HAS_QUIET_NAN__ 1 #define __FLT16_MANT_DIG__ 11 #define __FLT16_MAX_10_EXP__ 4 #define __FLT16_MAX_EXP__ 16 #define __FLT16_MAX__ 6.5504e+4F16 #define __FLT16_MIN_10_EXP__ (-4) #define __FLT16_MIN_EXP__ (-13) #define __FLT16_MIN__ 6.103515625e-5F16 #define __FLT_DECIMAL_DIG__ 9 #define __FLT_DENORM_MIN__ 1.40129846e-45F #define __FLT_DIG__ 6 #define __FLT_EPSILON__ 1.19209290e-7F #define __FLT_EVAL_METHOD__ 0 #define __FLT_HAS_DENORM__ 1 #define __FLT_HAS_INFINITY__ 1 #define __FLT_HAS_QUIET_NAN__ 1 #define __FLT_MANT_DIG__ 24 #define __FLT_MAX_10_EXP__ 38 #define __FLT_MAX_EXP__ 128 #define __FLT_MAX__ 3.40282347e+38F #define __FLT_MIN_10_EXP__ (-37) #define __FLT_MIN_EXP__ (-125) #define __FLT_MIN__ 1.17549435e-38F #define __FLT_RADIX__ 2 #define __GCC_ATOMIC_BOOL_LOCK_FREE 2 #define __GCC_ATOMIC_CHAR16_T_LOCK_FREE 2 #define __GCC_ATOMIC_CHAR32_T_LOCK_FREE 2 #define __GCC_ATOMIC_CHAR_LOCK_FREE 2 #define __GCC_ATOMIC_INT_LOCK_FREE 2 #define __GCC_ATOMIC_LLONG_LOCK_FREE 2 #define __GCC_ATOMIC_LONG_LOCK_FREE 2 #define __GCC_ATOMIC_POINTER_LOCK_FREE 2 #define __GCC_ATOMIC_SHORT_LOCK_FREE 2 #define __GCC_ATOMIC_TEST_AND_SET_TRUEVAL 1 #define __GCC_ATOMIC_WCHAR_T_LOCK_FREE 2 #define __GCC_HAVE_SYNC_COMPARE_AND_SWAP_1 1 #define __GCC_HAVE_SYNC_COMPARE_AND_SWAP_2 1 #define __GCC_HAVE_SYNC_COMPARE_AND_SWAP_4 1 #define __GCC_HAVE_SYNC_COMPARE_AND_SWAP_8 1 #define __GNUC_MINOR__ 2 #define __GNUC_PATCHLEVEL__ 1 #define __GNUC_STDC_INLINE__ 1 #define __GNUC__ 4 #define __GXX_ABI_VERSION 1002 #define __INT16_C_SUFFIX__ #define __INT16_FMTd__ "hd" #define __INT16_FMTi__ "hi" #define __INT16_MAX__ 32767 #define __INT16_TYPE__ short #define __INT32_C_SUFFIX__ #define __INT32_FMTd__ "d" #define __INT32_FMTi__ "i" #define __INT32_MAX__ 2147483647 #define __INT32_TYPE__ int #define __INT64_C_SUFFIX__ LL #define __INT64_FMTd__ "lld" #define __INT64_FMTi__ "lli" #define __INT64_MAX__ 9223372036854775807LL #define __INT64_TYPE__ long long int #define __INT8_C_SUFFIX__ #define __INT8_FMTd__ "hhd" #define __INT8_FMTi__ "hhi" #define __INT8_MAX__ 127 #define __INT8_TYPE__ signed char #define __INTMAX_C_SUFFIX__ L #define __INTMAX_FMTd__ "ld" #define __INTMAX_FMTi__ "li" #define __INTMAX_MAX__ 9223372036854775807L #define __INTMAX_TYPE__ long int #define __INTMAX_WIDTH__ 64 #define __INTPTR_FMTd__ "ld" #define __INTPTR_FMTi__ "li" #define __INTPTR_MAX__ 9223372036854775807L #define __INTPTR_TYPE__ long int #define __INTPTR_WIDTH__ 64 #define __INT_FAST16_FMTd__ "hd" #define __INT_FAST16_FMTi__ "hi" #define __INT_FAST16_MAX__ 32767 #define __INT_FAST16_TYPE__ short #define __INT_FAST32_FMTd__ "d" #define __INT_FAST32_FMTi__ "i" #define __INT_FAST32_MAX__ 2147483647 #define __INT_FAST32_TYPE__ int #define __INT_FAST64_FMTd__ "lld" #define __INT_FAST64_FMTi__ "lli" #define __INT_FAST64_MAX__ 9223372036854775807LL #define __INT_FAST64_TYPE__ long long int #define __INT_FAST8_FMTd__ "hhd" #define __INT_FAST8_FMTi__ "hhi" #define __INT_FAST8_MAX__ 127 #define __INT_FAST8_TYPE__ signed char #define __INT_LEAST16_FMTd__ "hd" #define __INT_LEAST16_FMTi__ "hi" #define __INT_LEAST16_MAX__ 32767 #define __INT_LEAST16_TYPE__ short #define __INT_LEAST32_FMTd__ "d" #define __INT_LEAST32_FMTi__ "i" #define __INT_LEAST32_MAX__ 2147483647 #define __INT_LEAST32_TYPE__ int #define __INT_LEAST64_FMTd__ "lld" #define __INT_LEAST64_FMTi__ "lli" #define __INT_LEAST64_MAX__ 9223372036854775807LL #define __INT_LEAST64_TYPE__ long long int #define __INT_LEAST8_FMTd__ "hhd" #define __INT_LEAST8_FMTi__ "hhi" #define __INT_LEAST8_MAX__ 127 #define __INT_LEAST8_TYPE__ signed char #define __INT_MAX__ 2147483647 #define __LDBL_DECIMAL_DIG__ 17 #define __LDBL_DENORM_MIN__ 4.9406564584124654e-324L #define __LDBL_DIG__ 15 #define __LDBL_EPSILON__ 2.2204460492503131e-16L #define __LDBL_HAS_DENORM__ 1 #define __LDBL_HAS_INFINITY__ 1 #define __LDBL_HAS_QUIET_NAN__ 1 #define __LDBL_MANT_DIG__ 53 #define __LDBL_MAX_10_EXP__ 308 #define __LDBL_MAX_EXP__ 1024 #define __LDBL_MAX__ 1.7976931348623157e+308L #define __LDBL_MIN_10_EXP__ (-307) #define __LDBL_MIN_EXP__ (-1021) #define __LDBL_MIN__ 2.2250738585072014e-308L #define __LITTLE_ENDIAN__ 1 #define __LONG_LONG_MAX__ 9223372036854775807LL #define __LONG_MAX__ 9223372036854775807L #define __LP64__ 1 #define __MACH__ 1 #define __NO_INLINE__ 1 #define __OBJC_BOOL_IS_BOOL 1 #define __OPENCL_MEMORY_SCOPE_ALL_SVM_DEVICES 3 #define __OPENCL_MEMORY_SCOPE_DEVICE 2 #define __OPENCL_MEMORY_SCOPE_SUB_GROUP 4 #define __OPENCL_MEMORY_SCOPE_WORK_GROUP 1 #define __OPENCL_MEMORY_SCOPE_WORK_ITEM 0 #define __ORDER_BIG_ENDIAN__ 4321 #define __ORDER_LITTLE_ENDIAN__ 1234 #define __ORDER_PDP_ENDIAN__ 3412 #define __PIC__ 2 #define __POINTER_WIDTH__ 64 #define __PRAGMA_REDEFINE_EXTNAME 1 #define __PTRDIFF_FMTd__ "ld" #define __PTRDIFF_FMTi__ "li" #define __PTRDIFF_MAX__ 9223372036854775807L #define __PTRDIFF_TYPE__ long int #define __PTRDIFF_WIDTH__ 64 #define __REGISTER_PREFIX__ #define __SCHAR_MAX__ 127 #define __SHRT_MAX__ 32767 #define __SIG_ATOMIC_MAX__ 2147483647 #define __SIG_ATOMIC_WIDTH__ 32 #define __SIZEOF_DOUBLE__ 8 #define __SIZEOF_FLOAT__ 4 #define __SIZEOF_INT128__ 16 #define __SIZEOF_INT__ 4 #define __SIZEOF_LONG_DOUBLE__ 8 #define __SIZEOF_LONG_LONG__ 8 #define __SIZEOF_LONG__ 8 #define __SIZEOF_POINTER__ 8 #define __SIZEOF_PTRDIFF_T__ 8 #define __SIZEOF_SHORT__ 2 #define __SIZEOF_SIZE_T__ 8 #define __SIZEOF_WCHAR_T__ 4 #define __SIZEOF_WINT_T__ 4 #define __SIZE_FMTX__ "lX" #define __SIZE_FMTo__ "lo" #define __SIZE_FMTu__ "lu" #define __SIZE_FMTx__ "lx" #define __SIZE_MAX__ 18446744073709551615UL #define __SIZE_TYPE__ long unsigned int #define __SIZE_WIDTH__ 64 #define __SSP__ 1 #define __STDC_HOSTED__ 1 #define __STDC_NO_THREADS__ 1 #define __STDC_UTF_16__ 1 #define __STDC_UTF_32__ 1 #define __STDC_VERSION__ 201710L #define __STDC__ 1 #define __UINT16_C_SUFFIX__ #define __UINT16_FMTX__ "hX" #define __UINT16_FMTo__ "ho" #define __UINT16_FMTu__ "hu" #define __UINT16_FMTx__ "hx" #define __UINT16_MAX__ 65535 #define __UINT16_TYPE__ unsigned short #define __UINT32_C_SUFFIX__ U #define __UINT32_FMTX__ "X" #define __UINT32_FMTo__ "o" #define __UINT32_FMTu__ "u" #define __UINT32_FMTx__ "x" #define __UINT32_MAX__ 4294967295U #define __UINT32_TYPE__ unsigned int #define __UINT64_C_SUFFIX__ ULL #define __UINT64_FMTX__ "llX" #define __UINT64_FMTo__ "llo" #define __UINT64_FMTu__ "llu" #define __UINT64_FMTx__ "llx" #define __UINT64_MAX__ 18446744073709551615ULL #define __UINT64_TYPE__ long long unsigned int #define __UINT8_C_SUFFIX__ #define __UINT8_FMTX__ "hhX" #define __UINT8_FMTo__ "hho" #define __UINT8_FMTu__ "hhu" #define __UINT8_FMTx__ "hhx" #define __UINT8_MAX__ 255 #define __UINT8_TYPE__ unsigned char #define __UINTMAX_C_SUFFIX__ UL #define __UINTMAX_FMTX__ "lX" #define __UINTMAX_FMTo__ "lo" #define __UINTMAX_FMTu__ "lu" #define __UINTMAX_FMTx__ "lx" #define __UINTMAX_MAX__ 18446744073709551615UL #define __UINTMAX_TYPE__ long unsigned int #define __UINTMAX_WIDTH__ 64 #define __UINTPTR_FMTX__ "lX" #define __UINTPTR_FMTo__ "lo" #define __UINTPTR_FMTu__ "lu" #define __UINTPTR_FMTx__ "lx" #define __UINTPTR_MAX__ 18446744073709551615UL #define __UINTPTR_TYPE__ long unsigned int #define __UINTPTR_WIDTH__ 64 #define __UINT_FAST16_FMTX__ "hX" #define __UINT_FAST16_FMTo__ "ho" #define __UINT_FAST16_FMTu__ "hu" #define __UINT_FAST16_FMTx__ "hx" #define __UINT_FAST16_MAX__ 65535 #define __UINT_FAST16_TYPE__ unsigned short #define __UINT_FAST32_FMTX__ "X" #define __UINT_FAST32_FMTo__ "o" #define __UINT_FAST32_FMTu__ "u" #define __UINT_FAST32_FMTx__ "x" #define __UINT_FAST32_MAX__ 4294967295U #define __UINT_FAST32_TYPE__ unsigned int #define __UINT_FAST64_FMTX__ "llX" #define __UINT_FAST64_FMTo__ "llo" #define __UINT_FAST64_FMTu__ "llu" #define __UINT_FAST64_FMTx__ "llx" #define __UINT_FAST64_MAX__ 18446744073709551615ULL #define __UINT_FAST64_TYPE__ long long unsigned int #define __UINT_FAST8_FMTX__ "hhX" #define __UINT_FAST8_FMTo__ "hho" #define __UINT_FAST8_FMTu__ "hhu" #define __UINT_FAST8_FMTx__ "hhx" #define __UINT_FAST8_MAX__ 255 #define __UINT_FAST8_TYPE__ unsigned char #define __UINT_LEAST16_FMTX__ "hX" #define __UINT_LEAST16_FMTo__ "ho" #define __UINT_LEAST16_FMTu__ "hu" #define __UINT_LEAST16_FMTx__ "hx" #define __UINT_LEAST16_MAX__ 65535 #define __UINT_LEAST16_TYPE__ unsigned short #define __UINT_LEAST32_FMTX__ "X" #define __UINT_LEAST32_FMTo__ "o" #define __UINT_LEAST32_FMTu__ "u" #define __UINT_LEAST32_FMTx__ "x" #define __UINT_LEAST32_MAX__ 4294967295U #define __UINT_LEAST32_TYPE__ unsigned int #define __UINT_LEAST64_FMTX__ "llX" #define __UINT_LEAST64_FMTo__ "llo" #define __UINT_LEAST64_FMTu__ "llu" #define __UINT_LEAST64_FMTx__ "llx" #define __UINT_LEAST64_MAX__ 18446744073709551615ULL #define __UINT_LEAST64_TYPE__ long long unsigned int #define __UINT_LEAST8_FMTX__ "hhX" #define __UINT_LEAST8_FMTo__ "hho" #define __UINT_LEAST8_FMTu__ "hhu" #define __UINT_LEAST8_FMTx__ "hhx" #define __UINT_LEAST8_MAX__ 255 #define __UINT_LEAST8_TYPE__ unsigned char #define __USER_LABEL_PREFIX__ _ #define __VERSION__ "Apple LLVM 12.0.5 (clang-1205.0.22.11)" #define __WCHAR_MAX__ 2147483647 #define __WCHAR_TYPE__ int #define __WCHAR_WIDTH__ 32 #define __WINT_MAX__ 2147483647 #define __WINT_TYPE__ int #define __WINT_WIDTH__ 32 #define __aarch64__ 1 #define __apple_build_version__ 12050022 #define __arm64 1 #define __arm64__ 1 #define __block __attribute__((__blocks__(byref))) #define __clang__ 1 #define __clang_major__ 12 #define __clang_minor__ 0 #define __clang_patchlevel__ 5 #define __clang_version__ "12.0.5 (clang-1205.0.22.11)" #define __llvm__ 1 #define __nonnull _Nonnull #define __null_unspecified _Null_unspecified #define __nullable _Nullable #define __pic__ 2 #define __strong #define __unsafe_unretained #define __weak __attribute__((objc_gc(weak))) Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc --help | head -n 20 stdout: OVERVIEW: clang LLVM compiler USAGE: clang [options] file... OPTIONS: -### Print (but do not run) the commands to run for this compilation --analyzer-output Static analyzer report output format (html|plist|plist-multi-file|plist-html|sarif|text). --analyze Run the static analyzer -arcmt-migrate-emit-errors Emit ARC errors even if the migrator can fix them -arcmt-migrate-report-output Output path for the plist report -B Add to search path for binaries and object files used implicitly -CC Include comments from within macros in preprocessed output -cl-denorms-are-zero OpenCL only. Allow denormals to be flushed to zero. -cl-fast-relaxed-math OpenCL only. Sets -cl-finite-math-only and -cl-unsafe-math-optimizations, and defines __FAST_RELAXED_MATH__. -cl-finite-math-only OpenCL only. Allow floating-point optimizations that assume arguments and results are not NaNs or +-Inf. -cl-fp32-correctly-rounded-divide-sqrt OpenCL only. Specify that single precision floating-point divide and sqrt used in the program source are correctly rounded. ============================================================================================= TESTING: checkC99Flag from config.compilers(config/BuildSystem/config/compilers.py:1374) Check for -std=c99 or equivalent flag Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { float x[2],y; float *restrict z = &y; y = FLT_ROUNDS; // c++ comment int j = 2; for (int i=0; i<2; i++){ x[i] = i*j*(*z); } ; return 0; } Output from compiling with -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 Accepted C99 compile flag: ============================================================================================= TESTING: checkCFormatting from config.compilers(config/BuildSystem/config/compilers.py:359) Activate format string checking if using the GNU compilers ============================================================================================= TESTING: checkDynamicLoadFlag from config.compilers(config/BuildSystem/config/compilers.py:370) Checks that dlopen() takes RTLD_XXX, and defines PETSC_HAVE_RTLD_XXX if it does ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include char *libname; int main() { dlopen(libname, RTLD_LAZY);dlopen(libname, RTLD_NOW);dlopen(libname, RTLD_LOCAL);dlopen(libname, RTLD_GLOBAL); ; return 0; } Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -ldl Defined "HAVE_RTLD_LAZY" to "1" Defined "HAVE_RTLD_NOW" to "1" Defined "HAVE_RTLD_LOCAL" to "1" Defined "HAVE_RTLD_GLOBAL" to "1" ============================================================================================= TESTING: checkCLibraries from config.compilers(config/BuildSystem/config/compilers.py:162) Determines the libraries needed to link with C compiled code ===== Checking compiler Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include void asub(void) {char s[16];printf("testing %s",s);} ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.F90 Successful compile: Source: program main print*,'testing' stop end Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/confc.o -ldl C libraries are not needed when using Fortran linker ============================================================================================= TESTING: checkDependencyGenerationFlag from config.compilers(config/BuildSystem/config/compilers.py:1325) Check if -MMD works for dependency generation, and add it if it does Trying C compiler flag -MMD -MP Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 -MMD -MP /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Output from compiling with -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 -MMD -MP Defined make macro "C_DEPFLAGS" to "-MMD -MP" ============================================================================================= TESTING: checkFortranNameMangling from config.compilers(config/BuildSystem/config/compilers.py:787) Checks Fortran name mangling, and defines HAVE_FORTRAN_UNDERSCORE, HAVE_FORTRAN_NOUNDERSCORE, HAVE_FORTRAN_CAPS Testing Fortran mangling type underscore with code void d1chk_(void){return;} ===== Checking compiler Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" void d1chk_(void){return;} ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.F90 Successful compile: Source: program main call d1chk() end Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/confc.o -ldl compilers: Fortran name mangling is underscore Defined "HAVE_FORTRAN_UNDERSCORE" to "1" Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 --version stdout: GNU Fortran (Homebrew GCC 11.2.0_3) 11.2.0 Copyright (C) 2021 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. Detected GFortran8plus compiler Defined "FORTRAN_CHARLEN_T" to "size_t" ============================================================================================= TESTING: checkFortranNameManglingDouble from config.compilers(config/BuildSystem/config/compilers.py:825) Checks if symbols containing an underscore append an extra underscore, and defines HAVE_FORTRAN_UNDERSCORE_UNDERSCORE if necessary ===== Checking compiler Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" void d1_chk__(void){return;} ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.F90 Successful compile: Source: program main call d1_chk() end Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/confc.o -ldl Possible ERROR while running linker: exit code 1 stderr: Undefined symbols for architecture arm64: "_d1_chk_", referenced from: _MAIN__ in conftest.o (maybe you meant: _d1_chk__) ld: symbol(s) not found for architecture arm64 collect2: error: ld returned 1 exit status Linker output before filtering: Undefined symbols for architecture arm64: "_d1_chk_", referenced from: _MAIN__ in conftest.o (maybe you meant: _d1_chk__) ld: symbol(s) not found for architecture arm64 collect2: error: ld returned 1 exit status : Linker output after filtering: Undefined symbols for architecture arm64: "_d1_chk_", referenced from: _MAIN__ in conftest.o (maybe you meant: _d1_chk__) ld: symbol(s) not found for architecture arm64 collect2: error: ld returned 1 exit status: ============================================================================================= TESTING: checkFortranLibraries from config.compilers(config/BuildSystem/config/compilers.py:835) Substitutes for FLIBS the libraries needed to link with Fortran This macro is intended to be used in those situations when it is necessary to mix, e.g. C++ and Fortran 77, source code into a single program or shared library. For example, if object files from a C++ and Fortran 77 compiler must be linked together, then the C++ compiler/linker must be used for linking (since special C++-ish things need to happen at link time like calling global constructors, instantiating templates, enabling exception support, etc.). However, the Fortran 77 intrinsic and run-time libraries must be linked in as well, but the C++ compiler/linker does not know how to add these Fortran 77 libraries. This code was translated from the autoconf macro which was packaged in its current form by Matthew D. Langston . However, nearly all of this macro came from the OCTAVE_FLIBS macro in octave-2.0.13/aclocal.m4, and full credit should go to John W. Eaton for writing this extremely useful macro. ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.F90 Successful compile: Source: program main use mpi call MPI_Allreduce() end Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -ldl ===== Checking compiler Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.F90 Successful compile: Source: subroutine asub() use mpi print*,'testing' call MPI_Allreduce() return end ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" extern void asub_(void); int main(int argc,char **args) { asub_(); return 0; } Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/confc.o -ldl Possible ERROR while running linker: exit code 1 stderr: ld: warning: object file (/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/confc.o) was built for newer macOS version (11.5) than being linked (11.0) Undefined symbols for architecture arm64: "__gfortran_st_write", referenced from: _asub_ in confc.o "__gfortran_st_write_done", referenced from: _asub_ in confc.o "__gfortran_transfer_character_write", referenced from: _asub_ in confc.o "_mpi_allreduce_", referenced from: _asub_ in confc.o ld: symbol(s) not found for architecture arm64 clang: error: linker command failed with exit code 1 (use -v to see invocation) Linker output before filtering: ld: warning: object file (/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/confc.o) was built for newer macOS version (11.5) than being linked (11.0) Undefined symbols for architecture arm64: "__gfortran_st_write", referenced from: _asub_ in confc.o "__gfortran_st_write_done", referenced from: _asub_ in confc.o "__gfortran_transfer_character_write", referenced from: _asub_ in confc.o "_mpi_allreduce_", referenced from: _asub_ in confc.o ld: symbol(s) not found for architecture arm64 clang: error: linker command failed with exit code 1 (use -v to see invocation) : Linker output after filtering: Undefined symbols for architecture arm64: "__gfortran_st_write", referenced from: _asub_ in confc.o "__gfortran_st_write_done", referenced from: _asub_ in confc.o "__gfortran_transfer_character_write", referenced from: _asub_ in confc.o "_mpi_allreduce_", referenced from: _asub_ in confc.o ld: symbol(s) not found for architecture arm64 clang: error: linker command failed with exit code 1 (use -v to see invocation): Fortran code cannot directly be linked with C linker, therefore will determine needed Fortran libraries Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.F90 Successful compile: Source: program main end Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest -v -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -ldl stdout: mpifort for MPICH version 3.4.2 Possible ERROR while running linker: stdout: mpifort for MPICH version 3.4.2stderr: Driving: gfortran -fPIC -ffree-line-length-0 -g -O0 -fallow-argument-mismatch -Wl,-flat_namespace -Wl,-commons,use_dylibs -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest -v -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -ldl -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include -L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -lmpifort -lmpi -lpmpi -mmacosx-version-min=11.5.0 -asm_macosx_version_min=11.5 -l gfortran Using built-in specs. COLLECT_GCC=gfortran COLLECT_LTO_WRAPPER=/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../libexec/gcc/aarch64-apple-darwin20/11/lto-wrapper Target: aarch64-apple-darwin20 Configured with: ../configure --prefix=/opt/homebrew/opt/gcc --libdir=/opt/homebrew/opt/gcc/lib/gcc/11 --disable-nls --enable-checking=release --with-gcc-major-version-only --enable-languages=c,c++,objc,obj-c++,fortran --program-suffix=-11 --with-gmp=/opt/homebrew/opt/gmp --with-mpfr=/opt/homebrew/opt/mpfr --with-mpc=/opt/homebrew/opt/libmpc --with-isl=/opt/homebrew/opt/isl --with-zstd=/opt/homebrew/opt/zstd --with-pkgversion='Homebrew GCC 11.2.0_3' --with-bugurl=https://github.com/Homebrew/homebrew-core/issues --build=aarch64-apple-darwin20 --with-system-zlib --with-native-system-header-dir=/usr/include --with-sysroot=/Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk Thread model: posix Supported LTO compression algorithms: zlib zstd gcc version 11.2.0 (Homebrew GCC 11.2.0_3) Reading specs from /opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11/../../../libgfortran.spec rename spec lib to liborig COLLECT_GCC_OPTIONS='-fPIC' '-ffree-line-length-0' '-g' '-O0' '-fallow-argument-mismatch' '-o' '/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest' '-v' '-Wall' '-ffree-line-length-0' '-Wno-unused-dummy-argument' '-g' '-O0' '-I' '/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include' '-I' '/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include' '-L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib' '-mmacosx-version-min=11.5.0' '-asm_macosx_version_min=11.5' '-mlittle-endian' '-mabi=lp64' '-dumpdir' '/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/' COMPILER_PATH=/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../libexec/gcc/aarch64-apple-darwin20/11/:/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../libexec/gcc/ LIBRARY_PATH=/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11/:/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/:/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11/../../../ COLLECT_GCC_OPTIONS='-fPIC' '-ffree-line-length-0' '-g' '-O0' '-fallow-argument-mismatch' '-o' '/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest' '-v' '-Wall' '-ffree-line-length-0' '-Wno-unused-dummy-argument' '-g' '-O0' '-I' '/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include' '-I' '/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include' '-L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib' '-mmacosx-version-min=11.5.0' '-asm_macosx_version_min=11.5' '-mlittle-endian' '-mabi=lp64' '-dumpdir' '/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.' /opt/homebrew/Cellar/gcc/11.2.0_3/bin/../libexec/gcc/aarch64-apple-darwin20/11/collect2 -syslibroot /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/ -dynamic -arch arm64 -macosx_version_min 11.5.0 -weak_reference_mismatches non-weak -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest -L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -L/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11 -L/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc -L/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11/../../.. -flat_namespace -commons use_dylibs -bind_at_load -multiply_defined suppress -multiply_defined suppress -commons use_dylibs -search_paths_first -no_compact_unwind -bind_at_load -multiply_defined suppress -multiply_defined suppress -commons use_dylibs -search_paths_first -no_compact_unwind /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -lmpifort -lmpi -lpmpi -lgfortran -lgcc_s.1.1 -lgcc -lm -lgcc_s.1.1 -lgcc -lSystem -lgcc -no_compact_unwind -rpath @loader_path -rpath /opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11 -rpath /opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc -rpath /opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11/../../.. -v -idsym collect2 version 11.2.0 /usr/bin/ld -syslibroot /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/ -dynamic -arch arm64 -macosx_version_min 11.5.0 -weak_reference_mismatches non-weak -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest -L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -L/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11 -L/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc -L/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11/../../.. -flat_namespace -commons use_dylibs -bind_at_load -multiply_defined suppress -multiply_defined suppress -commons use_dylibs -search_paths_first -no_compact_unwind -bind_at_load -multiply_defined suppress -multiply_defined suppress -commons use_dylibs -search_paths_first -no_compact_unwind /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -lmpifort -lmpi -lpmpi -lgfortran -lgcc_s.1.1 -lgcc -lm -lgcc_s.1.1 -lgcc -lSystem -lgcc -no_compact_unwind -rpath @loader_path -rpath /opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11 -rpath /opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc -rpath /opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11/../../.. -v @(#)PROGRAM:ld PROJECT:ld64-650.9 BUILD 13:09:13 May 28 2021 configured to support archs: armv6 armv7 armv7s arm64 arm64e arm64_32 i386 x86_64 x86_64h armv6m armv7k armv7m armv7em Library search paths: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib /opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 /opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc /opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/lib Framework search paths: /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/System/Library/Frameworks/ Linker output before filtering: mpifort for MPICH version 3.4.2 Driving: gfortran -fPIC -ffree-line-length-0 -g -O0 -fallow-argument-mismatch -Wl,-flat_namespace -Wl,-commons,use_dylibs -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest -v -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -ldl -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include -L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -lmpifort -lmpi -lpmpi -mmacosx-version-min=11.5.0 -asm_macosx_version_min=11.5 -l gfortran Using built-in specs. COLLECT_GCC=gfortran COLLECT_LTO_WRAPPER=/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../libexec/gcc/aarch64-apple-darwin20/11/lto-wrapper Target: aarch64-apple-darwin20 Configured with: ../configure --prefix=/opt/homebrew/opt/gcc --libdir=/opt/homebrew/opt/gcc/lib/gcc/11 --disable-nls --enable-checking=release --with-gcc-major-version-only --enable-languages=c,c++,objc,obj-c++,fortran --program-suffix=-11 --with-gmp=/opt/homebrew/opt/gmp --with-mpfr=/opt/homebrew/opt/mpfr --with-mpc=/opt/homebrew/opt/libmpc --with-isl=/opt/homebrew/opt/isl --with-zstd=/opt/homebrew/opt/zstd --with-pkgversion='Homebrew GCC 11.2.0_3' --with-bugurl=https://github.com/Homebrew/homebrew-core/issues --build=aarch64-apple-darwin20 --with-system-zlib --with-native-system-header-dir=/usr/include --with-sysroot=/Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk Thread model: posix Supported LTO compression algorithms: zlib zstd gcc version 11.2.0 (Homebrew GCC 11.2.0_3) Reading specs from /opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11/../../../libgfortran.spec rename spec lib to liborig COLLECT_GCC_OPTIONS='-fPIC' '-ffree-line-length-0' '-g' '-O0' '-fallow-argument-mismatch' '-o' '/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest' '-v' '-Wall' '-ffree-line-length-0' '-Wno-unused-dummy-argument' '-g' '-O0' '-I' '/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include' '-I' '/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include' '-L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib' '-mmacosx-version-min=11.5.0' '-asm_macosx_version_min=11.5' '-mlittle-endian' '-mabi=lp64' '-dumpdir' '/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/' COMPILER_PATH=/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../libexec/gcc/aarch64-apple-darwin20/11/:/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../libexec/gcc/ LIBRARY_PATH=/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11/:/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/:/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11/../../../ COLLECT_GCC_OPTIONS='-fPIC' '-ffree-line-length-0' '-g' '-O0' '-fallow-argument-mismatch' '-o' '/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest' '-v' '-Wall' '-ffree-line-length-0' '-Wno-unused-dummy-argument' '-g' '-O0' '-I' '/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include' '-I' '/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include' '-L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib' '-mmacosx-version-min=11.5.0' '-asm_macosx_version_min=11.5' '-mlittle-endian' '-mabi=lp64' '-dumpdir' '/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.' /opt/homebrew/Cellar/gcc/11.2.0_3/bin/../libexec/gcc/aarch64-apple-darwin20/11/collect2 -syslibroot /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/ -dynamic -arch arm64 -macosx_version_min 11.5.0 -weak_reference_mismatches non-weak -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest -L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -L/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11 -L/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc -L/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11/../../.. -flat_namespace -commons use_dylibs -bind_at_load -multiply_defined suppress -multiply_defined suppress -commons use_dylibs -search_paths_first -no_compact_unwind -bind_at_load -multiply_defined suppress -multiply_defined suppress -commons use_dylibs -search_paths_first -no_compact_unwind /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -lmpifort -lmpi -lpmpi -lgfortran -lgcc_s.1.1 -lgcc -lm -lgcc_s.1.1 -lgcc -lSystem -lgcc -no_compact_unwind -rpath @loader_path -rpath /opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11 -rpath /opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc -rpath /opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11/../../.. -v -idsym collect2 version 11.2.0 /usr/bin/ld -syslibroot /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/ -dynamic -arch arm64 -macosx_version_min 11.5.0 -weak_reference_mismatches non-weak -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest -L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -L/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11 -L/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc -L/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11/../../.. -flat_namespace -commons use_dylibs -bind_at_load -multiply_defined suppress -multiply_defined suppress -commons use_dylibs -search_paths_first -no_compact_unwind -bind_at_load -multiply_defined suppress -multiply_defined suppress -commons use_dylibs -search_paths_first -no_compact_unwind /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -lmpifort -lmpi -lpmpi -lgfortran -lgcc_s.1.1 -lgcc -lm -lgcc_s.1.1 -lgcc -lSystem -lgcc -no_compact_unwind -rpath @loader_path -rpath /opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11 -rpath /opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc -rpath /opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11/../../.. -v @(#)PROGRAM:ld PROJECT:ld64-650.9 BUILD 13:09:13 May 28 2021 configured to support archs: armv6 armv7 armv7s arm64 arm64e arm64_32 i386 x86_64 x86_64h armv6m armv7k armv7m armv7em Library search paths: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib /opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 /opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc /opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/lib Framework search paths: /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/System/Library/Frameworks/ : Linker output after filtering: mpifort for MPICH version 3.4.2 Driving: gfortran -fPIC -ffree-line-length-0 -g -O0 -fallow-argument-mismatch -Wl,-flat_namespace -Wl,-commons,use_dylibs -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest -v -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -ldl -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include -L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -lmpifort -lmpi -lpmpi -mmacosx-version-min=11.5.0 -asm_macosx_version_min=11.5 -l gfortran Using built-in specs. COLLECT_GCC=gfortran COLLECT_LTO_WRAPPER=/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../libexec/gcc/aarch64-apple-darwin20/11/lto-wrapper Target: aarch64-apple-darwin20 Configured with: ../configure --prefix=/opt/homebrew/opt/gcc --libdir=/opt/homebrew/opt/gcc/lib/gcc/11 --disable-nls --enable-checking=release --with-gcc-major-version-only --enable-languages=c,c++,objc,obj-c++,fortran --program-suffix=-11 --with-gmp=/opt/homebrew/opt/gmp --with-mpfr=/opt/homebrew/opt/mpfr --with-mpc=/opt/homebrew/opt/libmpc --with-isl=/opt/homebrew/opt/isl --with-zstd=/opt/homebrew/opt/zstd --with-pkgversion='Homebrew GCC 11.2.0_3' --with-bugurl=https://github.com/Homebrew/homebrew-core/issues --build=aarch64-apple-darwin20 --with-system-zlib --with-native-system-header-dir=/usr/include --with-sysroot=/Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk Thread model: posix Supported LTO compression algorithms: zlib zstd gcc version 11.2.0 (Homebrew GCC 11.2.0_3) Reading specs from /opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11/../../../libgfortran.spec rename spec lib to liborig COLLECT_GCC_OPTIONS='-fPIC' '-ffree-line-length-0' '-g' '-O0' '-fallow-argument-mismatch' '-o' '/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest' '-v' '-Wall' '-ffree-line-length-0' '-Wno-unused-dummy-argument' '-g' '-O0' '-I' '/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include' '-I' '/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include' '-L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib' '-mmacosx-version-min=11.5.0' '-asm_macosx_version_min=11.5' '-mlittle-endian' '-mabi=lp64' '-dumpdir' '/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/' COMPILER_PATH=/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../libexec/gcc/aarch64-apple-darwin20/11/:/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../libexec/gcc/ LIBRARY_PATH=/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11/:/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/:/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11/../../../ COLLECT_GCC_OPTIONS='-fPIC' '-ffree-line-length-0' '-g' '-O0' '-fallow-argument-mismatch' '-o' '/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest' '-v' '-Wall' '-ffree-line-length-0' '-Wno-unused-dummy-argument' '-g' '-O0' '-I' '/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include' '-I' '/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include' '-L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib' '-mmacosx-version-min=11.5.0' '-asm_macosx_version_min=11.5' '-mlittle-endian' '-mabi=lp64' '-dumpdir' '/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.' /opt/homebrew/Cellar/gcc/11.2.0_3/bin/../libexec/gcc/aarch64-apple-darwin20/11/collect2 -syslibroot /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/ -dynamic -arch arm64 -macosx_version_min 11.5.0 -weak_reference_mismatches non-weak -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest -L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -L/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11 -L/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc -L/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11/../../.. -flat_namespace -commons use_dylibs -bind_at_load -multiply_defined suppress -multiply_defined suppress -commons use_dylibs -search_paths_first -no_compact_unwind -bind_at_load -multiply_defined suppress -multiply_defined suppress -commons use_dylibs -search_paths_first -no_compact_unwind /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -lmpifort -lmpi -lpmpi -lgfortran -lgcc_s.1.1 -lgcc -lm -lgcc_s.1.1 -lgcc -lSystem -lgcc -no_compact_unwind -rpath @loader_path -rpath /opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11 -rpath /opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc -rpath /opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11/../../.. -v -idsym collect2 version 11.2.0 /usr/bin/ld -syslibroot /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/ -dynamic -arch arm64 -macosx_version_min 11.5.0 -weak_reference_mismatches non-weak -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest -L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -L/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11 -L/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc -L/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11/../../.. -flat_namespace -commons use_dylibs -bind_at_load -multiply_defined suppress -multiply_defined suppress -commons use_dylibs -search_paths_first -no_compact_unwind -bind_at_load -multiply_defined suppress -multiply_defined suppress -commons use_dylibs -search_paths_first -no_compact_unwind /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -lmpifort -lmpi -lpmpi -lgfortran -lgcc_s.1.1 -lgcc -lm -lgcc_s.1.1 -lgcc -lSystem -lgcc -no_compact_unwind -rpath @loader_path -rpath /opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11 -rpath /opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc -rpath /opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11/../../.. -v @(#)PROGRAM:ld PROJECT:ld64-650.9 BUILD 13:09:13 May 28 2021 configured to support archs: armv6 armv7 armv7s arm64 arm64e arm64_32 i386 x86_64 x86_64h armv6m armv7k armv7m armv7em Library search paths: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib /opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 /opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc /opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/lib Framework search paths: /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/System/Library/Frameworks/: Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 -V compilers: Checking arg mpifort compilers: Unknown arg mpifort compilers: Checking arg for compilers: Unknown arg for compilers: Checking arg MPICH compilers: Unknown arg MPICH compilers: Checking arg version compilers: Unknown arg version compilers: Checking arg 3.4.2 compilers: Unknown arg 3.4.2 compilers: Checking arg Driving: compilers: Unknown arg Driving: compilers: Checking arg gfortran compilers: Unknown arg gfortran compilers: Checking arg -fPIC compilers: Unknown arg -fPIC compilers: Checking arg -ffree-line-length-0 compilers: Unknown arg -ffree-line-length-0 compilers: Checking arg -g compilers: Unknown arg -g compilers: Checking arg -O0 compilers: Unknown arg -O0 compilers: Checking arg -fallow-argument-mismatch compilers: Unknown arg -fallow-argument-mismatch compilers: Checking arg -Wl,-flat_namespace compilers: Unknown arg -Wl,-flat_namespace compilers: Checking arg -Wl,-commons,use_dylibs compilers: Unknown arg -Wl,-commons,use_dylibs compilers: Checking arg -o compilers: Unknown arg -o compilers: Checking arg /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest compilers: Unknown arg /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest compilers: Checking arg -v compilers: Unknown arg -v compilers: Checking arg -Wl,-bind_at_load compilers: Unknown arg -Wl,-bind_at_load compilers: Checking arg -Wl,-multiply_defined,suppress compilers: Unknown arg -Wl,-multiply_defined,suppress compilers: Checking arg -Wl,-multiply_defined compilers: Unknown arg -Wl,-multiply_defined compilers: Checking arg -Wl,suppress compilers: Unknown arg -Wl,suppress compilers: Checking arg -Wl,-commons,use_dylibs compilers: Unknown arg -Wl,-commons,use_dylibs compilers: Checking arg -Wl,-search_paths_first compilers: Unknown arg -Wl,-search_paths_first compilers: Checking arg -Wl,-no_compact_unwind compilers: Unknown arg -Wl,-no_compact_unwind compilers: Checking arg -Wl,-bind_at_load compilers: Unknown arg -Wl,-bind_at_load compilers: Checking arg -Wl,-multiply_defined,suppress compilers: Unknown arg -Wl,-multiply_defined,suppress compilers: Checking arg -Wl,-multiply_defined compilers: Unknown arg -Wl,-multiply_defined compilers: Checking arg -Wl,suppress compilers: Unknown arg -Wl,suppress compilers: Checking arg -Wl,-commons,use_dylibs compilers: Unknown arg -Wl,-commons,use_dylibs compilers: Checking arg -Wl,-search_paths_first compilers: Unknown arg -Wl,-search_paths_first compilers: Checking arg -Wl,-no_compact_unwind compilers: Unknown arg -Wl,-no_compact_unwind compilers: Checking arg -Wall compilers: Unknown arg -Wall compilers: Checking arg -ffree-line-length-0 compilers: Unknown arg -ffree-line-length-0 compilers: Checking arg -Wno-unused-dummy-argument compilers: Unknown arg -Wno-unused-dummy-argument compilers: Checking arg -g compilers: Unknown arg -g compilers: Checking arg -O0 compilers: Unknown arg -O0 compilers: Checking arg /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o compilers: Unknown arg /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o compilers: Checking arg -ldl compilers: Found library: -ldl compilers: Checking arg -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include compilers: Found include directory: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include compilers: Checking arg -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include compilers: Found include directory: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include compilers: Checking arg -L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib compilers: Found library directory: -L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib compilers: Checking arg -lmpifort compilers: Found library: -lmpifort compilers: Checking arg -lmpi compilers: Found library: -lmpi compilers: Checking arg -lpmpi compilers: Found library: -lpmpi compilers: Checking arg -mmacosx-version-min=11.5.0 compilers: Unknown arg -mmacosx-version-min=11.5.0 compilers: Checking arg -asm_macosx_version_min=11.5 compilers: Unknown arg -asm_macosx_version_min=11.5 compilers: Checking arg -l compilers: Found canonical library: -lgfortran compilers: Checking arg Using compilers: Unknown arg Using compilers: Checking arg built-in compilers: Unknown arg built-in compilers: Checking arg specs. compilers: Unknown arg specs. compilers: Checking arg COLLECT_GCC=gfortran compilers: Unknown arg COLLECT_GCC=gfortran compilers: Checking arg COLLECT_LTO_WRAPPER=/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../libexec/gcc/aarch64-apple-darwin20/11/lto-wrapper compilers: Unknown arg COLLECT_LTO_WRAPPER=/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../libexec/gcc/aarch64-apple-darwin20/11/lto-wrapper compilers: Checking arg Target: compilers: Unknown arg Target: compilers: Checking arg aarch64-apple-darwin20 compilers: Unknown arg aarch64-apple-darwin20 compilers: Checking arg Configured compilers: Unknown arg Configured compilers: Checking arg with: compilers: Unknown arg with: compilers: Checking arg ../configure compilers: Unknown arg ../configure compilers: Checking arg --prefix=/opt/homebrew/opt/gcc compilers: Unknown arg --prefix=/opt/homebrew/opt/gcc compilers: Checking arg --libdir=/opt/homebrew/opt/gcc/lib/gcc/11 compilers: Unknown arg --libdir=/opt/homebrew/opt/gcc/lib/gcc/11 compilers: Checking arg --disable-nls compilers: Unknown arg --disable-nls compilers: Checking arg --enable-checking=release compilers: Unknown arg --enable-checking=release compilers: Checking arg --with-gcc-major-version-only compilers: Unknown arg --with-gcc-major-version-only compilers: Checking arg --enable-languages=c,c++,objc,obj-c++,fortran compilers: Unknown arg --enable-languages=c,c++,objc,obj-c++,fortran compilers: Checking arg --program-suffix=-11 compilers: Unknown arg --program-suffix=-11 compilers: Checking arg --with-gmp=/opt/homebrew/opt/gmp compilers: Unknown arg --with-gmp=/opt/homebrew/opt/gmp compilers: Checking arg --with-mpfr=/opt/homebrew/opt/mpfr compilers: Unknown arg --with-mpfr=/opt/homebrew/opt/mpfr compilers: Checking arg --with-mpc=/opt/homebrew/opt/libmpc compilers: Unknown arg --with-mpc=/opt/homebrew/opt/libmpc compilers: Checking arg --with-isl=/opt/homebrew/opt/isl compilers: Unknown arg --with-isl=/opt/homebrew/opt/isl compilers: Checking arg --with-zstd=/opt/homebrew/opt/zstd compilers: Unknown arg --with-zstd=/opt/homebrew/opt/zstd compilers: Checking arg --with-pkgversion= compilers: Unknown arg --with-pkgversion= compilers: Checking arg --with-bugurl=https://github.com/Homebrew/homebrew-core/issues compilers: Unknown arg --with-bugurl=https://github.com/Homebrew/homebrew-core/issues compilers: Checking arg --build=aarch64-apple-darwin20 compilers: Unknown arg --build=aarch64-apple-darwin20 compilers: Checking arg --with-system-zlib compilers: Unknown arg --with-system-zlib compilers: Checking arg --with-native-system-header-dir=/usr/include compilers: Unknown arg --with-native-system-header-dir=/usr/include compilers: Checking arg --with-sysroot=/Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk compilers: Unknown arg --with-sysroot=/Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk compilers: Checking arg Thread compilers: Unknown arg Thread compilers: Checking arg model: compilers: Unknown arg model: compilers: Checking arg posix compilers: Unknown arg posix compilers: Checking arg Supported compilers: Unknown arg Supported compilers: Checking arg LTO compilers: Unknown arg LTO compilers: Checking arg compression compilers: Unknown arg compression compilers: Checking arg algorithms: compilers: Unknown arg algorithms: compilers: Checking arg zlib compilers: Unknown arg zlib compilers: Checking arg zstd compilers: Unknown arg zstd compilers: Checking arg gcc compilers: Unknown arg gcc compilers: Checking arg version compilers: Unknown arg version compilers: Checking arg 11.2.0 compilers: Unknown arg 11.2.0 compilers: Checking arg (Homebrew compilers: Unknown arg (Homebrew compilers: Checking arg GCC compilers: Unknown arg GCC compilers: Checking arg 11.2.0_3) compilers: Unknown arg 11.2.0_3) compilers: Checking arg Reading compilers: Unknown arg Reading compilers: Checking arg specs compilers: Unknown arg specs compilers: Checking arg from compilers: Unknown arg from compilers: Checking arg /opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11/../../../libgfortran.spec compilers: Unknown arg /opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11/../../../libgfortran.spec compilers: Checking arg rename compilers: Unknown arg rename compilers: Checking arg spec compilers: Unknown arg spec compilers: Checking arg lib compilers: Unknown arg lib compilers: Checking arg to compilers: Unknown arg to compilers: Checking arg liborig compilers: Unknown arg liborig compilers: Checking arg COLLECT_GCC_OPTIONS= compilers: Unknown arg COLLECT_GCC_OPTIONS= compilers: Checking arg COMPILER_PATH=/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../libexec/gcc/aarch64-apple-darwin20/11/:/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../libexec/gcc/ compilers: Skipping arg COMPILER_PATH=/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../libexec/gcc/aarch64-apple-darwin20/11/:/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../libexec/gcc/ compilers: Checking arg LIBRARY_PATH=/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11/:/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/:/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11/../../../ compilers: Skipping arg LIBRARY_PATH=/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11/:/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/:/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11/../../../ compilers: Checking arg COLLECT_GCC_OPTIONS= compilers: Unknown arg COLLECT_GCC_OPTIONS= compilers: Checking arg /opt/homebrew/Cellar/gcc/11.2.0_3/bin/../libexec/gcc/aarch64-apple-darwin20/11/collect2 compilers: Unknown arg /opt/homebrew/Cellar/gcc/11.2.0_3/bin/../libexec/gcc/aarch64-apple-darwin20/11/collect2 compilers: Checking arg -syslibroot compilers: Unknown arg -syslibroot compilers: Checking arg /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/ compilers: Unknown arg /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/ compilers: Checking arg -dynamic compilers: Unknown arg -dynamic compilers: Checking arg -arch compilers: Unknown arg -arch compilers: Checking arg arm64 compilers: Unknown arg arm64 compilers: Checking arg -macosx_version_min compilers: Unknown arg -macosx_version_min compilers: Checking arg 11.5.0 compilers: Unknown arg 11.5.0 compilers: Checking arg -weak_reference_mismatches compilers: Unknown arg -weak_reference_mismatches compilers: Checking arg non-weak compilers: Unknown arg non-weak compilers: Checking arg -o compilers: Unknown arg -o compilers: Checking arg /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest compilers: Unknown arg /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest compilers: Checking arg -L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib compilers: Already in lflags so skipping: -L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib compilers: Checking arg -L/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11 compilers: Found library directory: -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 compilers: Checking arg -L/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc compilers: Found library directory: -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc compilers: Checking arg -L/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11/../../.. compilers: Found library directory: -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 compilers: Checking arg -flat_namespace compilers: Unknown arg -flat_namespace compilers: Checking arg -commons compilers: Unknown arg -commons compilers: Checking arg use_dylibs compilers: Unknown arg use_dylibs compilers: Checking arg -bind_at_load compilers: Unknown arg -bind_at_load compilers: Checking arg -multiply_defined compilers: Unknown arg -multiply_defined compilers: Checking arg suppress compilers: Unknown arg suppress compilers: Checking arg -multiply_defined compilers: Unknown arg -multiply_defined compilers: Checking arg suppress compilers: Unknown arg suppress compilers: Checking arg -commons compilers: Unknown arg -commons compilers: Checking arg use_dylibs compilers: Unknown arg use_dylibs compilers: Checking arg -search_paths_first compilers: Unknown arg -search_paths_first compilers: Checking arg -no_compact_unwind compilers: Unknown arg -no_compact_unwind compilers: Checking arg -bind_at_load compilers: Unknown arg -bind_at_load compilers: Checking arg -multiply_defined compilers: Unknown arg -multiply_defined compilers: Checking arg suppress compilers: Unknown arg suppress compilers: Checking arg -multiply_defined compilers: Unknown arg -multiply_defined compilers: Checking arg suppress compilers: Unknown arg suppress compilers: Checking arg -commons compilers: Unknown arg -commons compilers: Checking arg use_dylibs compilers: Unknown arg use_dylibs compilers: Checking arg -search_paths_first compilers: Unknown arg -search_paths_first compilers: Checking arg -no_compact_unwind compilers: Unknown arg -no_compact_unwind compilers: Checking arg /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o compilers: Unknown arg /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o compilers: Checking arg -lmpifort compilers: Already in lflags: -lmpifort compilers: Checking arg -lmpi compilers: Already in lflags: -lmpi compilers: Checking arg -lpmpi compilers: Already in lflags: -lpmpi compilers: Checking arg -lgfortran compilers: Found library: -lgfortran compilers: Checking arg -lgcc_s.1.1 compilers: Found library: -lgcc_s.1.1 compilers: Checking arg -lgcc compilers: Found system library therefore skipping: -lgcc compilers: Checking arg -lm compilers: Found library: -lm compilers: Checking arg -lgcc_s.1.1 compilers: Already in lflags: -lgcc_s.1.1 compilers: Checking arg -lgcc compilers: Found system library therefore skipping: -lgcc compilers: Checking arg -lSystem compilers: Found system library therefore skipping: -lSystem compilers: Checking arg -lgcc compilers: Found system library therefore skipping: -lgcc compilers: Checking arg -no_compact_unwind compilers: Unknown arg -no_compact_unwind compilers: Checking arg -rpath compilers: Checking arg -rpath compilers: Found -rpath library: /opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 compilers: Checking arg -rpath compilers: Found -rpath library: /opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc compilers: Checking arg -rpath compilers: Found -rpath library: /opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 compilers: Checking arg -v compilers: Unknown arg -v compilers: Checking arg -idsym compilers: Unknown arg -idsym compilers: Checking arg collect2 compilers: Unknown arg collect2 compilers: Checking arg version compilers: Unknown arg version compilers: Checking arg 11.2.0 compilers: Unknown arg 11.2.0 compilers: Checking arg /usr/bin/ld compilers: Unknown arg /usr/bin/ld compilers: Checking arg -syslibroot compilers: Unknown arg -syslibroot compilers: Checking arg /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/ compilers: Unknown arg /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/ compilers: Checking arg -dynamic compilers: Unknown arg -dynamic compilers: Checking arg -arch compilers: Unknown arg -arch compilers: Checking arg arm64 compilers: Unknown arg arm64 compilers: Checking arg -macosx_version_min compilers: Unknown arg -macosx_version_min compilers: Checking arg 11.5.0 compilers: Unknown arg 11.5.0 compilers: Checking arg -weak_reference_mismatches compilers: Unknown arg -weak_reference_mismatches compilers: Checking arg non-weak compilers: Unknown arg non-weak compilers: Checking arg -o compilers: Unknown arg -o compilers: Checking arg /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest compilers: Unknown arg /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest compilers: Checking arg -L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib compilers: Already in lflags so skipping: -L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib compilers: Checking arg -L/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11 compilers: Already in lflags so skipping: -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 compilers: Checking arg -L/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc compilers: Already in lflags so skipping: -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc compilers: Checking arg -L/opt/homebrew/Cellar/gcc/11.2.0_3/bin/../lib/gcc/11/gcc/aarch64-apple-darwin20/11/../../.. compilers: Already in lflags so skipping: -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 compilers: Checking arg -flat_namespace compilers: Unknown arg -flat_namespace compilers: Checking arg -commons compilers: Unknown arg -commons compilers: Checking arg use_dylibs compilers: Unknown arg use_dylibs compilers: Checking arg -bind_at_load compilers: Unknown arg -bind_at_load compilers: Checking arg -multiply_defined compilers: Unknown arg -multiply_defined compilers: Checking arg suppress compilers: Unknown arg suppress compilers: Checking arg -multiply_defined compilers: Unknown arg -multiply_defined compilers: Checking arg suppress compilers: Unknown arg suppress compilers: Checking arg -commons compilers: Unknown arg -commons compilers: Checking arg use_dylibs compilers: Unknown arg use_dylibs compilers: Checking arg -search_paths_first compilers: Unknown arg -search_paths_first compilers: Checking arg -no_compact_unwind compilers: Unknown arg -no_compact_unwind compilers: Checking arg -bind_at_load compilers: Unknown arg -bind_at_load compilers: Checking arg -multiply_defined compilers: Unknown arg -multiply_defined compilers: Checking arg suppress compilers: Unknown arg suppress compilers: Checking arg -multiply_defined compilers: Unknown arg -multiply_defined compilers: Checking arg suppress compilers: Unknown arg suppress compilers: Checking arg -commons compilers: Unknown arg -commons compilers: Checking arg use_dylibs compilers: Unknown arg use_dylibs compilers: Checking arg -search_paths_first compilers: Unknown arg -search_paths_first compilers: Checking arg -no_compact_unwind compilers: Unknown arg -no_compact_unwind compilers: Checking arg /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o compilers: Unknown arg /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o compilers: Checking arg -lmpifort compilers: Already in lflags: -lmpifort compilers: Checking arg -lmpi compilers: Already in lflags: -lmpi compilers: Checking arg -lpmpi compilers: Already in lflags: -lpmpi compilers: Checking arg -lgfortran compilers: Already in lflags: -lgfortran compilers: Checking arg -lgcc_s.1.1 compilers: Already in lflags: -lgcc_s.1.1 compilers: Checking arg -lgcc compilers: Found system library therefore skipping: -lgcc compilers: Checking arg -lm compilers: Already in lflags: -lm compilers: Checking arg -lgcc_s.1.1 compilers: Already in lflags: -lgcc_s.1.1 compilers: Checking arg -lgcc compilers: Found system library therefore skipping: -lgcc compilers: Checking arg -lSystem compilers: Found system library therefore skipping: -lSystem compilers: Checking arg -lgcc compilers: Found system library therefore skipping: -lgcc compilers: Checking arg -no_compact_unwind compilers: Unknown arg -no_compact_unwind compilers: Checking arg -rpath compilers: Checking arg -rpath compilers: Already in rpathflags so skipping: -rpath compilers: Checking arg -rpath compilers: Already in rpathflags so skipping: -rpath compilers: Checking arg -rpath compilers: Already in rpathflags so skipping: -rpath compilers: Checking arg -v compilers: Unknown arg -v compilers: Checking arg @(#)PROGRAM:ld compilers: Unknown arg @(#)PROGRAM:ld compilers: Checking arg PROJECT:ld64-650.9 compilers: Unknown arg PROJECT:ld64-650.9 compilers: Checking arg BUILD compilers: Unknown arg BUILD compilers: Checking arg 13:09:13 compilers: Unknown arg 13:09:13 compilers: Checking arg May compilers: Unknown arg May compilers: Checking arg 28 compilers: Unknown arg 28 compilers: Checking arg 2021 compilers: Unknown arg 2021 compilers: Checking arg configured compilers: Unknown arg configured compilers: Checking arg to compilers: Unknown arg to compilers: Checking arg support compilers: Unknown arg support compilers: Checking arg archs: compilers: Unknown arg archs: compilers: Checking arg armv6 compilers: Unknown arg armv6 compilers: Checking arg armv7 compilers: Unknown arg armv7 compilers: Checking arg armv7s compilers: Unknown arg armv7s compilers: Checking arg arm64 compilers: Unknown arg arm64 compilers: Checking arg arm64e compilers: Unknown arg arm64e compilers: Checking arg arm64_32 compilers: Unknown arg arm64_32 compilers: Checking arg i386 compilers: Unknown arg i386 compilers: Checking arg x86_64 compilers: Unknown arg x86_64 compilers: Checking arg x86_64h compilers: Unknown arg x86_64h compilers: Checking arg armv6m compilers: Unknown arg armv6m compilers: Checking arg armv7k compilers: Unknown arg armv7k compilers: Checking arg armv7m compilers: Unknown arg armv7m compilers: Checking arg armv7em compilers: Unknown arg armv7em compilers: Checking arg Library compilers: Unknown arg Library compilers: Checking arg search compilers: Unknown arg search compilers: Checking arg paths: compilers: Unknown arg paths: compilers: Checking arg /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib compilers: Unknown arg /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib compilers: Checking arg /opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 compilers: Unknown arg /opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 compilers: Checking arg /opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc compilers: Unknown arg /opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc compilers: Checking arg /opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 compilers: Unknown arg /opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 compilers: Checking arg /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/lib compilers: Unknown arg /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/lib compilers: Checking arg Framework compilers: Unknown arg Framework compilers: Checking arg search compilers: Unknown arg search compilers: Checking arg paths: compilers: Unknown arg paths: compilers: Checking arg /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/System/Library/Frameworks/ compilers: Unknown arg /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/System/Library/Frameworks/ compilers: Libraries needed to link Fortran code with the C linker: ['-ldl', '-Wl,-rpath,/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib', '-L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib', '-lmpifort', '-lmpi', '-lpmpi', '-lgfortran', '-Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11', '-L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11', '-Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc', '-L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc', '-Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11', '-L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11', '-lgfortran', '-lgcc_s.1.1', '-lm', '-Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11', '-Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc', '-Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11'] compilers: Libraries needed to link Fortran main with the C linker: [] compilers: Check that Fortran libraries can be used with Fortran as the linker ===== Checking compiler Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.F90 Successful compile: Source: program main end ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.F90 Successful compile: Source: program main end Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -ldl -Wl,-rpath,/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -lmpifort -lmpi -lpmpi -lgfortran -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 -lgfortran -lgcc_s.1.1 -lm -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 -ldl ======== Checking running linked program ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.F90 Successful compile: Source: program main end Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -ldl -Wl,-rpath,/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -lmpifort -lmpi -lpmpi -lgfortran -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 -lgfortran -lgcc_s.1.1 -lm -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 -ldl Testing executable /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest to see if it can be run Executing: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest Running Executable with threads to time it out at 60 Executing: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest compilers: Check that Fortran libraries can be used with C as the linker ===== Checking compiler Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -ldl -Wl,-rpath,/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -lmpifort -lmpi -lpmpi -lgfortran -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 -lgfortran -lgcc_s.1.1 -lm -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 -ldl Possible ERROR while running linker: stderr: ld: warning: dylib (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libmpifort.dylib) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: dylib (/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/libgfortran.dylib) was built for newer macOS version (11.5) than being linked (11.0) Linker output before filtering: ld: warning: dylib (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libmpifort.dylib) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: dylib (/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/libgfortran.dylib) was built for newer macOS version (11.5) than being linked (11.0) : Linker output after filtering: : ======== Checking running linked program ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -ldl -Wl,-rpath,/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -lmpifort -lmpi -lpmpi -lgfortran -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 -lgfortran -lgcc_s.1.1 -lm -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 -ldl Possible ERROR while running linker: stderr: ld: warning: dylib (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libmpifort.dylib) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: dylib (/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/libgfortran.dylib) was built for newer macOS version (11.5) than being linked (11.0) Linker output before filtering: ld: warning: dylib (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libmpifort.dylib) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: dylib (/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/libgfortran.dylib) was built for newer macOS version (11.5) than being linked (11.0) : Linker output after filtering: : Testing executable /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest to see if it can be run Executing: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest Running Executable with threads to time it out at 60 Executing: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest ============================================================================================= TESTING: setupFrameworkCompilers from config.compilers(config/BuildSystem/config/compilers.py:1442) Not checking for library in Download MPICH: [] because no functions given to check for ============================================================================================= TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:167) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names No functions to check for in library [] [] Checking for optional