Running Executable WITHOUT threads to time it out Executing: uname -s stdout: Darwin ================================================================================ ================================================================================ Starting configure run at Wed, 10 Mar 2021 12:39:14 -0700 Configure Options: --configModules=PETSc.Configure --optionsModule=config.compilerOptions --with-make-np=32 --download-hypre=1 --with-debugging=no --with-shared-libraries=1 --download-fblaslapack=1 --download-metis=1 --download-ptscotch=1 --download-parmetis=1 --download-superlu_dist=1 --download-mumps=1 --download-strumpack=1 --download-scalapack=1 --download-slepc=1 --with-mpi-dir=/Users/kongf/miniconda3/envs/testpetsc/ --with-cxx-dialect=C++11 --with-fortran-bindings=0 --with-sowing=0 --with-64-bit-indices --download-cmake Working directory: /Users/kongf/projects/moose6/petsc Machine platform: uname_result(system='Darwin', node='Fandes-Mac-Pro.local', release='19.2.0', version='Darwin Kernel Version 19.2.0: Sat Nov 9 03:47:04 PST 2019; root:xnu-6153.61.1~20/RELEASE_X86_64', machine='x86_64', processor='i386') Python version: 3.7.3 (default, Dec 13 2019, 19:58:14) [Clang 11.0.0 (clang-1100.0.33.17)] ================================================================================ ================================================================================ TEST configureExternalPackagesDir from config.framework(/Users/kongf/projects/moose6/petsc/config/BuildSystem/config/framework.py:932) TESTING: configureExternalPackagesDir from config.framework(config/BuildSystem/config/framework.py:932) ================================================================================ TEST configureDebuggers from config.utilities.debuggers(/Users/kongf/projects/moose6/petsc/config/BuildSystem/config/utilities/debuggers.py:21) TESTING: configureDebuggers from config.utilities.debuggers(config/BuildSystem/config/utilities/debuggers.py:21) Find a default debugger and determine its arguments Running Executable WITHOUT threads to time it out Executing: uname -s stdout: Darwin Checking for program /Users/kongf/miniconda3/envs/testpetsc/bin/lldb...not found Checking for program /Users/kongf/miniconda3/condabin/lldb...not found Checking for program /usr/local/bin/lldb...not found Checking for program /usr/bin/lldb...found Defined make macro "LLDB" to "/usr/bin/lldb" Defined "USE_DEBUGGER" to ""lldb"" Running Executable WITHOUT threads to time it out Executing: uname -s stdout: Darwin Checking for program /Users/kongf/miniconda3/envs/testpetsc/bin/dsymutil...found Defined make macro "DSYMUTIL" to "/Users/kongf/miniconda3/envs/testpetsc/bin/dsymutil" Defined make macro "DSYMUTIL" to "/Users/kongf/miniconda3/envs/testpetsc/bin/dsymutil" Running Executable WITHOUT threads to time it out Executing: uname -s stdout: Darwin Defined "DO_NOT_SWAP_CHILD_FOR_DEBUGGER" to "1" child config.utilities.debuggers 0.023081 ================================================================================ TEST configureDirectories from PETSc.options.petscdir(/Users/kongf/projects/moose6/petsc/config/PETSc/options/petscdir.py:23) TESTING: configureDirectories from PETSc.options.petscdir(config/PETSc/options/petscdir.py:23) Checks PETSC_DIR and sets if not set Version Information: #define PETSC_VERSION_RELEASE 1 #define PETSC_VERSION_MAJOR 3 #define PETSC_VERSION_MINOR 14 #define PETSC_VERSION_SUBMINOR 4 #define PETSC_VERSION_PATCH 0 #define PETSC_VERSION_DATE "unknown" #define PETSC_VERSION_GIT "unknown" #define PETSC_VERSION_DATE_GIT "unknown" #define PETSC_VERSION_EQ(MAJOR,MINOR,SUBMINOR) \ #define PETSC_VERSION_ PETSC_VERSION_EQ #define PETSC_VERSION_LT(MAJOR,MINOR,SUBMINOR) \ #define PETSC_VERSION_LE(MAJOR,MINOR,SUBMINOR) \ #define PETSC_VERSION_GT(MAJOR,MINOR,SUBMINOR) \ #define PETSC_VERSION_GE(MAJOR,MINOR,SUBMINOR) \ child PETSc.options.petscdir 0.002912 ================================================================================ TEST getDatafilespath from PETSc.options.dataFilesPath(/Users/kongf/projects/moose6/petsc/config/PETSc/options/dataFilesPath.py:29) TESTING: getDatafilespath from PETSc.options.dataFilesPath(config/PETSc/options/dataFilesPath.py:29) Checks what DATAFILESPATH should be child PETSc.options.dataFilesPath 0.000313 ================================================================================ TEST configureGit from config.sourceControl(/Users/kongf/projects/moose6/petsc/config/BuildSystem/config/sourceControl.py:24) TESTING: configureGit from config.sourceControl(config/BuildSystem/config/sourceControl.py:24) Find the Git executable Checking for program /Users/kongf/miniconda3/envs/testpetsc/bin/git...not found Checking for program /Users/kongf/miniconda3/condabin/git...not found Checking for program /usr/local/bin/git...not found Checking for program /usr/bin/git...found Defined make macro "GIT" to "git" Running Executable WITHOUT threads to time it out Executing: git --version stdout: git version 2.21.1 (Apple Git-122.3) ================================================================================ TEST configureMercurial from config.sourceControl(/Users/kongf/projects/moose6/petsc/config/BuildSystem/config/sourceControl.py:35) TESTING: configureMercurial from config.sourceControl(config/BuildSystem/config/sourceControl.py:35) Find the Mercurial executable Checking for program /Users/kongf/miniconda3/envs/testpetsc/bin/hg...not found Checking for program /Users/kongf/miniconda3/condabin/hg...not found Checking for program /usr/local/bin/hg...not found Checking for program /usr/bin/hg...not found Checking for program /bin/hg...not found Checking for program /usr/sbin/hg...not found Checking for program /sbin/hg...not found Checking for program /Library/TeX/texbin/hg...not found Checking for program /opt/X11/bin/hg...not found Checking for program /Users/kongf/projects/moose6/petsc/lib/petsc/bin/win32fe/hg...not found Unable to find programs ['hg'] providing listing of each search directory to help debug Path provided in Python program Path provided by default path ['x86_64-apple-darwin13.4.0-pagestuff', 'llvm-opt-report', 'llvm-lipo', 'modularize', 'llvm-cxxdump', 'mpif90', 'clang-change-namespace', 'verify-uselistorder', 'llvm-cvtres', 'x86_64-apple-darwin13.4.0-check_dylib', 'hydra_pmi_proxy', 'llvm-strings', 'clang-move', 'x86_64-apple-darwin13.4.0-ranlib', 'llvm-install-name-tool', 'clangd-xpc-test-client', 'clang', 'llvm-lto2', 'x86_64-apple-darwin13.4.0-nmedit', 'mpirun', 'llvm-cfi-verify', 'llvm-cov', 'x86_64-apple-darwin13.4.0-install_name_tool', 'llc', 'gfortran', 'llvm-link', 'llvm-symbolizer', 'llvm-objdump', 'x86_64-apple-darwin13.4.0-strings', 'clang-refactor', 'clang-rename', 'x86_64-apple-darwin13.4.0-mtoc', 'clangd', 'llvm-mca', 'set-xcode-analyzer', 'iconv', 'llvm-rc', '-clang++', 'mpiexec.hydra', 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'sanstats', 'x86_64-apple-darwin13.4.0-otool', 'llvm-split', 'llvm-bcanalyzer', 'hydra_persist', 'mpiexec', 'hmaptool', 'llvm-stress', 'llvm-diff', 'x86_64-apple-darwin13.4.0-seg_addr_table', 'scan-view', 'diagtool', 'mpic++', 'mpifort', 'llvm-modextract', 'hydra_nameserver', 'llvm-gsymutil', 'llvm-strip', 'llvm-mt', 'x86_64-apple-darwin13.4.0-indr', 'llvm-ranlib', 'llvm-cxxmap'] ['conda'] ['dvipdf', 'ps2ps', 'gs-noX11', 'gs', 'apm', 'atom', 'ps2pdfwr', 'ps2pdf12', 'gsdj', 'pdf2dsc', 'ps2pdf14', 'gsnd', 'ps2pdf13', 'gs-X11', 'pphs', 'gsdj500', 'ps2ascii', 'ps2pdf', 'pf2afm', 'pfbtopfa', 'gslp', 'printafm', 'ps2ps2', 'gslj', 'ps2epsi', 'gsbj', 'unix-lpr.sh', 'pdf2ps', 'eps2eps', 'lprsetup.sh'] ['uux', 'cpan', 'BuildStrings', 'loads.d', 'write', 'indent', 'bzip2recover', 'hdiutil', 'top', 'javah', 'pstruct5.18', 'tee', 'binhex5.18.pl', 'xip', 'wsimport', 'bzfgrep', 'qlmanage', 'snmptranslate', 'split', 'chsh', 'stty.pl', 'xml2man', 'iprofiler', 'man', 'lpoptions', 'tabs', 'smtpd2.7.py', 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'genstrings', 'at', 'what', 'sdx', 'm4', 'asa', 'iptab', 'format-sql5.18', 'swiftc', 'nfsstat', 'svnversion', 'uupick', 'ipcs', 'pod2readme5.18', 'pluginkit', 'as', 'MvMac', 'net-server5.18', 'fold', 'gnumake', 'perl5.18', 'log', 'tmutil', 'checknr', 'certtool', 'python2.7', 'vmmap', 'shasum5.18', 'h2xs', 'csrutil', 'shar', 'perldoc5.28', 'ldappasswd', 'lkbib', 'ResMerger', 'bitesize.d', 'db_checkpoint', 'funzip', 'power_report.sh', 'iosnoop', 'atsutil', 'osalang', 'dirname', 'pod2man', 'enc2xs', 'treereg5.28', 'moo-outdated', 'xgettext5.28.pl', 'iopending', 'infokey', 'ncal', 'cpan5.28', 'chflags', 'find2perl5.18', 'fg', 'rwbypid.d', 'jmap', 'dscl', 'leaks', 'splain5.18', 'nbdst', 'mnthome', 'jshell', 'dsexport', 'mdimport', 'id', 'procsystime', 'cd', 'quota', 'uuto', 'fuser', 'dsimport', 'csgather', 'json_pp5.28', 'git-shell', 'ldapsearch', 'command', 'snmp-bridge-mib', 'egrep', 'notifyutil', 'cc', 'dsmemberutil', 'podselect', 'pod2html5.28', 'grn', 'psed', 'whereis', 'tccutil', 'a2p', 'find', 'jstat', 'zcat', 'ip2cc5.18', 'unifdefall', 'nroff', 'pridist.d', 'size', 'timesyncanalyse', 'libnetcfg5.28', 'uustat', 'snmpwalk', 'llvm-g++', 'scp', 'instmodsh5.18', 'tnameserv', 'true', 'afinfo', 'hidutil', 'ldapadd', 'pwpolicy', 'profiles', 'yacc', 'kswitch', 'xcodebuild', 'jobs', 'c89', 'sudo', 'bioutil', 'splain5.28', 'tmdiagnose', 'plockstat', 'xgettext5.18.pl', 'serialver', 'afida', 'pgrep', 'yes', 'lessecho', 'sdiff', 'afscexpand', 'treereg5.18', 'cpan5.18', 'db_deadlock', 'ldapcompare', 'unexpand', 'git-upload-pack', 'ssh-copy-id', 'grolj4', 'fixproc', 'debinhex.pl', 'lorder', 'pod2html5.18', 'ranlib', 'javadoc', 'tput', 'fgrep', 'json_pp5.18', 'sigdist.d', 'ppdhtml', 'libnetcfg5.18', 'auval', 'erb', 'dappprof', 'openssl', 'instmodsh5.28', 'drutil', 'jinfo', 'ip2cc5.28', 'splain', 'pmset', 'xmlcatalog', 'zcmp', 'ptargrep5.28', 'lwp-mirror5.28', 'rwsnoop', 'jstatd', 'htmltree5.28', 'lpr', 'layerutil', 'snmptest', 'mib2c-update', 'grog', 'creatbyproc.d', 'pstruct', 'fdesetup', 'flex', 'hostinfo', 'jcontrol', 'MergePef', 'lpstat', 'SetFile', 'pl2pm5.28', 'pod2html', 'rebase', 'tar', 'rdoc', 'uptime', 's2p', 'pidpersec.d', 'xpath5.18', 'schemagen', 'moo-outdated5.28', 'pod2usage5.28', 'dbiprof5.28', 'cvcp', 'package-stash-conflicts5.28', 'false', 'zegrep', 'memory_pressure', 'uncompress', 'lwp-request', 'ncurses5.4-config', 'findrule5.28', 'sampleproc', 'db_recover', 'ptar5.28', 'h2xs5.28', 'nmedit', 'filebyproc.d', 'bison', 'tclsh8.5', 'jdeps', 'productbuild', 'zipinfo', 'diffstat', 'login', 'db_dump', 'smtpd.py', 'cpuctl', 'cpu_profiler.d', 'which', 'bundler', 'iopattern', 'finger', 'mig', 'sntp', 'klist', 'open', 'GetFileInfo', 'localedef', 'ruby', 'stringdups', 'htmltree', 'ptargrep5.18', 'git', 'tr', 'lwp-mirror5.18', 'htmltree5.18', 'banner', 'leave', 'jconsole', 'paste', 'RezWack', 'moo-outdated5.18', 'bzip2', 'pod2usage5.18', 'uucp', 'passwd', 'dbiprof5.18', 'package-stash-conflicts5.18', 'uuidgen', 'pl2pm5.18', 'install_name_tool', 'cmpdylib', 'makeinfo', 'php-config', 'zfgrep', 'xpath5.28', 'snfsdefrag', 'zipdetails', 'look', 'findrule5.18', 'col', 'dscacheutil', 'ptar5.18', 'zforce', 'lwp-mirror', 'malloc_history', 'cpio', 'nohup', 'kcc', 'ulimit', 'rails', 'bspatch', 'RezDet', 'hotspot.d', 'cvaffinity', 'gatherheaderdoc', 'ppdi', 'pcap-config', 'avmetareadwrite', 'update_dyld_shared_cache_root_mode', 'gen_bridge_metadata', 'gem', 'opendiff', 'h2xs5.18', 'talk', 'expect', 'jimage', 'lockstat', 'dapptrace', 'install-info', 'xattr', 'w', 'gunzip'] ['cat', 'echo', 'launchctl', 'df', 'pwd', 'test', 'csh', 'wait4path', 'unlink', 'sleep', 'stty', 'date', 'ed', 'expr', 'pax', 'bash', 'kill', 'sh', 'ps', 'link', 'tcsh', 'dd', 'mkdir', 'ksh', 'hostname', 'dash', 'rmdir', 'mv', 'ln', 'ls', 'cp', 'sync', 'zsh', 'chmod', 'rm', '['] ['dsconfigad', 'htdbm', 'netbiosd', 'postlock', 'systemsoundserverd', 'dseditgroup', 'avbdeviced', 'rpcinfo', 'BootCacheControl', 'weakpass_edit', 'periodic', 'accton', 'wfsctl', 'postalias', 'slapacl', 'edquota', 'sndiskmove', 'pdisk', 'amt', 'lpadmin', 'fdisk', 'sysadminctl', 'networksetup', 'envvars', 'ktutil', 'setquota', 'otctl', 'sncfgvalidate', 'php-fpm', 'AppleFileServer', 'dnctl', 'mDNSResponder', 'repquota', 'cupsfilter', 'checkgid', 'uuconv', 'sharing', 'vifs', 'ac', 'racoon', 'dsenableroot', 'xsanctl', 'kdcsetup', 'aslmanager', 'screencapture', 'htdigest', 'rtsold', 'chat', 'DevToolsSecurity', 'logresolve', 'cvdbset', 'KernelEventAgent', 'gpt', 'scutil', 'ioreg', 'ab', 'traceroute6', 'pwd_mkdb', 'sysctl', 'appsleepd', 'sshd', 'mDNSResponderHelper', 'authserver', 'sncfginstall', 'postmulti', 'lsof', 'pkgutil', 'slapindex', 'sc_auth', 'ioclasscount', 'uucico', 'firmwarepasswd', 'rarpd', 'tsig-keygen', 'kadmin.local', 'syslogd', 'taskpolicy', 'filecoordinationd', 'dot_clean', 'PasswordService', 'systemsetup', 'zdump', 'snmpd', 'ndp', 'coreaudiod', 'rpcbind', 'praudit', 'usernoted', 'postkick', 'postcat', 'netstat', 'lpc', 'slapadd', 'krbservicesetup', 'sncfgtemplate', 'slapconfig', 'rtadvd', 'httxt2dbm', 'distnoted', 'mtree', 'cupsdisable', 'lpmove', 'disktool', 'purge', 'rpc.statd', 'cupsctl', 'DirectoryService', 'notifyd', 'klist_cdhashes', 'dtrace', 'kextcache', 'cupsd', 'dbmmanage', 'languagesetup', 'skywalkctl', 'mkpassdb', 'postconf', 'createhomedir', 'ocspd', 'iostat', 'cvdb', 'sa', 'rpc.lockd', 'uuxqt', 'mkfile', 'softwareupdate', 'unsetpassword', 'zic', 'nfs4mapid', 'postsuper', 'htpasswd', 'rotatelogs', 'universalaccessd', 'audit', 'httpd', 'bluetoothaudiod', 'slapauth', 'slappasswd', 'localemanager', 'asr', 'cvupdatefs', 'bless', 'cvgather', 'xscertadmin', 'visudo', 'uusched', 'dsconfigldap', 'smbdiagnose', 'cfprefsd', 'auditd', 'uuchk', 'cvfsck', 'kextfind', 'diskutil', 'cvfsid', 'sso_util', 'vsdbutil', 'ddns-confgen', 'ioalloccount', 'uasysdiagnose', 'dev_mkdb', 'hdik', 'slapdn', 'vpnd', 'postqueue', 'setkey', 'tpctl', 'repairHomePermissions', 'spindump', 'cupsreject', 'traceroute', 'quotaoff', 'newsyslog', 'postfix', 'cvfsdb', 'snmptrapd', 'chroot', 'arp', 'cupsaccept', 'nvram', 'chown', 'mkextunpack', 'sncfgremove', 'sncfgquery', 'postlog', 'installer', 'pppd', 'httpd-wrapper', 'system_profiler', 'fcgistarter', 'bluetoothd', 'slapschema', 'kadmin', 'spray', 'cvversions', 'kextlibs', 'tcpdump', 'xartutil', 'securityd', 'nlcontrol', 'quotaon', 'spctl', 'vipw', 'gssd', 'slaptest', 'automount', 'scselect', 'envvars-std', 'graphicssession', 'ckksctl', 'lpinfo', 'smbd', 'serverinfo', 'cvmkfs', 'postmap', 'postdrop', 'cupsenable', 'cron', 'systemstats', 'bnepd', 'kextstat', 'cvlabel', 'sendmail', 'systemkeychain', 'kcditto', 'slapcat', 'ipconfig', 'auditreduce', 'cvadmin', 'WirelessRadioManagerd', 'apachectl', 'htcacheclean'] ['mount_hfs', 'mount_apfs', 'md5', 'fsck', 'mount_udf', 'quotacheck', 'mount_cd9660', 'ping', 'fsck_exfat', 'mount_exfat', 'fsck_udf', 'shutdown', 'route', 'mount_webdav', 'fsck_hfs', 'nfsd', 'reboot', 'nfsiod', 'fsck_cs', 'fsck_apfs', 'fstyp_msdos', 'disklabel', 'mount_msdos', 'fsck_msdos', 'ifconfig', 'halt', 'mount_9p', 'mount_ntfs', 'rtsol', 'newfs_apfs', 'umount', 'fstyp', 'kextunload', 'mpioutil', 'fstyp_ntfs', 'emond', 'mount_nfs', 'newfs_udf', 'mount_ftp', 'pfctl', 'mknod', 'fstyp_udf', 'dmesg', 'mount', 'fibreconfig', 'fstyp_hfs', 'newfs_hfs', 'dynamic_pager', 'launchd', 'newfs_exfat', 'apfs_hfs_convert', 'nologin', 'mount_afp', 'mount_smbfs', 'ping6', 'kextload', 'mount_cddafs', 'mount_fdesc', 'newfs_msdos', 'mount_acfs', 'mount_devfs'] ['luajittex', 'lollipop', 't1disasm', 'chktex', 'rubikrotation', 'lily-rebuild-pdfs', 'weave', 'mag', 'man', 'ebb', 'prepmx', 'mktexlsr', 'gsftopk', 'upmendex', 'dvibook', 'kpsewhere', 'rumakeindex', 'fontinst', 'cef5conv', 'lacheck', 'httexi', 'lily-image-commands', 'texloganalyser', 'dvilj', 'patgen', 'uptex', 'exceltex', 'pdvitype', 'texconfig-sys', 'xmltex', 'vlna', 'texsis', 'dvipdft', 'urlbst', 'pdfcslatex', 'afm2afm', 'cefconv', 'uplatex-dev', 'sjisconv', 'tex2xindy', 'musixtex', 'pdfcsplain', 'opl2ofm', 'de-macro', 'bbl2bib', 'ltx2crossrefxml', 'pdftex', 'r-mpost', 'dvitodvi', 'gftodvi', 'dviconcat', 'texluajitc', 'dvipng', 'pdflatex-dev', 'komkindex', 'tex', 'sty2dtx', 'ppltotf', 'yplan', 'eplain', 'eptex', 'lily-glyph-commands', 'htmex', 'texlua', 'htxelatex', 'xasy', 'fmtutil-user', 'wovp2ovf', 'dvilualatex', 'cefsconv', 'context', 'platex', 'allec', 'adhocfilelist', 'kpsetool', 'makejvf', 'texdoctk', 'xelatex-dev', 'vptovf', 'tex4ht', 'texluajit', 'mtxrunjit', 'uplatex', 'musixflx', 'pfarrei', 'mf', 'latexdiff-vc', 'ttfdump', 'etex', 'fig4latex', 'bibexport', 'ttf2tfm', 'latexmk', 'pmpost', 'ctwill', 'pst2pdf', 'wordcount', 'texconfig-dialog', 'luahbtex', 'lwarpmk', 'dvilj2p', 'dviinfox', 'ttf2kotexfont', 'ctanbib', 'cweave', 'bg5+latex', 'pdfatfi', 'ptex2pdf', 'e2pall', 'kpsewhich', 'upbibtex', 'texdiff', 'mathspic', 'kanji-fontmap-creator', 'kanji-config-updmap', 'asy', 'typeoutfileinfo', 'chklref', 'upmpost', 'pdflatex', 'perltex', 'mkt1font', 'cefslatex', 'cjk-gs-integrate', 'chkdvifont', 'dvitype', 'pdfjadetex', 't1lint', 'jamo-normalize', 'fmtutil-sys', 'wofm2opl', 'dviasm', 'kpsestat', 'pdfxup', 'makedtx', 'pltotf', 'mkindex', 'dvilj6', 'r-pmpost', 'xindy.mem', 'xetex', 'latex', 'ps4pdf', 'multibibliography', 'teckit_compile', 'ttf2afm', 'biburl2doi', 'getmapdl', 'uptftopl', 'contextjit', 'bib2gls', 'texplate', 'match_parens', 'mkjobtexmf', 'updvitomp', 'ps2eps', 'pkfix-helper', 'chkweb', 'arlatex', 'pn2pdf', 'pdfclose', 'xindex', 'clxelatex', 'dosepsbin', 'jadetex', 'a2ping', 'bibzbladd', 'ovf2ovp', 'mfluajit-nowin', 'mpost', 'texosquery-jre5', 'texhash', 'convbkmk', 'thumbpdf', 'pkfix', 'dvihp', 'hbf2gf', 'xindy.run', 'texcount', 'texmfstart', 'latexrevise', 'cefpdflatex', 'texluac', 'dvicopy', 'ctie', 'pdftex-quiet', 'euptex', 'pdftosrc', 'mf-nowin', 'ctangle', 'omfonts', 't1asm', 'mflua-nowin', 'cluttex', 'svn-multi', 'mk4ht', 'afm2tfm', 'pdfopen', 'fragmaster', 'ebong', 'ctanify', 'pygmentex', 'texdef', 'luatex', 'cslatex', 'synctex', 'texdirflatten', 'gbkpdflatex', 'xdvipdfmx', 'sjispdflatex', 'makeindex', 'dviluatex', 'mkofm', 'dvipdfmx', 'psbook', 'dvispc', 'csplain', 'ttftotype42', 'mft', 't1rawafm', 'fmtutil', 'ctwill-twinx', 'simpdftex', 'depythontex', 'otfinfo', 'latexindent', 'kanji-config-updmap-sys', 'extconv', 'disdvi', 'pdvitomp', 'dvipdfm', 'texliveonfly', 'allneeded', 'htcontext', 't1testpage', 'biber', 'dv2dt', 'xindy', 'pdfbook2', 't1unmac', 'xelatex', 'webquiz', 'kpsepath', 'diadia', 'makeglossaries', 'cef5pdflatex', 'autoinst', 'dvilualatex-dev', 'mkpic', 'splitindex', 'repstopdf', 'otangle', 'mfplain', 'latexfileversion', 'latex-git-log', 'inimf', 'lualatex-dev', 'latex2man', 'ps2pk', 'htxetex', 'l3build', 'ptftopl', 'ptex', 'gbklatex', 't1binary', 'bibtex', 't1dotlessj', 'mktexpk', 'detex', 'htlatex', 'odvicopy', 'dvidvi', 'extractres', 'extractbb', 'tie', 'latexdef', 'tlmgr', 'arara', 'ctan-o-mat', 'rubibtex', 'dvigif', 'gftype', 'ketcindy', 'kpseaccess', 'luacsplain', 'cachepic', 'srcredact', 'dtxgen', 'mmafm', 'pktype', 'platex-dev', 'kpsexpand', 'pktogf', 'msxlint', 't1reencode', 'vftovp', 'xhlatex', 'ht', 'mendex', 'make4ht', 'ceflatex', 'texlinks', 'pmxchords', 'mptopdf', 'afm2pl', 'mktexmf', 'lamed', 'gftopk', 'ulqda', 'dvilj4l', 'pooltype', 'bg5latex', 'bibmradd', 'aleph', 'wovf2ovp', 'pdfetex', 'dvi2tty', 'ofm2opl', 'pslatex', 'initex', 'latexpand', 'pamphletangler', 'mkgrkindex', 'mtxrun', 'epsffit', 'listings-ext.sh', 'mktexfmt', 'scor2prt', 'psnup', 'ot2kpx', 'allcm', 'pk2bm', 'dvitomp', 'texindy', 'vpl2vpl', 'luatools', 'cef5latex', 'ctwill-refsort', 'luajithbtex', 'bg5+pdflatex', 'dvisvgm', 'tex2aspc', 'bg5conv', 'deweb', 'tlcockpit', 'cfftot1', 'dviselect', 'odvitype', 'vpl2ovp', 'otp2ocp', 'latexdiff', 'dt2dv', 'bg5pdflatex', 'mf2pt1', 'psresize', 't1mac', 'epspdf', 'pythontex', 'bibtexu', 'authorindex', 'texosquery', 'tlshell', 'pdfxmltex', 'includeres', 't1ascii', 'pdflatexpicscale', 'mfluajit', 'axohelp', 'tangle', 'httex', 'texosquery-jre8', 'checkcites', 'bibtex8', 'dvi2fax', 'otftotfm', 'cefspdflatex', 'mmpfb', 'pfb2pfa', 'vpe', 'psselect', 'latex-dev', 'findhyph', 'gregorio', 'ovp2ovf', 'utf8mex', 'mflua', 'purifyeps', 'autosp', 'bundledoc', 'mllatex', 'tex4ebook', 'xdvi-xaw', 'sjislatex', 'rungs', 'dvilj4', 'ltxfileinfo', 'texconfig', 'updvitype', 'ltximg', 'updmap-user', 'dvips', 'convertgls2bib', 'latex2nemeth', 'pdfjam', 'epstopdf', 'outocp', 'pedigree', 'mkocp', 'kpsereadlink', 'ttf2pk', 'tpic2pdftex', 'kanji-config-updmap-user', 'psjoin', 'm-tx', 'uppltotf', 'texdoc', 'bbox', 'dvired', 'latex-papersize', 'makeglossaries-lite', 't4ht', 'xdvi', 'ps2frag', 'wopl2ofm', 'devnag', 'ctanupload', 'texexec', 'listbib', 'cllualatex', 'lualatex', 'pmxab', 'jfmutil', 'pdfmex', 'tftopl', 'mltex', 'amstex', 'pbibtex', 'pstops', 'optex', 'mex', 'bibdoiadd', 'updmap', 'dvipos', 'luaotfload-tool', 'epspdftk', 'updmap-sys', 'r-upmpost', 'mktextfm', 'texfot', 'checklistings', 'rpdfcrop', 'a5toa4', 'installfont-tl', 'pdfcrop', 'pdfannotextractor'] ['xfs', 'xfsinfo', 'atobm', 'xdpyinfo', 'showrgb', 'xlsfonts', 'editres', 'fonttosfnt', 'xfontsel', 'xclock', 'xmore', 'xman', 'xmag', 'xrefresh', 'fc-list', 'xdmshell', 'xauth', 'twm', 'cxpm', 'mkfontdir', 'xclipboard', 'png-fix-itxt', 'ucs2any', 'xterm', 'bdftruncate', 'xsetroot', 'xmessage', 'xcursorgen', 'fc-pattern', 'xkbvleds', 'xkbbell', 'freetype-config', 'Xephyr', 'fc-validate', 'bitmap', 'libpng16-config', 'pngfix', 'fc-query', 'xkbprint', 'luit', 'xhost', 'gtf', 'listres', 'x11perf', 'Xorg', 'libpng-config', 'koi8rxterm', 'xpr', 'xstdcmap', 'xgc', 'mkfontscale', 'setxkbmap', 'xinit', 'Xquartz', 'xbacklight', 'xdm', 'xcmsdb', 'xdpr', 'xfindproxy', 'xrdb', 'xlsclients', 'xprop', 'xkeystone', 'xeyes', 'Xvfb', 'Xnest', 'xev', 'startx', 'xkbwatch', 'xscope', 'xfd', 'sessreg', 'xwud', 'lndir', 'xinput', 'xconsole', 'glxinfo', 'sxpm', 'xsetmode', 'Xfake', 'fslsfonts', 'xcompmgr', 'xrandr', 'bmtoa', 'xwd', 'xmodmap', 'glxgears', 'fc-cache', 'iceauth', 'cvt', 'xcutsel', 'bdftopcf', 'fc-cat', 'xsetpointer', 'xkbevd', 'quartz-wm', 'xsm', 'appres', 'xset', 'xlsatoms', 'fc-match', 'oclock', 'x11perfcomp', 'resize', 'showfont', 'xditview', 'xwininfo', 'xvinfo', 'xcalc', 'xgamma', 'makedepend', 'viewres', 'ico', 'X', 'gccmakedep', 'xedit', 'smproxy', 'xkill', 'xkbcomp', 'xload', 'font_cache', 'xmh', 'xlogo', 'fstobdf', 'uxterm', 'fc-scan'] Path provided by --with-executables-search-path ['win32fe.exe', 'win32feutils.dll'] child config.sourceControl 0.017872 ================================================================================ TEST configureInstallationMethod from PETSc.options.petscclone(/Users/kongf/projects/moose6/petsc/config/PETSc/options/petscclone.py:20) TESTING: configureInstallationMethod from PETSc.options.petscclone(config/PETSc/options/petscclone.py:20) lib/petsc/bin/maint exists. This appears to be a repository clone .git directory exists Running Executable WITHOUT threads to time it out Executing: ['git', 'describe', '--match=v*'] stdout: v3.14.4 Running Executable WITHOUT threads to time it out Executing: ['git', 'log', '-1', '--pretty=format:%H'] stdout: ca8c967e29bc995fdad3f17e46f56229b985d1fa Running Executable WITHOUT threads to time it out Executing: ['git', 'log', '-1', '--pretty=format:%ci'] stdout: 2021-02-03 10:41:07 -0600 Running Executable WITHOUT threads to time it out Executing: ['git', 'branch'] stdout: * 3.14.4 main Defined "VERSION_GIT" to ""v3.14.4"" Defined "VERSION_DATE_GIT" to ""2021-02-03 10:41:07 -0600"" Defined "VERSION_BRANCH_GIT" to ""3.14.4"" child PETSc.options.petscclone 0.052917 ================================================================================ TEST setNativeArchitecture from PETSc.options.arch(/Users/kongf/projects/moose6/petsc/config/PETSc/options/arch.py:31) TESTING: setNativeArchitecture from PETSc.options.arch(config/PETSc/options/arch.py:31) ================================================================================ TEST configureArchitecture from PETSc.options.arch(/Users/kongf/projects/moose6/petsc/config/PETSc/options/arch.py:43) TESTING: configureArchitecture from PETSc.options.arch(config/PETSc/options/arch.py:43) Checks PETSC_ARCH and sets if not set No previous hashfile found Setting hashfile: arch-darwin-c-opt/lib/petsc/conf/configure-hash Deleting configure hash file: arch-darwin-c-opt/lib/petsc/conf/configure-hash Unable to delete configure hash file: arch-darwin-c-opt/lib/petsc/conf/configure-hash child PETSc.options.arch 0.015078 ================================================================================ TEST setInstallDir from PETSc.options.installDir(/Users/kongf/projects/moose6/petsc/config/PETSc/options/installDir.py:39) TESTING: setInstallDir from PETSc.options.installDir(config/PETSc/options/installDir.py:39) setup installDir to either prefix or if that is not set to PETSC_DIR/PETSC_ARCH Defined make macro "PREFIXDIR" to "/Users/kongf/projects/moose6/petsc/arch-darwin-c-opt" ================================================================================ TEST saveReconfigure from PETSc.options.installDir(/Users/kongf/projects/moose6/petsc/config/PETSc/options/installDir.py:85) TESTING: saveReconfigure from PETSc.options.installDir(config/PETSc/options/installDir.py:85) ================================================================================ TEST cleanConfDir from PETSc.options.installDir(/Users/kongf/projects/moose6/petsc/config/PETSc/options/installDir.py:78) TESTING: cleanConfDir from PETSc.options.installDir(config/PETSc/options/installDir.py:78) ================================================================================ TEST configureInstallDir from PETSc.options.installDir(/Users/kongf/projects/moose6/petsc/config/PETSc/options/installDir.py:62) TESTING: configureInstallDir from PETSc.options.installDir(config/PETSc/options/installDir.py:62) Makes installDir subdirectories if it does not exist for both prefix install location and PETSc work install location Changed persistence directory to /Users/kongf/projects/moose6/petsc/arch-darwin-c-opt/lib/petsc/conf ================================================================================ TEST restoreReconfigure from PETSc.options.installDir(/Users/kongf/projects/moose6/petsc/config/PETSc/options/installDir.py:98) TESTING: restoreReconfigure from PETSc.options.installDir(config/PETSc/options/installDir.py:98) child PETSc.options.installDir 0.001097 ================================================================================ TEST setExternalPackagesDir from PETSc.options.externalpackagesdir(/Users/kongf/projects/moose6/petsc/config/PETSc/options/externalpackagesdir.py:15) TESTING: setExternalPackagesDir from PETSc.options.externalpackagesdir(config/PETSc/options/externalpackagesdir.py:15) ================================================================================ TEST cleanExternalpackagesDir from PETSc.options.externalpackagesdir(/Users/kongf/projects/moose6/petsc/config/PETSc/options/externalpackagesdir.py:22) TESTING: cleanExternalpackagesDir from PETSc.options.externalpackagesdir(config/PETSc/options/externalpackagesdir.py:22) child PETSc.options.externalpackagesdir 0.000297 ================================================================================ TEST configureCLanguage from PETSc.options.languages(/Users/kongf/projects/moose6/petsc/config/PETSc/options/languages.py:27) TESTING: configureCLanguage from PETSc.options.languages(config/PETSc/options/languages.py:27) Choose whether to compile the PETSc library using a C or C++ compiler C language is C Defined "CLANGUAGE_C" to "1" Defined make macro "CLANGUAGE" to "C" child PETSc.options.languages 0.000589 ================================================================================ TEST printEnvVariables from config.setCompilers(/Users/kongf/projects/moose6/petsc/config/BuildSystem/config/setCompilers.py:1907) TESTING: printEnvVariables from config.setCompilers(config/BuildSystem/config/setCompilers.py:1907) **** printenv **** AS=/Users/kongf/miniconda3/envs/testpetsc/bin/x86_64-apple-darwin13.4.0-as AR=/Users/kongf/miniconda3/envs/testpetsc/bin/x86_64-apple-darwin13.4.0-ar MOOSE_NO_CODESIGN=true ac_cv_func_malloc_0_nonnull=yes TERM_PROGRAM=Apple_Terminal ac_cv_func_realloc_0_nonnull=yes OBJC=x86_64-apple-darwin13.4.0-clang HOST=x86_64-apple-darwin13.4.0 TERM=xterm-256color SHELL=/bin/zsh NM=/Users/kongf/miniconda3/envs/testpetsc/bin/x86_64-apple-darwin13.4.0-nm TMPDIR=/var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/ PAGESTUFF=/Users/kongf/miniconda3/envs/testpetsc/bin/x86_64-apple-darwin13.4.0-pagestuff CONDA_SHLVL=3 LIPO=/Users/kongf/miniconda3/envs/testpetsc/bin/x86_64-apple-darwin13.4.0-lipo CONDA_PROMPT_MODIFIER=(testpetsc) TERM_PROGRAM_VERSION=433 SIZE=/Users/kongf/miniconda3/envs/testpetsc/bin/x86_64-apple-darwin13.4.0-size NMEDIT=/Users/kongf/miniconda3/envs/testpetsc/bin/x86_64-apple-darwin13.4.0-nmedit SDKROOT=/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk TERM_SESSION_ID=ED11BC7E-06EC-4190-9437-BB3B91227090 CXX_FOR_BUILD=/Users/kongf/miniconda3/envs/testpetsc/bin/x86_64-apple-darwin13.4.0-clang++ INSTALL_NAME_TOOL=/Users/kongf/miniconda3/envs/testpetsc/bin/x86_64-apple-darwin13.4.0-install_name_tool SEGEDIT=/Users/kongf/miniconda3/envs/testpetsc/bin/x86_64-apple-darwin13.4.0-segedit GFORTRAN=/Users/kongf/miniconda3/envs/testpetsc/bin/x86_64-apple-darwin13.4.0-gfortran SEG_HACK=/Users/kongf/miniconda3/envs/testpetsc/bin/x86_64-apple-darwin13.4.0-seg_hack USER=kongf CLANGXX=/Users/kongf/miniconda3/envs/testpetsc/bin/x86_64-apple-darwin13.4.0-clang++ LIBTOOL=/Users/kongf/miniconda3/envs/testpetsc/bin/x86_64-apple-darwin13.4.0-libtool CONDA_BACKUP_HOST=x86_64-apple-darwin13.4.0 FC_FOR_BUILD=/Users/kongf/miniconda3/envs/testpetsc/bin/-gfortran CONDA_EXE=/Users/kongf/miniconda3/bin/conda OTOOL=/Users/kongf/miniconda3/envs/testpetsc/bin/x86_64-apple-darwin13.4.0-otool SSH_AUTH_SOCK=/private/tmp/com.apple.launchd.PNJFMG6wgD/Listeners CONDA_BUILD_SYSROOT=/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk STRINGS=/Users/kongf/miniconda3/envs/testpetsc/bin/x86_64-apple-darwin13.4.0-strings CONDA_BACKUP_LDFLAGS= -Wl,-rpath,/Users/kongf/miniconda3/envs/moose/lib -L/Users/kongf/miniconda3/envs/moose/lib _CE_CONDA= CHECKSYMS=/Users/kongf/miniconda3/envs/testpetsc/bin/x86_64-apple-darwin13.4.0-checksyms CONDA_PREFIX_1=/Users/kongf/miniconda3 PATH=/Users/kongf/miniconda3/envs/testpetsc/bin:/Users/kongf/miniconda3/condabin:/usr/local/bin:/usr/bin:/bin:/usr/sbin:/sbin:/Library/TeX/texbin:/opt/X11/bin MESON_ARGS=--buildtype release CONDA_PREFIX_2=/Users/kongf/miniconda3/envs/moose LaunchInstanceID=0C47B423-0BDF-4D3A-AF27-2EE90CFC90C7 BUILD=x86_64-apple-darwin13.4.0 LD=/Users/kongf/miniconda3/envs/testpetsc/bin/x86_64-apple-darwin13.4.0-ld CONDA_PREFIX=/Users/kongf/miniconda3/envs/testpetsc F90=mpif90 PWD=/Users/kongf/projects/moose6/petsc STRIP=/Users/kongf/miniconda3/envs/testpetsc/bin/x86_64-apple-darwin13.4.0-strip CMAKE_ARGS=-DCMAKE_AR=/Users/kongf/miniconda3/envs/testpetsc/bin/x86_64-apple-darwin13.4.0-ar -DCMAKE_RANLIB=/Users/kongf/miniconda3/envs/testpetsc/bin/x86_64-apple-darwin13.4.0-ranlib -DCMAKE_LINKER=/Users/kongf/miniconda3/envs/testpetsc/bin/x86_64-apple-darwin13.4.0-ld -DCMAKE_STRIP=/Users/kongf/miniconda3/envs/testpetsc/bin/x86_64-apple-darwin13.4.0-strip -DCMAKE_INSTALL_NAME_TOOL=/Users/kongf/miniconda3/envs/testpetsc/bin/x86_64-apple-darwin13.4.0-install_name_tool -DCMAKE_LIBTOOL=/Users/kongf/miniconda3/envs/testpetsc/bin/x86_64-apple-darwin13.4.0-libtool -DCMAKE_OSX_DEPLOYMENT_TARGET= -DCMAKE_BUILD_TYPE=Release -DCMAKE_OSX_SYSROOT=/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk F95=/Users/kongf/miniconda3/envs/testpetsc/bin/x86_64-apple-darwin13.4.0-gfortran LANG=en_US.UTF-8 XPC_FLAGS=0x0 F77=mpif77 REDO_PREBINDING=/Users/kongf/miniconda3/envs/testpetsc/bin/x86_64-apple-darwin13.4.0-redo_prebinding CXX=mpicxx CC_FOR_BUILD=/Users/kongf/miniconda3/envs/testpetsc/bin/x86_64-apple-darwin13.4.0-clang CLANG=/Users/kongf/miniconda3/envs/testpetsc/bin/x86_64-apple-darwin13.4.0-clang _CE_M= XPC_SERVICE_NAME=0 HOME=/Users/kongf SHLVL=1 MPIHOME=/Users/kongf/miniconda3/envs/testpetsc _CONDA_PYTHON_SYSCONFIGDATA_NAME=_sysconfigdata_x86_64_apple_darwin13_4_0 FC=mpif90 INDR=/Users/kongf/miniconda3/envs/testpetsc/bin/x86_64-apple-darwin13.4.0-indr CONDA_PYTHON_EXE=/Users/kongf/miniconda3/bin/python LOGNAME=kongf build_alias=x86_64-apple-darwin13.4.0 CONDA_DEFAULT_ENV=testpetsc RANLIB=/Users/kongf/miniconda3/envs/testpetsc/bin/x86_64-apple-darwin13.4.0-ranlib CMAKE_PREFIX_PATH=:/Users/kongf/miniconda3/envs/testpetsc CC=mpicc SEG_ADDR_TABLE=/Users/kongf/miniconda3/envs/testpetsc/bin/x86_64-apple-darwin13.4.0-seg_addr_table DISPLAY=/private/tmp/com.apple.launchd.SlcmI3Q7IJ/org.macosforge.xquartz:0 host_alias=x86_64-apple-darwin13.4.0 LDFLAGS_LD=-pie -headerpad_max_install_names -dead_strip_dylibs -rpath /Users/kongf/miniconda3/envs/testpetsc/lib -L/Users/kongf/miniconda3/envs/testpetsc/lib SECURITYSESSIONID=186a6 OBJC_FOR_BUILD=/Users/kongf/miniconda3/envs/testpetsc/bin/x86_64-apple-darwin13.4.0-clang __CF_USER_TEXT_ENCODING=0x1F5:0x0:0x0 __PYVENV_LAUNCHER__=/Applications/Xcode.app/Contents/Developer/usr/bin/python3 ================================================================================ TEST resetEnvCompilers from config.setCompilers(/Users/kongf/projects/moose6/petsc/config/BuildSystem/config/setCompilers.py:1914) TESTING: resetEnvCompilers from config.setCompilers(config/BuildSystem/config/setCompilers.py:1914) =============================================================================== ***** WARNING: CC (set to mpicc) found in environment variables - ignoring use ./configure CC=$CC if you really want to use that value ****** =============================================================================== =============================================================================== ***** WARNING: CXX (set to mpicxx) found in environment variables - ignoring use ./configure CXX=$CXX if you really want to use that value ****** =============================================================================== =============================================================================== ***** WARNING: FC (set to mpif90) found in environment variables - ignoring use ./configure FC=$FC if you really want to use