headers [] in Download MPICH: ['/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include'] ============================================================================================= TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files [] in ['/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include'] Found header files [] in ['/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include'] Checking for headers [] in Download MPICH: ['/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include'] ============================================================================================= TESTING: checkVersion from config.packages.MPICH(config/BuildSystem/config/package.py:1079) Uses self.version, self.minversion, self.maxversion, self.versionname, and self.versioninclude to determine if package has required version For mpich unable to find version information since includes and version includes are missing skipping version check ============================================================================================= TESTING: checkSharedLibrary from config.packages.MPICH(config/BuildSystem/config/package.py:1004) By default we don't care about checking if the library is shared child config.packages.MPICH took 7.574215 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.MPI(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: checkDependencies from config.packages.MPI(config/BuildSystem/config/package.py:912) ============================================================================================= TESTING: configureLibrary from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:851) ================================================================================== Checking for a functional MPI Checking for library in Package specific search directory MPI: [] Contents of /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug: ['obj', 'bin', 'include', 'tests', 'lib', 'externalpackages', 'share'] Contents /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/: ['obj', 'bin', 'include', 'tests', 'lib', 'externalpackages', 'share'] ============================================================================================= TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:167) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [MPI_Init MPI_Comm_create] in library [] [] ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Init(); static void _check_MPI_Init() { MPI_Init(); } char MPI_Comm_create(); static void _check_MPI_Comm_create() { MPI_Comm_create(); } int main() { _check_MPI_Init(); _check_MPI_Comm_create();; return 0; } Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.o -ldl ===== Checking compiler Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Init(); static void _check_MPI_Init() { MPI_Init(); } char MPI_Comm_create(); static void _check_MPI_Comm_create() { MPI_Comm_create(); } void dummy(void) {_check_MPI_Init(); _check_MPI_Comm_create();} ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.F90 Successful compile: Source: program main print*,'testing' stop end Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/confc.o -ldl Checking for optional headers [] in Package specific search directory MPI: ['/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include'] ============================================================================================= TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files [] in ['/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include'] Found header files [] in ['/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include'] Checking for headers ['mpi.h'] in Package specific search directory MPI: ['/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include'] ============================================================================================= TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['mpi.h'] in ['/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include'] Checking include with compiler flags var CPPFLAGS ['/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include'] Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.X -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Preprocess output before filtering: : Preprocess output after filtering: : Found header files ['mpi.h'] in ['/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include'] Defined "HAVE_MPI_F90MODULE_VISIBILITY" to "1" ============================================================================================= TESTING: checkMPIDistro from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:658) Determine if MPICH_NUMVERSION, OMPI_MAJOR_VERSION or MSMPI_VER exist in mpi.h Used for consistency checking of MPI installation at compile time ===== Checking compiler Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c Possible ERROR while running compiler: exit code 1 stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c:4:25: error: use of undeclared identifier 'I_MPI_VERSION' const char *mpich_ver = I_MPI_VERSION; ^ 1 error generated. Source: #include "confdefs.h" #include "conffix.h" #include const char *mpich_ver = I_MPI_VERSION; int main() { ; return 0; } ===== Checking compiler Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c Possible ERROR while running compiler: exit code 1 stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c:4:17: error: use of undeclared identifier 'I_MPI_NUMVERSION' int mpich_ver = I_MPI_NUMVERSION; ^ 1 error generated. Source: #include "confdefs.h" #include "conffix.h" #include int mpich_ver = I_MPI_NUMVERSION; int main() { ; return 0; } ===== Checking compiler Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c Possible ERROR while running compiler: exit code 1 stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c:4:17: error: use of undeclared identifier 'MVAPICH2_NUMVERSION' int mpich_ver = MVAPICH2_NUMVERSION; ^ 1 error generated. Source: #include "confdefs.h" #include "conffix.h" #include int mpich_ver = MVAPICH2_NUMVERSION; int main() { ; return 0; } ===== Checking compiler Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int mpich_ver = MPICH_NUMVERSION; int main() { ; return 0; } Preprocessing source: #include "confdefs.h" #include "conffix.h" #include int mpich_ver = MPICH_NUMVERSION; Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.X -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c Defined "HAVE_MPICH_NUMVERSION" to "30402300" ============================================================================================= TESTING: configureMPI2 from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:381) Check for functions added to the interface in MPI-2 ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int a,b,c,d,flag,sendbuf[1]={1},recvbuf[1]={2}; MPI_Datatype newtype; if (MPI_Allreduce(MPI_IN_PLACE,0,1,MPI_INT,MPI_SUM,MPI_COMM_SELF)) return 0; if (MPI_Finalized(&flag)) return 0; if (MPI_Type_dup(MPI_INT,&newtype)) return 0; if (MPI_Exscan(sendbuf,recvbuf,1,MPI_INT,MPI_SUM,MPI_COMM_WORLD)) return 0; if (MPI_Reduce_scatter(sendbuf,recvbuf,sendbuf,MPI_INT,MPI_SUM,MPI_COMM_WORLD)) return 0; if (MPI_Type_get_envelope(MPI_INT,&a,&b,&c,&d)) return 0; ; return 0; } Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.o -ldl ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c Possible ERROR while running compiler: stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c:7:121: warning: if statement has empty body [-Wempty-body] if (MPI_Type_create_struct(count, blocklens, indices, old_types, newtype)); ^ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c:7:121: note: put the semicolon on a separate line to silence this warning 1 warning generated. Source: #include "confdefs.h" #include "conffix.h" #include int main() { int count=2; int blocklens[2]={0,1}; MPI_Aint indices[2]={0,1}; MPI_Datatype old_types[2]={MPI_INT,MPI_DOUBLE}; MPI_Datatype *newtype = 0; if (MPI_Type_create_struct(count, blocklens, indices, old_types, newtype)); ; return 0; } Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.o -ldl ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c Possible ERROR while running compiler: stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c:6:131: warning: if statement has empty body [-Wempty-body] MPI_Comm_errhandler_fn * p_err_fun = 0; MPI_Errhandler * p_errhandler = 0; if (MPI_Comm_create_errhandler(p_err_fun,p_errhandler)); ^ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c:6:131: note: put the semicolon on a separate line to silence this warning 1 warning generated. Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_Comm_errhandler_fn * p_err_fun = 0; MPI_Errhandler * p_errhandler = 0; if (MPI_Comm_create_errhandler(p_err_fun,p_errhandler)); ; return 0; } Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.o -ldl ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c Possible ERROR while running compiler: stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c:6:63: warning: if statement has empty body [-Wempty-body] if (MPI_Comm_set_errhandler(MPI_COMM_WORLD,MPI_ERRORS_RETURN)); ^ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c:6:63: note: put the semicolon on a separate line to silence this warning 1 warning generated. Source: #include "confdefs.h" #include "conffix.h" #include int main() { if (MPI_Comm_set_errhandler(MPI_COMM_WORLD,MPI_ERRORS_RETURN)); ; return 0; } Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.o -ldl ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c Possible ERROR while running compiler: stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c:6:49: warning: if statement has empty body [-Wempty-body] if (MPI_Reduce_local(0, 0, 0, MPI_INT, MPI_SUM));; ^ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c:6:49: note: put the semicolon on a separate line to silence this warning 1 warning generated. Source: #include "confdefs.h" #include "conffix.h" #include int main() { if (MPI_Reduce_local(0, 0, 0, MPI_INT, MPI_SUM));; return 0; } Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.o -ldl Defined "HAVE_MPI_REDUCE_LOCAL" to "1" ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c Possible ERROR while running compiler: stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c:6:102: warning: if statement has empty body [-Wempty-body] char version[MPI_MAX_LIBRARY_VERSION_STRING];int verlen;if (MPI_Get_library_version(version,&verlen)); ^ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c:6:102: note: put the semicolon on a separate line to silence this warning 1 warning generated. Source: #include "confdefs.h" #include "conffix.h" #include int main() { char version[MPI_MAX_LIBRARY_VERSION_STRING];int verlen;if (MPI_Get_library_version(version,&verlen)); ; return 0; } Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.o -ldl Defined "HAVE_MPI_GET_LIBRARY_VERSION" to "1" ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c Possible ERROR while running compiler: stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c:6:94: warning: if statement has empty body [-Wempty-body] int base[100]; MPI_Win win; if (MPI_Win_create(base,100,4,MPI_INFO_NULL,MPI_COMM_WORLD,&win)); ^ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c:6:94: note: put the semicolon on a separate line to silence this warning 1 warning generated. Source: #include "confdefs.h" #include "conffix.h" #include int main() { int base[100]; MPI_Win win; if (MPI_Win_create(base,100,4,MPI_INFO_NULL,MPI_COMM_WORLD,&win)); ; return 0; } Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.o -ldl Defined "HAVE_MPI_WIN_CREATE" to "1" ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c Possible ERROR while running compiler: stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c:6:90: warning: if statement has empty body [-Wempty-body] int ptr[1]; MPI_Win win; if (MPI_Accumulate(ptr,1,MPI_INT,0,0,1,MPI_INT,MPI_REPLACE,win)); ^ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c:6:90: note: put the semicolon on a separate line to silence this warning /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c:6:85: warning: variable 'win' is uninitialized when used here [-Wuninitialized] int ptr[1]; MPI_Win win; if (MPI_Accumulate(ptr,1,MPI_INT,0,0,1,MPI_INT,MPI_REPLACE,win)); ^~~ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c:6:24: note: initialize the variable 'win' to silence this warning int ptr[1]; MPI_Win win; if (MPI_Accumulate(ptr,1,MPI_INT,0,0,1,MPI_INT,MPI_REPLACE,win)); ^ = 0 2 warnings generated. Source: #include "confdefs.h" #include "conffix.h" #include int main() { int ptr[1]; MPI_Win win; if (MPI_Accumulate(ptr,1,MPI_INT,0,0,1,MPI_INT,MPI_REPLACE,win)); ; return 0; } Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.o -ldl Defined "HAVE_MPI_ONE_SIDED" to "1" ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int provided; if (MPI_Init_thread(0,0,MPI_THREAD_FUNNELED,&provided)) return 0;; return 0; } Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.o -ldl Defined "HAVE_MPI_INIT_THREAD" to "1" ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int sendbuf[2] = {1,2}; int recvbuf[1]; if (MPI_Reduce_scatter_block(sendbuf,recvbuf,1,MPI_INT,MPI_SUM,MPI_COMM_WORLD)) return 0; ; return 0; } Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.o -ldl Defined "HAVE_MPI_REDUCE_SCATTER_BLOCK" to "1" ============================================================================================= TESTING: configureMPI3 from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:449) Check for functions added to the interface in MPI-3 ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c Possible ERROR while running compiler: stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c:7:112: warning: if statement has empty body [-Wempty-body] if (MPI_Comm_split_type(MPI_COMM_WORLD, MPI_COMM_TYPE_SHARED, 0, MPI_INFO_NULL, &scomm)); ^ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c:7:112: note: put the semicolon on a separate line to silence this warning /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c:8:111: warning: if statement has empty body [-Wempty-body] if (MPI_Win_allocate_shared(size,disp_unit,MPI_INFO_NULL,MPI_COMM_WORLD,&baseptr,&win)); ^ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c:8:111: note: put the semicolon on a separate line to silence this warning /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c:9:82: warning: if statement has empty body [-Wempty-body] if (MPI_Win_shared_query(win,0,&size,&disp_unit,&baseptr)); ^ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c:9:82: note: put the semicolon on a separate line to silence this warning 3 warnings generated. Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_Comm scomm; MPI_Aint size=128; int disp_unit=8,*baseptr; MPI_Win win; if (MPI_Comm_split_type(MPI_COMM_WORLD, MPI_COMM_TYPE_SHARED, 0, MPI_INFO_NULL, &scomm)); if (MPI_Win_allocate_shared(size,disp_unit,MPI_INFO_NULL,MPI_COMM_WORLD,&baseptr,&win)); if (MPI_Win_shared_query(win,0,&size,&disp_unit,&baseptr)); ; return 0; } Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.o -ldl Defined "HAVE_MPI_PROCESS_SHARED_MEMORY" to "1" ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c Possible ERROR while running compiler: stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c:7:104: warning: if statement has empty body [-Wempty-body] if (MPI_Win_allocate(size,disp_unit,MPI_INFO_NULL,MPI_COMM_WORLD,&baseptr,&win)); ^ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c:7:104: note: put the semicolon on a separate line to silence this warning /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c:8:61: warning: if statement has empty body [-Wempty-body] if (MPI_Win_attach(win,baseptr,size)); ^ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c:8:61: note: put the semicolon on a separate line to silence this warning /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c:9:86: warning: if statement has empty body [-Wempty-body] if (MPI_Win_create_dynamic(MPI_INFO_NULL,MPI_COMM_WORLD,&win)); ^ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c:9:86: note: put the semicolon on a separate line to silence this warning 3 warnings generated. Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_Aint size=128; int disp_unit=8,*baseptr; MPI_Win win; if (MPI_Win_allocate(size,disp_unit,MPI_INFO_NULL,MPI_COMM_WORLD,&baseptr,&win)); if (MPI_Win_attach(win,baseptr,size)); if (MPI_Win_create_dynamic(MPI_INFO_NULL,MPI_COMM_WORLD,&win)); ; return 0; } Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.o -ldl Defined "HAVE_MPI_FEATURE_DYNAMIC_WINDOW" to "1" ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int send=0,recv,counts[2]={1,1},displs[2]={1,2}; MPI_Request req; if (MPI_Iscatter(&send,1,MPI_INT,&recv,1,MPI_INT,0,MPI_COMM_WORLD,&req)) return 0; if (MPI_Iscatterv(&send,counts,displs,MPI_INT,&recv,1,MPI_INT,0,MPI_COMM_WORLD,&req)) return 0; if (MPI_Igather(&send,1,MPI_INT,&recv,1,MPI_INT,0,MPI_COMM_WORLD,&req)) return 0; if (MPI_Igatherv(&send,1,MPI_INT,&recv,counts,displs,MPI_INT,0,MPI_COMM_WORLD,&req)) return 0; if (MPI_Iallgather(&send,1,MPI_INT,&recv,1,MPI_INT,MPI_COMM_WORLD,&req)) return 0; if (MPI_Iallgatherv(&send,1,MPI_INT,&recv,counts,displs,MPI_INT,MPI_COMM_WORLD,&req)) return 0; if (MPI_Ialltoall(&send,1,MPI_INT,&recv,1,MPI_INT,MPI_COMM_WORLD,&req)) return 0; if (MPI_Iallreduce(&send,&recv,1,MPI_INT,MPI_SUM,MPI_COMM_WORLD,&req)) return 0; if (MPI_Ibarrier(MPI_COMM_WORLD,&req)) return 0; ; return 0; } Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.o -ldl Defined "HAVE_MPI_NONBLOCKING_COLLECTIVES" to "1" ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c Possible ERROR while running compiler: stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c:8:145: warning: if statement has empty body [-Wempty-body] if (MPI_Dist_graph_create_adjacent(MPI_COMM_WORLD,0,0,MPI_WEIGHTS_EMPTY,0,0,MPI_WEIGHTS_EMPTY,MPI_INFO_NULL,0,&distcomm)); ^ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c:8:145: note: put the semicolon on a separate line to silence this warning /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c:9:89: warning: if statement has empty body [-Wempty-body] if (MPI_Neighbor_alltoallv(0,0,0,MPI_INT,0,0,0,MPI_INT,distcomm)); ^ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c:9:89: note: put the semicolon on a separate line to silence this warning /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c:10:95: warning: if statement has empty body [-Wempty-body] if (MPI_Ineighbor_alltoallv(0,0,0,MPI_INT,0,0,0,MPI_INT,distcomm,&req)); ^ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c:10:95: note: put the semicolon on a separate line to silence this warning 3 warnings generated. Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_Comm distcomm; MPI_Request req; if (MPI_Dist_graph_create_adjacent(MPI_COMM_WORLD,0,0,MPI_WEIGHTS_EMPTY,0,0,MPI_WEIGHTS_EMPTY,MPI_INFO_NULL,0,&distcomm)); if (MPI_Neighbor_alltoallv(0,0,0,MPI_INT,0,0,0,MPI_INT,distcomm)); if (MPI_Ineighbor_alltoallv(0,0,0,MPI_INT,0,0,0,MPI_INT,distcomm,&req)); ; return 0; } Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.o -ldl Defined "HAVE_MPI_NEIGHBORHOOD_COLLECTIVES" to "1" ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c Possible ERROR while running compiler: stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c:6:104: warning: if statement has empty body [-Wempty-body] int ptr[1]; MPI_Win win; if (MPI_Get_accumulate(ptr,1,MPI_INT,ptr,1,MPI_INT,0,0,1,MPI_INT,MPI_SUM,win)); ^ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c:6:104: note: put the semicolon on a separate line to silence this warning /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c:6:99: warning: variable 'win' is uninitialized when used here [-Wuninitialized] int ptr[1]; MPI_Win win; if (MPI_Get_accumulate(ptr,1,MPI_INT,ptr,1,MPI_INT,0,0,1,MPI_INT,MPI_SUM,win)); ^~~ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c:6:24: note: initialize the variable 'win' to silence this warning int ptr[1]; MPI_Win win; if (MPI_Get_accumulate(ptr,1,MPI_INT,ptr,1,MPI_INT,0,0,1,MPI_INT,MPI_SUM,win)); ^ = 0 2 warnings generated. Source: #include "confdefs.h" #include "conffix.h" #include int main() { int ptr[1]; MPI_Win win; if (MPI_Get_accumulate(ptr,1,MPI_INT,ptr,1,MPI_INT,0,0,1,MPI_INT,MPI_SUM,win)); ; return 0; } Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.o -ldl Defined "HAVE_MPI_GET_ACCUMULATE" to "1" ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c Possible ERROR while running compiler: stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c:6:94: warning: if statement has empty body [-Wempty-body] int ptr[1]; MPI_Win win; MPI_Request req; if (MPI_Rget(ptr,1,MPI_INT,0,1,1,MPI_INT,win,&req)); ^ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c:6:94: note: put the semicolon on a separate line to silence this warning /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c:6:84: warning: variable 'win' is uninitialized when used here [-Wuninitialized] int ptr[1]; MPI_Win win; MPI_Request req; if (MPI_Rget(ptr,1,MPI_INT,0,1,1,MPI_INT,win,&req)); ^~~ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c:6:24: note: initialize the variable 'win' to silence this warning int ptr[1]; MPI_Win win; MPI_Request req; if (MPI_Rget(ptr,1,MPI_INT,0,1,1,MPI_INT,win,&req)); ^ = 0 2 warnings generated. Source: #include "confdefs.h" #include "conffix.h" #include int main() { int ptr[1]; MPI_Win win; MPI_Request req; if (MPI_Rget(ptr,1,MPI_INT,0,1,1,MPI_INT,win,&req)); ; return 0; } Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.o -ldl Defined "HAVE_MPI_RGET" to "1" ============================================================================================= TESTING: configureMPI4 from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:514) Check for functions added to the interface in MPI-4 ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c Possible ERROR while running compiler: stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c:11:11: warning: implicit declaration of function 'MPI_Send_c' is invalid in C99 [-Wimplicit-function-declaration] if (MPI_Send_c(buf,count,MPI_INT,dest,tag,MPI_COMM_WORLD)) return 1; ^ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c:12:11: warning: implicit declaration of function 'MPI_Send_init_c' is invalid in C99 [-Wimplicit-function-declaration] if (MPI_Send_init_c(buf,count,MPI_INT,dest,tag,MPI_COMM_WORLD,&req)) return 1; ^ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c:13:11: warning: implicit declaration of function 'MPI_Isend_c' is invalid in C99 [-Wimplicit-function-declaration] if (MPI_Isend_c(buf,count,MPI_INT,dest,tag,MPI_COMM_WORLD,&req)) return 1; ^ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c:14:11: warning: implicit declaration of function 'MPI_Recv_c' is invalid in C99 [-Wimplicit-function-declaration] if (MPI_Recv_c(buf,count,MPI_INT,source,tag,MPI_COMM_WORLD,&stat)) return 1; ^ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c:15:11: warning: implicit declaration of function 'MPI_Recv_init_c' is invalid in C99 [-Wimplicit-function-declaration] if (MPI_Recv_init_c(buf,count,MPI_INT,source,tag,MPI_COMM_WORLD,&req)) return 1; ^ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c:16:11: warning: implicit declaration of function 'MPI_Irecv_c' is invalid in C99 [-Wimplicit-function-declaration] if (MPI_Irecv_c(buf,count,MPI_INT,source,tag,MPI_COMM_WORLD,&req)) return 1; ^ 6 warnings generated. Source: #include "confdefs.h" #include "conffix.h" #include int main() { int buf[1]={0},dest=1,source=1,tag=0; MPI_Count count=1; MPI_Request req; MPI_Status stat; if (MPI_Send_c(buf,count,MPI_INT,dest,tag,MPI_COMM_WORLD)) return 1; if (MPI_Send_init_c(buf,count,MPI_INT,dest,tag,MPI_COMM_WORLD,&req)) return 1; if (MPI_Isend_c(buf,count,MPI_INT,dest,tag,MPI_COMM_WORLD,&req)) return 1; if (MPI_Recv_c(buf,count,MPI_INT,source,tag,MPI_COMM_WORLD,&stat)) return 1; if (MPI_Recv_init_c(buf,count,MPI_INT,source,tag,MPI_COMM_WORLD,&req)) return 1; if (MPI_Irecv_c(buf,count,MPI_INT,source,tag,MPI_COMM_WORLD,&req)) return 1; ; return 0; } Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.o -ldl Possible ERROR while running linker: exit code 1 stderr: Undefined symbols for architecture arm64: "_MPI_Irecv_c", referenced from: _main in conftest.o "_MPI_Isend_c", referenced from: _main in conftest.o "_MPI_Recv_c", referenced from: _main in conftest.o "_MPI_Recv_init_c", referenced from: _main in conftest.o "_MPI_Send_c", referenced from: _main in conftest.o "_MPI_Send_init_c", referenced from: _main in conftest.o ld: symbol(s) not found for architecture arm64 clang: error: linker command failed with exit code 1 (use -v to see invocation) Linker output before filtering: Undefined symbols for architecture arm64: "_MPI_Irecv_c", referenced from: _main in conftest.o "_MPI_Isend_c", referenced from: _main in conftest.o "_MPI_Recv_c", referenced from: _main in conftest.o "_MPI_Recv_init_c", referenced from: _main in conftest.o "_MPI_Send_c", referenced from: _main in conftest.o "_MPI_Send_init_c", referenced from: _main in conftest.o ld: symbol(s) not found for architecture arm64 clang: error: linker command failed with exit code 1 (use -v to see invocation) : Linker output after filtering: Undefined symbols for architecture arm64: "_MPI_Irecv_c", referenced from: _main in conftest.o "_MPI_Isend_c", referenced from: _main in conftest.o "_MPI_Recv_c", referenced from: _main in conftest.o "_MPI_Recv_init_c", referenced from: _main in conftest.o "_MPI_Send_c", referenced from: _main in conftest.o "_MPI_Send_init_c", referenced from: _main in conftest.o ld: symbol(s) not found for architecture arm64 clang: error: linker command failed with exit code 1 (use -v to see invocation): ============================================================================================= TESTING: configureMPIEXEC from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:190) Checking for location of mpiexec Checking for program /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpiexec...found Checking for program /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpiexec...found Running Executable with threads to time it out at 120 Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpiexec -n 1 printenv stdout: NVM_RC_VERSION= MANPATH=/opt/homebrew/share/man:: TERM_PROGRAM=Apple_Terminal NVM_CD_FLAGS=-q TERM=xterm-256color SHELL=/bin/zsh PIP_PYTHON_PATH=/opt/homebrew/opt/python@3.9/bin/python3.9 TMPDIR=/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/ HOMEBREW_REPOSITORY=/opt/homebrew PETSC_ARCH=arch-darwin-c-debug TERM_PROGRAM_VERSION=440 TERM_SESSION_ID=478C5A76-26CF-4E2F-BADC-7011D02FA2FA ZSH=/Users/veronikaulanova/.oh-my-zsh USER=veronikaulanova NVM_DIR=/Users/veronikaulanova/.nvm SSH_AUTH_SOCK=/private/tmp/com.apple.launchd.qy7nEvOeXV/Listeners __CF_USER_TEXT_ENCODING=0x1F5:0x0:0x2 PYENV_VIRTUALENV_INIT=1 COLUMNS=160 PAGER=less LSCOLORS=Gxfxcxdxbxegedabagacad PATH=/opt/homebrew/Cellar/pyenv-virtualenv/1.1.5/shims:/usr/local/share/python:/opt/homebrew/bin:/usr/local/bin:/usr/bin:/bin:/usr/sbin:/sbin:/Library/TeX/texbin PIPENV_ACTIVE=1 LaunchInstanceID=E6E0262C-B4E6-44EE-9665-0DBA57EA0186 __CFBundleIdentifier=com.apple.Terminal PWD=/Users/veronikaulanova/Documents/documents/Oxford_work/petsc LANG=en_US.UTF-8 XPC_FLAGS=0x0 LINES=50 PYTHONDONTWRITEBYTECODE=1 XPC_SERVICE_NAME=0 HOME=/Users/veronikaulanova SHLVL=3 PYENV_SHELL=zsh HOMEBREW_PREFIX=/opt/homebrew LOGNAME=veronikaulanova LESS=-R PYTHONPATH=/Users/veronikaulanova/.local/share/virtualenvs/Oxford_work-5mk6j8NB/lib/python3.9/site-packages PIP_DISABLE_PIP_VERSION_CHECK=1 HOMEBREW_CELLAR=/opt/homebrew/Cellar INFOPATH=/opt/homebrew/share/info: SECURITYSESSIONID=186b8 PETSC_DIR=/Users/veronikaulanova/Documents/documents/Oxford_work/petsc _=/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpiexec HYDI_CONTROL_FD=8 GFORTRAN_UNBUFFERED_PRECONNECTED=y MPIR_CVAR_CH3_INTERFACE_HOSTNAME=Veronikas-Air MPI_LOCALNRANKS=1 MPI_LOCALRANKID=0 PMI_RANK=0 PMI_FD=4 PMI_SIZE=1 Defined "HAVE_MPIEXEC_ENVIRONMENTAL_VARIABLE" to "MPIR_CVAR_CH3" Defined make macro "MPIEXEC" to "/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpiexec" Checking for program /usr/libexec/ApplicationFirewall/socketfilterfw...found Defined make macro "SOCKETFILTERFW" to "/usr/libexec/ApplicationFirewall/socketfilterfw" Running Executable with threads to time it out at 60 Executing: /usr/libexec/ApplicationFirewall/socketfilterfw --getglobalstate stdout: Firewall is disabled. (State = 0) Checking for program /opt/homebrew/Cellar/pyenv-virtualenv/1.1.5/shims/hostname...not found Checking for program /usr/local/share/python/hostname...not found Checking for program /opt/homebrew/bin/hostname...not found Checking for program /usr/local/bin/hostname...not found Checking for program /usr/bin/hostname...not found Checking for program /bin/hostname...found Defined make macro "HOSTNAME" to "hostname" Running Executable with threads to time it out at 60 Executing: hostname stdout: Veronikas-Air Return code from hostname: 0 Hostname works, running network checks Checking for program /sbin/ping...found Defined make macro "PING" to "/sbin/ping" Executing: uname -s stdout: Darwin Running Executable with threads to time it out at 60 Executing: /sbin/ping -c 2 Veronikas-Air stdout: PING veronikas-air.home (192.168.0.10): 56 data bytes 64 bytes from 192.168.0.10: icmp_seq=0 ttl=64 time=0.081 ms 64 bytes from 192.168.0.10: icmp_seq=1 ttl=64 time=0.123 ms --- veronikas-air.home ping statistics --- 2 packets transmitted, 2 packets received, 0.0% packet loss round-trip min/avg/max/stddev = 0.081/0.102/0.123/0.021 ms Return code from ping: 0 ============================================================================================= ======== Checking running linked program ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_Init(0,0); MPI_Finalize(); ; return 0; } Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.o -ldl Testing executable /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest to see if it can be run Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpiexec -n 1 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest Running Executable with threads to time it out at 120 Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpiexec -n 1 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest ============================================================================================= TESTING: configureMPITypes from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:542) Checking for MPI Datatype handles ===== Checking compiler Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include int main() { int size; int ierr; MPI_Init(0,0); ierr = MPI_Type_size(MPI_LONG_DOUBLE, &size); if(ierr || (size == 0)) exit(1); MPI_Finalize(); ; return 0; } Defined "HAVE_MPI_LONG_DOUBLE" to "1" ===== Checking compiler Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include int main() { int size; int ierr; MPI_Init(0,0); ierr = MPI_Type_size(MPI_INT64_T, &size); if(ierr || (size == 0)) exit(1); MPI_Finalize(); ; return 0; } Defined "HAVE_MPI_INT64_T" to "1" ============================================================================================= TESTING: SGIMPICheck from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:586) Returns true if SGI MPI is used Checking for functions [MPI_SGI_barrier] in library [] [] ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_SGI_barrier(); static void _check_MPI_SGI_barrier() { MPI_SGI_barrier(); } int main() { _check_MPI_SGI_barrier();; return 0; } Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.o -ldl Possible ERROR while running linker: exit code 1 stderr: Undefined symbols for architecture arm64: "_MPI_SGI_barrier", referenced from: __check_MPI_SGI_barrier in conftest.o ld: symbol(s) not found for architecture arm64 clang: error: linker command failed with exit code 1 (use -v to see invocation) Linker output before filtering: Undefined symbols for architecture arm64: "_MPI_SGI_barrier", referenced from: __check_MPI_SGI_barrier in conftest.o ld: symbol(s) not found for architecture arm64 clang: error: linker command failed with exit code 1 (use -v to see invocation) : Linker output after filtering: Undefined symbols for architecture arm64: "_MPI_SGI_barrier", referenced from: __check_MPI_SGI_barrier in conftest.o ld: symbol(s) not found for architecture arm64 clang: error: linker command failed with exit code 1 (use -v to see invocation): SGI MPI test failure ============================================================================================= TESTING: CxxMPICheck from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:596) Make sure C++ can compile and link ============================================================================================= TESTING: FortranMPICheck from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:612) Make sure fortran include [mpif.h] and library symbols are found Checking for fortran mpi_init() Checking for functions [] in library [] [] ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.F90 Successful compile: Source: program main #include "mpif.h" integer ierr call mpi_init(ierr) end Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.o -ldl Checking for mpi.mod Checking for functions [] in library [] [] ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.F90 Successful compile: Source: program main use mpi integer(kind=selected_int_kind(5)) ierr,rank call mpi_init(ierr) call mpi_comm_rank(MPI_COMM_WORLD,rank,ierr) end Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.o -ldl Defined "HAVE_MPI_F90MODULE" to "1" ============================================================================================= TESTING: configureIO from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:634) Check for the functions in MPI/IO - Define HAVE_MPIIO if they are present - Some older MPI 1 implementations are missing these ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c Possible ERROR while running compiler: stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c:7:48: warning: if statement has empty body [-Wempty-body] if (MPI_Type_get_extent(MPI_INT, &lb, &extent)); ^ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c:7:48: note: put the semicolon on a separate line to silence this warning /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c:12:54: warning: if statement has empty body [-Wempty-body] if (MPI_File_write_all(fh, buf, 1, MPI_INT, &status)); ^ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c:12:54: note: put the semicolon on a separate line to silence this warning /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c:14:102: warning: if statement has empty body [-Wempty-body] if (MPI_File_read_all(fh, buf, 1, MPI_INT, &status)); ^ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c:14:102: note: put the semicolon on a separate line to silence this warning /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c:18:61: warning: if statement has empty body [-Wempty-body] if (MPI_File_set_view(fh, disp, MPI_INT, MPI_INT, "", info)); ^ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c:18:61: note: put the semicolon on a separate line to silence this warning /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c:20:101: warning: if statement has empty body [-Wempty-body] if (MPI_File_open(MPI_COMM_SELF, "", 0, info, &fh)); ^ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c:20:101: note: put the semicolon on a separate line to silence this warning /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c:22:74: warning: if statement has empty body [-Wempty-body] if (MPI_File_close(&fh)); ^ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c:22:74: note: put the semicolon on a separate line to silence this warning /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c:18:55: warning: variable 'info' is uninitialized when used here [-Wuninitialized] if (MPI_File_set_view(fh, disp, MPI_INT, MPI_INT, "", info)); ^~~~ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c:17:14: note: initialize the variable 'info' to silence this warning MPI_Info info; ^ = 0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c:12:24: warning: variable 'fh' is uninitialized when used here [-Wuninitialized] if (MPI_File_write_all(fh, buf, 1, MPI_INT, &status)); ^~ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c:9:61: note: initialize the variable 'fh' to silence this warning MPI_File fh; ^ = 0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c:18:27: warning: variable 'disp' is uninitialized when used here [-Wuninitialized] if (MPI_File_set_view(fh, disp, MPI_INT, MPI_INT, "", info)); ^~~~ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c:16:65: note: initialize the variable 'disp' to silence this warning MPI_Offset disp; ^ = 0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c:14:76: warning: variable 'buf' is uninitialized when used here [-Wuninitialized] if (MPI_File_read_all(fh, buf, 1, MPI_INT, &status)); ^~~ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c:10:10: note: initialize the variable 'buf' to silence this warning void *buf; ^ = 0 10 warnings generated. Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_Aint lb, extent; if (MPI_Type_get_extent(MPI_INT, &lb, &extent)); MPI_File fh; void *buf; MPI_Status status; if (MPI_File_write_all(fh, buf, 1, MPI_INT, &status)); if (MPI_File_read_all(fh, buf, 1, MPI_INT, &status)); MPI_Offset disp; MPI_Info info; if (MPI_File_set_view(fh, disp, MPI_INT, MPI_INT, "", info)); if (MPI_File_open(MPI_COMM_SELF, "", 0, info, &fh)); if (MPI_File_close(&fh)); ; return 0; } Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.o -ldl Defined "HAVE_MPIIO" to "1" ============================================================================================= TESTING: findMPIIncludeAndLib from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:747) Find MPI include paths and libraries from "mpicc -show" or Cray "cc --cray-print-opts=cflags/libs" and save. ============================================================================================= TESTING: PetscArchMPICheck from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:826) mpi.h found in build dir! Checking if its a bad copy. Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.X -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c mpi_h_line: # 1 "/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include/mpi.h" 1 Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.X -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c mpi_h_line: # 1 "/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include/mpi.h" 1 ===== Checking compiler Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c Possible ERROR while running compiler: stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c:6:5: warning: unused variable 'combiner' [-Wunused-variable] int combiner = MPI_COMBINER_DUP;; ^ 1 warning generated. Source: #include "confdefs.h" #include "conffix.h" #include int main() { int combiner = MPI_COMBINER_DUP;; return 0; } Defined "HAVE_MPI_COMBINER_DUP" to "1" ===== Checking compiler Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c Possible ERROR while running compiler: stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c:6:5: warning: unused variable 'combiner' [-Wunused-variable] int combiner = MPI_COMBINER_CONTIGUOUS;; ^ 1 warning generated. Source: #include "confdefs.h" #include "conffix.h" #include int main() { int combiner = MPI_COMBINER_CONTIGUOUS;; return 0; } Defined "HAVE_MPI_COMBINER_CONTIGUOUS" to "1" ===== Checking compiler Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c Possible ERROR while running compiler: stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c:6:5: warning: unused variable 'combiner' [-Wunused-variable] int combiner = MPI_COMBINER_NAMED;; ^ 1 warning generated. Source: #include "confdefs.h" #include "conffix.h" #include int main() { int combiner = MPI_COMBINER_NAMED;; return 0; } Defined "HAVE_MPI_COMBINER_NAMED" to "1" ============================================================================================= TESTING: checkVersion from config.packages.MPI(config/BuildSystem/config/package.py:1079) Uses self.version, self.minversion, self.maxversion, self.versionname, and self.versioninclude to determine if package has required version Preprocessing source: #include "confdefs.h" #include "conffix.h" #include "mpi.h" #define PetscXstr_(s) PetscStr_(s) #define PetscStr_(s) #s char *ver = "petscpkgver(" PetscXstr_(MPI_VERSION) ")"; Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.X -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI/conftest.c Found version string: char*ver=petscpkgver(3) For mpi need 2 <= 3 <= ============================================================================================= TESTING: checkSharedLibrary from config.packages.MPI(config/BuildSystem/config/package.py:1004) By default we don't care about checking if the library is shared child config.packages.MPI took 5.102550 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.zstd(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.zstd(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.zstd took 0.000649 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.yaml(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.yaml(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.yaml took 0.000396 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.ssl(config/BuildSystem/config/packages/ssl.py:31) ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.ssl(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.ssl took 0.000744 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.sprng(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.sprng(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.sprng took 0.000401 seconds PETSc clone, checking for Sowing Checking for program /opt/homebrew/Cellar/pyenv-virtualenv/1.1.5/shims/pdflatex...not found Checking for program /usr/local/share/python/pdflatex...not found Checking for program /opt/homebrew/bin/pdflatex...not found Checking for program /usr/local/bin/pdflatex...not found Checking for program /usr/bin/pdflatex...not found Checking for program /bin/pdflatex...not found Checking for program /usr/sbin/pdflatex...not found Checking for program /sbin/pdflatex...not found Checking for program /Library/TeX/texbin/pdflatex...found Defined make macro "PDFLATEX" to "/Library/TeX/texbin/pdflatex" Checking for program /opt/homebrew/Cellar/pyenv-virtualenv/1.1.5/shims/bfort...not found Checking for program /usr/local/share/python/bfort...not found Checking for program /opt/homebrew/bin/bfort...not found Checking for program /usr/local/bin/bfort...not found Checking for program /usr/bin/bfort...not found Checking for program /bin/bfort...not found Checking for program /usr/sbin/bfort...not found Checking for program /sbin/bfort...not found Checking for program /Library/TeX/texbin/bfort...not found Checking for program /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/lib/petsc/bin/win32fe/bfort...not found Checking for program /opt/homebrew/Cellar/pyenv-virtualenv/1.1.5/shims/doctext...not found Checking for program /usr/local/share/python/doctext...not found Checking for program /opt/homebrew/bin/doctext...not found Checking for program /usr/local/bin/doctext...not found Checking for program /usr/bin/doctext...not found Checking for program /bin/doctext...not found Checking for program /usr/sbin/doctext...not found Checking for program /sbin/doctext...not found Checking for program /Library/TeX/texbin/doctext...not found Checking for program /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/lib/petsc/bin/win32fe/doctext...not found Checking for program /opt/homebrew/Cellar/pyenv-virtualenv/1.1.5/shims/mapnames...not found Checking for program /usr/local/share/python/mapnames...not found Checking for program /opt/homebrew/bin/mapnames...not found Checking for program /usr/local/bin/mapnames...not found Checking for program /usr/bin/mapnames...not found Checking for program /bin/mapnames...not found Checking for program /usr/sbin/mapnames...not found Checking for program /sbin/mapnames...not found Checking for program /Library/TeX/texbin/mapnames...not found Checking for program /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/lib/petsc/bin/win32fe/mapnames...not found Checking for program /opt/homebrew/Cellar/pyenv-virtualenv/1.1.5/shims/bib2html...not found Checking for program /usr/local/share/python/bib2html...not found Checking for program /opt/homebrew/bin/bib2html...not found Checking for program /usr/local/bin/bib2html...not found Checking for program /usr/bin/bib2html...not found Checking for program /bin/bib2html...not found Checking for program /usr/sbin/bib2html...not found Checking for program /sbin/bib2html...not found Checking for program /Library/TeX/texbin/bib2html...not found Checking for program /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/lib/petsc/bin/win32fe/bib2html...not found Bfort not found. Installing sowing for FortranStubs ============================================================================================= TESTING: consistencyChecks from config.packages.sowing(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: checkDependencies from config.packages.sowing(config/BuildSystem/config/package.py:912) ============================================================================================= TESTING: configureLibrary from config.packages.sowing(config/BuildSystem/config/package.py:937) Find an installation and check if it can work with PETSc ================================================================================== Checking for a functional sowing Looking for SOWING at git.sowing, hg.sowing or a directory starting with ['petsc-pkg-sowing'] Found a copy of SOWING in git.sowing Executing: ['git', 'rev-parse', '--git-dir'] stdout: .git Executing: ['git', 'cat-file', '-e', 'v1.1.26-p4^{commit}'] Executing: ['git', 'rev-parse', 'v1.1.26-p4'] stdout: 80e9c1fed0c7992071c00d6b71dab7641c5ece5d Executing: ['git', '-c', 'user.name=petsc-configure', '-c', 'user.email=petsc@configure', 'stash'] stdout: No local changes to save Executing: ['git', 'clean', '-f', '-d', '-x'] stdout: Removing pkg.gitcommit Removing sowing.petscconf Executing: ['git', 'checkout', '-f', '80e9c1fed0c7992071c00d6b71dab7641c5ece5d'] Makefile /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/petsc/conf/pkg.conf.sowing has correct checksum Commit file /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/petsc/conf/pkg.gitcommit.sowing has correct checksum Do not need to rebuild SOWING Not checking for library in Download SOWING: [] because no functions given to check for ============================================================================================= TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:167) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names No functions to check for in library [] [] Checking for optional headers [] in Download SOWING: ['/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include'] ============================================================================================= TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files [] in ['/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include'] Found header files [] in ['/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include'] Checking for headers [] in Download SOWING: ['/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include'] ============================================================================================= TESTING: checkVersion from config.packages.sowing(config/BuildSystem/config/package.py:1079) Uses self.version, self.minversion, self.maxversion, self.versionname, and self.versioninclude to determine if package has required version For sowing unable to find version information since includes and version includes are missing skipping version check ============================================================================================= TESTING: checkSharedLibrary from config.packages.sowing(config/BuildSystem/config/package.py:1004) By default we don't care about checking if the library is shared Checking for program /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/bfort...found Defined make macro "BFORT" to "/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/bfort" Checking for program /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/doctext...found Defined make macro "DOCTEXT" to "/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/doctext" Checking for program /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mapnames...found Defined make macro "MAPNAMES" to "/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mapnames" Checking for program /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/bib2html...found Defined make macro "BIB2HTML" to "/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/bib2html" Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/bfort -version stdout: bfort (sowing) release 1.1.26 of Date unknown ============================================================================================= Running arch-darwin-c-debug/bin/bfort to generate fortran stubs ============================================================================================= child config.packages.sowing took 4.627204 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.revolve(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.revolve(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.revolve took 0.000979 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.radau5(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.radau5(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.radau5 took 0.000808 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.pami(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.pami(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.pami took 0.000416 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.opengles(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.opengles(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.opengles took 0.005650 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.opencl(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.opencl(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.opencl took 0.001837 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.muparser(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.muparser(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.muparser took 0.000940 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.mpe(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.mpe(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.mpe took 0.001615 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.memkind(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.memkind(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.memkind took 0.000468 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.libmesh(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.libmesh(config/BuildSystem/config/packages/libmesh.py:69) Defined make rule "libmesh-build" with dependencies "" and code [] Defined make rule "libmesh-install" with dependencies "" and code [] child config.packages.libmesh took 0.001022 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.moose(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.moose(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.moose took 0.000457 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.libjpeg(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.libjpeg(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.libjpeg took 0.001737 seconds Checking for program /opt/homebrew/Cellar/pyenv-virtualenv/1.1.5/shims/lgrind...not found Checking for program /usr/local/share/python/lgrind...not found Checking for program /opt/homebrew/bin/lgrind...not found Checking for program /usr/local/bin/lgrind...not found Checking for program /usr/bin/lgrind...not found Checking for program /bin/lgrind...not found Checking for program /usr/sbin/lgrind...not found Checking for program /sbin/lgrind...not found Checking for program /Library/TeX/texbin/lgrind...not found Checking for program /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/lib/petsc/bin/win32fe/lgrind...not found child config.packages.lgrind took 0.000989 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.gsl(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.gsl(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.gsl took 0.000751 seconds child config.packages.gmsh took 0.000057 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.gmp(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.gmp(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.gmp took 0.000481 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.mpfr(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.mpfr(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.mpfr took 0.000430 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.giflib(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.giflib(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.giflib took 0.000473 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.cub(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.cub(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.cub took 0.000436 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.ctetgen(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.ctetgen(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.ctetgen took 0.000463 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.concurrencykit(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.concurrencykit(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.concurrencykit took 0.000423 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.cams(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.cams(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.cams took 0.000465 seconds ============================================================================================= TESTING: locateC2html from config.packages.c2html(config/BuildSystem/config/packages/c2html.py:30) Looking for default C2html executable Checking for program /opt/homebrew/Cellar/pyenv-virtualenv/1.1.5/shims/c2html...not found Checking for program /usr/local/share/python/c2html...not found Checking for program /opt/homebrew/bin/c2html...not found Checking for program /usr/local/bin/c2html...not found Checking for program /usr/bin/c2html...not found Checking for program /bin/c2html...not found Checking for program /usr/sbin/c2html...not found Checking for program /sbin/c2html...not found Checking for program /Library/TeX/texbin/c2html...not found Checking for program /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/lib/petsc/bin/win32fe/c2html...not found child config.packages.c2html took 0.000754 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.boost(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.boost(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.boost took 0.000467 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.silo(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.silo(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.silo took 0.000503 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.Random123(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.Random123(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.Random123 took 0.000436 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.PARTY(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.PARTY(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.PARTY took 0.000455 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.NVSHMEM(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.NVSHMEM(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.NVSHMEM took 0.000381 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.Matlab(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.Matlab(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.Matlab took 0.000386 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.MatlabEngine(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.MatlabEngine(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.MatlabEngine took 0.000392 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.Mathematica(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.Mathematica(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.Mathematica took 0.000427 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.regex(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: checkDependencies from config.packages.regex(config/BuildSystem/config/package.py:912) ============================================================================================= TESTING: configureLibrary from config.packages.regex(config/BuildSystem/config/package.py:937) Find an installation and check if it can work with PETSc ================================================================================== Checking for a functional regex Checking for library in Compiler specific search REGEX: [] ============================================================================================= TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:167) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [regexec regcomp regfree] in library [] [] ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char regexec(); static void _check_regexec() { regexec(); } char regcomp(); static void _check_regcomp() { regcomp(); } char regfree(); static void _check_regfree() { regfree(); } int main() { _check_regexec(); _check_regcomp(); _check_regfree();; return 0; } Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.o -ldl ===== Checking compiler Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char regexec(); static void _check_regexec() { regexec(); } char regcomp(); static void _check_regcomp() { regcomp(); } char regfree(); static void _check_regfree() { regfree(); } void dummy(void) {_check_regexec(); _check_regcomp(); _check_regfree();} ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.F90 Successful compile: Source: program main print*,'testing' stop end Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/confc.o -ldl Checking for optional headers [] in Compiler specific search REGEX: ['/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include'] ============================================================================================= TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files [] in ['/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include'] Found header files [] in ['/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include'] Checking for headers ['regex.h'] in Compiler specific search REGEX: ['/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include'] ============================================================================================= TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['regex.h'] in ['/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include'] Checking include with compiler flags var CPPFLAGS ['/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include'] Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.X -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Preprocess output before filtering: : Preprocess output after filtering: : Found header files ['regex.h'] in ['/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include'] ============================================================================================= TESTING: checkVersion from config.packages.regex(config/BuildSystem/config/package.py:1079) Uses self.version, self.minversion, self.maxversion, self.versionname, and self.versioninclude to determine if package has required version ============================================================================================= TESTING: checkSharedLibrary from config.packages.regex(config/BuildSystem/config/package.py:1004) By default we don't care about checking if the library is shared child config.packages.regex took 0.345627 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.libceed(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.libceed(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.libceed took 0.000775 seconds Defined "PYTHON_EXE" to ""/opt/homebrew/opt/python@3.9/bin/python3.9"" Executing: /opt/homebrew/opt/python@3.9/bin/python3.9 -c "import Cython" Executing: /opt/homebrew/opt/python@3.9/bin/python3.9 -c "import numpy" child config.packages.python took 0.152463 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.petsc4py(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: checkDependencies from config.packages.petsc4py(config/BuildSystem/config/package.py:912) ============================================================================================= TESTING: configureLibrary from config.packages.petsc4py(config/BuildSystem/config/packages/petsc4py.py:118) Executing: uname -s stdout: Darwin Detected Darwin/MacOSX OS Executing: uname -s stdout: Darwin Detected Darwin/MacOSX OS Executing: uname -p stdout: arm Detected ARM processor Defined "HAVE_PETSC4PY" to "1" Defined "PETSC4PY_INSTALL_PATH" to ""/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib"" Defined make macro "PETSC4PY" to "yes" Defined make rule "petsc4pybuild" with dependencies "" and code ['@echo "*** Building petsc4py ***"', '@${RM} -f ${PETSC_ARCH}/lib/petsc/conf/petsc4py.errorflg', '@(cd src/binding/petsc4py && \\\n MPICC=${PCC} ARCHFLAGS=\'-arch arm64\' /opt/homebrew/opt/python@3.9/bin/python3.9 setup.py build ) || \\\n (echo "**************************ERROR*************************************" && \\\n echo "Error building petsc4py." && \\\n echo "********************************************************************" && \\\n touch ${PETSC_ARCH}/lib/petsc/conf/petsc4py.errorflg && \\\n exit 1)'] Defined make rule "petsc4pyinstall" with dependencies "" and code ['@echo "*** Installing petsc4py ***"', '@(MPICC=${PCC} && export MPICC && cd src/binding/petsc4py && \\\n MPICC=${PCC} ARCHFLAGS=\'-arch arm64\' /opt/homebrew/opt/python@3.9/bin/python3.9 setup.py install --install-lib=/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib \\\n $(if $(DESTDIR),--root=\'$(DESTDIR)\') ) || \\\n (echo "**************************ERROR*************************************" && \\\n echo "Error building petsc4py." && \\\n echo "********************************************************************" && \\\n exit 1)', '@echo "====================================="', '@echo "To use petsc4py, add /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib to PYTHONPATH"', '@echo "====================================="'] Defined make macro "PETSC4PY_NP" to "4" Defined make rule "petsc4pytest" with dependencies "" and code ['@echo "*** Testing petsc4py on ${PETSC4PY_NP} processes ***"', '@PYTHONPATH=/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib:${PETSC_MPI4PY_PYTHONPATH}:${PYTHONPATH} PETSC_OPTIONS="{PETSC_OPTIONS} -check_pointer_intensity 0 -error_output_stdout -malloc_dump ${PETSC_TEST_OPTIONS}" ${MPIEXEC} -n ${PETSC4PY_NP} /opt/homebrew/opt/python@3.9/bin/python3.9 src/binding/petsc4py/test/runtests.py --verbose', '@echo "====================================="'] Defined make rule "petsc4py-build" with dependencies "petsc4pybuild petsc4pyinstall" and code [] Defined make rule "petsc4py-install" with dependencies "" and code [] ============================================================================================= TESTING: checkSharedLibrary from config.packages.petsc4py(config/BuildSystem/config/package.py:1004) By default we don't care about checking if the library is shared child config.packages.petsc4py took 0.013783 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.mpi4py(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.mpi4py(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.mpi4py took 0.000462 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.opengl(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.opengl(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.opengl took 0.000560 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.glut(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.glut(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.glut took 0.000399 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.GLVis(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.GLVis(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.GLVis took 0.000532 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.CoDiPack(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.CoDiPack(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.CoDiPack took 0.000427 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.adblaslapack(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.adblaslapack(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.adblaslapack took 0.000439 seconds child config.packages.cxxlibs took 0.000008 seconds ============================================================================================= TESTING: locateCMake from config.packages.cmake(config/BuildSystem/config/packages/cmake.py:51) Looking for default CMake executable Checking for program /opt/homebrew/Cellar/pyenv-virtualenv/1.1.5/shims/cmake...not found Checking for program /usr/local/share/python/cmake...not found Checking for program /opt/homebrew/bin/cmake...not found Checking for program /usr/local/bin/cmake...not found Checking for program /usr/bin/cmake...not found Checking for program /bin/cmake...not found Checking for program /usr/sbin/cmake...not found Checking for program /sbin/cmake...not found Checking for program /Library/TeX/texbin/cmake...not found Checking for program /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/lib/petsc/bin/win32fe/cmake...not found Looking for default CTest executable Checking for program /opt/homebrew/Cellar/pyenv-virtualenv/1.1.5/shims/ctest...not found Checking for program /usr/local/share/python/ctest...not