that value ****** =============================================================================== =============================================================================== ***** WARNING: F77 (set to mpif77) found in environment variables - ignoring use ./configure F77=$F77 if you really want to use that value ****** =============================================================================== =============================================================================== ***** WARNING: F90 (set to mpif90) found in environment variables - ignoring use ./configure F90=$F90 if you really want to use that value ****** =============================================================================== =============================================================================== ***** WARNING: AR (set to /Users/kongf/miniconda3/envs/testpetsc/bin/x86_64-apple-darwin13.4.0-ar) found in environment variables - ignoring use ./configure AR=$AR if you really want to use that value ****** =============================================================================== =============================================================================== ***** WARNING: RANLIB (set to /Users/kongf/miniconda3/envs/testpetsc/bin/x86_64-apple-darwin13.4.0-ranlib) found in environment variables - ignoring use ./configure RANLIB=$RANLIB if you really want to use that value ****** =============================================================================== ================================================================================ TEST checkEnvCompilers from config.setCompilers(/Users/kongf/projects/moose6/petsc/config/BuildSystem/config/setCompilers.py:1944) TESTING: checkEnvCompilers from config.setCompilers(config/BuildSystem/config/setCompilers.py:1944) ================================================================================ TEST checkMPICompilerOverride from config.setCompilers(/Users/kongf/projects/moose6/petsc/config/BuildSystem/config/setCompilers.py:1877) TESTING: checkMPICompilerOverride from config.setCompilers(config/BuildSystem/config/setCompilers.py:1877) Check if --with-mpi-dir is used along with CC CXX or FC compiler options. This usually prevents mpi compilers from being used - so issue a warning ================================================================================ TEST requireMpiLdPath from config.setCompilers(/Users/kongf/projects/moose6/petsc/config/BuildSystem/config/setCompilers.py:1898) TESTING: requireMpiLdPath from config.setCompilers(config/BuildSystem/config/setCompilers.py:1898) OpenMPI wrappers require LD_LIBRARY_PATH set ================================================================================ TEST checkInitialFlags from config.setCompilers(/Users/kongf/projects/moose6/petsc/config/BuildSystem/config/setCompilers.py:479) TESTING: checkInitialFlags from config.setCompilers(config/BuildSystem/config/setCompilers.py:479) Initialize the compiler and linker flags Initialized CFLAGS to Initialized CFLAGS to Initialized LDFLAGS to Initialized CUDAFLAGS to Initialized CUDAFLAGS to Initialized LDFLAGS to Initialized HIPCCFLAGS to Initialized HIPCCFLAGS to Initialized LDFLAGS to Initialized SYCLCXXFLAGS to Initialized SYCLCXXFLAGS to Initialized LDFLAGS to Initialized CXXFLAGS to Initialized CXX_CXXFLAGS to Initialized LDFLAGS to Initialized FFLAGS to Initialized FFLAGS to Initialized LDFLAGS to Initialized CPPFLAGS to Initialized FPPFLAGS to Initialized CUDAPPFLAGS to -Wno-deprecated-gpu-targets Initialized CXXPPFLAGS to Initialized HIPPPFLAGS to -Wno-deprecated-gpu-targets Initialized SYCLPPFLAGS to -Wno-deprecated-gpu-targets Initialized CC_LINKER_FLAGS to [] Initialized CXX_LINKER_FLAGS to [] Initialized FC_LINKER_FLAGS to [] Initialized CUDAC_LINKER_FLAGS to [] Initialized HIPCC_LINKER_FLAGS to [] Initialized SYCLCXX_LINKER_FLAGS to [] Initialized sharedLibraryFlags to [] Initialized dynamicLibraryFlags to [] ================================================================================ TEST checkCCompiler from config.setCompilers(/Users/kongf/projects/moose6/petsc/config/BuildSystem/config/setCompilers.py:660) TESTING: checkCCompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:660) Locate a functional C compiler Checking for program /Users/kongf/miniconda3/envs/testpetsc/bin/mpiicc...not found Checking for program /Users/kongf/projects/moose6/petsc/lib/petsc/bin/win32fe/mpiicc...not found Unable to find programs ['mpiicc'] providing listing of each search directory to help debug Path provided in Python program ['x86_64-apple-darwin13.4.0-pagestuff', 'llvm-opt-report', 'llvm-lipo', 'modularize', 'llvm-cxxdump', 'mpif90', 'clang-change-namespace', 'verify-uselistorder', 'llvm-cvtres', 'x86_64-apple-darwin13.4.0-check_dylib', 'hydra_pmi_proxy', 'llvm-strings', 'clang-move', 'x86_64-apple-darwin13.4.0-ranlib', 'llvm-install-name-tool', 'clangd-xpc-test-client', 'clang', 'llvm-lto2', 'x86_64-apple-darwin13.4.0-nmedit', 'mpirun', 'llvm-cfi-verify', 'llvm-cov', 'x86_64-apple-darwin13.4.0-install_name_tool', 'llc', 'gfortran', 'llvm-link', 'llvm-symbolizer', 'llvm-objdump', 'x86_64-apple-darwin13.4.0-strings', 'clang-refactor', 'clang-rename', 'x86_64-apple-darwin13.4.0-mtoc', 'clangd', 'llvm-mca', 'set-xcode-analyzer', 'iconv', 'llvm-rc', '-clang++', 'mpiexec.hydra', 'clang-include-fixer', 'x86_64-apple-darwin13.4.0-libtool', 'x86_64-apple-darwin13.4.0-lipo', 'x86_64-apple-darwin13.4.0-vtool', 'llvm-addr2line', 'llvm-jitlink', 'x86_64-apple-darwin13.4.0-as', 'llvm-xray', 'x86_64-apple-darwin13.4.0-size', 'clang-format', 'llvm-rtdyld', 'x86_64-apple-darwin13.4.0-codesign_allocate', 'clang-check', 'llvm-lto', 'pp-trace', 'llvm-c-test', 'x86_64-apple-darwin13.4.0-seg_hack', 'x86_64-apple-darwin13.4.0-ar', 'c-index-test', 'llvm-dwp', 'x86_64-apple-darwin13.4.0-segedit', 'x86_64-apple-darwin13.4.0-redo_prebinding', 'x86_64-apple-darwin13.4.0-nm', 'x86_64-apple-darwin13.4.0-clang', 'llvm-reduce', 'llvm-elfabi', 'x86_64-apple-darwin13.4.0-checksyms', 'llvm-mc', 'mpivars', 'clang-reorder-fields', 'x86_64-apple-darwin13.4.0-strip', 'llvm-exegesis', 'x86_64-apple-darwin13.4.0-cmpdylib', 'llvm-readelf', 'llvm-as', 'clang-query', 'scan-build', 'llvm-nm', 'llvm-lib', 'llvm-undname', 'x86_64-apple-darwin13.4.0-unwinddump', 'mpif77', 'x86_64-apple-darwin13.4.0-ObjectDump', 'llvm-ml', 'clang-offload-bundler', 'x86_64-apple-darwin13.4.0-inout', 'llvm-ar', 'find-all-symbols', 'clang-cl', 'llvm-dis', 'x86_64-apple-darwin13.4.0-makerelocs', 'llvm-size', 'mpichversion', 'x86_64-apple-darwin13.4.0-clang++', 'mpicc', 'dsymutil', 'obj2yaml', 'x86_64-apple-darwin13.4.0-bitcode_strip', 'x86_64-apple-darwin13.4.0-machocheck', 'clang-tidy', 'llvm-dlltool', 'llvm-readobj', 'llvm-cxxfilt', 'bugpoint', 'llvm-pdbutil', 'clang-offload-wrapper', 'clang-doc', 'llvm-ifs', 'parkill', 'lli', 'llvm-tblgen', 'mpicxx', 'clang-scan-deps', 'x86_64-apple-darwin13.4.0-dyldinfo', 'x86_64-apple-darwin13.4.0-ctf_insert', 'clang++', 'x86_64-apple-darwin13.4.0-mtor', 'sancov', 'x86_64-apple-darwin13.4.0-gfortran', 'x86_64-apple-darwin13.4.0-ld', 'llvm-dwarfdump', 'opt', 'ldid', 'clang-cpp', 'clang-11', 'clang-extdef-mapping', 'llvm-cat', 'git-clang-format', 'llvm-profdata', 'clang-apply-replacements', 'llvm-objcopy', 'llvm-extract', 'yaml2obj', 'sanstats', 'x86_64-apple-darwin13.4.0-otool', 'llvm-split', 'llvm-bcanalyzer', 'hydra_persist', 'mpiexec', 'hmaptool', 'llvm-stress', 'llvm-diff', 'x86_64-apple-darwin13.4.0-seg_addr_table', 'scan-view', 'diagtool', 'mpic++', 'mpifort', 'llvm-modextract', 'hydra_nameserver', 'llvm-gsymutil', 'llvm-strip', 'llvm-mt', 'x86_64-apple-darwin13.4.0-indr', 'llvm-ranlib', 'llvm-cxxmap'] Path provided by --with-executables-search-path ['win32fe.exe', 'win32feutils.dll'] Checking for program /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc...found Defined make macro "CC" to "/Users/kongf/miniconda3/envs/testpetsc/bin/mpicc" All intermediate test results are stored in /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk All intermediate test results are stored in /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -c -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o -I/var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -c -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o -I/var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -c -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o -I/var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o -lpetsc-ufod4vtr9mqHvKIQiVAm Possible ERROR while running linker: exit code 1 stderr: ld: library not found for -lpetsc-ufod4vtr9mqHvKIQiVAm clang-11: error: linker command failed with exit code 1 (use -v to see invocation) Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -c -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o -I/var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o Testing executable /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest to see if it can be run Executing: /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest Running Executable with threads to time it out at 60 Executing: /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc --version stdout: clang version 11.0.0 Target: x86_64-apple-darwin13.4.0 Thread model: posix InstalledDir: /Users/kongf/miniconda3/envs/testpetsc/bin Since MPI c compiler starts with mpi, force searches for other compilers to only look for MPI compilers ================================================================================ TEST checkCPreprocessor from config.setCompilers(/Users/kongf/projects/moose6/petsc/config/BuildSystem/config/setCompilers.py:699) TESTING: checkCPreprocessor from config.setCompilers(config/BuildSystem/config/setCompilers.py:699) Locate a functional C preprocessor Checking for program /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc...found Defined make macro "CPP" to "/Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -E" Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -E -I/var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.c Preprocess stderr before filtering: : Preprocess stderr after filtering: : ================================================================================ TEST checkCUDACompiler from config.setCompilers(/Users/kongf/projects/moose6/petsc/config/BuildSystem/config/setCompilers.py:735) TESTING: checkCUDACompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:735) Locate a functional CUDA compiler Checking for program /Users/kongf/miniconda3/envs/testpetsc/bin/nvcc...not found Checking for program /Users/kongf/miniconda3/condabin/nvcc...not found Checking for program /usr/local/bin/nvcc...not found Checking for program /usr/bin/nvcc...not found Checking for program /bin/nvcc...not found Checking for program /usr/sbin/nvcc...not found Checking for program /sbin/nvcc...not found Checking for program /Library/TeX/texbin/nvcc...not found Checking for program /opt/X11/bin/nvcc...not found Checking for program /Users/kongf/projects/moose6/petsc/lib/petsc/bin/win32fe/nvcc...not found Unable to find programs ['nvcc'] providing listing of each search directory to help debug Path provided in Python program Path provided by default path ['x86_64-apple-darwin13.4.0-pagestuff', 'llvm-opt-report', 'llvm-lipo', 'modularize', 'llvm-cxxdump', 'mpif90', 'clang-change-namespace', 'verify-uselistorder', 'llvm-cvtres', 'x86_64-apple-darwin13.4.0-check_dylib', 'hydra_pmi_proxy', 'llvm-strings', 'clang-move', 'x86_64-apple-darwin13.4.0-ranlib', 'llvm-install-name-tool', 'clangd-xpc-test-client', 'clang', 'llvm-lto2', 'x86_64-apple-darwin13.4.0-nmedit', 'mpirun', 'llvm-cfi-verify', 'llvm-cov', 'x86_64-apple-darwin13.4.0-install_name_tool', 'llc', 'gfortran', 'llvm-link', 'llvm-symbolizer', 'llvm-objdump', 'x86_64-apple-darwin13.4.0-strings', 'clang-refactor', 'clang-rename', 'x86_64-apple-darwin13.4.0-mtoc', 'clangd', 'llvm-mca', 'set-xcode-analyzer', 'iconv', 'llvm-rc', '-clang++', 'mpiexec.hydra', 'clang-include-fixer', 'x86_64-apple-darwin13.4.0-libtool', 'x86_64-apple-darwin13.4.0-lipo', 'x86_64-apple-darwin13.4.0-vtool', 'llvm-addr2line', 'llvm-jitlink', 'x86_64-apple-darwin13.4.0-as', 'llvm-xray', 'x86_64-apple-darwin13.4.0-size', 'clang-format', 'llvm-rtdyld', 'x86_64-apple-darwin13.4.0-codesign_allocate', 'clang-check', 'llvm-lto', 'pp-trace', 'llvm-c-test', 'x86_64-apple-darwin13.4.0-seg_hack', 'x86_64-apple-darwin13.4.0-ar', 'c-index-test', 'llvm-dwp', 'x86_64-apple-darwin13.4.0-segedit', 'x86_64-apple-darwin13.4.0-redo_prebinding', 'x86_64-apple-darwin13.4.0-nm', 'x86_64-apple-darwin13.4.0-clang', 'llvm-reduce', 'llvm-elfabi', 'x86_64-apple-darwin13.4.0-checksyms', 'llvm-mc', 'mpivars', 'clang-reorder-fields', 'x86_64-apple-darwin13.4.0-strip', 'llvm-exegesis', 'x86_64-apple-darwin13.4.0-cmpdylib', 'llvm-readelf', 'llvm-as', 'clang-query', 'scan-build', 'llvm-nm', 'llvm-lib', 'llvm-undname', 'x86_64-apple-darwin13.4.0-unwinddump', 'mpif77', 'x86_64-apple-darwin13.4.0-ObjectDump', 'llvm-ml', 'clang-offload-bundler', 'x86_64-apple-darwin13.4.0-inout', 'llvm-ar', 'find-all-symbols', 'clang-cl', 'llvm-dis', 'x86_64-apple-darwin13.4.0-makerelocs', 'llvm-size', 'mpichversion', 'x86_64-apple-darwin13.4.0-clang++', 'mpicc', 'dsymutil', 'obj2yaml', 'x86_64-apple-darwin13.4.0-bitcode_strip', 'x86_64-apple-darwin13.4.0-machocheck', 'clang-tidy', 'llvm-dlltool', 'llvm-readobj', 'llvm-cxxfilt', 'bugpoint', 'llvm-pdbutil', 'clang-offload-wrapper', 'clang-doc', 'llvm-ifs', 'parkill', 'lli', 'llvm-tblgen', 'mpicxx', 'clang-scan-deps', 'x86_64-apple-darwin13.4.0-dyldinfo', 'x86_64-apple-darwin13.4.0-ctf_insert', 'clang++', 'x86_64-apple-darwin13.4.0-mtor', 'sancov', 'x86_64-apple-darwin13.4.0-gfortran', 'x86_64-apple-darwin13.4.0-ld', 'llvm-dwarfdump', 'opt', 'ldid', 'clang-cpp', 'clang-11', 'clang-extdef-mapping', 'llvm-cat', 'git-clang-format', 'llvm-profdata', 'clang-apply-replacements', 'llvm-objcopy', 'llvm-extract', 'yaml2obj', 'sanstats', 'x86_64-apple-darwin13.4.0-otool', 'llvm-split', 'llvm-bcanalyzer', 'hydra_persist', 'mpiexec', 'hmaptool', 'llvm-stress', 'llvm-diff', 'x86_64-apple-darwin13.4.0-seg_addr_table', 'scan-view', 'diagtool', 'mpic++', 'mpifort', 'llvm-modextract', 'hydra_nameserver', 'llvm-gsymutil', 'llvm-strip', 'llvm-mt', 'x86_64-apple-darwin13.4.0-indr', 'llvm-ranlib', 'llvm-cxxmap'] ['conda'] ['dvipdf', 'ps2ps', 'gs-noX11', 'gs', 'apm', 'atom', 'ps2pdfwr', 'ps2pdf12', 'gsdj', 'pdf2dsc', 'ps2pdf14', 'gsnd', 'ps2pdf13', 'gs-X11', 'pphs', 'gsdj500', 'ps2ascii', 'ps2pdf', 'pf2afm', 'pfbtopfa', 'gslp', 'printafm', 'ps2ps2', 'gslj', 'ps2epsi', 'gsbj', 'unix-lpr.sh', 'pdf2ps', 'eps2eps', 'lprsetup.sh'] ['uux', 'cpan', 'BuildStrings', 'loads.d', 'write', 'indent', 'bzip2recover', 'hdiutil', 'top', 'javah', 'pstruct5.18', 'tee', 'binhex5.18.pl', 'xip', 'wsimport', 'bzfgrep', 'qlmanage', 'snmptranslate', 'split', 'chsh', 'stty.pl', 'xml2man', 'iprofiler', 'man', 'lpoptions', 'tabs', 'smtpd2.7.py', 'rview', 'lsvfs', 'zgrep', 'dbiprof', 'zmore', 'corelist5.28', 'cpanp-run-perl', 'gcov', 'iptab5.28', 'svn', 'vim', 'idle2.7', 'macerror5.18', 'xjc', 'lwp-request5.18', 'bzmore', 'package-stash-conflicts', 'cancel', 'apply', 'bzgrep', 'umask', 'g++', 'libtool', 'pre-grohtml', 'colcrt', 'phpize', 'unalias', 'mp2bug', 'groff', 'mkfifo', 'toe', 'hexdump', 'spfd5.18', 'idle', 'crc325.18', 'Rez', 'cap_mkdb', 'ictool', 'cmp', 'syscallbypid.d', 'snmpset', 'locate', 'binhex5.28.pl', 'afconvert', 'afclip', 'bzegrep', 'neqn', 'instmodsh', 'extcheck', 'javapackager', 'pl', 'compress', 'corelist5.18', 'fddist', 'db_upgrade', 'diagnose-fu', 'ctags', 'iptab5.18', 'zdiff', 'macerror5.28', 'pathchk', 'mesg', 'setregion', 'perlivp', 'c++', 'pod2readme', 'vi', 'iofileb.d', 'errinfo', 'zipgrep', 'pod2usage', 'alias', 'wait', 'psed5.18', 'safaridriver', 'bzdiff', 'lwp-request5.28', 'unpack200', 'corelist', 'expand', 'strings', 'appletviewer', 'idlj', 'wall', 'spfd5.28', 'brctl', 'crc325.28', 'gm4', 'db_hotbackup', 'auvaltool', 'applesingle', 'clang', 'ibtool', 'tty', 'git-receive-pack', 'infotocap', 'pkill', 'pwhich5.18', 'cups-config', 'basename', 'nclist', 'objdump', 'install', 'native2ascii', 'c99', 'desdp', 'binhex', 'lsmp', 'xmllint', 'texi2pdf', 'last', 'vm_stat', 'syslog', 'spfquery5.18', 'net-snmp-cert', 'nslookup', 'prove5.18', 'vimdiff', 'topsyscall', 'cpan2dist5.18', '2to3-2.7', 'libnetcfg', 'c++filt', 'avbdiagnose', 'nice', 'perlivp5.18', 'xcscontrol', 'calendar', 'locale', 'strip', 'symbolscache', 'tfmtodit', 'trace', 'tops', 'lprm', 'tiffutil', 'du', 'diff3', 'cupstestppd', 'sw_vers', 'fs_usage', 'host', 's2p5.18', 'jarsigner', 'app-sso', 'grolbp', 'nscurl', 'logger', 'caffeinate', 'say', 'net-snmp-create-v3-user', 'lwp-download5.18', 'plutil', 'python3', 'avbutil', 'enc2xs5.28', 'xcode-select', 'powermetrics', 'moose-outdated', 'c2ph', 'net-server', 'cvmkdir', 'ldapmodify', 'iofile.d', 'join', 'SafeEjectGPU', 'snmpdelta', 'ssh-keyscan', 'phar.phar', 'renice', 'xxd', 'scandeps.pl', 'nettop', 'ppdmerge', 'snmpconf', 'xsltproc', 'osascript', 'pwhich5.28', 'troff', 'iotop', 'mmroff', 'lex', 'encguess', 'ctf_insert', 'csplit', 'iconv', 'captoinfo', 'snmpinform', 'lsbom', 'pbcopy', 'sort', 'xpath', 'snmpdf', 'whoami', 'sc_usage', 'jot', 'spfquery5.28', 'ocspcheck', 'prove5.28', 'mkbom', 'groffer', 'ldapurl', 'json_xs', 'pkgbuild', 'perlivp5.28', 'cpuwalk.d', 'cvmkfile', 'update_dyld_shared_cache', 'easy_install', 'pydoc', 'ldapmodrdn', 'systemextensionsctl', 'file', 'db_printlog', 'python', 'hash', 'bc', 'fontrestore', 'mg', 'python2', 'cpanp-run-perl5.18', 'sfltool', 'less', 'pod2latex', 'bunzip2', 'pythonw', 'touch', 'asctl', 'rmic', 'dispqlen.d', 'db_archive', 'refer', 'getopt', 'krb5-config', 'security', 'lwp-download5.28', 'hiutil', 'csdiagnose', 'pip3', 'enc2xs5.18', 'lastwords', 'rmid', 'stty5.28.pl', 'podchecker5.18', 'sed', 'ld', 'awk', 'ip2cc', 'syscallbyproc.d', 'snmpstatus', 'uudecode', 'UnRezWack', 'fmt', 'perlthanks5.18', 'zipdetails5.28', 'zless', 'xslt-config', 'sdef', 'pod2man5.18', 'ncctl', 'jmc', 'encguess5.28', 'pod2text', 'c2ph5.18', 'bashbug', 'mail', 'chpass', 'sips', 'xcrun', 'bzcmp', 'lldb', 'python2.7-config', 'piconv5.28', 'chfn', 'ipcount', 'newaliases', 'nano', 'eyapp5.18', 'pfbtops', 'lam', 'ipptool', 'irb', 'ipcount5.28', 'ptardiff', 'bzless', 'perlbug5.28', 'sysdiagnose', 'logname', 'tset', 'chgrp', 'cu', 'grops', 'printenv', 'unvis', 'grotty', 'atq', 'seq', 'fc', 'AssetCacheManagerUtil', 'colldef', 'jdb', 'wish', 'uname', 'hpmdiagnose', 'timer_analyser.d', 'jstack', 'unzip', 'stty5.18.pl', 'db_stat', 'rmiregistry', 'json_pp', 'zprint', 'kinit', 'mib2c', 'podchecker5.28', 'od', 'bsdtar', 'perl', 'findrule', 'tbtdiagnose', 'mcxquery', 'lwp-download', 'ppdpo', 'crontab', 'reset', 'kextutil', 'bzcat', 'dbicadmin', 'ex', 'perlthanks5.28', 'perlbug', 'zipdetails5.18', 'jvisualvm', 'footprint', 'pod2man5.28', 'config_data5.18', 'json_xs5.28', 'lsappinfo', 'eqn', 'db_load', 'fwkdp', 'piconv', 'read', 'ipcount5.18', 'perlbug5.18', 'snmpusm', 'piconv5.18', 'execsnoop', 'pagesize', 'lp', 'base64', 'ptargrep', 'eyapp5.28', 'jar', 'h2ph', 'readlink', 'opensnoop', 'rake', 'rvim', 'jcmd', 'dmc', 'vimtutor', 'phar', 'from', 'prove', 'newproc.d', 'gencat', 'darwinup', 'mdutil', 'znew', 'podchecker', 'mcxrefresh', 'colrm', 'dbilogstrip', 'pagestuff', 'crlrefresh', 'headerdoc2html', 'lwp-dump5.18', 'tbl', 'jrunscript', 'find2perl', 'filtercalltree', 'afhash', 'sandbox-exec', 'snmpvacm', 'stapler', 'fwkpfv', 'sftp', 'wc', 'jps', 'rsync', 'osacompile', 'cpanp5.18', 'hdxml2manxml', 'gzcat', 'dbiproxy5.18', 'delv', 'thermal', 'pico', 'podselect5.18', 'pydoc2.7', 'shasum', 'comm', 'resolveLinks', 'lpq', 'java', 'bundle', 'gzip', 'zipcloak', 'git-upload-archive', 'xml2-config', 'encode_keychange', 'traptoemail', 'gcc', 'smbutil', 'diff', 'ri', 'pythonw2.7', 'agvtool', 'cksum', 'indxbib', 'segedit', 'zipnote', 'ptar', 'printf', 'soelim', 'AssetCacheTetheratorUtil', 'column', 'ldapexop', 'ippfind', 'syscallbysysc.d', 'groups', 'dwarfdump', 'ppdc', 'rs', 'spfd', 'config_data', 'slogin', 'latency', 'lsm', 'xar', 'db_codegen', 'dns-sd', 'lwp-dump5.28', 'tab2space', 'dbiproxy5.28', 'avconvert', 'jhsdb', 'unzipsfx', 'podselect5.28', 'treereg', 'csreq', 'whatis', 'gperf', 'php', 'iconutil', 'zipsplit', 'lwp-dump', 'pathopens.d', 'xattr-2.7', 'tail', 'whois', 'nsupdate', 'crc32', 'ldapdelete', 'grep', 'pstopdf', 'rwbytype.d', 'script', 'vtool', 'more', 'ldapwhoami', 'pl2pm', 'h2ph5.18', 'ncinit', 'tkmib', 'cal', 'afplay', '2to3-', 'addftinfo', 'time', 'svnlook', 'ssh-agent', 'gcore', 'pwhich', 'javap', 'xed', 'uuname', 'javaws', 'texindex', 'env', 'pr', 'head', 'python-config', 'scandeps5.28.pl', 'xsubpp5.18', 'dsymutil', 'clear', 'manpath', 'apropos', 'units', 'redo_prebinding', 'info', 'curl-config', 'kgetcred', 'rev', 'SplitForks', 'uniq', 'tclsh', 'dbicadmin5.28', 'productsign', 'mklocale', 'pod2text5.18', 'defaults', 'tic', 'zip', 'uulog', 'atrm', 'curl', 'wdutil', 'agentxtrap', 'db_verify', 'servertool', 'newgrp', 'timerfires', 'rpcgen', 'perlthanks', 'post-grohtml', 'moose-outdated5.18', 'snmpnetstat', 'lastcomm', 'getconf', 'kpasswd', 'vis', 'dbiproxy', 'instruments', 'hpftodit', 'ipcrm', 'pic', 'net-snmp-config', 'cpanp', 'otool', 'format-sql', 'h2ph5.28', 'killall', 'patch', 'gdiffmk', 'tailspin', 'su', 'ul', 'compression_tool', 'tkcon', 'xsubpp5.28', 'ssh', 'kdestroy', 'snmpgetnext', 'type', 'scandeps5.18.pl', 'cpan2dist', 'msgs', 'xsubpp', 'jhat', 'CpMac', 'tidy', 'tftp', 'easy_install-2.7', 'assetutil', 'AssetCacheLocatorUtil', 'orbd', 'dbicadmin5.18', 'ktrace', 'DeRez', 'textutil', 'xgettext.pl', 'automator', 'wsgen', 'stat', 'perldoc', 'javac', 'xcsdiagnose', 'mdfind', 'grodvi', 'mdls', 'codesign_allocate', 'lookbib', 'mddiagnose', 'snmpbulkwalk', 'keytool', 'fileproviderctl', 'binhex.pl', 'dtruss', 'dserr', 'tiff2icns', 'moose-outdated5.28', 'pbpaste', 'policytool', 'pod2text5.28', 'actool', 'heap', 'sum', 'lskq', 'dbilogstrip5.28', 'macbinary', 'debinhex5.28.pl', 'ncdestroy', 'nc', 'snmptrap', 'tsort', 'uuencode', 'cpp', 'swift', 'batch', 'sqlite3', 'make', 'dig', 'ptardiff5.18', 'macerror', 'infocmp', 'apt', 'trimforce', 'nm', 'flex++', 'osadecompile', 'IOAccelMemory', 'ssh-add', 'machine', 'wish8.5', 'screen', 'snmpget', 'pcsctest', 'codesign', 'format-sql5.28', 'atos', 'llvm-gcc', 'mailq', 'arch', 'ssh-keygen', 'snmptable', 'kill.d', 'pod2readme5.28', 'ditto', 'getopts', 'users', 'snmpbulkget', 'sdp', 'shasum5.28', 'showmount', 'taskinfo', 'ar', 'perldoc5.18', 'who', 'mktemp', 'unifdef', 'yaa', 'cut', 'imptrace', 'pack200', 'net-server5.28', 'ippeveprinter', 'hdid', 'dc', 'biff', 'perl5.28', 'mailx', 'odutil', 'jsadebugd', 'xargs', 'texi2dvi', 'debinhex5.18.pl', 'priclass.d', 'pod2latex5.18', 'ptardiff5.28', 'topsysproc', 'nl', 'dbilogstrip5.18', 'view', 'jjs', 'spfquery', 'sample', 'bg', 'lipo', 'seeksize.d', 'eyapp', 'clang++', 'setuids.d', 'shlock', 'symbols', 'afmtodit', 'gzexe', 'mkdep', 'a2p5.18', 'genstrings', 'at', 'what', 'sdx', 'm4', 'asa', 'iptab', 'format-sql5.18', 'swiftc', 'nfsstat', 'svnversion', 'uupick', 'ipcs', 'pod2readme5.18', 'pluginkit', 'as', 'MvMac', 'net-server5.18', 'fold', 'gnumake', 'perl5.18', 'log', 'tmutil', 'checknr', 'certtool', 'python2.7', 'vmmap', 'shasum5.18', 'h2xs', 'csrutil', 'shar', 'perldoc5.28', 'ldappasswd', 'lkbib', 'ResMerger', 'bitesize.d', 'db_checkpoint', 'funzip', 'power_report.sh', 'iosnoop', 'atsutil', 'osalang', 'dirname', 'pod2man', 'enc2xs', 'treereg5.28', 'moo-outdated', 'xgettext5.28.pl', 'iopending', 'infokey', 'ncal', 'cpan5.28', 'chflags', 'find2perl5.18', 'fg', 'rwbypid.d', 'jmap', 'dscl', 'leaks', 'splain5.18', 'nbdst', 'mnthome', 'jshell', 'dsexport', 'mdimport', 'id', 'procsystime', 'cd', 'quota', 'uuto', 'fuser', 'dsimport', 'csgather', 'json_pp5.28', 'git-shell', 'ldapsearch', 'command', 'snmp-bridge-mib', 'egrep', 'notifyutil', 'cc', 'dsmemberutil', 'podselect', 'pod2html5.28', 'grn', 'psed', 'whereis', 'tccutil', 'a2p', 'find', 'jstat', 'zcat', 'ip2cc5.18', 'unifdefall', 'nroff', 'pridist.d', 'size', 'timesyncanalyse', 'libnetcfg5.28', 'uustat', 'snmpwalk', 'llvm-g++', 'scp', 'instmodsh5.18', 'tnameserv', 'true', 'afinfo', 'hidutil', 'ldapadd', 'pwpolicy', 'profiles', 'yacc', 'kswitch', 'xcodebuild', 'jobs', 'c89', 'sudo', 'bioutil', 'splain5.28', 'tmdiagnose', 'plockstat', 'xgettext5.18.pl', 'serialver', 'afida', 'pgrep', 'yes', 'lessecho', 'sdiff', 'afscexpand', 'treereg5.18', 'cpan5.18', 'db_deadlock', 'ldapcompare', 'unexpand', 'git-upload-pack', 'ssh-copy-id', 'grolj4', 'fixproc', 'debinhex.pl', 'lorder', 'pod2html5.18', 'ranlib', 'javadoc', 'tput', 'fgrep', 'json_pp5.18', 'sigdist.d', 'ppdhtml', 'libnetcfg5.18', 'auval', 'erb', 'dappprof', 'openssl', 'instmodsh5.28', 'drutil', 'jinfo', 'ip2cc5.28', 'splain', 'pmset', 'xmlcatalog', 'zcmp', 'ptargrep5.28', 'lwp-mirror5.28', 'rwsnoop', 'jstatd', 'htmltree5.28', 'lpr', 'layerutil', 'snmptest', 'mib2c-update', 'grog', 'creatbyproc.d', 'pstruct', 'fdesetup', 'flex', 'hostinfo', 'jcontrol', 'MergePef', 'lpstat', 'SetFile', 'pl2pm5.28', 'pod2html', 'rebase', 'tar', 'rdoc', 'uptime', 's2p', 'pidpersec.d', 'xpath5.18', 'schemagen', 'moo-outdated5.28', 'pod2usage5.28', 'dbiprof5.28', 'cvcp', 'package-stash-conflicts5.28', 'false', 'zegrep', 'memory_pressure', 'uncompress', 'lwp-request', 'ncurses5.4-config', 'findrule5.28', 'sampleproc', 'db_recover', 'ptar5.28', 'h2xs5.28', 'nmedit', 'filebyproc.d', 'bison', 'tclsh8.5', 'jdeps', 'productbuild', 'zipinfo', 'diffstat', 'login', 'db_dump', 'smtpd.py', 'cpuctl', 'cpu_profiler.d', 'which', 'bundler', 'iopattern', 'finger', 'mig', 'sntp', 'klist', 'open', 'GetFileInfo', 'localedef', 'ruby', 'stringdups', 'htmltree', 'ptargrep5.18', 'git', 'tr', 'lwp-mirror5.18', 'htmltree5.18', 'banner', 'leave', 'jconsole', 'paste', 'RezWack', 'moo-outdated5.18', 'bzip2', 'pod2usage5.18', 'uucp', 'passwd', 'dbiprof5.18', 'package-stash-conflicts5.18', 'uuidgen', 'pl2pm5.18', 'install_name_tool', 'cmpdylib', 'makeinfo', 'php-config', 'zfgrep', 'xpath5.28', 'snfsdefrag', 'zipdetails', 'look', 'findrule5.18', 'col', 'dscacheutil', 'ptar5.18', 'zforce', 'lwp-mirror', 'malloc_history', 'cpio', 'nohup', 'kcc', 'ulimit', 'rails', 'bspatch', 'RezDet', 'hotspot.d', 'cvaffinity', 'gatherheaderdoc', 'ppdi', 'pcap-config', 'avmetareadwrite', 'update_dyld_shared_cache_root_mode', 'gen_bridge_metadata', 'gem', 'opendiff', 'h2xs5.18', 'talk', 'expect', 'jimage', 'lockstat', 'dapptrace', 'install-info', 'xattr', 'w', 'gunzip'] ['cat', 'echo', 'launchctl', 'df', 'pwd', 'test', 'csh', 'wait4path', 'unlink', 'sleep', 'stty', 'date', 'ed', 'expr', 'pax', 'bash', 'kill', 'sh', 'ps', 'link', 'tcsh', 'dd', 'mkdir', 'ksh', 'hostname', 'dash', 'rmdir', 'mv', 'ln', 'ls', 'cp', 'sync', 'zsh', 'chmod', 'rm', '['] ['dsconfigad', 'htdbm', 'netbiosd', 'postlock', 'systemsoundserverd', 'dseditgroup', 'avbdeviced', 'rpcinfo', 'BootCacheControl', 'weakpass_edit', 'periodic', 'accton', 'wfsctl', 'postalias', 'slapacl', 'edquota', 'sndiskmove', 'pdisk', 'amt', 'lpadmin', 'fdisk', 'sysadminctl', 'networksetup', 'envvars', 'ktutil', 'setquota', 'otctl', 'sncfgvalidate', 'php-fpm', 'AppleFileServer', 'dnctl', 'mDNSResponder', 'repquota', 'cupsfilter', 'checkgid', 'uuconv', 'sharing', 'vifs', 'ac', 'racoon', 'dsenableroot', 'xsanctl', 'kdcsetup', 'aslmanager', 'screencapture', 'htdigest', 'rtsold', 'chat', 'DevToolsSecurity', 'logresolve', 'cvdbset', 'KernelEventAgent', 'gpt', 'scutil', 'ioreg', 'ab', 'traceroute6', 'pwd_mkdb', 'sysctl', 'appsleepd', 'sshd', 'mDNSResponderHelper', 'authserver', 'sncfginstall', 'postmulti', 'lsof', 'pkgutil', 'slapindex', 'sc_auth', 'ioclasscount', 'uucico', 'firmwarepasswd', 'rarpd', 'tsig-keygen', 'kadmin.local', 'syslogd', 'taskpolicy', 'filecoordinationd', 'dot_clean', 'PasswordService', 'systemsetup', 'zdump', 'snmpd', 'ndp', 'coreaudiod', 'rpcbind', 'praudit', 'usernoted', 'postkick', 'postcat', 'netstat', 'lpc', 'slapadd', 'krbservicesetup', 'sncfgtemplate', 'slapconfig', 'rtadvd', 'httxt2dbm', 'distnoted', 'mtree', 'cupsdisable', 'lpmove', 'disktool', 'purge', 'rpc.statd', 'cupsctl', 'DirectoryService', 'notifyd', 'klist_cdhashes', 'dtrace', 'kextcache', 'cupsd', 'dbmmanage', 'languagesetup', 'skywalkctl', 'mkpassdb', 'postconf', 'createhomedir', 'ocspd', 'iostat', 'cvdb', 'sa', 'rpc.lockd', 'uuxqt', 'mkfile', 'softwareupdate', 'unsetpassword', 'zic', 'nfs4mapid', 'postsuper', 'htpasswd', 'rotatelogs', 'universalaccessd', 'audit', 'httpd', 'bluetoothaudiod', 'slapauth', 'slappasswd', 'localemanager', 'asr', 'cvupdatefs', 'bless', 'cvgather', 'xscertadmin', 'visudo', 'uusched', 'dsconfigldap', 'smbdiagnose', 'cfprefsd', 'auditd', 'uuchk', 'cvfsck', 'kextfind', 'diskutil', 'cvfsid', 'sso_util', 'vsdbutil', 'ddns-confgen', 'ioalloccount', 'uasysdiagnose', 'dev_mkdb', 'hdik', 'slapdn', 'vpnd', 'postqueue', 'setkey', 'tpctl', 'repairHomePermissions', 'spindump', 'cupsreject', 'traceroute', 'quotaoff', 'newsyslog', 'postfix', 'cvfsdb', 'snmptrapd', 'chroot', 'arp', 'cupsaccept', 'nvram', 'chown', 'mkextunpack', 'sncfgremove', 'sncfgquery', 'postlog', 'installer', 'pppd', 'httpd-wrapper', 'system_profiler', 'fcgistarter', 'bluetoothd', 'slapschema', 'kadmin', 'spray', 'cvversions', 'kextlibs', 'tcpdump', 'xartutil', 'securityd', 'nlcontrol', 'quotaon', 'spctl', 'vipw', 'gssd', 'slaptest', 'automount', 'scselect', 'envvars-std', 'graphicssession', 'ckksctl', 'lpinfo', 'smbd', 'serverinfo', 'cvmkfs', 'postmap', 'postdrop', 'cupsenable', 'cron', 'systemstats', 'bnepd', 'kextstat', 'cvlabel', 'sendmail', 'systemkeychain', 'kcditto', 'slapcat', 'ipconfig', 'auditreduce', 'cvadmin', 'WirelessRadioManagerd', 'apachectl', 'htcacheclean'] ['mount_hfs', 'mount_apfs', 'md5', 'fsck', 'mount_udf', 'quotacheck', 'mount_cd9660', 'ping', 'fsck_exfat', 'mount_exfat', 'fsck_udf', 'shutdown', 'route', 'mount_webdav', 'fsck_hfs', 'nfsd', 'reboot', 'nfsiod', 'fsck_cs', 'fsck_apfs', 'fstyp_msdos', 'disklabel', 'mount_msdos', 'fsck_msdos', 'ifconfig', 'halt', 'mount_9p', 'mount_ntfs', 'rtsol', 'newfs_apfs', 'umount', 'fstyp', 'kextunload', 'mpioutil', 'fstyp_ntfs', 'emond', 'mount_nfs', 'newfs_udf', 'mount_ftp', 'pfctl', 'mknod', 'fstyp_udf', 'dmesg', 'mount', 'fibreconfig', 'fstyp_hfs', 'newfs_hfs', 'dynamic_pager', 'launchd', 'newfs_exfat', 'apfs_hfs_convert', 'nologin', 'mount_afp', 'mount_smbfs', 'ping6', 'kextload', 'mount_cddafs', 'mount_fdesc', 'newfs_msdos', 'mount_acfs', 'mount_devfs'] ['luajittex', 'lollipop', 't1disasm', 'chktex', 'rubikrotation', 'lily-rebuild-pdfs', 'weave', 'mag', 'man', 'ebb', 'prepmx', 'mktexlsr', 'gsftopk', 'upmendex', 'dvibook', 'kpsewhere', 'rumakeindex', 'fontinst', 'cef5conv', 'lacheck', 'httexi', 'lily-image-commands', 'texloganalyser', 'dvilj', 'patgen', 'uptex', 'exceltex', 'pdvitype', 'texconfig-sys', 'xmltex', 'vlna', 'texsis', 'dvipdft', 'urlbst', 'pdfcslatex', 'afm2afm', 'cefconv', 'uplatex-dev', 'sjisconv', 'tex2xindy', 'musixtex', 'pdfcsplain', 'opl2ofm', 'de-macro', 'bbl2bib', 'ltx2crossrefxml', 'pdftex', 'r-mpost', 'dvitodvi', 'gftodvi', 'dviconcat', 'texluajitc', 'dvipng', 'pdflatex-dev', 'komkindex', 'tex', 'sty2dtx', 'ppltotf', 'yplan', 'eplain', 'eptex', 'lily-glyph-commands', 'htmex', 'texlua', 'htxelatex', 'xasy', 'fmtutil-user', 'wovp2ovf', 'dvilualatex', 'cefsconv', 'context', 'platex', 'allec', 'adhocfilelist', 'kpsetool', 'makejvf', 'texdoctk', 'xelatex-dev', 'vptovf', 'tex4ht', 'texluajit', 'mtxrunjit', 'uplatex', 'musixflx', 'pfarrei', 'mf', 'latexdiff-vc', 'ttfdump', 'etex', 'fig4latex', 'bibexport', 'ttf2tfm', 'latexmk', 'pmpost', 'ctwill', 'pst2pdf', 'wordcount', 'texconfig-dialog', 'luahbtex', 'lwarpmk', 'dvilj2p', 'dviinfox', 'ttf2kotexfont', 'ctanbib', 'cweave', 'bg5+latex', 'pdfatfi', 'ptex2pdf', 'e2pall', 'kpsewhich', 'upbibtex', 'texdiff', 'mathspic', 'kanji-fontmap-creator', 'kanji-config-updmap', 'asy', 'typeoutfileinfo', 'chklref', 'upmpost', 'pdflatex', 'perltex', 'mkt1font', 'cefslatex', 'cjk-gs-integrate', 'chkdvifont', 'dvitype', 'pdfjadetex', 't1lint', 'jamo-normalize', 'fmtutil-sys', 'wofm2opl', 'dviasm', 'kpsestat', 'pdfxup', 'makedtx', 'pltotf', 'mkindex', 'dvilj6', 'r-pmpost', 'xindy.mem', 'xetex', 'latex', 'ps4pdf', 'multibibliography', 'teckit_compile', 'ttf2afm', 'biburl2doi', 'getmapdl', 'uptftopl', 'contextjit', 'bib2gls', 'texplate', 'match_parens', 'mkjobtexmf', 'updvitomp', 'ps2eps', 'pkfix-helper', 'chkweb', 'arlatex', 'pn2pdf', 'pdfclose', 'xindex', 'clxelatex', 'dosepsbin', 'jadetex', 'a2ping', 'bibzbladd', 'ovf2ovp', 'mfluajit-nowin', 'mpost', 'texosquery-jre5', 'texhash', 'convbkmk', 'thumbpdf', 'pkfix', 'dvihp', 'hbf2gf', 'xindy.run', 'texcount', 'texmfstart', 'latexrevise', 'cefpdflatex', 'texluac', 'dvicopy', 'ctie', 'pdftex-quiet', 'euptex', 'pdftosrc', 'mf-nowin', 'ctangle', 'omfonts', 't1asm', 'mflua-nowin', 'cluttex', 'svn-multi', 'mk4ht', 'afm2tfm', 'pdfopen', 'fragmaster', 'ebong', 'ctanify', 'pygmentex', 'texdef', 'luatex', 'cslatex', 'synctex', 'texdirflatten', 'gbkpdflatex', 'xdvipdfmx', 'sjispdflatex', 'makeindex', 'dviluatex', 'mkofm', 'dvipdfmx', 'psbook', 'dvispc', 'csplain', 'ttftotype42', 'mft', 't1rawafm', 'fmtutil', 'ctwill-twinx', 'simpdftex', 'depythontex', 'otfinfo', 'latexindent', 'kanji-config-updmap-sys', 'extconv', 'disdvi', 'pdvitomp', 'dvipdfm', 'texliveonfly', 'allneeded', 'htcontext', 't1testpage', 'biber', 'dv2dt', 'xindy', 'pdfbook2', 't1unmac', 'xelatex', 'webquiz', 'kpsepath', 'diadia', 'makeglossaries', 'cef5pdflatex', 'autoinst', 'dvilualatex-dev', 'mkpic', 'splitindex', 'repstopdf', 'otangle', 'mfplain', 'latexfileversion', 'latex-git-log', 'inimf', 'lualatex-dev', 'latex2man', 'ps2pk', 'htxetex', 'l3build', 'ptftopl', 'ptex', 'gbklatex', 't1binary', 'bibtex', 't1dotlessj', 'mktexpk', 'detex', 'htlatex', 'odvicopy', 'dvidvi', 'extractres', 'extractbb', 'tie', 'latexdef', 'tlmgr', 'arara', 'ctan-o-mat', 'rubibtex', 'dvigif', 'gftype', 'ketcindy', 'kpseaccess', 'luacsplain', 'cachepic', 'srcredact', 'dtxgen', 'mmafm', 'pktype', 'platex-dev', 'kpsexpand', 'pktogf', 'msxlint', 't1reencode', 'vftovp', 'xhlatex', 'ht', 'mendex', 'make4ht', 'ceflatex', 'texlinks', 'pmxchords', 'mptopdf', 'afm2pl', 'mktexmf', 'lamed', 'gftopk', 'ulqda', 'dvilj4l', 'pooltype', 'bg5latex', 'bibmradd', 'aleph', 'wovf2ovp', 'pdfetex', 'dvi2tty', 'ofm2opl', 'pslatex', 'initex', 'latexpand', 'pamphletangler', 'mkgrkindex', 