found Checking for program /opt/homebrew/bin/ctest...not found Checking for program /usr/local/bin/ctest...not found Checking for program /usr/bin/ctest...not found Checking for program /bin/ctest...not found Checking for program /usr/sbin/ctest...not found Checking for program /sbin/ctest...not found Checking for program /Library/TeX/texbin/ctest...not found Checking for program /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/lib/petsc/bin/win32fe/ctest...not found cmake not found child config.packages.cmake took 0.000906 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.unittestcpp(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.unittestcpp(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.unittestcpp took 0.000426 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.googletest(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.googletest(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.googletest took 0.000434 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.opencascade(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.opencascade(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.opencascade took 0.000416 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.eigen(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.eigen(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.eigen took 0.000516 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.szlib(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.szlib(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.szlib took 0.000422 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.zlib(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.zlib(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.zlib took 0.000429 seconds child config.packages.mathlib took 0.000011 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.tetgen(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.tetgen(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.tetgen took 0.000420 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.tchem(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.tchem(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.tchem took 0.000437 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.saws(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.saws(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.saws took 0.000443 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.libpng(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.libpng(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.libpng took 0.000420 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.hcephes(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.hcephes(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.hcephes took 0.000424 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.combblas(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.combblas(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.combblas took 0.000438 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.Triangle(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.Triangle(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.Triangle took 0.000412 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.metis(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.metis(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.metis took 0.000434 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.pragmatic(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.pragmatic(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.pragmatic took 0.000420 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.parmetis(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.parmetis(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.parmetis took 0.000427 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.KS(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.KS(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.KS took 0.000413 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.Chaco(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.Chaco(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.Chaco took 0.000411 seconds Executing: uname -s stdout: Darwin ============================================================================================= TESTING: consistencyChecks from config.packages.hdf5(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.hdf5(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.hdf5 took 0.005036 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.med(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.med(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.med took 0.000407 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.cgns(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.cgns(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.cgns took 0.000362 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.ascem-io(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.ascem-io(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.ascem-io took 0.000402 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.pflotran(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.pflotran(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.pflotran took 0.000397 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.alquimia(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.alquimia(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.alquimia took 0.000393 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.SAMRAI(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.SAMRAI(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.SAMRAI took 0.000411 seconds child config.packages.flibs took 0.000007 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.pnetcdf(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.pnetcdf(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.pnetcdf took 0.000395 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.netcdf(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.netcdf(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.netcdf took 0.000395 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.exodusii(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.exodusii(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.exodusii took 0.000396 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.fblaslapack(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: checkDependencies from config.packages.fblaslapack(config/BuildSystem/config/package.py:912) ============================================================================================= TESTING: configureLibrary from config.packages.fblaslapack(config/BuildSystem/config/packages/fblaslapack.py:19) ================================================================================== Checking for a functional fblaslapack Looking for FBLASLAPACK at git.fblaslapack, hg.fblaslapack or a directory starting with ['petsc-pkg-fblaslapack'] Found a copy of FBLASLAPACK in git.fblaslapack Executing: ['git', 'rev-parse', '--git-dir'] stdout: .git Executing: ['git', 'cat-file', '-e', 'v3.4.2-p3^{commit}'] Executing: ['git', 'rev-parse', 'v3.4.2-p3'] stdout: e8a03f57d64cf01d987d4b4ce9b961c24765747d Executing: ['git', '-c', 'user.name=petsc-configure', '-c', 'user.email=petsc@configure', 'stash'] stdout: No local changes to save Executing: ['git', 'clean', '-f', '-d', '-x'] stdout: Removing pkg.gitcommit Removing tmpmakefile Executing: ['git', 'checkout', '-f', 'e8a03f57d64cf01d987d4b4ce9b961c24765747d'] Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 -qversion Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 -V Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 --version stdout: GNU Fortran (Homebrew GCC 11.2.0_3) 11.2.0 Copyright (C) 2021 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. Detected GFortran100plus compiler Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Output from compiling with -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 -O0 Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 -mfp16-format=ieee /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Possible ERROR while running compiler: exit code 1 stderr: clang: error: unknown argument: '-mfp16-format=ieee' Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Output from compiling with -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 -mfp16-format=ieee Rejecting compiler flag -mfp16-format=ieee due to nonzero status from link Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 -V Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 --version stdout: GNU Fortran (Homebrew GCC 11.2.0_3) 11.2.0 Copyright (C) 2021 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. Detected GFortran100plus compiler Makefile /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/petsc/conf/pkg.conf.fblaslapack has correct checksum Commit file /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/petsc/conf/pkg.gitcommit.fblaslapack has correct checksum Do not need to rebuild FBLASLAPACK Not checking for library in Download FBLASLAPACK: [] because no functions given to check for ============================================================================================= TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:167) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names No functions to check for in library [] [] Checking for optional headers [] in Download FBLASLAPACK: ['/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include'] ============================================================================================= TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files [] in ['/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include'] Found header files [] in ['/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include'] Checking for headers [] in Download FBLASLAPACK: ['/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include'] ============================================================================================= TESTING: checkVersion from config.packages.fblaslapack(config/BuildSystem/config/package.py:1079) Uses self.version, self.minversion, self.maxversion, self.versionname, and self.versioninclude to determine if package has required version ============================================================================================= TESTING: checkSharedLibrary from config.packages.fblaslapack(config/BuildSystem/config/package.py:1004) By default we don't care about checking if the library is shared child config.packages.fblaslapack took 0.203836 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.pthread(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: checkDependencies from config.packages.pthread(config/BuildSystem/config/package.py:912) ============================================================================================= TESTING: configureLibrary from config.packages.pthread(config/BuildSystem/config/packages/pthread.py:20) Checks for pthread_barrier_t, cpu_set_t, and sys/sysctl.h ================================================================================== Checking for a functional pthread Checking for library in Compiler specific search PTHREAD: [] ============================================================================================= TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:167) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [pthread_create] in library [] [] ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char pthread_create(); static void _check_pthread_create() { pthread_create(); } int main() { _check_pthread_create();; return 0; } Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.o -ldl ===== Checking compiler Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char pthread_create(); static void _check_pthread_create() { pthread_create(); } void dummy(void) {_check_pthread_create();} ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.F90 Successful compile: Source: program main print*,'testing' stop end Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/confc.o -ldl Checking for optional headers [] in Compiler specific search PTHREAD: ['/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include'] ============================================================================================= TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files [] in ['/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include'] Found header files [] in ['/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include'] Checking for headers ['pthread.h'] in Compiler specific search PTHREAD: ['/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include'] ============================================================================================= TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['pthread.h'] in ['/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include'] Checking include with compiler flags var CPPFLAGS ['/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include'] Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.X -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers/conftest.c Preprocess output before filtering: : Preprocess output after filtering: : Found header files ['pthread.h'] in ['/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include'] ===== Checking compiler Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.pthread/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.pthread -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.pthread/conftest.c Possible ERROR while running compiler: exit code 1 stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.pthread/conftest.c:6:1: error: use of undeclared identifier 'pthread_barrier_t' pthread_barrier_t *a; ^ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.pthread/conftest.c:6:20: error: use of undeclared identifier 'a' pthread_barrier_t *a; ^ 2 errors generated. Source: #include "confdefs.h" #include "conffix.h" #include int main() { pthread_barrier_t *a; ; return 0; } ===== Checking compiler Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.pthread/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.pthread -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.pthread/conftest.c Possible ERROR while running compiler: exit code 1 stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.pthread/conftest.c:6:1: error: use of undeclared identifier 'cpu_set_t' cpu_set_t *a; ^ /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.pthread/conftest.c:6:12: error: use of undeclared identifier 'a' cpu_set_t *a; ^ 2 errors generated. Source: #include "confdefs.h" #include "conffix.h" #include int main() { cpu_set_t *a; ; return 0; } Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -E -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.X -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.pthread /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.pthread/conftest.c Preprocess output before filtering: : Preprocess output after filtering: : Defined "HAVE_SYS_SYSCTL_H" to "1" ============================================================================================= TESTING: checkVersion from config.packages.pthread(config/BuildSystem/config/package.py:1079) Uses self.version, self.minversion, self.maxversion, self.versionname, and self.versioninclude to determine if package has required version ============================================================================================= TESTING: checkSharedLibrary from config.packages.pthread(config/BuildSystem/config/package.py:1004) By default we don't care about checking if the library is shared child config.packages.pthread took 0.502171 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.egads(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.egads(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.egads took 0.000716 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.PTScotch(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.PTScotch(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.PTScotch took 0.000469 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.mmg(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.mmg(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.mmg took 0.000559 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.parmmg(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.parmmg(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.parmmg took 0.000573 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.Zoltan(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.Zoltan(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.Zoltan took 0.000462 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.ADIOS(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.ADIOS(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.ADIOS took 0.000503 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.openmp(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.openmp(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.openmp took 0.000445 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.viennacl(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.viennacl(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.viennacl took 0.000445 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.ColPack(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.ColPack(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.ColPack took 0.000482 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.ADOLC(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.ADOLC(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.ADOLC took 0.000489 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.openblas(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.openblas(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.openblas took 0.000454 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.blis(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.blis(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.blis took 0.000478 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.f2cblaslapack(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.f2cblaslapack(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.f2cblaslapack took 0.000466 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.BlasLapack(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: checkDependencies from config.packages.BlasLapack(config/BuildSystem/config/package.py:912) ============================================================================================= TESTING: configureLibrary from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:494) ================================================================================ Checking for BLAS and LAPACK in fblaslapack ============================================================================================= TESTING: checkLib from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:109) Checking for BLAS and LAPACK symbols Checking for Fortran name mangling underscore on BLAS/LAPACK Checking for functions [ddot_] in library ['/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a'] ['-ldl', '-Wl,-rpath,/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib', '-L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib', '-lmpifort', '-lmpi', '-lpmpi', '-lgfortran', '-Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11', '-L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11', '-Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc', '-L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc', '-Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11', '-L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11', '-lgfortran', '-lgcc_s.1.1', '-lm', '-Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11', '-Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc', '-Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11'] Checking directory of requested libraries:/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib for first library:libfblas. Files in directory:['libpetsc.3.16.3.dylib.dSYM', 'libpmpi.12.dylib', 'pkgconfig', 'libmpi.la', 'libmpi.12.dylib', 'libopa.dylib', 'libfmpich.dylib', 'libmpicxx.dylib', 'libmpi.a', 'libpmpi.la', 'libmpichcxx.dylib', 'libpmpi.a', 'libmpifort.12.dylib', 'libpmpi.dylib', 'libpetsc.3.16.3.dylib', '.DIR', 'libmpl.dylib', 'petsc4py-3.16.3-py3.9.egg-info', 'libmpifort.dylib', 'libpetsc.3.17.dylib', 'libmpichf90.dylib', 'libmpifort.la', 'libflapack.a', 'petsc', 'libmpicxx.a', 'libpetsc.3.17.0.dylib.dSYM', 'petsc4py', 'libmpich.dylib', 'libmpifort.a', 'libmpicxx.12.dylib', 'libpetsc.dylib', 'libmpi.dylib', 'libfblas.a', 'libmpicxx.la', 'libpetsc.3.16.dylib', 'libpetsc.3.17.0.dylib'] ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.pthread -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char ddot_(); static void _check_ddot_() { ddot_(); } int main() { _check_ddot_();; return 0; } Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.o -Wl,-rpath,/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -lfblas -ldl -Wl,-rpath,/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -lmpifort -lmpi -lpmpi -lgfortran -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 -lgfortran -lgcc_s.1.1 -lm -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 -ldl Possible ERROR while running linker: stderr: ld: warning: dylib (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libmpifort.dylib) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: dylib (/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/libgfortran.dylib) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a(ddot.o)) was built for newer macOS version (11.5) than being linked (11.0) Linker output before filtering: ld: warning: dylib (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libmpifort.dylib) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: dylib (/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/libgfortran.dylib) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a(ddot.o)) was built for newer macOS version (11.5) than being linked (11.0) : Linker output after filtering: : ===== Checking compiler Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.pthread -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char ddot_(); static void _check_ddot_() { ddot_(); } void dummy(void) {_check_ddot_();} ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.F90 Successful compile: Source: program main print*,'testing' stop end Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/confc.o -Wl,-rpath,/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -lfblas -ldl -Wl,-rpath,/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -lmpifort -lmpi -lpmpi -lgfortran -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 -lgfortran -lgcc_s.1.1 -lm -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 -ldl Defined "HAVE_LIBFBLAS" to "1" Checking for functions [dgetrs_] in library ['/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a'] ['/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a', '-ldl', '-Wl,-rpath,/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib', '-L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib', '-lmpifort', '-lmpi', '-lpmpi', '-lgfortran', '-Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11', '-L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11', '-Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc', '-L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc', '-Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11', '-L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11', '-lgfortran', '-lgcc_s.1.1', '-lm', '-Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11', '-Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc', '-Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11'] Checking directory of requested libraries:/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib for first library:libflapack. Files in directory:['libpetsc.3.16.3.dylib.dSYM', 'libpmpi.12.dylib', 'pkgconfig', 'libmpi.la', 'libmpi.12.dylib', 'libopa.dylib', 'libfmpich.dylib', 'libmpicxx.dylib', 'libmpi.a', 'libpmpi.la', 'libmpichcxx.dylib', 'libpmpi.a', 'libmpifort.12.dylib', 'libpmpi.dylib', 'libpetsc.3.16.3.dylib', '.DIR', 'libmpl.dylib', 'petsc4py-3.16.3-py3.9.egg-info', 'libmpifort.dylib', 'libpetsc.3.17.dylib', 'libmpichf90.dylib', 'libmpifort.la', 'libflapack.a', 'petsc', 'libmpicxx.a', 'libpetsc.3.17.0.dylib.dSYM', 'petsc4py', 'libmpich.dylib', 'libmpifort.a', 'libmpicxx.12.dylib', 'libpetsc.dylib', 'libmpi.dylib', 'libfblas.a', 'libmpicxx.la', 'libpetsc.3.16.dylib', 'libpetsc.3.17.0.dylib'] ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.pthread -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dgetrs_(); static void _check_dgetrs_() { dgetrs_(); } int main() { _check_dgetrs_();; return 0; } Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.o -Wl,-rpath,/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -lflapack -Wl,-rpath,/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -lfblas -ldl -Wl,-rpath,/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -lmpifort -lmpi -lpmpi -lgfortran -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 -lgfortran -lgcc_s.1.1 -lm -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 -ldl Possible ERROR while running linker: stderr: ld: warning: dylib (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libmpifort.dylib) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: dylib (/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/libgfortran.dylib) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dgetrs.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlaswp.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a(dtrsm.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a(lsame.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a(xerbla.o)) was built for newer macOS version (11.5) than being linked (11.0) Linker output before filtering: ld: warning: dylib (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libmpifort.dylib) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: dylib (/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/libgfortran.dylib) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dgetrs.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlaswp.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a(dtrsm.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a(lsame.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a(xerbla.o)) was built for newer macOS version (11.5) than being linked (11.0) : Linker output after filtering: : ===== Checking compiler Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.pthread -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dgetrs_(); static void _check_dgetrs_() { dgetrs_(); } void dummy(void) {_check_dgetrs_();} ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.F90 Successful compile: Source: program main print*,'testing' stop end Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/confc.o -Wl,-rpath,/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -lflapack -Wl,-rpath,/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -lfblas -ldl -Wl,-rpath,/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -lmpifort -lmpi -lpmpi -lgfortran -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 -lgfortran -lgcc_s.1.1 -lm -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 -ldl Defined "HAVE_LIBFLAPACK" to "1" Checking for functions [dgeev_] in library ['/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a'] ['/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a', '-ldl', '-Wl,-rpath,/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib', '-L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib', '-lmpifort', '-lmpi', '-lpmpi', '-lgfortran', '-Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11', '-L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11', '-Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc', '-L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc', '-Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11', '-L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11', '-lgfortran', '-lgcc_s.1.1', '-lm', '-Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11', '-Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc', '-Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11'] Checking directory of requested libraries:/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib for first library:libflapack. Files in directory:['libpetsc.3.16.3.dylib.dSYM', 'libpmpi.12.dylib', 'pkgconfig', 'libmpi.la', 'libmpi.12.dylib', 'libopa.dylib', 'libfmpich.dylib', 'libmpicxx.dylib', 'libmpi.a', 'libpmpi.la', 'libmpichcxx.dylib', 'libpmpi.a', 'libmpifort.12.dylib', 'libpmpi.dylib', 'libpetsc.3.16.3.dylib', '.DIR', 'libmpl.dylib', 'petsc4py-3.16.3-py3.9.egg-info', 'libmpifort.dylib', 'libpetsc.3.17.dylib', 'libmpichf90.dylib', 'libmpifort.la', 'libflapack.a', 'petsc', 'libmpicxx.a', 'libpetsc.3.17.0.dylib.dSYM', 'petsc4py', 'libmpich.dylib', 'libmpifort.a', 'libmpicxx.12.dylib', 'libpetsc.dylib', 'libmpi.dylib', 'libfblas.a', 'libmpicxx.la', 'libpetsc.3.16.dylib', 'libpetsc.3.17.0.dylib'] ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.pthread -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dgeev_(); static void _check_dgeev_() { dgeev_(); } int main() { _check_dgeev_();; return 0; } Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.o -Wl,-rpath,/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -lflapack -Wl,-rpath,/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -lfblas -ldl -Wl,-rpath,/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -lmpifort -lmpi -lpmpi -lgfortran -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 -lgfortran -lgcc_s.1.1 -lm -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 -ldl Possible ERROR while running linker: stderr: ld: warning: dylib (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libmpifort.dylib) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: dylib (/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/libgfortran.dylib) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dgeev.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dgebak.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dgebal.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dgehrd.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dhseqr.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlabad.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlacpy.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlamch.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlange.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlapy2.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlartg.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlascl.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a(dnrm2.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dorghr.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a(drot.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a(dscal.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dtrevc.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a(idamax.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(ilaenv.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a(lsame.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a(xerbla.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a(daxpy.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a(dcopy.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a(ddot.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dgehd2.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a(dgemm.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a(dgemv.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(disnan.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlahqr.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlahr2.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlaln2.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlaqr0.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlarfb.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlaset.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlassq.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dorgqr.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a(dswap.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a(dtrmm.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(ieeeck.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(iparmq.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dladiv.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlaisnan.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlanv2.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlaqr3.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlaqr4.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlaqr5.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlarf.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlarfg.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlarft.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dorg2r.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a(dtrmv.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a(dger.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlaqr1.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlaqr2.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dormhr.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dtrexc.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(iladlc.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(iladlr.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlaexc.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dormqr.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlarfx.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlasy2.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dorm2r.o)) was built for newer macOS version (11.5) than being linked (11.0) Linker output before filtering: ld: warning: dylib (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libmpifort.dylib) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: dylib (/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/libgfortran.dylib) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dgeev.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dgebak.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dgebal.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dgehrd.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dhseqr.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlabad.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlacpy.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlamch.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlange.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlapy2.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlartg.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlascl.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a(dnrm2.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dorghr.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a(drot.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a(dscal.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dtrevc.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a(idamax.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(ilaenv.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a(lsame.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a(xerbla.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a(daxpy.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a(dcopy.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a(ddot.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dgehd2.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a(dgemm.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a(dgemv.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(disnan.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlahqr.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlahr2.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlaln2.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlaqr0.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlarfb.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlaset.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlassq.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dorgqr.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a(dswap.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a(dtrmm.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(ieeeck.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(iparmq.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dladiv.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlaisnan.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlanv2.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlaqr3.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlaqr4.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlaqr5.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlarf.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlarfg.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlarft.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dorg2r.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a(dtrmv.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a(dger.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlaqr1.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlaqr2.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dormhr.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dtrexc.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(iladlc.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(iladlr.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlaexc.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dormqr.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlarfx.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlasy2.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dorm2r.o)) was built for newer macOS version (11.5) than being linked (11.0) : Linker output after filtering: : ===== Checking compiler Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.pthread -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dgeev_(); static void _check_dgeev_() { dgeev_(); } void dummy(void) {_check_dgeev_();} ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.F90 Successful compile: Source: program main print*,'testing' stop end Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/confc.o -Wl,-rpath,/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -lflapack -Wl,-rpath,/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -lfblas -ldl -Wl,-rpath,/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -lmpifort -lmpi -lpmpi -lgfortran -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 -lgfortran -lgcc_s.1.1 -lm -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 -ldl Defined "HAVE_LIBFLAPACK" to "1" Found Fortran mangling on BLAS/LAPACK which is underscore Defined "BLASLAPACK_UNDERSCORE" to "1" ============================================================================================= TESTING: checklsame from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:673) Do the BLAS/LAPACK libraries have a valid lsame() function with correct binding. Checking for functions [lsame_] in library ['/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a', '/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a', '-ldl', '-Wl,-rpath,/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib', '-L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib', '-lmpifort', '-lmpi', '-lpmpi', '-lgfortran', '-Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11', '-L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11', '-Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc', '-L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc', '-Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11', '-L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11', '-lgfortran', '-lgcc_s.1.1', '-lm', '-Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11', '-Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc', '-Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11'] [] Checking directory of requested libraries:/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib for first library:libflapack. Files in directory:['libpetsc.3.16.3.dylib.dSYM', 'libpmpi.12.dylib', 'pkgconfig', 'libmpi.la', 'libmpi.12.dylib', 'libopa.dylib', 'libfmpich.dylib', 'libmpicxx.dylib', 'libmpi.a', 'libpmpi.la', 'libmpichcxx.dylib', 'libpmpi.a', 'libmpifort.12.dylib', 'libpmpi.dylib', 'libpetsc.3.16.3.dylib', '.DIR', 'libmpl.dylib', 'petsc4py-3.16.3-py3.9.egg-info', 'libmpifort.dylib', 'libpetsc.3.17.dylib', 'libmpichf90.dylib', 'libmpifort.la', 'libflapack.a', 'petsc', 'libmpicxx.a', 'libpetsc.3.17.0.dylib.dSYM', 'petsc4py', 'libmpich.dylib', 'libmpifort.a', 'libmpicxx.12.dylib', 'libpetsc.dylib', 'libmpi.dylib', 'libfblas.a', 'libmpicxx.la', 'libpetsc.3.16.dylib', 'libpetsc.3.17.0.dylib'] ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.pthread -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char lsame_(); static void _check_lsame_() { lsame_(); } int main() { _check_lsame_();; return 0; } Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.o -Wl,-rpath,/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -lflapack -Wl,-rpath,/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -lfblas -ldl -Wl,-rpath,/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -lmpifort -lmpi -lpmpi -lgfortran -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 -lgfortran -lgcc_s.1.1 -lm -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 -ldl Possible ERROR while running linker: stderr: ld: warning: dylib (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libmpifort.dylib) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: dylib (/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/libgfortran.dylib) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a(lsame.o)) was built for newer macOS version (11.5) than being linked (11.0) Linker output before filtering: ld: warning: dylib (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libmpifort.dylib) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: dylib (/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/libgfortran.dylib) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a(lsame.o)) was built for newer macOS version (11.5) than being linked (11.0) : Linker output after filtering: : ===== Checking compiler Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.pthread -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char lsame_(); static void _check_lsame_() { lsame_(); } void dummy(void) {_check_lsame_();} ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.F90 Successful compile: Source: program main print*,'testing' stop end Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/conftest.o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers/confc.o -Wl,-rpath,/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -lflapack -Wl,-rpath,/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -lfblas -ldl -Wl,-rpath,/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -lmpifort -lmpi -lpmpi -lgfortran -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 -lgfortran -lgcc_s.1.1 -lm -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 -ldl Defined "HAVE_LIBFLAPACK" to "1" Defined "HAVE_LIBFBLAS" to "1" Defined "HAVE_LIBDL" to "1" Defined "HAVE_LIBMPIFORT" to "1" Defined "HAVE_LIBMPI" to "1" Defined "HAVE_LIBPMPI" to "1" Defined "HAVE_LIBGFORTRAN" to "1" Defined "HAVE_LIBGFORTRAN" to "1" Defined "HAVE_LIBGCC_S_1_1" to "1" Defined "HAVE_LIBM" to "1" ===== Checking compiler Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.pthread -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" char *dgeev_(void); char* testroutine(void){return dgeev_(); } ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.pthread -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" char *dgeev_(void); char* testroutine(void){return dgeev_(); } Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/libconftest.dylib -dynamiclib -single_module -undefined dynamic_lookup -multiply_defined suppress -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers/conftest.o -Wl,-rpath,/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 -lflapack -lfblas -lflapack -lfblas -ldl -lmpifort -lmpi -lpmpi -lgfortran -lgcc_s.1.1 -lm -ldl Possible ERROR while running linker: stderr: ld: warning: dylib (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libmpifort.dylib) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: dylib (/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/libgfortran.dylib) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dgeev.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dgebak.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dgebal.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dgehrd.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dhseqr.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlabad.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlacpy.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlamch.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlange.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlapy2.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlartg.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlascl.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a(dnrm2.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dorghr.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a(drot.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a(dscal.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dtrevc.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a(idamax.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(ilaenv.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a(lsame.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a(xerbla.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a(daxpy.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a(dcopy.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a(ddot.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dgehd2.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a(dgemm.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a(dgemv.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(disnan.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlahqr.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlahr2.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlaln2.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlaqr0.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlarfb.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlaset.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlassq.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dorgqr.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a(dswap.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a(dtrmm.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(ieeeck.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(iparmq.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dladiv.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlaisnan.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlanv2.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlaqr3.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlaqr4.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlaqr5.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlarf.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlarfg.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlarft.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dorg2r.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a(dtrmv.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a(dger.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlaqr1.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlaqr2.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dormhr.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dtrexc.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(iladlc.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(iladlr.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlaexc.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dormqr.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlarfx.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlasy2.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dorm2r.o)) was built for newer macOS version (11.5) than being linked (11.0) Linker output before filtering: ld: warning: dylib (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libmpifort.dylib) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: dylib (/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/libgfortran.dylib) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dgeev.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dgebak.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dgebal.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dgehrd.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dhseqr.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlabad.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlacpy.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlamch.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlange.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlapy2.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlartg.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlascl.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a(dnrm2.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dorghr.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a(drot.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a(dscal.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dtrevc.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a(idamax.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(ilaenv.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a(lsame.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a(xerbla.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a(daxpy.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a(dcopy.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a(ddot.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dgehd2.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a(dgemm.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a(dgemv.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(disnan.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlahqr.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlahr2.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlaln2.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlaqr0.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlarfb.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlaset.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlassq.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dorgqr.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a(dswap.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a(dtrmm.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(ieeeck.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(iparmq.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dladiv.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlaisnan.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlanv2.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlaqr3.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlaqr4.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlaqr5.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlarf.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlarfg.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlarft.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dorg2r.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a(dtrmv.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a(dger.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlaqr1.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlaqr2.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dormhr.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dtrexc.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(iladlc.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(iladlr.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlaexc.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dormqr.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlarfx.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dlasy2.o)) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libflapack.a(dorm2r.o)) was built for newer macOS version (11.5) than being linked (11.0) : Linker output after filtering: : ============================================================================================= TESTING: checkRuntimeIssues from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:732) Determines if BLAS/LAPACK routines use 32 or 64 bit integers 32 bit blas indices based on the BLAS/LAPACK library being used Checking if sdot() returns a float or a double ======== Checking running linked program ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.BlasLapack/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.pthread -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.BlasLapack -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.BlasLapack/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #include #include int main() { FILE *output = fopen("runtimetestoutput","w"); extern float sdot_(const int*,const float*,const int *,const float*,const int*); float x1[1] = {3.0}; int one1 = 1; long long int ione1 = 1; float sdotresult = 0; int blasint64 = 0; if (!blasint64) { sdotresult = sdot_(&one1,x1,&one1,x1,&one1); } else { sdotresult = sdot_((const int*)&ione1,x1,(const int*)&ione1,x1,(const int*)&ione1); } fprintf(output, "--known-sdot-returns-double=%d",sdotresult != 9); ; return 0; } Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.BlasLapack/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.BlasLapack/conftest.o -Wl,-rpath,/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -lflapack -Wl,-rpath,/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -lfblas -ldl -Wl,-rpath,/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -lmpifort -lmpi -lpmpi -lgfortran -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 -lgfortran -lgcc_s.1.1 -lm -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 -ldl Possible ERROR while running linker: stderr: ld: warning: dylib (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libmpifort.dylib) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: dylib (/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/libgfortran.dylib) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a(sdot.o)) was built for newer macOS version (11.5) than being linked (11.0) Linker output before filtering: ld: warning: dylib (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libmpifort.dylib) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: dylib (/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/libgfortran.dylib) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a(sdot.o)) was built for newer macOS version (11.5) than being linked (11.0) : Linker output after filtering: : Testing executable /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.BlasLapack/conftest to see if it can be run Executing: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.BlasLapack/conftest Running Executable with threads to time it out at 60 Executing: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.BlasLapack/conftest Checking for sdot() return double: result 0 Checking if snrm() returns a float or a double ======== Checking running linked program ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.BlasLapack/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.pthread -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.BlasLapack -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.BlasLapack/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #include #include int main() { FILE *output = fopen("runtimetestoutput","w"); extern float snrm2_(const int*,const float*,const int*); float x2[1] = {3.0}; int one2 = 1; long long int ione2 = 1; float normresult = 0; int blasint64 = 0; if (!blasint64) { normresult = snrm2_(&one2,x2,&one2); } else { normresult = snrm2_((const int*)&ione2,x2,(const int*)&ione2); } fprintf(output, "--known-snrm2-returns-double=%d",normresult != 3); ; return 0; } Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.BlasLapack/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.BlasLapack/conftest.o -Wl,-rpath,/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -lflapack -Wl,-rpath,/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -lfblas -ldl -Wl,-rpath,/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -lmpifort -lmpi -lpmpi -lgfortran -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 -lgfortran -lgcc_s.1.1 -lm -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 -ldl Possible ERROR while running linker: stderr: ld: warning: dylib (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libmpifort.dylib) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: dylib (/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/libgfortran.dylib) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a(snrm2.o)) was built for newer macOS version (11.5) than being linked (11.0) Linker output before filtering: ld: warning: dylib (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libmpifort.dylib) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: dylib (/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/libgfortran.dylib) was built for newer macOS version (11.5) than being linked (11.0) ld: warning: object file (/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib/libfblas.a(snrm2.o)) was built for newer macOS version (11.5) than being linked (11.0) : Linker output after filtering: : Testing executable /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.BlasLapack/conftest to see if it can be run Executing: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.BlasLapack/conftest Running Executable with threads to time it out at 60 Executing: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.BlasLapack/conftest Checking for snrm2() return double: result 0 ============================================================================================= TESTING: checkVersion from config.packages.BlasLapack(config/BuildSystem/config/package.py:1079) Uses self.version, self.minversion, self.maxversion, self.versionname, and self.versioninclude to determine if package has required version ============================================================================================= TESTING: checkSharedLibrary from config.packages.BlasLapack(config/BuildSystem/config/package.py:1004) By default we don't care about checking if the library is shared child config.packages.BlasLapack took 2.500858 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.sundials2(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.sundials2(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.sundials2 took 0.000914 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.spai(config/BuildSystem/config/packages/spai.py:53) ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.spai(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.spai took 0.001254 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.raja(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.raja(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.raja took 0.000779 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.pARMS(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.pARMS(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.pARMS took 0.000812 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.p4est(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.p4est(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.p4est took 0.000731 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.mkl_sparse_optimize(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: checkDependencies from config.packages.mkl_sparse_optimize(config/BuildSystem/config/package.py:912) ============================================================================================= TESTING: configureLibrary from config.packages.mkl_sparse_optimize(config/BuildSystem/config/packages/mkl_sparse_optimize.py:48) ============================================================================================= TESTING: checkVersion from config.packages.mkl_sparse_optimize(config/BuildSystem/config/package.py:1079) Uses self.version, self.minversion, self.maxversion, self.versionname, and self.versioninclude to determine if package has required version ============================================================================================= TESTING: checkSharedLibrary from config.packages.mkl_sparse_optimize(config/BuildSystem/config/package.py:1004) By default we don't care about checking if the library is shared child config.packages.mkl_sparse_optimize took 0.001125 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.mkl_sparse(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: checkDependencies from config.packages.mkl_sparse(config/BuildSystem/config/package.py:912) ============================================================================================= TESTING: configureLibrary from config.packages.mkl_sparse(config/BuildSystem/config/packages/mkl_sparse.py:21) ============================================================================================= TESTING: checkVersion from config.packages.mkl_sparse(config/BuildSystem/config/package.py:1079) Uses self.version, self.minversion, self.maxversion, self.versionname, and self.versioninclude to determine if package has required version ============================================================================================= TESTING: checkSharedLibrary from config.packages.mkl_sparse(config/BuildSystem/config/package.py:1004) By default we don't care about checking if the library is shared child config.packages.mkl_sparse took 0.001057 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.mkl_cpardiso(config/BuildSystem/config/packages/mkl_cpardiso.py:20) ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.mkl_cpardiso(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.mkl_cpardiso took 0.000959 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.kokkos(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.kokkos(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.kokkos took 0.000718 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.kokkos-kernels(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.kokkos-kernels(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.kokkos-kernels took 0.000751 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.htool(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.htool(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.htool took 0.000754 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.magma(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.magma(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.magma took 0.000710 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.kblas(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.kblas(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.kblas took 0.000732 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.h2opus(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.h2opus(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.h2opus took 0.000641 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.fftw(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.fftw(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.fftw took 0.000684 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.elemental(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.elemental(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.elemental took 0.000656 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.ml(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.ml(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.ml took 0.000656 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.mkl_pardiso(config/BuildSystem/config/packages/mkl_pardiso.py:21) ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.mkl_pardiso(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.mkl_pardiso took 0.000808 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.SuperLU_DIST(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.SuperLU_DIST(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.SuperLU_DIST took 0.000679 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.SuperLU(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.SuperLU(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.SuperLU took 0.000676 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.PaStiX(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.PaStiX(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.PaStiX took 0.000659 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.scalapack(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.scalapack(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.scalapack took 0.000665 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.strumpack(config/BuildSystem/config/packages/strumpack.py:65) ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.strumpack(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.strumpack took 0.001107 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.MUMPS(config/BuildSystem/config/packages/MUMPS.py:59) ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.MUMPS(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.MUMPS took 0.001219 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.MOAB(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.MOAB(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.MOAB took 0.000701 