'mtxrun', 'epsffit', 'listings-ext.sh', 'mktexfmt', 'scor2prt', 'psnup', 'ot2kpx', 'allcm', 'pk2bm', 'dvitomp', 'texindy', 'vpl2vpl', 'luatools', 'cef5latex', 'ctwill-refsort', 'luajithbtex', 'bg5+pdflatex', 'dvisvgm', 'tex2aspc', 'bg5conv', 'deweb', 'tlcockpit', 'cfftot1', 'dviselect', 'odvitype', 'vpl2ovp', 'otp2ocp', 'latexdiff', 'dt2dv', 'bg5pdflatex', 'mf2pt1', 'psresize', 't1mac', 'epspdf', 'pythontex', 'bibtexu', 'authorindex', 'texosquery', 'tlshell', 'pdfxmltex', 'includeres', 't1ascii', 'pdflatexpicscale', 'mfluajit', 'axohelp', 'tangle', 'httex', 'texosquery-jre8', 'checkcites', 'bibtex8', 'dvi2fax', 'otftotfm', 'cefspdflatex', 'mmpfb', 'pfb2pfa', 'vpe', 'psselect', 'latex-dev', 'findhyph', 'gregorio', 'ovp2ovf', 'utf8mex', 'mflua', 'purifyeps', 'autosp', 'bundledoc', 'mllatex', 'tex4ebook', 'xdvi-xaw', 'sjislatex', 'rungs', 'dvilj4', 'ltxfileinfo', 'texconfig', 'updvitype', 'ltximg', 'updmap-user', 'dvips', 'convertgls2bib', 'latex2nemeth', 'pdfjam', 'epstopdf', 'outocp', 'pedigree', 'mkocp', 'kpsereadlink', 'ttf2pk', 'tpic2pdftex', 'kanji-config-updmap-user', 'psjoin', 'm-tx', 'uppltotf', 'texdoc', 'bbox', 'dvired', 'latex-papersize', 'makeglossaries-lite', 't4ht', 'xdvi', 'ps2frag', 'wopl2ofm', 'devnag', 'ctanupload', 'texexec', 'listbib', 'cllualatex', 'lualatex', 'pmxab', 'jfmutil', 'pdfmex', 'tftopl', 'mltex', 'amstex', 'pbibtex', 'pstops', 'optex', 'mex', 'bibdoiadd', 'updmap', 'dvipos', 'luaotfload-tool', 'epspdftk', 'updmap-sys', 'r-upmpost', 'mktextfm', 'texfot', 'checklistings', 'rpdfcrop', 'a5toa4', 'installfont-tl', 'pdfcrop', 'pdfannotextractor'] ['xfs', 'xfsinfo', 'atobm', 'xdpyinfo', 'showrgb', 'xlsfonts', 'editres', 'fonttosfnt', 'xfontsel', 'xclock', 'xmore', 'xman', 'xmag', 'xrefresh', 'fc-list', 'xdmshell', 'xauth', 'twm', 'cxpm', 'mkfontdir', 'xclipboard', 'png-fix-itxt', 'ucs2any', 'xterm', 'bdftruncate', 'xsetroot', 'xmessage', 'xcursorgen', 'fc-pattern', 'xkbvleds', 'xkbbell', 'freetype-config', 'Xephyr', 'fc-validate', 'bitmap', 'libpng16-config', 'pngfix', 'fc-query', 'xkbprint', 'luit', 'xhost', 'gtf', 'listres', 'x11perf', 'Xorg', 'libpng-config', 'koi8rxterm', 'xpr', 'xstdcmap', 'xgc', 'mkfontscale', 'setxkbmap', 'xinit', 'Xquartz', 'xbacklight', 'xdm', 'xcmsdb', 'xdpr', 'xfindproxy', 'xrdb', 'xlsclients', 'xprop', 'xkeystone', 'xeyes', 'Xvfb', 'Xnest', 'xev', 'startx', 'xkbwatch', 'xscope', 'xfd', 'sessreg', 'xwud', 'lndir', 'xinput', 'xconsole', 'glxinfo', 'sxpm', 'xsetmode', 'Xfake', 'fslsfonts', 'xcompmgr', 'xrandr', 'bmtoa', 'xwd', 'xmodmap', 'glxgears', 'fc-cache', 'iceauth', 'cvt', 'xcutsel', 'bdftopcf', 'fc-cat', 'xsetpointer', 'xkbevd', 'quartz-wm', 'xsm', 'appres', 'xset', 'xlsatoms', 'fc-match', 'oclock', 'x11perfcomp', 'resize', 'showfont', 'xditview', 'xwininfo', 'xvinfo', 'xcalc', 'xgamma', 'makedepend', 'viewres', 'ico', 'X', 'gccmakedep', 'xedit', 'smproxy', 'xkill', 'xkbcomp', 'xload', 'font_cache', 'xmh', 'xlogo', 'fstobdf', 'uxterm', 'fc-scan'] Path provided by --with-executables-search-path ['win32fe.exe', 'win32feutils.dll'] Checking for program /Developer/NVIDIA/CUDA-6.5/bin/nvcc...not found Checking for program /Users/kongf/projects/moose6/petsc/lib/petsc/bin/win32fe/nvcc...not found Unable to find programs ['nvcc'] providing listing of each search directory to help debug Path provided in Python program Warning accessing /Developer/NVIDIA/CUDA-6.5/bin gives errors: [Errno 2] No such file or directory: '/Developer/NVIDIA/CUDA-6.5/bin' Path provided by --with-executables-search-path ['win32fe.exe', 'win32feutils.dll'] Checking for program /usr/local/cuda/bin/nvcc...not found Checking for program /Users/kongf/projects/moose6/petsc/lib/petsc/bin/win32fe/nvcc...not found Unable to find programs ['nvcc'] providing listing of each search directory to help debug Path provided in Python program Warning accessing /usr/local/cuda/bin gives errors: [Errno 2] No such file or directory: '/usr/local/cuda/bin' Path provided by --with-executables-search-path ['win32fe.exe', 'win32feutils.dll'] ================================================================================ TEST checkCUDAPreprocessor from config.setCompilers(/Users/kongf/projects/moose6/petsc/config/BuildSystem/config/setCompilers.py:775) TESTING: checkCUDAPreprocessor from config.setCompilers(config/BuildSystem/config/setCompilers.py:775) Locate a functional CUDA preprocessor ================================================================================ TEST checkHIPCompiler from config.setCompilers(/Users/kongf/projects/moose6/petsc/config/BuildSystem/config/setCompilers.py:809) TESTING: checkHIPCompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:809) Locate a functional HIP compiler Checking for program /Users/kongf/miniconda3/envs/testpetsc/bin/hipcc...not found Checking for program /Users/kongf/miniconda3/condabin/hipcc...not found Checking for program /usr/local/bin/hipcc...not found Checking for program /usr/bin/hipcc...not found Checking for program /bin/hipcc...not found Checking for program /usr/sbin/hipcc...not found Checking for program /sbin/hipcc...not found Checking for program /Library/TeX/texbin/hipcc...not found Checking for program /opt/X11/bin/hipcc...not found Checking for program /Users/kongf/projects/moose6/petsc/lib/petsc/bin/win32fe/hipcc...not found Unable to find programs ['hipcc'] providing listing of each search directory to help debug Path provided in Python program Path provided by default path ['x86_64-apple-darwin13.4.0-pagestuff', 'llvm-opt-report', 'llvm-lipo', 'modularize', 'llvm-cxxdump', 'mpif90', 'clang-change-namespace', 'verify-uselistorder', 'llvm-cvtres', 'x86_64-apple-darwin13.4.0-check_dylib', 'hydra_pmi_proxy', 'llvm-strings', 'clang-move', 'x86_64-apple-darwin13.4.0-ranlib', 'llvm-install-name-tool', 'clangd-xpc-test-client', 'clang', 'llvm-lto2', 'x86_64-apple-darwin13.4.0-nmedit', 'mpirun', 'llvm-cfi-verify', 'llvm-cov', 'x86_64-apple-darwin13.4.0-install_name_tool', 'llc', 'gfortran', 'llvm-link', 'llvm-symbolizer', 'llvm-objdump', 'x86_64-apple-darwin13.4.0-strings', 'clang-refactor', 'clang-rename', 'x86_64-apple-darwin13.4.0-mtoc', 'clangd', 'llvm-mca', 'set-xcode-analyzer', 'iconv', 'llvm-rc', '-clang++', 'mpiexec.hydra', 'clang-include-fixer', 'x86_64-apple-darwin13.4.0-libtool', 'x86_64-apple-darwin13.4.0-lipo', 'x86_64-apple-darwin13.4.0-vtool', 'llvm-addr2line', 'llvm-jitlink', 'x86_64-apple-darwin13.4.0-as', 'llvm-xray', 'x86_64-apple-darwin13.4.0-size', 'clang-format', 'llvm-rtdyld', 'x86_64-apple-darwin13.4.0-codesign_allocate', 'clang-check', 'llvm-lto', 'pp-trace', 'llvm-c-test', 'x86_64-apple-darwin13.4.0-seg_hack', 'x86_64-apple-darwin13.4.0-ar', 'c-index-test', 'llvm-dwp', 'x86_64-apple-darwin13.4.0-segedit', 'x86_64-apple-darwin13.4.0-redo_prebinding', 'x86_64-apple-darwin13.4.0-nm', 'x86_64-apple-darwin13.4.0-clang', 'llvm-reduce', 'llvm-elfabi', 'x86_64-apple-darwin13.4.0-checksyms', 'llvm-mc', 'mpivars', 'clang-reorder-fields', 'x86_64-apple-darwin13.4.0-strip', 'llvm-exegesis', 'x86_64-apple-darwin13.4.0-cmpdylib', 'llvm-readelf', 'llvm-as', 'clang-query', 'scan-build', 'llvm-nm', 'llvm-lib', 'llvm-undname', 'x86_64-apple-darwin13.4.0-unwinddump', 'mpif77', 'x86_64-apple-darwin13.4.0-ObjectDump', 'llvm-ml', 'clang-offload-bundler', 'x86_64-apple-darwin13.4.0-inout', 'llvm-ar', 'find-all-symbols', 'clang-cl', 'llvm-dis', 'x86_64-apple-darwin13.4.0-makerelocs', 'llvm-size', 'mpichversion', 'x86_64-apple-darwin13.4.0-clang++', 'mpicc', 'dsymutil', 'obj2yaml', 'x86_64-apple-darwin13.4.0-bitcode_strip', 'x86_64-apple-darwin13.4.0-machocheck', 'clang-tidy', 'llvm-dlltool', 'llvm-readobj', 'llvm-cxxfilt', 'bugpoint', 'llvm-pdbutil', 'clang-offload-wrapper', 'clang-doc', 'llvm-ifs', 'parkill', 'lli', 'llvm-tblgen', 'mpicxx', 'clang-scan-deps', 'x86_64-apple-darwin13.4.0-dyldinfo', 'x86_64-apple-darwin13.4.0-ctf_insert', 'clang++', 'x86_64-apple-darwin13.4.0-mtor', 'sancov', 'x86_64-apple-darwin13.4.0-gfortran', 'x86_64-apple-darwin13.4.0-ld', 'llvm-dwarfdump', 'opt', 'ldid', 'clang-cpp', 'clang-11', 'clang-extdef-mapping', 'llvm-cat', 'git-clang-format', 'llvm-profdata', 'clang-apply-replacements', 'llvm-objcopy', 'llvm-extract', 'yaml2obj', 'sanstats', 'x86_64-apple-darwin13.4.0-otool', 'llvm-split', 'llvm-bcanalyzer', 'hydra_persist', 'mpiexec', 'hmaptool', 'llvm-stress', 'llvm-diff', 'x86_64-apple-darwin13.4.0-seg_addr_table', 'scan-view', 'diagtool', 'mpic++', 'mpifort', 'llvm-modextract', 'hydra_nameserver', 'llvm-gsymutil', 'llvm-strip', 'llvm-mt', 'x86_64-apple-darwin13.4.0-indr', 'llvm-ranlib', 'llvm-cxxmap'] ['conda'] ['dvipdf', 'ps2ps', 'gs-noX11', 'gs', 'apm', 'atom', 'ps2pdfwr', 'ps2pdf12', 'gsdj', 'pdf2dsc', 'ps2pdf14', 'gsnd', 'ps2pdf13', 'gs-X11', 'pphs', 'gsdj500', 'ps2ascii', 'ps2pdf', 'pf2afm', 'pfbtopfa', 'gslp', 'printafm', 'ps2ps2', 'gslj', 'ps2epsi', 'gsbj', 'unix-lpr.sh', 'pdf2ps', 'eps2eps', 'lprsetup.sh'] ['uux', 'cpan', 'BuildStrings', 'loads.d', 'write', 'indent', 'bzip2recover', 'hdiutil', 'top', 'javah', 'pstruct5.18', 'tee', 'binhex5.18.pl', 'xip', 'wsimport', 'bzfgrep', 'qlmanage', 'snmptranslate', 'split', 'chsh', 'stty.pl', 'xml2man', 'iprofiler', 'man', 'lpoptions', 'tabs', 'smtpd2.7.py', 'rview', 'lsvfs', 'zgrep', 'dbiprof', 'zmore', 'corelist5.28', 'cpanp-run-perl', 'gcov', 'iptab5.28', 'svn', 'vim', 'idle2.7', 'macerror5.18', 'xjc', 'lwp-request5.18', 'bzmore', 'package-stash-conflicts', 'cancel', 'apply', 'bzgrep', 'umask', 'g++', 'libtool', 'pre-grohtml', 'colcrt', 'phpize', 'unalias', 'mp2bug', 'groff', 'mkfifo', 'toe', 'hexdump', 'spfd5.18', 'idle', 'crc325.18', 'Rez', 'cap_mkdb', 'ictool', 'cmp', 'syscallbypid.d', 'snmpset', 'locate', 'binhex5.28.pl', 'afconvert', 'afclip', 'bzegrep', 'neqn', 'instmodsh', 'extcheck', 'javapackager', 'pl', 'compress', 'corelist5.18', 'fddist', 'db_upgrade', 'diagnose-fu', 'ctags', 'iptab5.18', 'zdiff', 'macerror5.28', 'pathchk', 'mesg', 'setregion', 'perlivp', 'c++', 'pod2readme', 'vi', 'iofileb.d', 'errinfo', 'zipgrep', 'pod2usage', 'alias', 'wait', 'psed5.18', 'safaridriver', 'bzdiff', 'lwp-request5.28', 'unpack200', 'corelist', 'expand', 'strings', 'appletviewer', 'idlj', 'wall', 'spfd5.28', 'brctl', 'crc325.28', 'gm4', 'db_hotbackup', 'auvaltool', 'applesingle', 'clang', 'ibtool', 'tty', 'git-receive-pack', 'infotocap', 'pkill', 'pwhich5.18', 'cups-config', 'basename', 'nclist', 'objdump', 'install', 'native2ascii', 'c99', 'desdp', 'binhex', 'lsmp', 'xmllint', 'texi2pdf', 'last', 'vm_stat', 'syslog', 'spfquery5.18', 'net-snmp-cert', 'nslookup', 'prove5.18', 'vimdiff', 'topsyscall', 'cpan2dist5.18', '2to3-2.7', 'libnetcfg', 'c++filt', 'avbdiagnose', 'nice', 'perlivp5.18', 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'ldapmodrdn', 'systemextensionsctl', 'file', 'db_printlog', 'python', 'hash', 'bc', 'fontrestore', 'mg', 'python2', 'cpanp-run-perl5.18', 'sfltool', 'less', 'pod2latex', 'bunzip2', 'pythonw', 'touch', 'asctl', 'rmic', 'dispqlen.d', 'db_archive', 'refer', 'getopt', 'krb5-config', 'security', 'lwp-download5.28', 'hiutil', 'csdiagnose', 'pip3', 'enc2xs5.18', 'lastwords', 'rmid', 'stty5.28.pl', 'podchecker5.18', 'sed', 'ld', 'awk', 'ip2cc', 'syscallbyproc.d', 'snmpstatus', 'uudecode', 'UnRezWack', 'fmt', 'perlthanks5.18', 'zipdetails5.28', 'zless', 'xslt-config', 'sdef', 'pod2man5.18', 'ncctl', 'jmc', 'encguess5.28', 'pod2text', 'c2ph5.18', 'bashbug', 'mail', 'chpass', 'sips', 'xcrun', 'bzcmp', 'lldb', 'python2.7-config', 'piconv5.28', 'chfn', 'ipcount', 'newaliases', 'nano', 'eyapp5.18', 'pfbtops', 'lam', 'ipptool', 'irb', 'ipcount5.28', 'ptardiff', 'bzless', 'perlbug5.28', 'sysdiagnose', 'logname', 'tset', 'chgrp', 'cu', 'grops', 'printenv', 'unvis', 'grotty', 'atq', 'seq', 'fc', 'AssetCacheManagerUtil', 'colldef', 'jdb', 'wish', 'uname', 'hpmdiagnose', 'timer_analyser.d', 'jstack', 'unzip', 'stty5.18.pl', 'db_stat', 'rmiregistry', 'json_pp', 'zprint', 'kinit', 'mib2c', 'podchecker5.28', 'od', 'bsdtar', 'perl', 'findrule', 'tbtdiagnose', 'mcxquery', 'lwp-download', 'ppdpo', 'crontab', 'reset', 'kextutil', 'bzcat', 'dbicadmin', 'ex', 'perlthanks5.28', 'perlbug', 'zipdetails5.18', 'jvisualvm', 'footprint', 'pod2man5.28', 'config_data5.18', 'json_xs5.28', 'lsappinfo', 'eqn', 'db_load', 'fwkdp', 'piconv', 'read', 'ipcount5.18', 'perlbug5.18', 'snmpusm', 'piconv5.18', 'execsnoop', 'pagesize', 'lp', 'base64', 'ptargrep', 'eyapp5.28', 'jar', 'h2ph', 'readlink', 'opensnoop', 'rake', 'rvim', 'jcmd', 'dmc', 'vimtutor', 'phar', 'from', 'prove', 'newproc.d', 'gencat', 'darwinup', 'mdutil', 'znew', 'podchecker', 'mcxrefresh', 'colrm', 'dbilogstrip', 'pagestuff', 'crlrefresh', 'headerdoc2html', 'lwp-dump5.18', 'tbl', 'jrunscript', 'find2perl', 'filtercalltree', 'afhash', 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'ldapwhoami', 'pl2pm', 'h2ph5.18', 'ncinit', 'tkmib', 'cal', 'afplay', '2to3-', 'addftinfo', 'time', 'svnlook', 'ssh-agent', 'gcore', 'pwhich', 'javap', 'xed', 'uuname', 'javaws', 'texindex', 'env', 'pr', 'head', 'python-config', 'scandeps5.28.pl', 'xsubpp5.18', 'dsymutil', 'clear', 'manpath', 'apropos', 'units', 'redo_prebinding', 'info', 'curl-config', 'kgetcred', 'rev', 'SplitForks', 'uniq', 'tclsh', 'dbicadmin5.28', 'productsign', 'mklocale', 'pod2text5.18', 'defaults', 'tic', 'zip', 'uulog', 'atrm', 'curl', 'wdutil', 'agentxtrap', 'db_verify', 'servertool', 'newgrp', 'timerfires', 'rpcgen', 'perlthanks', 'post-grohtml', 'moose-outdated5.18', 'snmpnetstat', 'lastcomm', 'getconf', 'kpasswd', 'vis', 'dbiproxy', 'instruments', 'hpftodit', 'ipcrm', 'pic', 'net-snmp-config', 'cpanp', 'otool', 'format-sql', 'h2ph5.28', 'killall', 'patch', 'gdiffmk', 'tailspin', 'su', 'ul', 'compression_tool', 'tkcon', 'xsubpp5.28', 'ssh', 'kdestroy', 'snmpgetnext', 'type', 'scandeps5.18.pl', 'cpan2dist', 'msgs', 'xsubpp', 'jhat', 'CpMac', 'tidy', 'tftp', 'easy_install-2.7', 'assetutil', 'AssetCacheLocatorUtil', 'orbd', 'dbicadmin5.18', 'ktrace', 'DeRez', 'textutil', 'xgettext.pl', 'automator', 'wsgen', 'stat', 'perldoc', 'javac', 'xcsdiagnose', 'mdfind', 'grodvi', 'mdls', 'codesign_allocate', 'lookbib', 'mddiagnose', 'snmpbulkwalk', 'keytool', 'fileproviderctl', 'binhex.pl', 'dtruss', 'dserr', 'tiff2icns', 'moose-outdated5.28', 'pbpaste', 'policytool', 'pod2text5.28', 'actool', 'heap', 'sum', 'lskq', 'dbilogstrip5.28', 'macbinary', 'debinhex5.28.pl', 'ncdestroy', 'nc', 'snmptrap', 'tsort', 'uuencode', 'cpp', 'swift', 'batch', 'sqlite3', 'make', 'dig', 'ptardiff5.18', 'macerror', 'infocmp', 'apt', 'trimforce', 'nm', 'flex++', 'osadecompile', 'IOAccelMemory', 'ssh-add', 'machine', 'wish8.5', 'screen', 'snmpget', 'pcsctest', 'codesign', 'format-sql5.28', 'atos', 'llvm-gcc', 'mailq', 'arch', 'ssh-keygen', 'snmptable', 'kill.d', 'pod2readme5.28', 'ditto', 'getopts', 'users', 'snmpbulkget', 'sdp', 'shasum5.28', 'showmount', 'taskinfo', 'ar', 'perldoc5.18', 'who', 'mktemp', 'unifdef', 'yaa', 'cut', 'imptrace', 'pack200', 'net-server5.28', 'ippeveprinter', 'hdid', 'dc', 'biff', 'perl5.28', 'mailx', 'odutil', 'jsadebugd', 'xargs', 'texi2dvi', 'debinhex5.18.pl', 'priclass.d', 'pod2latex5.18', 'ptardiff5.28', 'topsysproc', 'nl', 'dbilogstrip5.18', 'view', 'jjs', 'spfquery', 'sample', 'bg', 'lipo', 'seeksize.d', 'eyapp', 'clang++', 'setuids.d', 'shlock', 'symbols', 'afmtodit', 'gzexe', 'mkdep', 'a2p5.18', 'genstrings', 'at', 'what', 'sdx', 'm4', 'asa', 'iptab', 'format-sql5.18', 'swiftc', 'nfsstat', 'svnversion', 'uupick', 'ipcs', 'pod2readme5.18', 'pluginkit', 'as', 'MvMac', 'net-server5.18', 'fold', 'gnumake', 'perl5.18', 'log', 'tmutil', 'checknr', 'certtool', 'python2.7', 'vmmap', 'shasum5.18', 'h2xs', 'csrutil', 'shar', 'perldoc5.28', 'ldappasswd', 'lkbib', 'ResMerger', 'bitesize.d', 'db_checkpoint', 'funzip', 'power_report.sh', 'iosnoop', 'atsutil', 'osalang', 'dirname', 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'cpan5.18', 'db_deadlock', 'ldapcompare', 'unexpand', 'git-upload-pack', 'ssh-copy-id', 'grolj4', 'fixproc', 'debinhex.pl', 'lorder', 'pod2html5.18', 'ranlib', 'javadoc', 'tput', 'fgrep', 'json_pp5.18', 'sigdist.d', 'ppdhtml', 'libnetcfg5.18', 'auval', 'erb', 'dappprof', 'openssl', 'instmodsh5.28', 'drutil', 'jinfo', 'ip2cc5.28', 'splain', 'pmset', 'xmlcatalog', 'zcmp', 'ptargrep5.28', 'lwp-mirror5.28', 'rwsnoop', 'jstatd', 'htmltree5.28', 'lpr', 'layerutil', 'snmptest', 'mib2c-update', 'grog', 'creatbyproc.d', 'pstruct', 'fdesetup', 'flex', 'hostinfo', 'jcontrol', 'MergePef', 'lpstat', 'SetFile', 'pl2pm5.28', 'pod2html', 'rebase', 'tar', 'rdoc', 'uptime', 's2p', 'pidpersec.d', 'xpath5.18', 'schemagen', 'moo-outdated5.28', 'pod2usage5.28', 'dbiprof5.28', 'cvcp', 'package-stash-conflicts5.28', 'false', 'zegrep', 'memory_pressure', 'uncompress', 'lwp-request', 'ncurses5.4-config', 'findrule5.28', 'sampleproc', 'db_recover', 'ptar5.28', 'h2xs5.28', 'nmedit', 'filebyproc.d', 'bison', 'tclsh8.5', 'jdeps', 'productbuild', 'zipinfo', 'diffstat', 'login', 'db_dump', 'smtpd.py', 'cpuctl', 'cpu_profiler.d', 'which', 'bundler', 'iopattern', 'finger', 'mig', 'sntp', 'klist', 'open', 'GetFileInfo', 'localedef', 'ruby', 'stringdups', 'htmltree', 'ptargrep5.18', 'git', 'tr', 'lwp-mirror5.18', 'htmltree5.18', 'banner', 'leave', 'jconsole', 'paste', 'RezWack', 'moo-outdated5.18', 'bzip2', 'pod2usage5.18', 'uucp', 'passwd', 'dbiprof5.18', 'package-stash-conflicts5.18', 'uuidgen', 'pl2pm5.18', 'install_name_tool', 'cmpdylib', 'makeinfo', 'php-config', 'zfgrep', 'xpath5.28', 'snfsdefrag', 'zipdetails', 'look', 'findrule5.18', 'col', 'dscacheutil', 'ptar5.18', 'zforce', 'lwp-mirror', 'malloc_history', 'cpio', 'nohup', 'kcc', 'ulimit', 'rails', 'bspatch', 'RezDet', 'hotspot.d', 'cvaffinity', 'gatherheaderdoc', 'ppdi', 'pcap-config', 'avmetareadwrite', 'update_dyld_shared_cache_root_mode', 'gen_bridge_metadata', 'gem', 'opendiff', 'h2xs5.18', 'talk', 'expect', 'jimage', 'lockstat', 'dapptrace', 'install-info', 'xattr', 'w', 'gunzip'] ['cat', 'echo', 'launchctl', 'df', 'pwd', 'test', 'csh', 'wait4path', 'unlink', 'sleep', 'stty', 'date', 'ed', 'expr', 'pax', 'bash', 'kill', 'sh', 'ps', 'link', 'tcsh', 'dd', 'mkdir', 'ksh', 'hostname', 'dash', 'rmdir', 'mv', 'ln', 'ls', 'cp', 'sync', 'zsh', 'chmod', 'rm', '['] ['dsconfigad', 'htdbm', 'netbiosd', 'postlock', 'systemsoundserverd', 'dseditgroup', 'avbdeviced', 'rpcinfo', 'BootCacheControl', 'weakpass_edit', 'periodic', 'accton', 'wfsctl', 'postalias', 'slapacl', 'edquota', 'sndiskmove', 'pdisk', 'amt', 'lpadmin', 'fdisk', 'sysadminctl', 'networksetup', 'envvars', 'ktutil', 'setquota', 'otctl', 'sncfgvalidate', 'php-fpm', 'AppleFileServer', 'dnctl', 'mDNSResponder', 'repquota', 'cupsfilter', 'checkgid', 'uuconv', 'sharing', 'vifs', 'ac', 'racoon', 'dsenableroot', 'xsanctl', 'kdcsetup', 'aslmanager', 'screencapture', 'htdigest', 'rtsold', 'chat', 'DevToolsSecurity', 'logresolve', 'cvdbset', 'KernelEventAgent', 'gpt', 'scutil', 'ioreg', 'ab', 'traceroute6', 'pwd_mkdb', 'sysctl', 'appsleepd', 'sshd', 'mDNSResponderHelper', 'authserver', 'sncfginstall', 'postmulti', 'lsof', 'pkgutil', 'slapindex', 'sc_auth', 'ioclasscount', 'uucico', 'firmwarepasswd', 'rarpd', 'tsig-keygen', 'kadmin.local', 'syslogd', 'taskpolicy', 'filecoordinationd', 'dot_clean', 'PasswordService', 'systemsetup', 'zdump', 'snmpd', 'ndp', 'coreaudiod', 'rpcbind', 'praudit', 'usernoted', 'postkick', 'postcat', 'netstat', 'lpc', 'slapadd', 'krbservicesetup', 'sncfgtemplate', 'slapconfig', 'rtadvd', 'httxt2dbm', 'distnoted', 'mtree', 'cupsdisable', 'lpmove', 'disktool', 'purge', 'rpc.statd', 'cupsctl', 'DirectoryService', 'notifyd', 'klist_cdhashes', 'dtrace', 'kextcache', 'cupsd', 'dbmmanage', 'languagesetup', 'skywalkctl', 'mkpassdb', 'postconf', 'createhomedir', 'ocspd', 'iostat', 'cvdb', 'sa', 'rpc.lockd', 'uuxqt', 'mkfile', 'softwareupdate', 'unsetpassword', 'zic', 'nfs4mapid', 'postsuper', 'htpasswd', 'rotatelogs', 'universalaccessd', 'audit', 'httpd', 'bluetoothaudiod', 'slapauth', 'slappasswd', 'localemanager', 'asr', 'cvupdatefs', 'bless', 'cvgather', 'xscertadmin', 'visudo', 'uusched', 'dsconfigldap', 'smbdiagnose', 'cfprefsd', 'auditd', 'uuchk', 'cvfsck', 'kextfind', 'diskutil', 'cvfsid', 'sso_util', 'vsdbutil', 'ddns-confgen', 'ioalloccount', 'uasysdiagnose', 'dev_mkdb', 'hdik', 'slapdn', 'vpnd', 'postqueue', 'setkey', 'tpctl', 'repairHomePermissions', 'spindump', 'cupsreject', 'traceroute', 'quotaoff', 'newsyslog', 'postfix', 'cvfsdb', 'snmptrapd', 'chroot', 'arp', 'cupsaccept', 'nvram', 'chown', 'mkextunpack', 'sncfgremove', 'sncfgquery', 'postlog', 'installer', 'pppd', 'httpd-wrapper', 'system_profiler', 'fcgistarter', 'bluetoothd', 'slapschema', 'kadmin', 'spray', 'cvversions', 'kextlibs', 'tcpdump', 'xartutil', 'securityd', 'nlcontrol', 'quotaon', 'spctl', 'vipw', 'gssd', 'slaptest', 'automount', 'scselect', 'envvars-std', 'graphicssession', 'ckksctl', 'lpinfo', 'smbd', 'serverinfo', 'cvmkfs', 'postmap', 'postdrop', 'cupsenable', 'cron', 'systemstats', 'bnepd', 'kextstat', 'cvlabel', 'sendmail', 'systemkeychain', 'kcditto', 'slapcat', 'ipconfig', 'auditreduce', 'cvadmin', 'WirelessRadioManagerd', 'apachectl', 'htcacheclean'] ['mount_hfs', 'mount_apfs', 'md5', 'fsck', 'mount_udf', 'quotacheck', 'mount_cd9660', 'ping', 'fsck_exfat', 'mount_exfat', 'fsck_udf', 'shutdown', 'route', 'mount_webdav', 'fsck_hfs', 'nfsd', 'reboot', 'nfsiod', 'fsck_cs', 'fsck_apfs', 'fstyp_msdos', 'disklabel', 'mount_msdos', 'fsck_msdos', 'ifconfig', 'halt', 'mount_9p', 'mount_ntfs', 'rtsol', 'newfs_apfs', 'umount', 'fstyp', 'kextunload', 'mpioutil', 'fstyp_ntfs', 'emond', 'mount_nfs', 'newfs_udf', 'mount_ftp', 'pfctl', 'mknod', 'fstyp_udf', 'dmesg', 'mount', 'fibreconfig', 'fstyp_hfs', 'newfs_hfs', 'dynamic_pager', 'launchd', 'newfs_exfat', 'apfs_hfs_convert', 'nologin', 'mount_afp', 'mount_smbfs', 'ping6', 'kextload', 'mount_cddafs', 'mount_fdesc', 'newfs_msdos', 'mount_acfs', 'mount_devfs'] ['luajittex', 'lollipop', 't1disasm', 'chktex', 'rubikrotation', 'lily-rebuild-pdfs', 'weave', 'mag', 'man', 'ebb', 'prepmx', 'mktexlsr', 'gsftopk', 'upmendex', 'dvibook', 'kpsewhere', 'rumakeindex', 'fontinst', 'cef5conv', 'lacheck', 'httexi', 'lily-image-commands', 'texloganalyser', 'dvilj', 'patgen', 'uptex', 'exceltex', 'pdvitype', 'texconfig-sys', 'xmltex', 'vlna', 'texsis', 'dvipdft', 'urlbst', 'pdfcslatex', 'afm2afm', 'cefconv', 'uplatex-dev', 'sjisconv', 'tex2xindy', 'musixtex', 'pdfcsplain', 'opl2ofm', 'de-macro', 'bbl2bib', 'ltx2crossrefxml', 'pdftex', 'r-mpost', 'dvitodvi', 'gftodvi', 'dviconcat', 'texluajitc', 'dvipng', 'pdflatex-dev', 'komkindex', 'tex', 'sty2dtx', 'ppltotf', 'yplan', 'eplain', 'eptex', 'lily-glyph-commands', 'htmex', 'texlua', 'htxelatex', 'xasy', 'fmtutil-user', 'wovp2ovf', 'dvilualatex', 'cefsconv', 'context', 'platex', 'allec', 'adhocfilelist', 'kpsetool', 'makejvf', 'texdoctk', 'xelatex-dev', 'vptovf', 'tex4ht', 'texluajit', 'mtxrunjit', 'uplatex', 'musixflx', 'pfarrei', 'mf', 'latexdiff-vc', 'ttfdump', 'etex', 'fig4latex', 'bibexport', 'ttf2tfm', 'latexmk', 'pmpost', 'ctwill', 'pst2pdf', 'wordcount', 'texconfig-dialog', 'luahbtex', 'lwarpmk', 'dvilj2p', 'dviinfox', 'ttf2kotexfont', 'ctanbib', 'cweave', 'bg5+latex', 'pdfatfi', 'ptex2pdf', 'e2pall', 'kpsewhich', 'upbibtex', 'texdiff', 'mathspic', 'kanji-fontmap-creator', 'kanji-config-updmap', 'asy', 'typeoutfileinfo', 'chklref', 'upmpost', 'pdflatex', 'perltex', 'mkt1font', 'cefslatex', 'cjk-gs-integrate', 'chkdvifont', 'dvitype', 'pdfjadetex', 't1lint', 'jamo-normalize', 'fmtutil-sys', 'wofm2opl', 'dviasm', 'kpsestat', 'pdfxup', 'makedtx', 'pltotf', 'mkindex', 'dvilj6', 'r-pmpost', 'xindy.mem', 'xetex', 'latex', 'ps4pdf', 'multibibliography', 'teckit_compile', 'ttf2afm', 'biburl2doi', 'getmapdl', 'uptftopl', 'contextjit', 'bib2gls', 'texplate', 'match_parens', 'mkjobtexmf', 'updvitomp', 'ps2eps', 'pkfix-helper', 'chkweb', 'arlatex', 'pn2pdf', 'pdfclose', 'xindex', 'clxelatex', 'dosepsbin', 'jadetex', 'a2ping', 'bibzbladd', 'ovf2ovp', 'mfluajit-nowin', 'mpost', 'texosquery-jre5', 'texhash', 'convbkmk', 'thumbpdf', 'pkfix', 'dvihp', 'hbf2gf', 'xindy.run', 'texcount', 'texmfstart', 'latexrevise', 'cefpdflatex', 'texluac', 'dvicopy', 'ctie', 'pdftex-quiet', 'euptex', 'pdftosrc', 'mf-nowin', 'ctangle', 'omfonts', 't1asm', 'mflua-nowin', 'cluttex', 'svn-multi', 'mk4ht', 'afm2tfm', 'pdfopen', 'fragmaster', 'ebong', 'ctanify', 'pygmentex', 'texdef', 'luatex', 'cslatex', 'synctex', 'texdirflatten', 'gbkpdflatex', 'xdvipdfmx', 'sjispdflatex', 'makeindex', 'dviluatex', 'mkofm', 'dvipdfmx', 'psbook', 'dvispc', 'csplain', 'ttftotype42', 'mft', 't1rawafm', 'fmtutil', 'ctwill-twinx', 'simpdftex', 'depythontex', 'otfinfo', 'latexindent', 'kanji-config-updmap-sys', 'extconv', 'disdvi', 'pdvitomp', 'dvipdfm', 'texliveonfly', 'allneeded', 'htcontext', 't1testpage', 'biber', 'dv2dt', 'xindy', 'pdfbook2', 't1unmac', 'xelatex', 'webquiz', 'kpsepath', 'diadia', 'makeglossaries', 'cef5pdflatex', 'autoinst', 'dvilualatex-dev', 'mkpic', 'splitindex', 'repstopdf', 'otangle', 'mfplain', 'latexfileversion', 'latex-git-log', 'inimf', 'lualatex-dev', 'latex2man', 'ps2pk', 'htxetex', 'l3build', 'ptftopl', 'ptex', 'gbklatex', 't1binary', 'bibtex', 't1dotlessj', 'mktexpk', 'detex', 'htlatex', 'odvicopy', 'dvidvi', 'extractres', 'extractbb', 'tie', 'latexdef', 'tlmgr', 'arara', 'ctan-o-mat', 'rubibtex', 'dvigif', 'gftype', 'ketcindy', 'kpseaccess', 'luacsplain', 'cachepic', 'srcredact', 'dtxgen', 'mmafm', 'pktype', 'platex-dev', 'kpsexpand', 'pktogf', 'msxlint', 't1reencode', 'vftovp', 'xhlatex', 'ht', 'mendex', 'make4ht', 'ceflatex', 'texlinks', 'pmxchords', 'mptopdf', 'afm2pl', 'mktexmf', 'lamed', 'gftopk', 'ulqda', 'dvilj4l', 'pooltype', 'bg5latex', 'bibmradd', 'aleph', 'wovf2ovp', 'pdfetex', 'dvi2tty', 'ofm2opl', 'pslatex', 'initex', 'latexpand', 'pamphletangler', 'mkgrkindex', 'mtxrun', 'epsffit', 'listings-ext.sh', 'mktexfmt', 'scor2prt', 'psnup', 'ot2kpx', 'allcm', 'pk2bm', 'dvitomp', 'texindy', 'vpl2vpl', 'luatools', 'cef5latex', 'ctwill-refsort', 'luajithbtex', 'bg5+pdflatex', 'dvisvgm', 'tex2aspc', 'bg5conv', 'deweb', 'tlcockpit', 'cfftot1', 'dviselect', 'odvitype', 'vpl2ovp', 'otp2ocp', 'latexdiff', 'dt2dv', 'bg5pdflatex', 'mf2pt1', 'psresize', 't1mac', 'epspdf', 'pythontex', 'bibtexu', 'authorindex', 'texosquery', 'tlshell', 'pdfxmltex', 'includeres', 't1ascii', 'pdflatexpicscale', 'mfluajit', 'axohelp', 'tangle', 'httex', 'texosquery-jre8', 'checkcites', 'bibtex8', 'dvi2fax', 'otftotfm', 'cefspdflatex', 'mmpfb', 'pfb2pfa', 'vpe', 'psselect', 'latex-dev', 'findhyph', 'gregorio', 'ovp2ovf', 'utf8mex', 'mflua', 'purifyeps', 'autosp', 'bundledoc', 'mllatex', 'tex4ebook', 'xdvi-xaw', 'sjislatex', 'rungs', 'dvilj4', 'ltxfileinfo', 'texconfig', 'updvitype', 'ltximg', 'updmap-user', 'dvips', 'convertgls2bib', 'latex2nemeth', 'pdfjam', 'epstopdf', 'outocp', 'pedigree', 'mkocp', 'kpsereadlink', 'ttf2pk', 'tpic2pdftex', 'kanji-config-updmap-user', 'psjoin', 'm-tx', 'uppltotf', 'texdoc', 'bbox', 'dvired', 'latex-papersize', 'makeglossaries-lite', 't4ht', 'xdvi', 'ps2frag', 'wopl2ofm', 'devnag', 'ctanupload', 'texexec', 'listbib', 'cllualatex', 'lualatex', 'pmxab', 'jfmutil', 'pdfmex', 'tftopl', 'mltex', 'amstex', 'pbibtex', 'pstops', 'optex', 'mex', 'bibdoiadd', 'updmap', 'dvipos', 'luaotfload-tool', 'epspdftk', 'updmap-sys', 'r-upmpost', 'mktextfm', 'texfot', 'checklistings', 'rpdfcrop', 'a5toa4', 'installfont-tl', 'pdfcrop', 'pdfannotextractor'] ['xfs', 'xfsinfo', 'atobm', 'xdpyinfo', 'showrgb', 'xlsfonts', 'editres', 'fonttosfnt', 'xfontsel', 'xclock', 'xmore', 'xman', 'xmag', 'xrefresh', 'fc-list', 'xdmshell', 'xauth', 'twm', 'cxpm', 'mkfontdir', 'xclipboard', 'png-fix-itxt', 'ucs2any', 'xterm', 'bdftruncate', 'xsetroot', 'xmessage', 'xcursorgen', 'fc-pattern', 'xkbvleds', 'xkbbell', 'freetype-config', 'Xephyr', 'fc-validate', 'bitmap', 'libpng16-config', 'pngfix', 'fc-query', 'xkbprint', 'luit', 'xhost', 'gtf', 'listres', 'x11perf', 'Xorg', 'libpng-config', 'koi8rxterm', 'xpr', 'xstdcmap', 'xgc', 'mkfontscale', 'setxkbmap', 'xinit', 'Xquartz', 'xbacklight', 'xdm', 'xcmsdb', 'xdpr', 'xfindproxy', 'xrdb', 'xlsclients', 'xprop', 'xkeystone', 'xeyes', 'Xvfb', 'Xnest', 'xev', 'startx', 'xkbwatch', 'xscope', 'xfd', 'sessreg', 'xwud', 'lndir', 'xinput', 'xconsole', 'glxinfo', 'sxpm', 'xsetmode', 'Xfake', 'fslsfonts', 'xcompmgr', 'xrandr', 'bmtoa', 'xwd', 'xmodmap', 'glxgears', 'fc-cache', 'iceauth', 'cvt', 'xcutsel', 'bdftopcf', 'fc-cat', 'xsetpointer', 'xkbevd', 'quartz-wm', 'xsm', 'appres', 'xset', 'xlsatoms', 'fc-match', 'oclock', 'x11perfcomp', 'resize', 'showfont', 'xditview', 'xwininfo', 'xvinfo', 'xcalc', 'xgamma', 'makedepend', 'viewres', 'ico', 'X', 'gccmakedep', 'xedit', 'smproxy', 'xkill', 'xkbcomp', 'xload', 'font_cache', 'xmh', 'xlogo', 'fstobdf', 'uxterm', 'fc-scan'] Path provided by --with-executables-search-path ['win32fe.exe', 'win32feutils.dll'] Checking for program /Users/kongf/miniconda3/envs/testpetsc/bin/opt/rocm/bin/hipcc...not found Checking for program /Users/kongf/miniconda3/condabin/opt/rocm/bin/hipcc...not found Checking for program /usr/local/bin/opt/rocm/bin/hipcc...not found Checking for program /usr/bin/opt/rocm/bin/hipcc...not found Checking for program /bin/opt/rocm/bin/hipcc...not found Checking for program /usr/sbin/opt/rocm/bin/hipcc...not found Checking for program /sbin/opt/rocm/bin/hipcc...not found Checking for program /Library/TeX/texbin/opt/rocm/bin/hipcc...not found Checking for program /opt/X11/bin/opt/rocm/bin/hipcc...not found Checking for program /Users/kongf/projects/moose6/petsc/lib/petsc/bin/win32fe/opt/rocm/bin/hipcc...not found Unable to find programs ['opt/rocm/bin/hipcc'] providing listing of each search directory to help debug Path provided in Python program Path provided by default path ['x86_64-apple-darwin13.4.0-pagestuff', 'llvm-opt-report', 'llvm-lipo', 'modularize', 'llvm-cxxdump', 'mpif90', 'clang-change-namespace', 'verify-uselistorder', 'llvm-cvtres', 'x86_64-apple-darwin13.4.0-check_dylib', 'hydra_pmi_proxy', 'llvm-strings', 'clang-move', 'x86_64-apple-darwin13.4.0-ranlib', 'llvm-install-name-tool', 'clangd-xpc-test-client', 'clang', 'llvm-lto2', 'x86_64-apple-darwin13.4.0-nmedit', 'mpirun', 'llvm-cfi-verify', 'llvm-cov', 'x86_64-apple-darwin13.4.0-install_name_tool', 'llc', 'gfortran', 'llvm-link', 'llvm-symbolizer', 'llvm-objdump', 'x86_64-apple-darwin13.4.0-strings', 'clang-refactor', 'clang-rename', 'x86_64-apple-darwin13.4.0-mtoc', 'clangd', 'llvm-mca', 'set-xcode-analyzer', 'iconv', 'llvm-rc', '-clang++', 'mpiexec.hydra', 'clang-include-fixer', 'x86_64-apple-darwin13.4.0-libtool', 'x86_64-apple-darwin13.4.0-lipo', 'x86_64-apple-darwin13.4.0-vtool', 'llvm-addr2line', 'llvm-jitlink', 'x86_64-apple-darwin13.4.0-as', 'llvm-xray', 'x86_64-apple-darwin13.4.0-size', 'clang-format', 'llvm-rtdyld', 'x86_64-apple-darwin13.4.0-codesign_allocate', 'clang-check', 'llvm-lto', 'pp-trace', 'llvm-c-test', 'x86_64-apple-darwin13.4.0-seg_hack', 'x86_64-apple-darwin13.4.0-ar', 'c-index-test', 'llvm-dwp', 'x86_64-apple-darwin13.4.0-segedit', 'x86_64-apple-darwin13.4.0-redo_prebinding', 'x86_64-apple-darwin13.4.0-nm', 'x86_64-apple-darwin13.4.0-clang', 'llvm-reduce', 'llvm-elfabi', 'x86_64-apple-darwin13.4.0-checksyms', 'llvm-mc', 'mpivars', 'clang-reorder-fields', 'x86_64-apple-darwin13.4.0-strip', 'llvm-exegesis', 'x86_64-apple-darwin13.4.0-cmpdylib', 'llvm-readelf', 'llvm-as', 'clang-query', 'scan-build', 'llvm-nm', 'llvm-lib', 'llvm-undname', 'x86_64-apple-darwin13.4.0-unwinddump', 'mpif77', 'x86_64-apple-darwin13.4.0-ObjectDump', 'llvm-ml', 'clang-offload-bundler', 'x86_64-apple-darwin13.4.0-inout', 'llvm-ar', 'find-all-symbols', 'clang-cl', 'llvm-dis', 'x86_64-apple-darwin13.4.0-makerelocs', 'llvm-size', 'mpichversion', 'x86_64-apple-darwin13.4.0-clang++', 'mpicc', 'dsymutil', 'obj2yaml', 'x86_64-apple-darwin13.4.0-bitcode_strip', 'x86_64-apple-darwin13.4.0-machocheck', 'clang-tidy', 'llvm-dlltool', 'llvm-readobj', 'llvm-cxxfilt', 'bugpoint', 'llvm-pdbutil', 'clang-offload-wrapper', 'clang-doc', 'llvm-ifs', 'parkill', 'lli', 'llvm-tblgen', 'mpicxx', 'clang-scan-deps', 'x86_64-apple-darwin13.4.0-dyldinfo', 'x86_64-apple-darwin13.4.0-ctf_insert', 'clang++', 'x86_64-apple-darwin13.4.0-mtor', 'sancov', 'x86_64-apple-darwin13.4.0-gfortran', 'x86_64-apple-darwin13.4.0-ld', 'llvm-dwarfdump', 'opt', 'ldid', 'clang-cpp', 'clang-11', 'clang-extdef-mapping', 'llvm-cat', 'git-clang-format', 'llvm-profdata', 'clang-apply-replacements', 'llvm-objcopy', 'llvm-extract', 'yaml2obj', 'sanstats', 'x86_64-apple-darwin13.4.0-otool', 'llvm-split', 'llvm-bcanalyzer', 'hydra_persist', 'mpiexec', 'hmaptool', 'llvm-stress', 'llvm-diff', 'x86_64-apple-darwin13.4.0-seg_addr_table', 'scan-view', 'diagtool', 'mpic++', 'mpifort', 'llvm-modextract', 'hydra_nameserver', 'llvm-gsymutil', 'llvm-strip', 'llvm-mt', 'x86_64-apple-darwin13.4.0-indr', 'llvm-ranlib', 'llvm-cxxmap'] ['conda'] ['dvipdf', 'ps2ps', 'gs-noX11', 'gs', 'apm', 'atom', 'ps2pdfwr', 'ps2pdf12', 'gsdj', 'pdf2dsc', 'ps2pdf14', 'gsnd', 'ps2pdf13', 'gs-X11', 'pphs', 'gsdj500', 'ps2ascii', 'ps2pdf', 'pf2afm', 'pfbtopfa', 'gslp', 'printafm', 'ps2ps2', 'gslj', 'ps2epsi', 'gsbj', 'unix-lpr.sh', 'pdf2ps', 'eps2eps', 'lprsetup.sh'] ['uux', 'cpan', 'BuildStrings', 'loads.d', 'write', 'indent', 'bzip2recover', 'hdiutil', 'top', 'javah', 'pstruct5.18', 'tee', 'binhex5.18.pl', 'xip', 'wsimport', 'bzfgrep', 'qlmanage', 'snmptranslate', 'split', 'chsh', 'stty.pl', 'xml2man', 'iprofiler', 'man', 'lpoptions', 'tabs', 'smtpd2.7.py', 'rview', 'lsvfs', 'zgrep', 'dbiprof', 'zmore', 'corelist5.28', 'cpanp-run-perl', 'gcov', 'iptab5.28', 'svn', 'vim', 'idle2.7', 'macerror5.18', 'xjc', 'lwp-request5.18', 'bzmore', 'package-stash-conflicts', 'cancel', 'apply', 'bzgrep', 'umask', 'g++', 'libtool', 'pre-grohtml', 'colcrt', 'phpize', 'unalias', 'mp2bug', 'groff', 'mkfifo', 'toe', 'hexdump', 'spfd5.18', 'idle', 'crc325.18', 'Rez', 'cap_mkdb', 'ictool', 'cmp', 'syscallbypid.d', 'snmpset', 'locate', 'binhex5.28.pl', 'afconvert', 'afclip', 'bzegrep', 'neqn', 'instmodsh', 'extcheck', 'javapackager', 'pl', 'compress', 'corelist5.18', 'fddist', 'db_upgrade', 'diagnose-fu', 'ctags', 'iptab5.18', 'zdiff', 'macerror5.28', 'pathchk', 'mesg', 'setregion', 'perlivp', 'c++', 'pod2readme', 'vi', 'iofileb.d', 'errinfo', 'zipgrep', 'pod2usage', 'alias', 'wait', 'psed5.18', 'safaridriver', 'bzdiff', 'lwp-request5.28', 'unpack200', 