seconds Executing: uname -s stdout: Darwin ============================================================================================= TESTING: consistencyChecks from config.packages.SuiteSparse(config/BuildSystem/config/packages/SuiteSparse.py:176) ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.SuiteSparse(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.SuiteSparse took 0.005686 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.Chombo(config/BuildSystem/config/packages/Chombo.py:130) ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.Chombo(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.Chombo took 0.000909 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.hypre(config/BuildSystem/config/packages/hypre.py:176) ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.hypre(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.hypre took 0.000868 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.Trilinos(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.Trilinos(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.Trilinos took 0.000635 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.xSDKTrilinos(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.xSDKTrilinos(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.xSDKTrilinos took 0.000554 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.mstk(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.mstk(config/BuildSystem/config/package.py:1008) Called if --with-packagename=0; does nothing by default child config.packages.mstk took 0.000600 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.slepc(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.slepc(config/BuildSystem/config/packages/slepc.py:97) Defined make rule "slepc-build" with dependencies "" and code [] Defined make rule "slepc-install" with dependencies "" and code [] child config.packages.slepc took 0.001040 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.hpddm(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.hpddm(config/BuildSystem/config/packages/hpddm.py:109) Defined make rule "hpddm-build" with dependencies "" and code [] Defined make rule "hpddm-install" with dependencies "" and code [] child config.packages.hpddm took 0.000949 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.bamg(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.bamg(config/BuildSystem/config/packages/bamg.py:86) Defined make rule "bamg-build" with dependencies "" and code [] Defined make rule "bamg-install" with dependencies "" and code [] child config.packages.bamg took 0.000894 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.MFEM(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.MFEM(config/BuildSystem/config/packages/MFEM.py:217) Defined make rule "mfem-build" with dependencies "" and code [] Defined make rule "mfem-install" with dependencies "" and code [] child config.packages.MFEM took 0.000748 seconds ============================================================================================= TESTING: consistencyChecks from config.packages.AMReX(config/BuildSystem/config/package.py:1012) Checks run on the system and currently installed packages that need to be correct for the package now being configured ============================================================================================= TESTING: alternateConfigureLibrary from config.packages.AMReX(config/BuildSystem/config/packages/AMReX.py:151) Defined make rule "amrex-build" with dependencies "" and code [] Defined make rule "amrex-install" with dependencies "" and code [] child config.packages.AMReX took 0.000903 seconds ============================================================================================= TESTING: configureRTLDDefault from PETSc.Configure(config/PETSc/Configure.py:709) ===== Checking compiler Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.pthread -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.BlasLapack -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include void *ptr = RTLD_DEFAULT; int main() { ; return 0; } Defined "RTLD_DEFAULT" to "1" ============================================================================================= TESTING: configurePrefetch from PETSc.Configure(config/PETSc/Configure.py:527) Sees if there are any prefetch functions supported Executing: uname -s stdout: Darwin ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.pthread -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.BlasLapack -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure/conftest.c Possible ERROR while running compiler: exit code 1 stderr: In file included from /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure/conftest.c:3: In file included from /Library/Developer/CommandLineTools/usr/lib/clang/12.0.5/include/xmmintrin.h:13: /Library/Developer/CommandLineTools/usr/lib/clang/12.0.5/include/mmintrin.h:50:12: error: invalid conversion between vector type '__m64' (vector of 1 'long long' value) and integer type 'int' of different size return (__m64)__builtin_ia32_vec_init_v2si(__i, 0); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /Library/Developer/CommandLineTools/usr/lib/clang/12.0.5/include/mmintrin.h:129:12: error: invalid conversion between vector type '__m64' (vector of 1 'long long' value) and integer type 'int' of different size return (__m64)__builtin_ia32_packsswb((__v4hi)__m1, (__v4hi)__m2); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /Library/Developer/CommandLineTools/usr/lib/clang/12.0.5/include/mmintrin.h:159:12: error: invalid conversion between vector type '__m64' (vector of 1 'long long' value) and integer type 'int' of different size return (__m64)__builtin_ia32_packssdw((__v2si)__m1, (__v2si)__m2); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /Library/Developer/CommandLineTools/usr/lib/clang/12.0.5/include/mmintrin.h:189:12: error: invalid conversion between vector type '__m64' (vector of 1 'long long' value) and integer type 'int' of different size return (__m64)__builtin_ia32_packuswb((__v4hi)__m1, (__v4hi)__m2); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /Library/Developer/CommandLineTools/usr/lib/clang/12.0.5/include/mmintrin.h:216:12: error: invalid conversion between vector type '__m64' (vector of 1 'long long' value) and integer type 'int' of different size return (__m64)__builtin_ia32_punpckhbw((__v8qi)__m1, (__v8qi)__m2); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /Library/Developer/CommandLineTools/usr/lib/clang/12.0.5/include/mmintrin.h:239:12: error: invalid conversion between vector type '__m64' (vector of 1 'long long' value) and integer type 'int' of different size return (__m64)__builtin_ia32_punpckhwd((__v4hi)__m1, (__v4hi)__m2); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /Library/Developer/CommandLineTools/usr/lib/clang/12.0.5/include/mmintrin.h:260:12: error: invalid conversion between vector type '__m64' (vector of 1 'long long' value) and integer type 'int' of different size return (__m64)__builtin_ia32_punpckhdq((__v2si)__m1, (__v2si)__m2); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /Library/Developer/CommandLineTools/usr/lib/clang/12.0.5/include/mmintrin.h:287:12: error: invalid conversion between vector type '__m64' (vector of 1 'long long' value) and integer type 'int' of different size return (__m64)__builtin_ia32_punpcklbw((__v8qi)__m1, (__v8qi)__m2); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /Library/Developer/CommandLineTools/usr/lib/clang/12.0.5/include/mmintrin.h:310:12: error: invalid conversion between vector type '__m64' (vector of 1 'long long' value) and integer type 'int' of different size return (__m64)__builtin_ia32_punpcklwd((__v4hi)__m1, (__v4hi)__m2); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /Library/Developer/CommandLineTools/usr/lib/clang/12.0.5/include/mmintrin.h:331:12: error: invalid conversion between vector type '__m64' (vector of 1 'long long' value) and integer type 'int' of different size return (__m64)__builtin_ia32_punpckldq((__v2si)__m1, (__v2si)__m2); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /Library/Developer/CommandLineTools/usr/lib/clang/12.0.5/include/mmintrin.h:352:12: error: invalid conversion between vector type '__m64' (vector of 1 'long long' value) and integer type 'int' of different size return (__m64)__builtin_ia32_paddb((__v8qi)__m1, (__v8qi)__m2); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /Library/Developer/CommandLineTools/usr/lib/clang/12.0.5/include/mmintrin.h:373:12: error: invalid conversion between vector type '__m64' (vector of 1 'long long' value) and integer type 'int' of different size return (__m64)__builtin_ia32_paddw((__v4hi)__m1, (__v4hi)__m2); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /Library/Developer/CommandLineTools/usr/lib/clang/12.0.5/include/mmintrin.h:394:12: error: invalid conversion between vector type '__m64' (vector of 1 'long long' value) and integer type 'int' of different size return (__m64)__builtin_ia32_paddd((__v2si)__m1, (__v2si)__m2); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /Library/Developer/CommandLineTools/usr/lib/clang/12.0.5/include/mmintrin.h:416:12: error: invalid conversion between vector type '__m64' (vector of 1 'long long' value) and integer type 'int' of different size return (__m64)__builtin_ia32_paddsb((__v8qi)__m1, (__v8qi)__m2); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /Library/Developer/CommandLineTools/usr/lib/clang/12.0.5/include/mmintrin.h:439:12: error: invalid conversion between vector type '__m64' (vector of 1 'long long' value) and integer type 'int' of different size return (__m64)__builtin_ia32_paddsw((__v4hi)__m1, (__v4hi)__m2); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /Library/Developer/CommandLineTools/usr/lib/clang/12.0.5/include/mmintrin.h:461:12: error: invalid conversion between vector type '__m64' (vector of 1 'long long' value) and integer type 'int' of different size return (__m64)__builtin_ia32_paddusb((__v8qi)__m1, (__v8qi)__m2); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /Library/Developer/CommandLineTools/usr/lib/clang/12.0.5/include/mmintrin.h:483:12: error: invalid conversion between vector type '__m64' (vector of 1 'long long' value) and integer type 'int' of different size return (__m64)__builtin_ia32_paddusw((__v4hi)__m1, (__v4hi)__m2); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /Library/Developer/CommandLineTools/usr/lib/clang/12.0.5/include/mmintrin.h:504:12: error: invalid conversion between vector type '__m64' (vector of 1 'long long' value) and integer type 'int' of different size return (__m64)__builtin_ia32_psubb((__v8qi)__m1, (__v8qi)__m2); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /Library/Developer/CommandLineTools/usr/lib/clang/12.0.5/include/mmintrin.h:525:12: error: invalid conversion between vector type '__m64' (vector of 1 'long long' value) and integer type 'int' of different size return (__m64)__builtin_ia32_psubw((__v4hi)__m1, (__v4hi)__m2); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ fatal error: too many errors emitted, stopping now [-ferror-limit=] 20 errors generated. Source: #include "confdefs.h" #include "conffix.h" #include int main() { void *v = 0;_mm_prefetch((const char*)v,_MM_HINT_NTA); ; return 0; } Compile failed inside link ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.pthread -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.BlasLapack -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure/conftest.c Possible ERROR while running compiler: exit code 1 stderr: In file included from /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure/conftest.c:3: In file included from /Library/Developer/CommandLineTools/usr/lib/clang/12.0.5/include/xmmintrin.h:13: /Library/Developer/CommandLineTools/usr/lib/clang/12.0.5/include/mmintrin.h:50:12: error: invalid conversion between vector type '__m64' (vector of 1 'long long' value) and integer type 'int' of different size return (__m64)__builtin_ia32_vec_init_v2si(__i, 0); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /Library/Developer/CommandLineTools/usr/lib/clang/12.0.5/include/mmintrin.h:129:12: error: invalid conversion between vector type '__m64' (vector of 1 'long long' value) and integer type 'int' of different size return (__m64)__builtin_ia32_packsswb((__v4hi)__m1, (__v4hi)__m2); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /Library/Developer/CommandLineTools/usr/lib/clang/12.0.5/include/mmintrin.h:159:12: error: invalid conversion between vector type '__m64' (vector of 1 'long long' value) and integer type 'int' of different size return (__m64)__builtin_ia32_packssdw((__v2si)__m1, (__v2si)__m2); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /Library/Developer/CommandLineTools/usr/lib/clang/12.0.5/include/mmintrin.h:189:12: error: invalid conversion between vector type '__m64' (vector of 1 'long long' value) and integer type 'int' of different size return (__m64)__builtin_ia32_packuswb((__v4hi)__m1, (__v4hi)__m2); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /Library/Developer/CommandLineTools/usr/lib/clang/12.0.5/include/mmintrin.h:216:12: error: invalid conversion between vector type '__m64' (vector of 1 'long long' value) and integer type 'int' of different size return (__m64)__builtin_ia32_punpckhbw((__v8qi)__m1, (__v8qi)__m2); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /Library/Developer/CommandLineTools/usr/lib/clang/12.0.5/include/mmintrin.h:239:12: error: invalid conversion between vector type '__m64' (vector of 1 'long long' value) and integer type 'int' of different size return (__m64)__builtin_ia32_punpckhwd((__v4hi)__m1, (__v4hi)__m2); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /Library/Developer/CommandLineTools/usr/lib/clang/12.0.5/include/mmintrin.h:260:12: error: invalid conversion between vector type '__m64' (vector of 1 'long long' value) and integer type 'int' of different size return (__m64)__builtin_ia32_punpckhdq((__v2si)__m1, (__v2si)__m2); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /Library/Developer/CommandLineTools/usr/lib/clang/12.0.5/include/mmintrin.h:287:12: error: invalid conversion between vector type '__m64' (vector of 1 'long long' value) and integer type 'int' of different size return (__m64)__builtin_ia32_punpcklbw((__v8qi)__m1, (__v8qi)__m2); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /Library/Developer/CommandLineTools/usr/lib/clang/12.0.5/include/mmintrin.h:310:12: error: invalid conversion between vector type '__m64' (vector of 1 'long long' value) and integer type 'int' of different size return (__m64)__builtin_ia32_punpcklwd((__v4hi)__m1, (__v4hi)__m2); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /Library/Developer/CommandLineTools/usr/lib/clang/12.0.5/include/mmintrin.h:331:12: error: invalid conversion between vector type '__m64' (vector of 1 'long long' value) and integer type 'int' of different size return (__m64)__builtin_ia32_punpckldq((__v2si)__m1, (__v2si)__m2); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /Library/Developer/CommandLineTools/usr/lib/clang/12.0.5/include/mmintrin.h:352:12: error: invalid conversion between vector type '__m64' (vector of 1 'long long' value) and integer type 'int' of different size return (__m64)__builtin_ia32_paddb((__v8qi)__m1, (__v8qi)__m2); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /Library/Developer/CommandLineTools/usr/lib/clang/12.0.5/include/mmintrin.h:373:12: error: invalid conversion between vector type '__m64' (vector of 1 'long long' value) and integer type 'int' of different size return (__m64)__builtin_ia32_paddw((__v4hi)__m1, (__v4hi)__m2); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /Library/Developer/CommandLineTools/usr/lib/clang/12.0.5/include/mmintrin.h:394:12: error: invalid conversion between vector type '__m64' (vector of 1 'long long' value) and integer type 'int' of different size return (__m64)__builtin_ia32_paddd((__v2si)__m1, (__v2si)__m2); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /Library/Developer/CommandLineTools/usr/lib/clang/12.0.5/include/mmintrin.h:416:12: error: invalid conversion between vector type '__m64' (vector of 1 'long long' value) and integer type 'int' of different size return (__m64)__builtin_ia32_paddsb((__v8qi)__m1, (__v8qi)__m2); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /Library/Developer/CommandLineTools/usr/lib/clang/12.0.5/include/mmintrin.h:439:12: error: invalid conversion between vector type '__m64' (vector of 1 'long long' value) and integer type 'int' of different size return (__m64)__builtin_ia32_paddsw((__v4hi)__m1, (__v4hi)__m2); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /Library/Developer/CommandLineTools/usr/lib/clang/12.0.5/include/mmintrin.h:461:12: error: invalid conversion between vector type '__m64' (vector of 1 'long long' value) and integer type 'int' of different size return (__m64)__builtin_ia32_paddusb((__v8qi)__m1, (__v8qi)__m2); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /Library/Developer/CommandLineTools/usr/lib/clang/12.0.5/include/mmintrin.h:483:12: error: invalid conversion between vector type '__m64' (vector of 1 'long long' value) and integer type 'int' of different size return (__m64)__builtin_ia32_paddusw((__v4hi)__m1, (__v4hi)__m2); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /Library/Developer/CommandLineTools/usr/lib/clang/12.0.5/include/mmintrin.h:504:12: error: invalid conversion between vector type '__m64' (vector of 1 'long long' value) and integer type 'int' of different size return (__m64)__builtin_ia32_psubb((__v8qi)__m1, (__v8qi)__m2); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /Library/Developer/CommandLineTools/usr/lib/clang/12.0.5/include/mmintrin.h:525:12: error: invalid conversion between vector type '__m64' (vector of 1 'long long' value) and integer type 'int' of different size return (__m64)__builtin_ia32_psubw((__v4hi)__m1, (__v4hi)__m2); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ fatal error: too many errors emitted, stopping now [-ferror-limit=] 20 errors generated. Source: #include "confdefs.h" #include "conffix.h" #include int main() { void *v = 0;_mm_prefetch(v,_MM_HINT_NTA); ; return 0; } Compile failed inside link ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.pthread -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.BlasLapack -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { void *v = 0;__builtin_prefetch(v,0,0); ; return 0; } Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure/conftest.o -ldl Defined "Prefetch(a,b,c)" to "__builtin_prefetch((a),(b),(c))" Defined "PREFETCH_HINT_NTA" to "0" Defined "PREFETCH_HINT_T0" to "3" Defined "PREFETCH_HINT_T1" to "2" Defined "PREFETCH_HINT_T2" to "1" ============================================================================================= TESTING: configureUnused from PETSc.Configure(config/PETSc/Configure.py:595) Sees if __attribute((unused)) is supported ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.pthread -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.BlasLapack -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure/conftest.c Possible ERROR while running compiler: stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure/conftest.c:7:5: warning: unused variable 'j' [-Wunused-variable] int j = myfunc(&i); ^ 1 warning generated. Source: #include "confdefs.h" #include "conffix.h" __attribute((unused)) static int myfunc(__attribute((unused)) void *name){ return 1;} int main() { int i = 0; int j = myfunc(&i); typedef void* atype; __attribute((unused)) atype a; ; return 0; } Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure/conftest.o -ldl Defined "UNUSED" to "__attribute((unused))" ============================================================================================= TESTING: configureDeprecated from PETSc.Configure(config/PETSc/Configure.py:613) Check if __attribute((deprecated)) is supported ===== Checking compiler Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.pthread -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.BlasLapack -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure/conftest.c Possible ERROR while running compiler: stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure/conftest.c:3:38: warning: unused function 'myfunc' [-Wunused-function] __attribute((deprecated)) static int myfunc(void) { return 1;} ^ 1 warning generated. Source: #include "confdefs.h" #include "conffix.h" __attribute((deprecated)) static int myfunc(void) { return 1;} int main() { ; return 0; } Defined "DEPRECATED_FUNCTION(why)" to "__attribute((deprecated))" Defined "DEPRECATED_TYPEDEF(why)" to "__attribute((deprecated))" ===== Checking compiler Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.pthread -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.BlasLapack -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" enum E {oldval __attribute((deprecated)), newval }; int main() { ; return 0; } Defined "DEPRECATED_ENUM(why)" to "__attribute((deprecated))" ===== Checking compiler Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.pthread -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.BlasLapack -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #define TEST _Pragma("GCC warning "Testing _Pragma"") value int main() { ; return 0; } Defined "DEPRECATED_MACRO(why)" to "_Pragma(why)" ============================================================================================= TESTING: configureIsatty from PETSc.Configure(config/PETSc/Configure.py:607) Check if the Unix C function isatty() works correctly Actually just assumes it does not work correctly on batch systems Defined "USE_ISATTY" to "1" ============================================================================================= TESTING: configureExpect from PETSc.Configure(config/PETSc/Configure.py:662) Sees if the __builtin_expect directive is supported ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.pthread -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.BlasLapack -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { if (__builtin_expect(0,1)) return 1;; return 0; } Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure/conftest.o -ldl Defined "HAVE_BUILTIN_EXPECT" to "1" ============================================================================================= TESTING: configureAlign from PETSc.Configure(config/PETSc/Configure.py:646) Check if __attribute(aligned) is supported ===== Checking compiler Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.pthread -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.BlasLapack -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" struct mystruct {int myint;} __attribute((aligned(16))); char assert_aligned[(sizeof(struct mystruct)==16)*2-1]; int main() { ; return 0; } Defined "ATTRIBUTEALIGNED(size)" to "__attribute((aligned(size)))" Defined "HAVE_ATTRIBUTEALIGNED" to "1" ============================================================================================= TESTING: configureFunctionName from PETSc.Configure(config/PETSc/Configure.py:669) Sees if the compiler supports __func__ or a variant. ===== Checking compiler Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.pthread -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.BlasLapack -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { if (__func__[0] != 'm') return 1;; return 0; } ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.pthread -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.BlasLapack -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { if (__func__[0] != 'm') return 1;; return 0; } Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure/conftest.o -ldl Defined "FUNCTION_NAME_C" to "__func__" ============================================================================================= TESTING: configureIntptrt from PETSc.Configure(config/PETSc/Configure.py:687) Determine what to use for uintptr_t ===== Checking compiler Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.pthread -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.BlasLapack -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure/conftest.c Possible ERROR while running compiler: stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure/conftest.c:6:18: warning: unused variable 'i' [-Wunused-variable] int x; uintptr_t i = (uintptr_t)&x;; ^ 1 warning generated. Source: #include "confdefs.h" #include "conffix.h" #include int main() { int x; uintptr_t i = (uintptr_t)&x;; return 0; } Defined "UINTPTR_T" to "uintptr_t" ============================================================================================= TESTING: configureSolaris from PETSc.Configure(config/PETSc/Configure.py:714) Solaris specific stuff ============================================================================================= TESTING: configureLinux from PETSc.Configure(config/PETSc/Configure.py:736) Linux specific stuff Defined "HAVE_DOUBLE_ALIGN_MALLOC" to "1" ============================================================================================= TESTING: configureDarwin from PETSc.Configure(config/PETSc/Configure.py:727) Log brew configuration for Apple systems Executing: ['brew', 'config'] stdout: HOMEBREW_VERSION: 3.4.5 ORIGIN: https://github.com/Homebrew/brew HEAD: 33709297cf9cb37605cf4efcb7151905baf8ccf5 Last commit: 7 days ago Core tap ORIGIN: https://github.com/Homebrew/homebrew-core Core tap HEAD: 25024497deccb43d3df244912dee631ad55fb7c3 Core tap last commit: 5 hours ago Core tap branch: master HOMEBREW_PREFIX: /opt/homebrew HOMEBREW_CASK_OPTS: [] HOMEBREW_CORE_GIT_REMOTE: https://github.com/Homebrew/homebrew-core HOMEBREW_MAKE_JOBS: 8 Homebrew Ruby: 2.6.8 => /opt/homebrew/Library/Homebrew/vendor/portable-ruby/2.6.8/bin/ruby CPU: octa-core 64-bit arm_firestorm_icestorm Clang: 12.0.5 build 1205 Git: 2.30.1 => /Library/Developer/CommandLineTools/usr/bin/git Curl: 7.64.1 => /usr/bin/curl macOS: 11.5.1-arm64 CLT: 12.5.1.0.1.1623191612 Xcode: N/A Rosetta 2: false Executing: ['brew', 'info', 'gcc'] stdout: gcc: stable 11.2.0 (bottled), HEAD GNU compiler collection https://gcc.gnu.org/ /opt/homebrew/Cellar/gcc/11.2.0_3 (1,412 files, 339.1MB) * Poured from bottle on 2022-03-19 at 11:58:19 From: https://github.com/Homebrew/homebrew-core/blob/HEAD/Formula/gcc.rb License: GPL-3.0-or-later with GCC-exception-3.1 ==> Dependencies Required: gmp, isl, libmpc, mpfr, zstd ==> Options --HEAD Install HEAD version ==> Analytics install: 84,348 (30 days), 285,422 (90 days), 1,332,041 (365 days) install-on-request: 39,275 (30 days), 126,215 (90 days), 600,771 (365 days) build-error: 268 (30 days) ============================================================================================= TESTING: configureWin32 from PETSc.Configure(config/PETSc/Configure.py:742) Win32 non-cygwin specific stuff Checking for functions [GetComputerName] in library ['Kernel32.lib'] [] ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.pthread -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.BlasLapack -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.c Possible ERROR while running compiler: exit code 1 stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.c:4:10: fatal error: 'windows.h' file not found #include ^~~~~~~~~~~ 1 error generated. Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_GetComputerName() { GetComputerName(NULL,NULL);; } int main() { _check_GetComputerName();; return 0; } Compile failed inside link Checking for functions [GetComputerName] in library ['kernel32'] [] ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.pthread -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.BlasLapack -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.c Possible ERROR while running compiler: exit code 1 stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.c:4:10: fatal error: 'windows.h' file not found #include ^~~~~~~~~~~ 1 error generated. Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_GetComputerName() { GetComputerName(NULL,NULL);; } int main() { _check_GetComputerName();; return 0; } Compile failed inside link Checking for functions [GetUserName] in library ['Advapi32.lib'] [] ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.pthread -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.BlasLapack -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.c Possible ERROR while running compiler: exit code 1 stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.c:4:10: fatal error: 'windows.h' file not found #include ^~~~~~~~~~~ 1 error generated. Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_GetUserName() { GetUserName(NULL,NULL);; } int main() { _check_GetUserName();; return 0; } Compile failed inside link Checking for functions [GetUserName] in library ['advapi32'] [] ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.pthread -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.BlasLapack -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.c Possible ERROR while running compiler: exit code 1 stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.c:4:10: fatal error: 'windows.h' file not found #include ^~~~~~~~~~~ 1 error generated. Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_GetUserName() { GetUserName(NULL,NULL);; } int main() { _check_GetUserName();; return 0; } Compile failed inside link Checking for functions [GetDC] in library ['User32.lib'] [] ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.pthread -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.BlasLapack -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.c Possible ERROR while running compiler: exit code 1 stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.c:4:10: fatal error: 'windows.h' file not found #include ^~~~~~~~~~~ 1 error generated. Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_GetDC() { GetDC(0);; } int main() { _check_GetDC();; return 0; } Compile failed inside link Checking for functions [GetDC] in library ['user32'] [] ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.pthread -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.BlasLapack -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.c Possible ERROR while running compiler: exit code 1 stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.c:4:10: fatal error: 'windows.h' file not found #include ^~~~~~~~~~~ 1 error generated. Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_GetDC() { GetDC(0);; } int main() { _check_GetDC();; return 0; } Compile failed inside link Checking for functions [CreateCompatibleDC] in library ['Gdi32.lib'] [] ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.pthread -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.BlasLapack -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.c Possible ERROR while running compiler: exit code 1 stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.c:4:10: fatal error: 'windows.h' file not found #include ^~~~~~~~~~~ 1 error generated. Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_CreateCompatibleDC() { CreateCompatibleDC(0);; } int main() { _check_CreateCompatibleDC();; return 0; } Compile failed inside link Checking for functions [CreateCompatibleDC] in library ['gdi32'] [] ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.pthread -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.BlasLapack -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.c Possible ERROR while running compiler: exit code 1 stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries/conftest.c:4:10: fatal error: 'windows.h' file not found #include ^~~~~~~~~~~ 1 error generated. Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_CreateCompatibleDC() { CreateCompatibleDC(0);; } int main() { _check_CreateCompatibleDC();; return 0; } Compile failed inside link Checking for type: int32_t ===== Checking compiler Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.pthread -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.BlasLapack -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types/conftest.c Possible ERROR while running compiler: stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types/conftest.c:11:9: warning: unused variable 'a' [-Wunused-variable] int32_t a;; ^ 1 warning generated. Source: #include "confdefs.h" #include "conffix.h" #include #include #include int main() { int32_t a;; return 0; } int32_t found ===== Checking compiler Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.pthread -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.BlasLapack -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure/conftest.c Possible ERROR while running compiler: stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure/conftest.c:6:7: warning: unused variable 'u' [-Wunused-variable] uid_t u; ^ 1 warning generated. Source: #include "confdefs.h" #include "conffix.h" #include int main() { uid_t u; ; return 0; } ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.pthread -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.BlasLapack -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure/conftest.c Possible ERROR while running compiler: stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure/conftest.c:8:5: warning: unused variable 'a' [-Wunused-variable] int a=R_OK; ^ 1 warning generated. Source: #include "confdefs.h" #include "conffix.h" #if defined(PETSC_HAVE_UNISTD_H) #include #endif int main() { int a=R_OK; ; return 0; } Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure/conftest.o -ldl ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.pthread -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.BlasLapack -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int a=0; if (S_ISDIR(a)){} ; return 0; } Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure/conftest.o -ldl ===== Checking compiler Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.pthread -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.BlasLapack -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure/conftest.c Possible ERROR while running compiler: exit code 1 stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure/conftest.c:3:10: fatal error: 'windows.h' file not found #include ^~~~~~~~~~~ 1 error generated. Source: #include "confdefs.h" #include "conffix.h" #include int main() { LARGE_INTEGER a; DWORD b=a.u.HighPart; ; return 0; } ===== Checking compiler Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.pthread -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.BlasLapack -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure/conftest.c Possible ERROR while running compiler: exit code 1 stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure/conftest.c:3:10: fatal error: 'windows.h' file not found #include ^~~~~~~~~~~ 1 error generated. Source: #include "confdefs.h" #include "conffix.h" #include #include int main() { int flags = O_BINARY;; return 0; } Defined "REPLACE_DIR_SEPARATOR" to "'\\'" Defined "DIR_SEPARATOR" to "'/'" Defined "DIR" to ""/Users/veronikaulanova/Documents/documents/Oxford_work/petsc"" Defined make macro "wPETSC_DIR" to "/Users/veronikaulanova/Documents/documents/Oxford_work/petsc" Defined "ARCH" to ""arch-darwin-c-debug"" ============================================================================================= TESTING: configureCygwinBrokenPipe from PETSc.Configure(config/PETSc/Configure.py:820) Cygwin version <= 1.7.18 had issues with pipes and long commands invoked from gnu-make http://cygwin.com/ml/cygwin/2013-05/msg00340.html Executing: uname -s stdout: Darwin ============================================================================================= TESTING: configureDefaultArch from PETSc.Configure(config/PETSc/Configure.py:836) ============================================================================================= TESTING: configureScript from PETSc.Configure(config/PETSc/Configure.py:853) Output a script in the conf directory which will reproduce the configuration ============================================================================================= TESTING: configureInstall from PETSc.Configure(config/PETSc/Configure.py:892) Setup the directories for installation Defined make rule "print_mesg_after_build" with dependencies "" and code ['-@echo "========================================="', '-@echo "Now to check if the libraries are working do:"', '-@echo "${MAKE_USER} PETSC_DIR=${PETSC_DIR} PETSC_ARCH=${PETSC_ARCH} check"', '-@echo "========================================="'] ============================================================================================= TESTING: configureGCOV from PETSc.Configure(config/PETSc/Configure.py:908) ============================================================================================= TESTING: configureAtoll from PETSc.Configure(config/PETSc/Configure.py:590) Checks if atoll exists ===== Checking linker Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.pthread -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.BlasLapack -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure/conftest.c Possible ERROR while running compiler: stderr: /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure/conftest.c:7:6: warning: unused variable 'v' [-Wunused-variable] long v = atoll("25"); ^ 1 warning generated. Source: #include "confdefs.h" #include "conffix.h" #define _POSIX_C_SOURCE 200112L #include int main() { long v = atoll("25"); return 0; } Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure/conftest -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure/conftest.o -ldl Defined "HAVE_ATOLL" to "1" ============================================================================================= Executing: CC -VV Defined "USE_SOCKET_VIEWER" to "1" ===== Checking compiler Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -c -o /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure/conftest.o -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.closure -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilersFortran -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.headers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.cacheDetails -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.functions -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.getResidentSetSize -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.featureTestMacros -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.utilities.missing -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.sharedLibraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilerFlags -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.options.scalarTypes -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.MPI -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.setCompilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.compilers -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.pthread -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.packages.BlasLapack -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.libraries -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/config.types -I/var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 /var/folders/xl/zh4d8mrn73z5vp6sqqbx06w40000gn/T/petsc-dm6w5srn/PETSc.Configure/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { setsockopt(0,SOL_SOCKET,SO_REUSEADDR,0,0); return 0; } Defined "HAVE_SO_REUSEADDR" to "1" ============================================================================================= Executing: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -show stdout: gcc -fPIC -fstack-protector -fno-stack-check -Qunused-arguments -g3 -O0 -fno-common -Wno-implicit-function-declaration -Wl,-flat_namespace -Wl,-commons,use_dylibs -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include -L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -lmpi -lpmpi Defined "MPICC_SHOW" to ""gcc -fPIC -fstack-protector -fno-stack-check -Qunused-arguments -g3 -O0 -fno-common -Wno-implicit-function-declaration -Wl,-flat_namespace -Wl,-commons,use_dylibs -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include -L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -lmpi -lpmpi"" Defined make macro "CC_FLAGS" to " -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 " Defined make macro "CPP_FLAGS" to " " Defined make macro "PCC" to "/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc" Defined make macro "PCC_FLAGS" to " -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 " Defined make macro "CC_SUFFIX" to "o" Defined make macro "PCC_LINKER" to "/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc" Defined make macro "PCC_LINKER_FLAGS" to " -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0" Defined make macro "CC_LINKER_SUFFIX" to "" Defined "HAVE_FORTRAN" to "1" Defined make macro "FPP_FLAGS" to "" Defined make macro "FC_FLAGS" to " -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 " Defined make macro "FC_SUFFIX" to "o" Defined make macro "FC_LINKER" to "/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90" Defined make macro "FC_LINKER_FLAGS" to " -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0" Defined make macro "DARWIN_COMMONS_USE_DYLIBS" to " -Wl,-commons,use_dylibs " Defined make macro "FC_MODULE_FLAG" to "-I" Defined make macro "FC_MODULE_OUTPUT_FLAG" to "-J" Defined make macro "SL_LINKER" to "/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc" Defined make macro "SL_LINKER_FLAGS" to "${PCC_LINKER_FLAGS}" Defined make macro "SL_LINKER_SUFFIX" to "dylib" Defined "SLSUFFIX" to ""dylib"" Defined make macro "SL_LINKER_LIBS" to "${PETSC_EXTERNAL_LIB_BASIC}" Defined make macro "PETSC_LANGUAGE" to "CONLY" Defined make macro "PETSC_SCALAR" to "real" Defined make macro "PETSC_PRECISION" to "double" ============================================================================================= Defined make macro "BLASLAPACK_LIB" to "-Wl,-rpath,/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -lflapack -lfblas" Defined make macro "BLASLAPACK_INCLUDE" to "" Defined "HAVE_PTHREAD" to "1" Defined make macro "PTHREAD_LIB" to "" Defined make macro "PTHREAD_INCLUDE" to "" Defined "HAVE_FBLASLAPACK" to "1" Defined make macro "FBLASLAPACK_LIB" to "" Defined make macro "FBLASLAPACK_INCLUDE" to "" Defined "HAVE_MATHLIB" to "1" Defined make macro "MATHLIB_LIB" to "" Defined make macro "MATHLIB_INCLUDE" to "" Defined "HAVE_REGEX" to "1" Defined make macro "REGEX_LIB" to "" Defined make macro "REGEX_INCLUDE" to "" Defined "HAVE_SOWING" to "1" Defined make macro "SOWING_LIB" to "" Defined make macro "SOWING_INCLUDE" to "" Defined make macro "MPI_LIB" to "" Defined make macro "MPI_INCLUDE" to "-I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include" Defined "HAVE_MPICH" to "1" Defined make macro "MPICH_LIB" to "" Defined make macro "MPICH_INCLUDE" to "" Defined make macro "PETSC_EXTERNAL_LIB_BASIC" to "-Wl,-rpath,/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 -lflapack -lfblas -ldl -lmpifort -lmpi -lpmpi -lgfortran -lgcc_s.1.1 -lm -ldl" Defined make macro "PETSC_CC_INCLUDES" to "-I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/include -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include" Defined make macro "PETSC_CC_INCLUDES_INSTALL" to "-I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/include -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include" Defined make macro "PETSC_FC_INCLUDES" to "-I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/include -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include" Defined make macro "PETSC_FC_INCLUDES_INSTALL" to "-I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/include -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include" Defined "LIB_DIR" to ""/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib"" Defined make macro "LIBNAME" to "${INSTALL_LIB_DIR}/libpetsc.${AR_LIB_SUFFIX}" Defined make macro "SHLIBS" to "libpetsc" Defined make macro "PETSC_LIB_BASIC" to "-lpetsc" Defined make macro "PETSC_KSP_LIB_BASIC" to "-lpetsc" Defined make macro "PETSC_TS_LIB_BASIC" to "-lpetsc" Defined make macro "PETSC_TAO_LIB_BASIC" to "-lpetsc" Defined make macro "PETSC_WITH_EXTERNAL_LIB" to "-L${PETSC_DIR}/${PETSC_ARCH}/lib -Wl,-rpath,/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 -lpetsc -lflapack -lfblas -ldl -lmpifort -lmpi -lpmpi -lgfortran -lgcc_s.1.1 -lm -ldl" Defined "USE_SINGLE_LIBRARY" to "1" Defined make macro "PETSC_SYS_LIB" to "${C_SH_LIB_PATH} ${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_VEC_LIB" to "${C_SH_LIB_PATH} ${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_MAT_LIB" to "${C_SH_LIB_PATH} ${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_DM_LIB" to "${C_SH_LIB_PATH} ${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_KSP_LIB" to "${C_SH_LIB_PATH} ${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_SNES_LIB" to "${C_SH_LIB_PATH} ${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_TS_LIB" to "${C_SH_LIB_PATH} ${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_TAO_LIB" to "${C_SH_LIB_PATH} ${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_CHARACTERISTIC_LIB" to "${C_SH_LIB_PATH} ${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_LIB" to "${C_SH_LIB_PATH} ${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_CONTRIB" to "${C_SH_LIB_PATH} ${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "CONFIGURE_OPTIONS" to "--with-cc=gcc --with-cxx=0 --with-petsc4py=1 --with-fc=gfortran --download-mpich --download-fblaslapack --with-debugging=1 --with-shared-libraries=1" ================================================================================ child PETSc.Configure took 4.727612 seconds child sum 42.619548 child total 42.630351 **** arch-darwin-c-debug/lib/petsc/conf/petscvariables **** FAST_AR_FLAGS = Scq AR_FLAGS = cr C_VERSION = Apple clang version 12.0.5 (clang-1205.0.22.11) MPICC_SHOW = gcc -fPIC -fstack-protector -fno-stack-check -Qunused-arguments -g3 -O0 -fno-common -Wno-implicit-function-declaration -Wl,-flat_namespace -Wl,-commons,use_dylibs -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include -L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -lmpi -lpmpi FC_VERSION = GNU Fortran (Homebrew GCC 11.2.0_3) 11.2.0 MPIFC_SHOW = gfortran -fPIC -ffree-line-length-0 -g -O0 -fallow-argument-mismatch -Wl,-flat_namespace -Wl,-commons,use_dylibs -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include -L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -lmpifort -lmpi -lpmpi C_DEPFLAGS = -MMD -MP FC_DEFINE_FLAG = -D FC_DEPFLAGS = -MMD -MP wPETSC_DIR = /Users/veronikaulanova/Documents/documents/Oxford_work/petsc CC_FLAGS = -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 CPP_FLAGS = PCC = /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc PCC_FLAGS = -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 CC_SUFFIX = o PCC_LINKER = /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc PCC_LINKER_FLAGS = -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 CC_LINKER_SUFFIX = FPP_FLAGS = FC_FLAGS = -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 FC_SUFFIX = o FC_LINKER = /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 FC_LINKER_FLAGS = -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wl,-bind_at_load -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 DARWIN_COMMONS_USE_DYLIBS = -Wl,-commons,use_dylibs FC_MODULE_FLAG = -I FC_MODULE_OUTPUT_FLAG = -J SL_LINKER = /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc SL_LINKER_FLAGS = ${PCC_LINKER_FLAGS} SL_LINKER_SUFFIX = dylib SL_LINKER_LIBS = ${PETSC_EXTERNAL_LIB_BASIC} PETSC_LANGUAGE = CONLY PETSC_SCALAR = real PETSC_PRECISION = double BLASLAPACK_LIB = -Wl,-rpath,/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -lflapack -lfblas BLASLAPACK_INCLUDE = PTHREAD_LIB = PTHREAD_INCLUDE = FBLASLAPACK_LIB = FBLASLAPACK_INCLUDE = MATHLIB_LIB = MATHLIB_INCLUDE = REGEX_LIB = REGEX_INCLUDE = SOWING_LIB = SOWING_INCLUDE = MPI_LIB = MPI_INCLUDE = -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include MPICH_LIB = MPICH_INCLUDE = PETSC_EXTERNAL_LIB_BASIC = -Wl,-rpath,/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 -lflapack -lfblas -ldl -lmpifort -lmpi -lpmpi -lgfortran -lgcc_s.1.1 -lm -ldl PETSC_CC_INCLUDES = -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/include -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include PETSC_CC_INCLUDES_INSTALL = -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/include -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include PETSC_FC_INCLUDES = -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/include -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include PETSC_FC_INCLUDES_INSTALL = -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/include -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include LIBNAME = ${INSTALL_LIB_DIR}/libpetsc.${AR_LIB_SUFFIX} SHLIBS = libpetsc PETSC_LIB_BASIC = -lpetsc PETSC_KSP_LIB_BASIC = -lpetsc PETSC_TS_LIB_BASIC = -lpetsc PETSC_TAO_LIB_BASIC = -lpetsc PETSC_WITH_EXTERNAL_LIB = -L${PETSC_DIR}/${PETSC_ARCH}/lib -Wl,-rpath,/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc/aarch64-apple-darwin20/11 -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11/gcc -Wl,-rpath,/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 -L/opt/homebrew/Cellar/gcc/11.2.0_3/lib/gcc/11 -lpetsc -lflapack -lfblas -ldl -lmpifort -lmpi -lpmpi -lgfortran -lgcc_s.1.1 -lm -ldl PETSC_SYS_LIB = ${C_SH_LIB_PATH} ${PETSC_WITH_EXTERNAL_LIB} PETSC_VEC_LIB = ${C_SH_LIB_PATH} ${PETSC_WITH_EXTERNAL_LIB} PETSC_MAT_LIB = ${C_SH_LIB_PATH} ${PETSC_WITH_EXTERNAL_LIB} PETSC_DM_LIB = ${C_SH_LIB_PATH} ${PETSC_WITH_EXTERNAL_LIB} PETSC_KSP_LIB = ${C_SH_LIB_PATH} ${PETSC_WITH_EXTERNAL_LIB} PETSC_SNES_LIB = ${C_SH_LIB_PATH} ${PETSC_WITH_EXTERNAL_LIB} PETSC_TS_LIB = ${C_SH_LIB_PATH} ${PETSC_WITH_EXTERNAL_LIB} PETSC_TAO_LIB = ${C_SH_LIB_PATH} ${PETSC_WITH_EXTERNAL_LIB} PETSC_CHARACTERISTIC_LIB = ${C_SH_LIB_PATH} ${PETSC_WITH_EXTERNAL_LIB} PETSC_LIB = ${C_SH_LIB_PATH} ${PETSC_WITH_EXTERNAL_LIB} PETSC_CONTRIB = ${C_SH_LIB_PATH} ${PETSC_WITH_EXTERNAL_LIB} CONFIGURE_OPTIONS = --with-cc=gcc --with-cxx=0 --with-petsc4py=1 --with-fc=gfortran --download-mpich --download-fblaslapack --with-debugging=1 --with-shared-libraries=1 MKDIR = /bin/mkdir -p SHELL = /bin/bash SED = /usr/bin/sed SEDINPLACE = /usr/bin/sed -i "" MV = /bin/mv CP = /bin/cp GREP = /usr/bin/grep RM = /bin/rm -f DIFF = /usr/bin/diff -w PYTHON = /opt/homebrew/opt/python@3.9/bin/python3.9 M4 = /usr/bin/m4 CPP = /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -E FPP = /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 -E AR = /usr/bin/ar RANLIB = /usr/bin/ranlib -c AR_LIB_SUFFIX = a LD_SHARED = /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc DYNAMICLINKER = /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc CC_LINKER_SLFLAG = -Wl,-rpath, FC_LINKER_SLFLAG = -Wl,-rpath, CC = /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc FC = /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 CLANGUAGE = C GIT = git PREFIXDIR = /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug PETSC_SCALAR_SIZE = 64 PETSC_INDEX_SIZE = 32 MAKE = /usr/bin/make MAKE_USER = make OMAKE_PRINTDIR = /usr/bin/make --print-directory OMAKE = /usr/bin/make --no-print-directory MAKE_PAR_OUT_FLG = MAKE_NP = 7 MAKE_TEST_NP = 4 MAKE_LOAD = 12.0 NPMAX = 8 SONAME_FUNCTION = $(1).$(2).dylib SL_LINKER_FUNCTION = -dynamiclib -install_name $(call SONAME_FUNCTION,$(1),$(2)) -compatibility_version $(2) -current_version $(3) -single_module -multiply_defined suppress -undefined dynamic_lookup BUILDSHAREDLIB = yes LLDB = /usr/bin/lldb DSYMUTIL = /usr/bin/dsymutil MPIEXEC = /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpiexec SOCKETFILTERFW = /usr/libexec/ApplicationFirewall/socketfilterfw HOSTNAME = hostname PING = /sbin/ping PETSC4PY = yes PETSC4PY_NP = 4 PDFLATEX = /Library/TeX/texbin/pdflatex BFORT = /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/bfort DOCTEXT = /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/doctext MAPNAMES = /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mapnames BIB2HTML = /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/bib2html PETSC_TEST_OPTIONS = -use_gpu_aware_mpi 0 **** arch-darwin-c-debug/lib/petsc/conf/petscrules **** print_mesg_after_build: -@echo "=========================================" -@echo "Now to check if the libraries are working do:" -@echo "${MAKE_USER} PETSC_DIR=${PETSC_DIR} PETSC_ARCH=${PETSC_ARCH} check" -@echo "=========================================" libc: ${LIBNAME}(${OBJSC}) libcxx: ${LIBNAME}(${OBJSCXX}) libcu: ${LIBNAME}(${OBJSCU}) libf: ${OBJSF} -${AR} ${AR_FLAGS} ${LIBNAME} ${OBJSF} shared_arch: shared_darwin amrex-build: amrex-install: mfem-build: mfem-install: slepc-build: slepc-install: bamg-build: bamg-install: hpddm-build: hpddm-install: libmesh-build: libmesh-install: petsc4pybuild: @echo "*** Building petsc4py ***" @${RM} -f ${PETSC_ARCH}/lib/petsc/conf/petsc4py.errorflg @(cd src/binding/petsc4py && \ MPICC=${PCC} ARCHFLAGS='-arch arm64' /opt/homebrew/opt/python@3.9/bin/python3.9 setup.py build ) || \ (echo "**************************ERROR*************************************" && \ echo "Error building petsc4py." && \ echo "********************************************************************" && \ touch ${PETSC_ARCH}/lib/petsc/conf/petsc4py.errorflg && \ exit 1) petsc4pyinstall: @echo "*** Installing petsc4py ***" @(MPICC=${PCC} && export MPICC && cd src/binding/petsc4py && \ MPICC=${PCC} ARCHFLAGS='-arch arm64' /opt/homebrew/opt/python@3.9/bin/python3.9 setup.py install --install-lib=/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib \ $(if $(DESTDIR),--root='$(DESTDIR)') ) || \ (echo "**************************ERROR*************************************" && \ echo "Error building petsc4py." && \ echo "********************************************************************" && \ exit 1) @echo "=====================================" @echo "To use petsc4py, add /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib to PYTHONPATH" @echo "=====================================" petsc4pytest: @echo "*** Testing petsc4py on ${PETSC4PY_NP} processes ***" @PYTHONPATH=/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib:${PETSC_MPI4PY_PYTHONPATH}:${PYTHONPATH} PETSC_OPTIONS="{PETSC_OPTIONS} -check_pointer_intensity 0 -error_output_stdout -malloc_dump ${PETSC_TEST_OPTIONS}" ${MPIEXEC} -n ${PETSC4PY_NP} /opt/homebrew/opt/python@3.9/bin/python3.9 src/binding/petsc4py/test/runtests.py --verbose @echo "=====================================" petsc4py-build: petsc4pybuild petsc4pyinstall petsc4py-install: **** arch-darwin-c-debug/include/petscconf.h **** #if !defined(INCLUDED_UNKNOWN) #define INCLUDED_UNKNOWN #define PETSC_ARCH "arch-darwin-c-debug" #define PETSC_ATTRIBUTEALIGNED(size) __attribute((aligned(size))) #define PETSC_Alignx(a,b) #define PETSC_BLASLAPACK_UNDERSCORE 1 #define PETSC_CLANGUAGE_C 1 #define PETSC_DEPRECATED_ENUM(why) __attribute((deprecated)) #define PETSC_DEPRECATED_FUNCTION(why) __attribute((deprecated)) #define PETSC_DEPRECATED_MACRO(why) _Pragma(why) #define PETSC_DEPRECATED_TYPEDEF(why) __attribute((deprecated)) #define PETSC_DIR "/Users/veronikaulanova/Documents/documents/Oxford_work/petsc" #define PETSC_DIR_SEPARATOR '/' #define PETSC_DO_NOT_SWAP_CHILD_FOR_DEBUGGER 1 #define PETSC_FORTRAN_CHARLEN_T size_t #define PETSC_FORTRAN_TYPE_INITIALIZE = -2 #define PETSC_FUNCTION_NAME_C __func__ #define PETSC_HAVE_ACCESS 1 #define PETSC_HAVE_ATOLL 1 #define PETSC_HAVE_ATTRIBUTEALIGNED 1 #define PETSC_HAVE_BUILTIN_EXPECT 1 #define PETSC_HAVE_BZERO 1 #define PETSC_HAVE_C99_COMPLEX 1 #define PETSC_HAVE_CLOCK 1 #define PETSC_HAVE_CLOSURE 1 #define PETSC_HAVE_CXXABI_H 1 #define PETSC_HAVE_DLADDR 1 #define PETSC_HAVE_DLCLOSE 1 #define PETSC_HAVE_DLERROR 1 #define PETSC_HAVE_DLFCN_H 1 #define PETSC_HAVE_DLOPEN 1 #define PETSC_HAVE_DLSYM 1 #define PETSC_HAVE_DOUBLE_ALIGN_MALLOC 1 #define PETSC_HAVE_DRAND48 1 #define PETSC_HAVE_DYNAMIC_LIBRARIES 1 #define PETSC_HAVE_ERF 1 #define PETSC_HAVE_FBLASLAPACK 1 #define PETSC_HAVE_FCNTL_H 1 #define PETSC_HAVE_FENV_H 1 #define PETSC_HAVE_FLOAT_H 1 #define PETSC_HAVE_FORK 1 #define PETSC_HAVE_FORTRAN 1 #define PETSC_HAVE_FORTRAN_FLUSH 1 #define PETSC_HAVE_FORTRAN_GET_COMMAND_ARGUMENT 1 #define PETSC_HAVE_FORTRAN_TYPE_STAR 1 #define PETSC_HAVE_FORTRAN_UNDERSCORE 1 #define PETSC_HAVE_GETCWD 1 #define PETSC_HAVE_GETDOMAINNAME 1 #define PETSC_HAVE_GETHOSTBYNAME 1 #define PETSC_HAVE_GETHOSTNAME 1 #define PETSC_HAVE_GETPAGESIZE 1 #define PETSC_HAVE_GETRUSAGE 1 #define PETSC_HAVE_GETWD 1 #define PETSC_HAVE_IMMINTRIN_H 1 #define PETSC_HAVE_INTTYPES_H 1 #define PETSC_HAVE_ISINF 1 #define PETSC_HAVE_ISNAN 1 #define PETSC_HAVE_ISNORMAL 1 #define PETSC_HAVE_LGAMMA 1 #define PETSC_HAVE_LOG2 1 #define PETSC_HAVE_LSEEK 1 #define PETSC_HAVE_MACHINE_ENDIAN_H 1 #define PETSC_HAVE_MEMMOVE 1 #define PETSC_HAVE_MMAP 1 #define PETSC_HAVE_MPICH 1 #define PETSC_HAVE_MPICH_NUMVERSION 30402300 #define PETSC_HAVE_MPIEXEC_ENVIRONMENTAL_VARIABLE MPIR_CVAR_CH3 #define PETSC_HAVE_MPIIO 1 #define PETSC_HAVE_MPI_COMBINER_CONTIGUOUS 1 #define PETSC_HAVE_MPI_COMBINER_DUP 1 #define PETSC_HAVE_MPI_COMBINER_NAMED 1 #define PETSC_HAVE_MPI_F90MODULE 1 #define PETSC_HAVE_MPI_F90MODULE_VISIBILITY 1 #define PETSC_HAVE_MPI_FEATURE_DYNAMIC_WINDOW 1 #define PETSC_HAVE_MPI_GET_ACCUMULATE 1 #define PETSC_HAVE_MPI_GET_LIBRARY_VERSION 1 #define PETSC_HAVE_MPI_INIT_THREAD 1 #define PETSC_HAVE_MPI_INT64_T 1 #define PETSC_HAVE_MPI_LONG_DOUBLE 1 #define PETSC_HAVE_MPI_NEIGHBORHOOD_COLLECTIVES 1 #define PETSC_HAVE_MPI_NONBLOCKING_COLLECTIVES 1 #define PETSC_HAVE_MPI_ONE_SIDED 1 #define PETSC_HAVE_MPI_PROCESS_SHARED_MEMORY 1 #define PETSC_HAVE_MPI_REDUCE_LOCAL 1 #define PETSC_HAVE_MPI_REDUCE_SCATTER_BLOCK 1 #define PETSC_HAVE_MPI_RGET 1 #define PETSC_HAVE_MPI_WIN_CREATE 1 #define PETSC_HAVE_NANOSLEEP 1 #define PETSC_HAVE_NETDB_H 1 #define PETSC_HAVE_NETINET_IN_H 1 #define PETSC_HAVE_PETSC4PY 1 #define PETSC_HAVE_POPEN 1 #define PETSC_HAVE_PTHREAD 1 #define PETSC_HAVE_PTHREAD_H 1 #define PETSC_HAVE_PWD_H 1 #define PETSC_HAVE_RAND 1 #define PETSC_HAVE_READLINK 1 #define PETSC_HAVE_REALPATH 1 #define PETSC_HAVE_REGEX 1 #define PETSC_HAVE_RTLD_GLOBAL 1 #define PETSC_HAVE_RTLD_LAZY 1 #define PETSC_HAVE_RTLD_LOCAL 1 #define PETSC_HAVE_RTLD_NOW 1 #define PETSC_HAVE_SETJMP_H 1 #define PETSC_HAVE_SLEEP 1 #define PETSC_HAVE_SNPRINTF 1 #define PETSC_HAVE_SOCKET 1 #define PETSC_HAVE_SOWING 1 #define PETSC_HAVE_SO_REUSEADDR 1 #define PETSC_HAVE_STDINT_H 1 #define PETSC_HAVE_STRCASECMP 1 #define PETSC_HAVE_STRINGS_H 1 #define PETSC_HAVE_STRUCT_SIGACTION 1 #define PETSC_HAVE_SYS_PARAM_H 1 #define PETSC_HAVE_SYS_RESOURCE_H 1 #define PETSC_HAVE_SYS_SOCKET_H 1 #define PETSC_HAVE_SYS_SYSCTL_H 1 #define PETSC_HAVE_SYS_TIMES_H 1 #define PETSC_HAVE_SYS_TIME_H 1 #define PETSC_HAVE_SYS_TYPES_H 1 #define PETSC_HAVE_SYS_UTSNAME_H 1 #define PETSC_HAVE_SYS_WAIT_H 1 #define PETSC_HAVE_TGAMMA 1 #define PETSC_HAVE_TIME 1 #define PETSC_HAVE_TIME_H 1 #define PETSC_HAVE_UNAME 1 #define PETSC_HAVE_UNISTD_H 1 #define PETSC_HAVE_USLEEP 1 #define PETSC_HAVE_VA_COPY 1 #define PETSC_HAVE_VSNPRINTF 1 #define PETSC_IS_COLORING_MAX USHRT_MAX #define PETSC_IS_COLORING_VALUE_TYPE short #define PETSC_IS_COLORING_VALUE_TYPE_F integer2 #define PETSC_LEVEL1_DCACHE_LINESIZE 32 #define PETSC_LIB_DIR "/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib" #define PETSC_MAX_PATH_LEN 1024 #define PETSC_MEMALIGN 16 #define PETSC_MPICC_SHOW "gcc -fPIC -fstack-protector -fno-stack-check -Qunused-arguments -g3 -O0 -fno-common -Wno-implicit-function-declaration -Wl,-flat_namespace -Wl,-commons,use_dylibs -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include -L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -lmpi -lpmpi" #define PETSC_MPIU_IS_COLORING_VALUE_TYPE MPI_UNSIGNED_SHORT #define PETSC_PETSC4PY_INSTALL_PATH "/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib" #define PETSC_PETSC_USING_DARWIN 1 #define PETSC_PREFETCH_HINT_NTA 0 #define PETSC_PREFETCH_HINT_T0 3 #define PETSC_PREFETCH_HINT_T1 2 #define PETSC_PREFETCH_HINT_T2 1 #define PETSC_PYTHON_EXE "/opt/homebrew/opt/python@3.9/bin/python3.9" #define PETSC_Prefetch(a,b,c) __builtin_prefetch((a),(b),(c)) #define PETSC_REPLACE_DIR_SEPARATOR '\\' #define PETSC_RTLD_DEFAULT 1 #define PETSC_SIZEOF_ENUM 4 #define PETSC_SIZEOF_INT 4 #define PETSC_SIZEOF_LONG 8 #define PETSC_SIZEOF_LONG_LONG 8 #define PETSC_SIZEOF_SHORT 2 #define PETSC_SIZEOF_SIZE_T 8 #define PETSC_SIZEOF_VOID_P 8 #define PETSC_SLSUFFIX "dylib" #define PETSC_UINTPTR_T uintptr_t #define PETSC_UNUSED __attribute((unused)) #define PETSC_USE_AVX512_KERNELS 1 #define PETSC_USE_BACKWARD_LOOP 1 #define PETSC_USE_CTABLE 1 #define PETSC_USE_DEBUG 1 #define PETSC_USE_DEBUGGER "lldb" #define PETSC_USE_INFO 1 #define PETSC_USE_ISATTY 1 #define PETSC_USE_LOG 1 #define PETSC_USE_REAL_DOUBLE 1 #define PETSC_USE_SHARED_LIBRARIES 1 #define PETSC_USE_SINGLE_LIBRARY 1 #define PETSC_USE_SOCKET_VIEWER 1 #define PETSC_USE_VISIBILITY_C 1 #define PETSC_USING_64BIT_PTR 1 #define PETSC_USING_F2003 1 #define PETSC_USING_F90FREEFORM 1 #define PETSC_VERSION_BRANCH_GIT "release" #define PETSC_VERSION_DATE_GIT "2022-04-08 09:03:34 +0000" #define PETSC_VERSION_GIT "v3.17.0-41-gf475bb4cb5" #define PETSC__BSD_SOURCE 1 #define PETSC__DEFAULT_SOURCE 1 #define PETSC__GNU_SOURCE 1 #endif **** arch-darwin-c-debug/include/petscfix.h **** #if !defined(INCLUDED_UNKNOWN) #define INCLUDED_UNKNOWN #if defined(__cplusplus) extern "C" { } #else #endif #endif **** arch-darwin-c-debug/include/petscpkg_version.h **** #if !defined(INCLUDED_UNKNOWN) #define INCLUDED_UNKNOWN #define PETSC_PKG_MPI_VERSION_MAJOR 3 #define PETSC_PKG_MPI_VERSION_MINOR 0 #define PETSC_PKG_MPI_VERSION_SUBMINOR 0 #define PETSC_PKG_MPI_VERSION_ PETSC_PKG_MPI_VERSION_EQ #define PETSC_PKG_MPI_VERSION_EQ(MAJOR,MINOR,SUBMINOR) \ ((PETSC_PKG_MPI_VERSION_MAJOR == (MAJOR)) && \ (PETSC_PKG_MPI_VERSION_MINOR == (MINOR)) && \ (PETSC_PKG_MPI_VERSION_SUBMINOR == (SUBMINOR))) #define PETSC_PKG_MPI_VERSION_LT(MAJOR,MINOR,SUBMINOR) \ (PETSC_PKG_MPI_VERSION_MAJOR < (MAJOR) || \ (PETSC_PKG_MPI_VERSION_MAJOR == (MAJOR) && \ (PETSC_PKG_MPI_VERSION_MINOR < (MINOR) || \ (PETSC_PKG_MPI_VERSION_MINOR == (MINOR) && \ (PETSC_PKG_MPI_VERSION_SUBMINOR < (SUBMINOR)))))) #define PETSC_PKG_MPI_VERSION_LE(MAJOR,MINOR,SUBMINOR) \ (PETSC_PKG_MPI_VERSION_LT(MAJOR,MINOR,SUBMINOR) || \ PETSC_PKG_MPI_VERSION_EQ(MAJOR,MINOR,SUBMINOR)) #define PETSC_PKG_MPI_VERSION_GT(MAJOR,MINOR,SUBMINOR) \ ( 0 == PETSC_PKG_MPI_VERSION_LE(MAJOR,MINOR,SUBMINOR)) #define PETSC_PKG_MPI_VERSION_GE(MAJOR,MINOR,SUBMINOR) \ ( 0 == PETSC_PKG_MPI_VERSION_LT(MAJOR,MINOR,SUBMINOR)) #endif Attempting to save configure hash file: arch-darwin-c-debug/lib/petsc/conf/configure-hash Saved configure hash file: arch-darwin-c-debug/lib/petsc/conf/configure-hash Configure Actions These are the actions performed by configure on the filesystem ----------------------------------------------------------------- PETSc: File creation : Generated Fortran stubs Build : Set default architecture to arch-darwin-c-debug in lib/petsc/conf/petscvariables File creation : Created arch-darwin-c-debug/lib/petsc/conf/reconfigure-arch-darwin-c-debug.py for automatic reconfiguration Framework: RDict update : Substitutions were stored in RDict with parent None File creation : Created makefile configure header arch-darwin-c-debug/lib/petsc/conf/petscvariables File creation : Created makefile configure header arch-darwin-c-debug/lib/petsc/conf/petscrules File creation : Created configure header arch-darwin-c-debug/include/petscconf.h File creation : Created C specific configure header arch-darwin-c-debug/include/petscfix.h File creation : Created configure pkg header arch-darwin-c-debug/include/petscpkg_version.h Compilers: C Compiler: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 Version: Apple clang version 12.0.5 (clang-1205.0.22.11) Fortran Compiler: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpif90 -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O0 Version: GNU Fortran (Homebrew GCC 11.2.0_3) 11.2.0 Linkers: Shared linker: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -dynamiclib -single_module -undefined dynamic_lookup -multiply_defined suppress -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 Dynamic linker: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpicc -dynamiclib -single_module -undefined dynamic_lookup -multiply_defined suppress -Wall -Wwrite-strings -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g3 -O0 Libraries linked against: -ldl BlasLapack: Library: -Wl,-rpath,/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -L/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/lib -lflapack -lfblas uses 4 byte integers MPI: Version: 3 Includes: -I/Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/include mpiexec: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/mpiexec Implementation: mpich3 MPICH_NUMVERSION: 30402300 MPICH: pthread: fblaslapack: regex: sowing: Version: 1.1.26 /Users/veronikaulanova/Documents/documents/Oxford_work/petsc/arch-darwin-c-debug/bin/bfort Language used to compile PETSc: C PETSc: PETSC_ARCH: arch-darwin-c-debug PETSC_DIR: /Users/veronikaulanova/Documents/documents/Oxford_work/petsc Prefix: Scalar type: real Precision: double Integer size: 4 bytes Single library: yes Shared libraries: yes Memory alignment from malloc(): 16 bytes Using GNU make: /usr/bin/make xxx=========================================================================xxx Configure stage complete. Now build PETSc libraries with: make PETSC_DIR=/Users/veronikaulanova/Documents/documents/Oxford_work/petsc PETSC_ARCH=arch-darwin-c-debug all xxx=========================================================================xxx ================================================================================ Finishing configure run at Fri, 08 Apr 2022 13:14:14 +0100 ================================================================================