'corelist', 'expand', 'strings', 'appletviewer', 'idlj', 'wall', 'spfd5.28', 'brctl', 'crc325.28', 'gm4', 'db_hotbackup', 'auvaltool', 'applesingle', 'clang', 'ibtool', 'tty', 'git-receive-pack', 'infotocap', 'pkill', 'pwhich5.18', 'cups-config', 'basename', 'nclist', 'objdump', 'install', 'native2ascii', 'c99', 'desdp', 'binhex', 'lsmp', 'xmllint', 'texi2pdf', 'last', 'vm_stat', 'syslog', 'spfquery5.18', 'net-snmp-cert', 'nslookup', 'prove5.18', 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'json_xs', 'pkgbuild', 'perlivp5.28', 'cpuwalk.d', 'cvmkfile', 'update_dyld_shared_cache', 'easy_install', 'pydoc', 'ldapmodrdn', 'systemextensionsctl', 'file', 'db_printlog', 'python', 'hash', 'bc', 'fontrestore', 'mg', 'python2', 'cpanp-run-perl5.18', 'sfltool', 'less', 'pod2latex', 'bunzip2', 'pythonw', 'touch', 'asctl', 'rmic', 'dispqlen.d', 'db_archive', 'refer', 'getopt', 'krb5-config', 'security', 'lwp-download5.28', 'hiutil', 'csdiagnose', 'pip3', 'enc2xs5.18', 'lastwords', 'rmid', 'stty5.28.pl', 'podchecker5.18', 'sed', 'ld', 'awk', 'ip2cc', 'syscallbyproc.d', 'snmpstatus', 'uudecode', 'UnRezWack', 'fmt', 'perlthanks5.18', 'zipdetails5.28', 'zless', 'xslt-config', 'sdef', 'pod2man5.18', 'ncctl', 'jmc', 'encguess5.28', 'pod2text', 'c2ph5.18', 'bashbug', 'mail', 'chpass', 'sips', 'xcrun', 'bzcmp', 'lldb', 'python2.7-config', 'piconv5.28', 'chfn', 'ipcount', 'newaliases', 'nano', 'eyapp5.18', 'pfbtops', 'lam', 'ipptool', 'irb', 'ipcount5.28', 'ptardiff', 'bzless', 'perlbug5.28', 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'mailq', 'arch', 'ssh-keygen', 'snmptable', 'kill.d', 'pod2readme5.28', 'ditto', 'getopts', 'users', 'snmpbulkget', 'sdp', 'shasum5.28', 'showmount', 'taskinfo', 'ar', 'perldoc5.18', 'who', 'mktemp', 'unifdef', 'yaa', 'cut', 'imptrace', 'pack200', 'net-server5.28', 'ippeveprinter', 'hdid', 'dc', 'biff', 'perl5.28', 'mailx', 'odutil', 'jsadebugd', 'xargs', 'texi2dvi', 'debinhex5.18.pl', 'priclass.d', 'pod2latex5.18', 'ptardiff5.28', 'topsysproc', 'nl', 'dbilogstrip5.18', 'view', 'jjs', 'spfquery', 'sample', 'bg', 'lipo', 'seeksize.d', 'eyapp', 'clang++', 'setuids.d', 'shlock', 'symbols', 'afmtodit', 'gzexe', 'mkdep', 'a2p5.18', 'genstrings', 'at', 'what', 'sdx', 'm4', 'asa', 'iptab', 'format-sql5.18', 'swiftc', 'nfsstat', 'svnversion', 'uupick', 'ipcs', 'pod2readme5.18', 'pluginkit', 'as', 'MvMac', 'net-server5.18', 'fold', 'gnumake', 'perl5.18', 'log', 'tmutil', 'checknr', 'certtool', 'python2.7', 'vmmap', 'shasum5.18', 'h2xs', 'csrutil', 'shar', 'perldoc5.28', 'ldappasswd', 'lkbib', 'ResMerger', 'bitesize.d', 'db_checkpoint', 'funzip', 'power_report.sh', 'iosnoop', 'atsutil', 'osalang', 'dirname', 'pod2man', 'enc2xs', 'treereg5.28', 'moo-outdated', 'xgettext5.28.pl', 'iopending', 'infokey', 'ncal', 'cpan5.28', 'chflags', 'find2perl5.18', 'fg', 'rwbypid.d', 'jmap', 'dscl', 'leaks', 'splain5.18', 'nbdst', 'mnthome', 'jshell', 'dsexport', 'mdimport', 'id', 'procsystime', 'cd', 'quota', 'uuto', 'fuser', 'dsimport', 'csgather', 'json_pp5.28', 'git-shell', 'ldapsearch', 'command', 'snmp-bridge-mib', 'egrep', 'notifyutil', 'cc', 'dsmemberutil', 'podselect', 'pod2html5.28', 'grn', 'psed', 'whereis', 'tccutil', 'a2p', 'find', 'jstat', 'zcat', 'ip2cc5.18', 'unifdefall', 'nroff', 'pridist.d', 'size', 'timesyncanalyse', 'libnetcfg5.28', 'uustat', 'snmpwalk', 'llvm-g++', 'scp', 'instmodsh5.18', 'tnameserv', 'true', 'afinfo', 'hidutil', 'ldapadd', 'pwpolicy', 'profiles', 'yacc', 'kswitch', 'xcodebuild', 'jobs', 'c89', 'sudo', 'bioutil', 'splain5.28', 'tmdiagnose', 'plockstat', 'xgettext5.18.pl', 'serialver', 'afida', 'pgrep', 'yes', 'lessecho', 'sdiff', 'afscexpand', 'treereg5.18', 'cpan5.18', 'db_deadlock', 'ldapcompare', 'unexpand', 'git-upload-pack', 'ssh-copy-id', 'grolj4', 'fixproc', 'debinhex.pl', 'lorder', 'pod2html5.18', 'ranlib', 'javadoc', 'tput', 'fgrep', 'json_pp5.18', 'sigdist.d', 'ppdhtml', 'libnetcfg5.18', 'auval', 'erb', 'dappprof', 'openssl', 'instmodsh5.28', 'drutil', 'jinfo', 'ip2cc5.28', 'splain', 'pmset', 'xmlcatalog', 'zcmp', 'ptargrep5.28', 'lwp-mirror5.28', 'rwsnoop', 'jstatd', 'htmltree5.28', 'lpr', 'layerutil', 'snmptest', 'mib2c-update', 'grog', 'creatbyproc.d', 'pstruct', 'fdesetup', 'flex', 'hostinfo', 'jcontrol', 'MergePef', 'lpstat', 'SetFile', 'pl2pm5.28', 'pod2html', 'rebase', 'tar', 'rdoc', 'uptime', 's2p', 'pidpersec.d', 'xpath5.18', 'schemagen', 'moo-outdated5.28', 'pod2usage5.28', 'dbiprof5.28', 'cvcp', 'package-stash-conflicts5.28', 'false', 'zegrep', 'memory_pressure', 'uncompress', 'lwp-request', 'ncurses5.4-config', 'findrule5.28', 'sampleproc', 'db_recover', 'ptar5.28', 'h2xs5.28', 'nmedit', 'filebyproc.d', 'bison', 'tclsh8.5', 'jdeps', 'productbuild', 'zipinfo', 'diffstat', 'login', 'db_dump', 'smtpd.py', 'cpuctl', 'cpu_profiler.d', 'which', 'bundler', 'iopattern', 'finger', 'mig', 'sntp', 'klist', 'open', 'GetFileInfo', 'localedef', 'ruby', 'stringdups', 'htmltree', 'ptargrep5.18', 'git', 'tr', 'lwp-mirror5.18', 'htmltree5.18', 'banner', 'leave', 'jconsole', 'paste', 'RezWack', 'moo-outdated5.18', 'bzip2', 'pod2usage5.18', 'uucp', 'passwd', 'dbiprof5.18', 'package-stash-conflicts5.18', 'uuidgen', 'pl2pm5.18', 'install_name_tool', 'cmpdylib', 'makeinfo', 'php-config', 'zfgrep', 'xpath5.28', 'snfsdefrag', 'zipdetails', 'look', 'findrule5.18', 'col', 'dscacheutil', 'ptar5.18', 'zforce', 'lwp-mirror', 'malloc_history', 'cpio', 'nohup', 'kcc', 'ulimit', 'rails', 'bspatch', 'RezDet', 'hotspot.d', 'cvaffinity', 'gatherheaderdoc', 'ppdi', 'pcap-config', 'avmetareadwrite', 'update_dyld_shared_cache_root_mode', 'gen_bridge_metadata', 'gem', 'opendiff', 'h2xs5.18', 'talk', 'expect', 'jimage', 'lockstat', 'dapptrace', 'install-info', 'xattr', 'w', 'gunzip'] ['cat', 'echo', 'launchctl', 'df', 'pwd', 'test', 'csh', 'wait4path', 'unlink', 'sleep', 'stty', 'date', 'ed', 'expr', 'pax', 'bash', 'kill', 'sh', 'ps', 'link', 'tcsh', 'dd', 'mkdir', 'ksh', 'hostname', 'dash', 'rmdir', 'mv', 'ln', 'ls', 'cp', 'sync', 'zsh', 'chmod', 'rm', '['] ['dsconfigad', 'htdbm', 'netbiosd', 'postlock', 'systemsoundserverd', 'dseditgroup', 'avbdeviced', 'rpcinfo', 'BootCacheControl', 'weakpass_edit', 'periodic', 'accton', 'wfsctl', 'postalias', 'slapacl', 'edquota', 'sndiskmove', 'pdisk', 'amt', 'lpadmin', 'fdisk', 'sysadminctl', 'networksetup', 'envvars', 'ktutil', 'setquota', 'otctl', 'sncfgvalidate', 'php-fpm', 'AppleFileServer', 'dnctl', 'mDNSResponder', 'repquota', 'cupsfilter', 'checkgid', 'uuconv', 'sharing', 'vifs', 'ac', 'racoon', 'dsenableroot', 'xsanctl', 'kdcsetup', 'aslmanager', 'screencapture', 'htdigest', 'rtsold', 'chat', 'DevToolsSecurity', 'logresolve', 'cvdbset', 'KernelEventAgent', 'gpt', 'scutil', 'ioreg', 'ab', 'traceroute6', 'pwd_mkdb', 'sysctl', 'appsleepd', 'sshd', 'mDNSResponderHelper', 'authserver', 'sncfginstall', 'postmulti', 'lsof', 'pkgutil', 'slapindex', 'sc_auth', 'ioclasscount', 'uucico', 'firmwarepasswd', 'rarpd', 'tsig-keygen', 'kadmin.local', 'syslogd', 'taskpolicy', 'filecoordinationd', 'dot_clean', 'PasswordService', 'systemsetup', 'zdump', 'snmpd', 'ndp', 'coreaudiod', 'rpcbind', 'praudit', 'usernoted', 'postkick', 'postcat', 'netstat', 'lpc', 'slapadd', 'krbservicesetup', 'sncfgtemplate', 'slapconfig', 'rtadvd', 'httxt2dbm', 'distnoted', 'mtree', 'cupsdisable', 'lpmove', 'disktool', 'purge', 'rpc.statd', 'cupsctl', 'DirectoryService', 'notifyd', 'klist_cdhashes', 'dtrace', 'kextcache', 'cupsd', 'dbmmanage', 'languagesetup', 'skywalkctl', 'mkpassdb', 'postconf', 'createhomedir', 'ocspd', 'iostat', 'cvdb', 'sa', 'rpc.lockd', 'uuxqt', 'mkfile', 'softwareupdate', 'unsetpassword', 'zic', 'nfs4mapid', 'postsuper', 'htpasswd', 'rotatelogs', 'universalaccessd', 'audit', 'httpd', 'bluetoothaudiod', 'slapauth', 'slappasswd', 'localemanager', 'asr', 'cvupdatefs', 'bless', 'cvgather', 'xscertadmin', 'visudo', 'uusched', 'dsconfigldap', 'smbdiagnose', 'cfprefsd', 'auditd', 'uuchk', 'cvfsck', 'kextfind', 'diskutil', 'cvfsid', 'sso_util', 'vsdbutil', 'ddns-confgen', 'ioalloccount', 'uasysdiagnose', 'dev_mkdb', 'hdik', 'slapdn', 'vpnd', 'postqueue', 'setkey', 'tpctl', 'repairHomePermissions', 'spindump', 'cupsreject', 'traceroute', 'quotaoff', 'newsyslog', 'postfix', 'cvfsdb', 'snmptrapd', 'chroot', 'arp', 'cupsaccept', 'nvram', 'chown', 'mkextunpack', 'sncfgremove', 'sncfgquery', 'postlog', 'installer', 'pppd', 'httpd-wrapper', 'system_profiler', 'fcgistarter', 'bluetoothd', 'slapschema', 'kadmin', 'spray', 'cvversions', 'kextlibs', 'tcpdump', 'xartutil', 'securityd', 'nlcontrol', 'quotaon', 'spctl', 'vipw', 'gssd', 'slaptest', 'automount', 'scselect', 'envvars-std', 'graphicssession', 'ckksctl', 'lpinfo', 'smbd', 'serverinfo', 'cvmkfs', 'postmap', 'postdrop', 'cupsenable', 'cron', 'systemstats', 'bnepd', 'kextstat', 'cvlabel', 'sendmail', 'systemkeychain', 'kcditto', 'slapcat', 'ipconfig', 'auditreduce', 'cvadmin', 'WirelessRadioManagerd', 'apachectl', 'htcacheclean'] ['mount_hfs', 'mount_apfs', 'md5', 'fsck', 'mount_udf', 'quotacheck', 'mount_cd9660', 'ping', 'fsck_exfat', 'mount_exfat', 'fsck_udf', 'shutdown', 'route', 'mount_webdav', 'fsck_hfs', 'nfsd', 'reboot', 'nfsiod', 'fsck_cs', 'fsck_apfs', 'fstyp_msdos', 'disklabel', 'mount_msdos', 'fsck_msdos', 'ifconfig', 'halt', 'mount_9p', 'mount_ntfs', 'rtsol', 'newfs_apfs', 'umount', 'fstyp', 'kextunload', 'mpioutil', 'fstyp_ntfs', 'emond', 'mount_nfs', 'newfs_udf', 'mount_ftp', 'pfctl', 'mknod', 'fstyp_udf', 'dmesg', 'mount', 'fibreconfig', 'fstyp_hfs', 'newfs_hfs', 'dynamic_pager', 'launchd', 'newfs_exfat', 'apfs_hfs_convert', 'nologin', 'mount_afp', 'mount_smbfs', 'ping6', 'kextload', 'mount_cddafs', 'mount_fdesc', 'newfs_msdos', 'mount_acfs', 'mount_devfs'] ['luajittex', 'lollipop', 't1disasm', 'chktex', 'rubikrotation', 'lily-rebuild-pdfs', 'weave', 'mag', 'man', 'ebb', 'prepmx', 'mktexlsr', 'gsftopk', 'upmendex', 'dvibook', 'kpsewhere', 'rumakeindex', 'fontinst', 'cef5conv', 'lacheck', 'httexi', 'lily-image-commands', 'texloganalyser', 'dvilj', 'patgen', 'uptex', 'exceltex', 'pdvitype', 'texconfig-sys', 'xmltex', 'vlna', 'texsis', 'dvipdft', 'urlbst', 'pdfcslatex', 'afm2afm', 'cefconv', 'uplatex-dev', 'sjisconv', 'tex2xindy', 'musixtex', 'pdfcsplain', 'opl2ofm', 'de-macro', 'bbl2bib', 'ltx2crossrefxml', 'pdftex', 'r-mpost', 'dvitodvi', 'gftodvi', 'dviconcat', 'texluajitc', 'dvipng', 'pdflatex-dev', 'komkindex', 'tex', 'sty2dtx', 'ppltotf', 'yplan', 'eplain', 'eptex', 'lily-glyph-commands', 'htmex', 'texlua', 'htxelatex', 'xasy', 'fmtutil-user', 'wovp2ovf', 'dvilualatex', 'cefsconv', 'context', 'platex', 'allec', 'adhocfilelist', 'kpsetool', 'makejvf', 'texdoctk', 'xelatex-dev', 'vptovf', 'tex4ht', 'texluajit', 'mtxrunjit', 'uplatex', 'musixflx', 'pfarrei', 'mf', 'latexdiff-vc', 'ttfdump', 'etex', 'fig4latex', 'bibexport', 'ttf2tfm', 'latexmk', 'pmpost', 'ctwill', 'pst2pdf', 'wordcount', 'texconfig-dialog', 'luahbtex', 'lwarpmk', 'dvilj2p', 'dviinfox', 'ttf2kotexfont', 'ctanbib', 'cweave', 'bg5+latex', 'pdfatfi', 'ptex2pdf', 'e2pall', 'kpsewhich', 'upbibtex', 'texdiff', 'mathspic', 'kanji-fontmap-creator', 'kanji-config-updmap', 'asy', 'typeoutfileinfo', 'chklref', 'upmpost', 'pdflatex', 'perltex', 'mkt1font', 'cefslatex', 'cjk-gs-integrate', 'chkdvifont', 'dvitype', 'pdfjadetex', 't1lint', 'jamo-normalize', 'fmtutil-sys', 'wofm2opl', 'dviasm', 'kpsestat', 'pdfxup', 'makedtx', 'pltotf', 'mkindex', 'dvilj6', 'r-pmpost', 'xindy.mem', 'xetex', 'latex', 'ps4pdf', 'multibibliography', 'teckit_compile', 'ttf2afm', 'biburl2doi', 'getmapdl', 'uptftopl', 'contextjit', 'bib2gls', 'texplate', 'match_parens', 'mkjobtexmf', 'updvitomp', 'ps2eps', 'pkfix-helper', 'chkweb', 'arlatex', 'pn2pdf', 'pdfclose', 'xindex', 'clxelatex', 'dosepsbin', 'jadetex', 'a2ping', 'bibzbladd', 'ovf2ovp', 'mfluajit-nowin', 'mpost', 'texosquery-jre5', 'texhash', 'convbkmk', 'thumbpdf', 'pkfix', 'dvihp', 'hbf2gf', 'xindy.run', 'texcount', 'texmfstart', 'latexrevise', 'cefpdflatex', 'texluac', 'dvicopy', 'ctie', 'pdftex-quiet', 'euptex', 'pdftosrc', 'mf-nowin', 'ctangle', 'omfonts', 't1asm', 'mflua-nowin', 'cluttex', 'svn-multi', 'mk4ht', 'afm2tfm', 'pdfopen', 'fragmaster', 'ebong', 'ctanify', 'pygmentex', 'texdef', 'luatex', 'cslatex', 'synctex', 'texdirflatten', 'gbkpdflatex', 'xdvipdfmx', 'sjispdflatex', 'makeindex', 'dviluatex', 'mkofm', 'dvipdfmx', 'psbook', 'dvispc', 'csplain', 'ttftotype42', 'mft', 't1rawafm', 'fmtutil', 'ctwill-twinx', 'simpdftex', 'depythontex', 'otfinfo', 'latexindent', 'kanji-config-updmap-sys', 'extconv', 'disdvi', 'pdvitomp', 'dvipdfm', 'texliveonfly', 'allneeded', 'htcontext', 't1testpage', 'biber', 'dv2dt', 'xindy', 'pdfbook2', 't1unmac', 'xelatex', 'webquiz', 'kpsepath', 'diadia', 'makeglossaries', 'cef5pdflatex', 'autoinst', 'dvilualatex-dev', 'mkpic', 'splitindex', 'repstopdf', 'otangle', 'mfplain', 'latexfileversion', 'latex-git-log', 'inimf', 'lualatex-dev', 'latex2man', 'ps2pk', 'htxetex', 'l3build', 'ptftopl', 'ptex', 'gbklatex', 't1binary', 'bibtex', 't1dotlessj', 'mktexpk', 'detex', 'htlatex', 'odvicopy', 'dvidvi', 'extractres', 'extractbb', 'tie', 'latexdef', 'tlmgr', 'arara', 'ctan-o-mat', 'rubibtex', 'dvigif', 'gftype', 'ketcindy', 'kpseaccess', 'luacsplain', 'cachepic', 'srcredact', 'dtxgen', 'mmafm', 'pktype', 'platex-dev', 'kpsexpand', 'pktogf', 'msxlint', 't1reencode', 'vftovp', 'xhlatex', 'ht', 'mendex', 'make4ht', 'ceflatex', 'texlinks', 'pmxchords', 'mptopdf', 'afm2pl', 'mktexmf', 'lamed', 'gftopk', 'ulqda', 'dvilj4l', 'pooltype', 'bg5latex', 'bibmradd', 'aleph', 'wovf2ovp', 'pdfetex', 'dvi2tty', 'ofm2opl', 'pslatex', 'initex', 'latexpand', 'pamphletangler', 'mkgrkindex', 'mtxrun', 'epsffit', 'listings-ext.sh', 'mktexfmt', 'scor2prt', 'psnup', 'ot2kpx', 'allcm', 'pk2bm', 'dvitomp', 'texindy', 'vpl2vpl', 'luatools', 'cef5latex', 'ctwill-refsort', 'luajithbtex', 'bg5+pdflatex', 'dvisvgm', 'tex2aspc', 'bg5conv', 'deweb', 'tlcockpit', 'cfftot1', 'dviselect', 'odvitype', 'vpl2ovp', 'otp2ocp', 'latexdiff', 'dt2dv', 'bg5pdflatex', 'mf2pt1', 'psresize', 't1mac', 'epspdf', 'pythontex', 'bibtexu', 'authorindex', 'texosquery', 'tlshell', 'pdfxmltex', 'includeres', 't1ascii', 'pdflatexpicscale', 'mfluajit', 'axohelp', 'tangle', 'httex', 'texosquery-jre8', 'checkcites', 'bibtex8', 'dvi2fax', 'otftotfm', 'cefspdflatex', 'mmpfb', 'pfb2pfa', 'vpe', 'psselect', 'latex-dev', 'findhyph', 'gregorio', 'ovp2ovf', 'utf8mex', 'mflua', 'purifyeps', 'autosp', 'bundledoc', 'mllatex', 'tex4ebook', 'xdvi-xaw', 'sjislatex', 'rungs', 'dvilj4', 'ltxfileinfo', 'texconfig', 'updvitype', 'ltximg', 'updmap-user', 'dvips', 'convertgls2bib', 'latex2nemeth', 'pdfjam', 'epstopdf', 'outocp', 'pedigree', 'mkocp', 'kpsereadlink', 'ttf2pk', 'tpic2pdftex', 'kanji-config-updmap-user', 'psjoin', 'm-tx', 'uppltotf', 'texdoc', 'bbox', 'dvired', 'latex-papersize', 'makeglossaries-lite', 't4ht', 'xdvi', 'ps2frag', 'wopl2ofm', 'devnag', 'ctanupload', 'texexec', 'listbib', 'cllualatex', 'lualatex', 'pmxab', 'jfmutil', 'pdfmex', 'tftopl', 'mltex', 'amstex', 'pbibtex', 'pstops', 'optex', 'mex', 'bibdoiadd', 'updmap', 'dvipos', 'luaotfload-tool', 'epspdftk', 'updmap-sys', 'r-upmpost', 'mktextfm', 'texfot', 'checklistings', 'rpdfcrop', 'a5toa4', 'installfont-tl', 'pdfcrop', 'pdfannotextractor'] ['xfs', 'xfsinfo', 'atobm', 'xdpyinfo', 'showrgb', 'xlsfonts', 'editres', 'fonttosfnt', 'xfontsel', 'xclock', 'xmore', 'xman', 'xmag', 'xrefresh', 'fc-list', 'xdmshell', 'xauth', 'twm', 'cxpm', 'mkfontdir', 'xclipboard', 'png-fix-itxt', 'ucs2any', 'xterm', 'bdftruncate', 'xsetroot', 'xmessage', 'xcursorgen', 'fc-pattern', 'xkbvleds', 'xkbbell', 'freetype-config', 'Xephyr', 'fc-validate', 'bitmap', 'libpng16-config', 'pngfix', 'fc-query', 'xkbprint', 'luit', 'xhost', 'gtf', 'listres', 'x11perf', 'Xorg', 'libpng-config', 'koi8rxterm', 'xpr', 'xstdcmap', 'xgc', 'mkfontscale', 'setxkbmap', 'xinit', 'Xquartz', 'xbacklight', 'xdm', 'xcmsdb', 'xdpr', 'xfindproxy', 'xrdb', 'xlsclients', 'xprop', 'xkeystone', 'xeyes', 'Xvfb', 'Xnest', 'xev', 'startx', 'xkbwatch', 'xscope', 'xfd', 'sessreg', 'xwud', 'lndir', 'xinput', 'xconsole', 'glxinfo', 'sxpm', 'xsetmode', 'Xfake', 'fslsfonts', 'xcompmgr', 'xrandr', 'bmtoa', 'xwd', 'xmodmap', 'glxgears', 'fc-cache', 'iceauth', 'cvt', 'xcutsel', 'bdftopcf', 'fc-cat', 'xsetpointer', 'xkbevd', 'quartz-wm', 'xsm', 'appres', 'xset', 'xlsatoms', 'fc-match', 'oclock', 'x11perfcomp', 'resize', 'showfont', 'xditview', 'xwininfo', 'xvinfo', 'xcalc', 'xgamma', 'makedepend', 'viewres', 'ico', 'X', 'gccmakedep', 'xedit', 'smproxy', 'xkill', 'xkbcomp', 'xload', 'font_cache', 'xmh', 'xlogo', 'fstobdf', 'uxterm', 'fc-scan'] Path provided by --with-executables-search-path ['win32fe.exe', 'win32feutils.dll'] ================================================================================ TEST checkHIPPreprocessor from config.setCompilers(/Users/kongf/projects/moose6/petsc/config/BuildSystem/config/setCompilers.py:845) TESTING: checkHIPPreprocessor from config.setCompilers(config/BuildSystem/config/setCompilers.py:845) Placeholder for now ================================================================================ TEST checkSYCLCompiler from config.setCompilers(/Users/kongf/projects/moose6/petsc/config/BuildSystem/config/setCompilers.py:866) TESTING: checkSYCLCompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:866) Locate a functional SYCL compiler ================================================================================ TEST checkSYCLPreprocessor from config.setCompilers(/Users/kongf/projects/moose6/petsc/config/BuildSystem/config/setCompilers.py:892) TESTING: checkSYCLPreprocessor from config.setCompilers(config/BuildSystem/config/setCompilers.py:892) Placeholder for now ================================================================================ TEST checkCxxCompiler from config.setCompilers(/Users/kongf/projects/moose6/petsc/config/BuildSystem/config/setCompilers.py:981) TESTING: checkCxxCompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:981) Locate a functional Cxx compiler Checking for program /Users/kongf/miniconda3/envs/testpetsc/bin/mpiicpc...not found Checking for program /Users/kongf/projects/moose6/petsc/lib/petsc/bin/win32fe/mpiicpc...not found Unable to find programs ['mpiicpc'] providing listing of each search directory to help debug Path provided in Python program ['x86_64-apple-darwin13.4.0-pagestuff', 'llvm-opt-report', 'llvm-lipo', 'modularize', 'llvm-cxxdump', 'mpif90', 'clang-change-namespace', 'verify-uselistorder', 'llvm-cvtres', 'x86_64-apple-darwin13.4.0-check_dylib', 'hydra_pmi_proxy', 'llvm-strings', 'clang-move', 'x86_64-apple-darwin13.4.0-ranlib', 'llvm-install-name-tool', 'clangd-xpc-test-client', 'clang', 'llvm-lto2', 'x86_64-apple-darwin13.4.0-nmedit', 'mpirun', 'llvm-cfi-verify', 'llvm-cov', 'x86_64-apple-darwin13.4.0-install_name_tool', 'llc', 'gfortran', 'llvm-link', 'llvm-symbolizer', 'llvm-objdump', 'x86_64-apple-darwin13.4.0-strings', 'clang-refactor', 'clang-rename', 'x86_64-apple-darwin13.4.0-mtoc', 'clangd', 'llvm-mca', 'set-xcode-analyzer', 'iconv', 'llvm-rc', '-clang++', 'mpiexec.hydra', 'clang-include-fixer', 'x86_64-apple-darwin13.4.0-libtool', 'x86_64-apple-darwin13.4.0-lipo', 'x86_64-apple-darwin13.4.0-vtool', 'llvm-addr2line', 'llvm-jitlink', 'x86_64-apple-darwin13.4.0-as', 'llvm-xray', 'x86_64-apple-darwin13.4.0-size', 'clang-format', 'llvm-rtdyld', 'x86_64-apple-darwin13.4.0-codesign_allocate', 'clang-check', 'llvm-lto', 'pp-trace', 'llvm-c-test', 'x86_64-apple-darwin13.4.0-seg_hack', 'x86_64-apple-darwin13.4.0-ar', 'c-index-test', 'llvm-dwp', 'x86_64-apple-darwin13.4.0-segedit', 'x86_64-apple-darwin13.4.0-redo_prebinding', 'x86_64-apple-darwin13.4.0-nm', 'x86_64-apple-darwin13.4.0-clang', 'llvm-reduce', 'llvm-elfabi', 'x86_64-apple-darwin13.4.0-checksyms', 'llvm-mc', 'mpivars', 'clang-reorder-fields', 'x86_64-apple-darwin13.4.0-strip', 'llvm-exegesis', 'x86_64-apple-darwin13.4.0-cmpdylib', 'llvm-readelf', 'llvm-as', 'clang-query', 'scan-build', 'llvm-nm', 'llvm-lib', 'llvm-undname', 'x86_64-apple-darwin13.4.0-unwinddump', 'mpif77', 'x86_64-apple-darwin13.4.0-ObjectDump', 'llvm-ml', 'clang-offload-bundler', 'x86_64-apple-darwin13.4.0-inout', 'llvm-ar', 'find-all-symbols', 'clang-cl', 'llvm-dis', 'x86_64-apple-darwin13.4.0-makerelocs', 'llvm-size', 'mpichversion', 'x86_64-apple-darwin13.4.0-clang++', 'mpicc', 'dsymutil', 'obj2yaml', 'x86_64-apple-darwin13.4.0-bitcode_strip', 'x86_64-apple-darwin13.4.0-machocheck', 'clang-tidy', 'llvm-dlltool', 'llvm-readobj', 'llvm-cxxfilt', 'bugpoint', 'llvm-pdbutil', 'clang-offload-wrapper', 'clang-doc', 'llvm-ifs', 'parkill', 'lli', 'llvm-tblgen', 'mpicxx', 'clang-scan-deps', 'x86_64-apple-darwin13.4.0-dyldinfo', 'x86_64-apple-darwin13.4.0-ctf_insert', 'clang++', 'x86_64-apple-darwin13.4.0-mtor', 'sancov', 'x86_64-apple-darwin13.4.0-gfortran', 'x86_64-apple-darwin13.4.0-ld', 'llvm-dwarfdump', 'opt', 'ldid', 'clang-cpp', 'clang-11', 'clang-extdef-mapping', 'llvm-cat', 'git-clang-format', 'llvm-profdata', 'clang-apply-replacements', 'llvm-objcopy', 'llvm-extract', 'yaml2obj', 'sanstats', 'x86_64-apple-darwin13.4.0-otool', 'llvm-split', 'llvm-bcanalyzer', 'hydra_persist', 'mpiexec', 'hmaptool', 'llvm-stress', 'llvm-diff', 'x86_64-apple-darwin13.4.0-seg_addr_table', 'scan-view', 'diagtool', 'mpic++', 'mpifort', 'llvm-modextract', 'hydra_nameserver', 'llvm-gsymutil', 'llvm-strip', 'llvm-mt', 'x86_64-apple-darwin13.4.0-indr', 'llvm-ranlib', 'llvm-cxxmap'] Path provided by --with-executables-search-path ['win32fe.exe', 'win32feutils.dll'] Checking for program /Users/kongf/miniconda3/envs/testpetsc/bin/mpiicpc...not found Checking for program /Users/kongf/projects/moose6/petsc/lib/petsc/bin/win32fe/mpiicpc...not found Unable to find programs ['mpiicpc'] providing listing of each search directory to help debug Path provided in Python program ['x86_64-apple-darwin13.4.0-pagestuff', 'llvm-opt-report', 'llvm-lipo', 'modularize', 'llvm-cxxdump', 'mpif90', 'clang-change-namespace', 'verify-uselistorder', 'llvm-cvtres', 'x86_64-apple-darwin13.4.0-check_dylib', 'hydra_pmi_proxy', 'llvm-strings', 'clang-move', 'x86_64-apple-darwin13.4.0-ranlib', 'llvm-install-name-tool', 'clangd-xpc-test-client', 'clang', 'llvm-lto2', 'x86_64-apple-darwin13.4.0-nmedit', 'mpirun', 'llvm-cfi-verify', 'llvm-cov', 'x86_64-apple-darwin13.4.0-install_name_tool', 'llc', 'gfortran', 'llvm-link', 'llvm-symbolizer', 'llvm-objdump', 'x86_64-apple-darwin13.4.0-strings', 'clang-refactor', 'clang-rename', 'x86_64-apple-darwin13.4.0-mtoc', 'clangd', 'llvm-mca', 'set-xcode-analyzer', 'iconv', 'llvm-rc', '-clang++', 'mpiexec.hydra', 'clang-include-fixer', 'x86_64-apple-darwin13.4.0-libtool', 'x86_64-apple-darwin13.4.0-lipo', 'x86_64-apple-darwin13.4.0-vtool', 'llvm-addr2line', 'llvm-jitlink', 'x86_64-apple-darwin13.4.0-as', 'llvm-xray', 'x86_64-apple-darwin13.4.0-size', 'clang-format', 'llvm-rtdyld', 'x86_64-apple-darwin13.4.0-codesign_allocate', 'clang-check', 'llvm-lto', 'pp-trace', 'llvm-c-test', 'x86_64-apple-darwin13.4.0-seg_hack', 'x86_64-apple-darwin13.4.0-ar', 'c-index-test', 'llvm-dwp', 'x86_64-apple-darwin13.4.0-segedit', 'x86_64-apple-darwin13.4.0-redo_prebinding', 'x86_64-apple-darwin13.4.0-nm', 'x86_64-apple-darwin13.4.0-clang', 'llvm-reduce', 'llvm-elfabi', 'x86_64-apple-darwin13.4.0-checksyms', 'llvm-mc', 'mpivars', 'clang-reorder-fields', 'x86_64-apple-darwin13.4.0-strip', 'llvm-exegesis', 'x86_64-apple-darwin13.4.0-cmpdylib', 'llvm-readelf', 'llvm-as', 'clang-query', 'scan-build', 'llvm-nm', 'llvm-lib', 'llvm-undname', 'x86_64-apple-darwin13.4.0-unwinddump', 'mpif77', 'x86_64-apple-darwin13.4.0-ObjectDump', 'llvm-ml', 'clang-offload-bundler', 'x86_64-apple-darwin13.4.0-inout', 'llvm-ar', 'find-all-symbols', 'clang-cl', 'llvm-dis', 'x86_64-apple-darwin13.4.0-makerelocs', 'llvm-size', 'mpichversion', 'x86_64-apple-darwin13.4.0-clang++', 'mpicc', 'dsymutil', 'obj2yaml', 'x86_64-apple-darwin13.4.0-bitcode_strip', 'x86_64-apple-darwin13.4.0-machocheck', 'clang-tidy', 'llvm-dlltool', 'llvm-readobj', 'llvm-cxxfilt', 'bugpoint', 'llvm-pdbutil', 'clang-offload-wrapper', 'clang-doc', 'llvm-ifs', 'parkill', 'lli', 'llvm-tblgen', 'mpicxx', 'clang-scan-deps', 'x86_64-apple-darwin13.4.0-dyldinfo', 'x86_64-apple-darwin13.4.0-ctf_insert', 'clang++', 'x86_64-apple-darwin13.4.0-mtor', 'sancov', 'x86_64-apple-darwin13.4.0-gfortran', 'x86_64-apple-darwin13.4.0-ld', 'llvm-dwarfdump', 'opt', 'ldid', 'clang-cpp', 'clang-11', 'clang-extdef-mapping', 'llvm-cat', 'git-clang-format', 'llvm-profdata', 'clang-apply-replacements', 'llvm-objcopy', 'llvm-extract', 'yaml2obj', 'sanstats', 'x86_64-apple-darwin13.4.0-otool', 'llvm-split', 'llvm-bcanalyzer', 'hydra_persist', 'mpiexec', 'hmaptool', 'llvm-stress', 'llvm-diff', 'x86_64-apple-darwin13.4.0-seg_addr_table', 'scan-view', 'diagtool', 'mpic++', 'mpifort', 'llvm-modextract', 'hydra_nameserver', 'llvm-gsymutil', 'llvm-strip', 'llvm-mt', 'x86_64-apple-darwin13.4.0-indr', 'llvm-ranlib', 'llvm-cxxmap'] Path provided by --with-executables-search-path ['win32fe.exe', 'win32feutils.dll'] Checking for program /Users/kongf/miniconda3/envs/testpetsc/bin/mpiicpc...not found Checking for program /Users/kongf/projects/moose6/petsc/lib/petsc/bin/win32fe/mpiicpc...not found Unable to find programs ['mpiicpc'] providing listing of each search directory to help debug Path provided in Python program ['x86_64-apple-darwin13.4.0-pagestuff', 'llvm-opt-report', 'llvm-lipo', 'modularize', 'llvm-cxxdump', 'mpif90', 'clang-change-namespace', 'verify-uselistorder', 'llvm-cvtres', 'x86_64-apple-darwin13.4.0-check_dylib', 'hydra_pmi_proxy', 'llvm-strings', 'clang-move', 'x86_64-apple-darwin13.4.0-ranlib', 'llvm-install-name-tool', 'clangd-xpc-test-client', 'clang', 'llvm-lto2', 'x86_64-apple-darwin13.4.0-nmedit', 'mpirun', 'llvm-cfi-verify', 'llvm-cov', 'x86_64-apple-darwin13.4.0-install_name_tool', 'llc', 'gfortran', 'llvm-link', 'llvm-symbolizer', 'llvm-objdump', 'x86_64-apple-darwin13.4.0-strings', 'clang-refactor', 'clang-rename', 'x86_64-apple-darwin13.4.0-mtoc', 'clangd', 'llvm-mca', 'set-xcode-analyzer', 'iconv', 'llvm-rc', '-clang++', 'mpiexec.hydra', 'clang-include-fixer', 'x86_64-apple-darwin13.4.0-libtool', 'x86_64-apple-darwin13.4.0-lipo', 'x86_64-apple-darwin13.4.0-vtool', 'llvm-addr2line', 'llvm-jitlink', 'x86_64-apple-darwin13.4.0-as', 'llvm-xray', 'x86_64-apple-darwin13.4.0-size', 'clang-format', 'llvm-rtdyld', 'x86_64-apple-darwin13.4.0-codesign_allocate', 'clang-check', 'llvm-lto', 'pp-trace', 'llvm-c-test', 'x86_64-apple-darwin13.4.0-seg_hack', 'x86_64-apple-darwin13.4.0-ar', 'c-index-test', 'llvm-dwp', 'x86_64-apple-darwin13.4.0-segedit', 'x86_64-apple-darwin13.4.0-redo_prebinding', 'x86_64-apple-darwin13.4.0-nm', 'x86_64-apple-darwin13.4.0-clang', 'llvm-reduce', 'llvm-elfabi', 'x86_64-apple-darwin13.4.0-checksyms', 'llvm-mc', 'mpivars', 'clang-reorder-fields', 'x86_64-apple-darwin13.4.0-strip', 'llvm-exegesis', 'x86_64-apple-darwin13.4.0-cmpdylib', 'llvm-readelf', 'llvm-as', 'clang-query', 'scan-build', 'llvm-nm', 'llvm-lib', 'llvm-undname', 'x86_64-apple-darwin13.4.0-unwinddump', 'mpif77', 'x86_64-apple-darwin13.4.0-ObjectDump', 'llvm-ml', 'clang-offload-bundler', 'x86_64-apple-darwin13.4.0-inout', 'llvm-ar', 'find-all-symbols', 'clang-cl', 'llvm-dis', 'x86_64-apple-darwin13.4.0-makerelocs', 'llvm-size', 'mpichversion', 'x86_64-apple-darwin13.4.0-clang++', 'mpicc', 'dsymutil', 'obj2yaml', 'x86_64-apple-darwin13.4.0-bitcode_strip', 'x86_64-apple-darwin13.4.0-machocheck', 'clang-tidy', 'llvm-dlltool', 'llvm-readobj', 'llvm-cxxfilt', 'bugpoint', 'llvm-pdbutil', 'clang-offload-wrapper', 'clang-doc', 'llvm-ifs', 'parkill', 'lli', 'llvm-tblgen', 'mpicxx', 'clang-scan-deps', 'x86_64-apple-darwin13.4.0-dyldinfo', 'x86_64-apple-darwin13.4.0-ctf_insert', 'clang++', 'x86_64-apple-darwin13.4.0-mtor', 'sancov', 'x86_64-apple-darwin13.4.0-gfortran', 'x86_64-apple-darwin13.4.0-ld', 'llvm-dwarfdump', 'opt', 'ldid', 'clang-cpp', 'clang-11', 'clang-extdef-mapping', 'llvm-cat', 'git-clang-format', 'llvm-profdata', 'clang-apply-replacements', 'llvm-objcopy', 'llvm-extract', 'yaml2obj', 'sanstats', 'x86_64-apple-darwin13.4.0-otool', 'llvm-split', 'llvm-bcanalyzer', 'hydra_persist', 'mpiexec', 'hmaptool', 'llvm-stress', 'llvm-diff', 'x86_64-apple-darwin13.4.0-seg_addr_table', 'scan-view', 'diagtool', 'mpic++', 'mpifort', 'llvm-modextract', 'hydra_nameserver', 'llvm-gsymutil', 'llvm-strip', 'llvm-mt', 'x86_64-apple-darwin13.4.0-indr', 'llvm-ranlib', 'llvm-cxxmap'] Path provided by --with-executables-search-path ['win32fe.exe', 'win32feutils.dll'] Checking for program /Users/kongf/miniconda3/envs/testpetsc/bin/mpicxx...found Defined make macro "CXX" to "/Users/kongf/miniconda3/envs/testpetsc/bin/mpicxx" Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicxx -c -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o -I/var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicxx -c -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o -I/var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicxx -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicxx -c -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o -I/var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicxx -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o -lpetsc-ufod4vtr9mqHvKIQiVAm Possible ERROR while running linker: exit code 1 stderr: ld: library not found for -lpetsc-ufod4vtr9mqHvKIQiVAm clang-11: error: linker command failed with exit code 1 (use -v to see invocation) Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicxx -c -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o -I/var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicxx -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o Testing executable /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest to see if it can be run Executing: /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest Running Executable with threads to time it out at 60 Executing: /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicxx --version stdout: clang version 11.0.0 Target: x86_64-apple-darwin13.4.0 Thread model: posix InstalledDir: /Users/kongf/miniconda3/envs/testpetsc/bin ================================================================================ TEST checkCxxPreprocessor from config.setCompilers(/Users/kongf/projects/moose6/petsc/config/BuildSystem/config/setCompilers.py:1022) TESTING: checkCxxPreprocessor from config.setCompilers(config/BuildSystem/config/setCompilers.py:1022) Locate a functional Cxx preprocessor Checking for program /Users/kongf/miniconda3/envs/testpetsc/bin/mpicxx...found Defined make macro "CXXPP" to "/Users/kongf/miniconda3/envs/testpetsc/bin/mpicxx -E" Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicxx -E -I/var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.cc Preprocess stderr before filtering: : Preprocess stderr after filtering: : ================================================================================ TEST checkFortranCompiler from config.setCompilers(/Users/kongf/projects/moose6/petsc/config/BuildSystem/config/setCompilers.py:1123) TESTING: checkFortranCompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:1123) Locate a functional Fortran compiler Checking for program /Users/kongf/miniconda3/envs/testpetsc/bin/mpiifort...not found Checking for program /Users/kongf/projects/moose6/petsc/lib/petsc/bin/win32fe/mpiifort...not found Unable to find programs ['mpiifort'] providing listing of each search directory to help debug Path provided in Python program ['x86_64-apple-darwin13.4.0-pagestuff', 'llvm-opt-report', 'llvm-lipo', 'modularize', 'llvm-cxxdump', 'mpif90', 'clang-change-namespace', 'verify-uselistorder', 'llvm-cvtres', 'x86_64-apple-darwin13.4.0-check_dylib', 'hydra_pmi_proxy', 'llvm-strings', 'clang-move', 'x86_64-apple-darwin13.4.0-ranlib', 'llvm-install-name-tool', 'clangd-xpc-test-client', 'clang', 'llvm-lto2', 'x86_64-apple-darwin13.4.0-nmedit', 'mpirun', 'llvm-cfi-verify', 'llvm-cov', 'x86_64-apple-darwin13.4.0-install_name_tool', 'llc', 'gfortran', 'llvm-link', 'llvm-symbolizer', 'llvm-objdump', 'x86_64-apple-darwin13.4.0-strings', 'clang-refactor', 'clang-rename', 'x86_64-apple-darwin13.4.0-mtoc', 'clangd', 'llvm-mca', 'set-xcode-analyzer', 'iconv', 'llvm-rc', '-clang++', 'mpiexec.hydra', 'clang-include-fixer', 'x86_64-apple-darwin13.4.0-libtool', 'x86_64-apple-darwin13.4.0-lipo', 'x86_64-apple-darwin13.4.0-vtool', 'llvm-addr2line', 'llvm-jitlink', 'x86_64-apple-darwin13.4.0-as', 'llvm-xray', 'x86_64-apple-darwin13.4.0-size', 'clang-format', 'llvm-rtdyld', 'x86_64-apple-darwin13.4.0-codesign_allocate', 'clang-check', 'llvm-lto', 'pp-trace', 'llvm-c-test', 'x86_64-apple-darwin13.4.0-seg_hack', 'x86_64-apple-darwin13.4.0-ar', 'c-index-test', 'llvm-dwp', 'x86_64-apple-darwin13.4.0-segedit', 'x86_64-apple-darwin13.4.0-redo_prebinding', 'x86_64-apple-darwin13.4.0-nm', 'x86_64-apple-darwin13.4.0-clang', 'llvm-reduce', 'llvm-elfabi', 'x86_64-apple-darwin13.4.0-checksyms', 'llvm-mc', 'mpivars', 'clang-reorder-fields', 'x86_64-apple-darwin13.4.0-strip', 'llvm-exegesis', 'x86_64-apple-darwin13.4.0-cmpdylib', 'llvm-readelf', 'llvm-as', 'clang-query', 'scan-build', 'llvm-nm', 'llvm-lib', 'llvm-undname', 'x86_64-apple-darwin13.4.0-unwinddump', 'mpif77', 'x86_64-apple-darwin13.4.0-ObjectDump', 'llvm-ml', 'clang-offload-bundler', 'x86_64-apple-darwin13.4.0-inout', 'llvm-ar', 'find-all-symbols', 'clang-cl', 'llvm-dis', 'x86_64-apple-darwin13.4.0-makerelocs', 'llvm-size', 'mpichversion', 'x86_64-apple-darwin13.4.0-clang++', 'mpicc', 'dsymutil', 'obj2yaml', 'x86_64-apple-darwin13.4.0-bitcode_strip', 'x86_64-apple-darwin13.4.0-machocheck', 'clang-tidy', 'llvm-dlltool', 'llvm-readobj', 'llvm-cxxfilt', 'bugpoint', 'llvm-pdbutil', 'clang-offload-wrapper', 'clang-doc', 'llvm-ifs', 'parkill', 'lli', 'llvm-tblgen', 'mpicxx', 'clang-scan-deps', 'x86_64-apple-darwin13.4.0-dyldinfo', 'x86_64-apple-darwin13.4.0-ctf_insert', 'clang++', 'x86_64-apple-darwin13.4.0-mtor', 'sancov', 'x86_64-apple-darwin13.4.0-gfortran', 'x86_64-apple-darwin13.4.0-ld', 'llvm-dwarfdump', 'opt', 'ldid', 'clang-cpp', 'clang-11', 'clang-extdef-mapping', 'llvm-cat', 'git-clang-format', 'llvm-profdata', 'clang-apply-replacements', 'llvm-objcopy', 'llvm-extract', 'yaml2obj', 'sanstats', 'x86_64-apple-darwin13.4.0-otool', 'llvm-split', 'llvm-bcanalyzer', 'hydra_persist', 'mpiexec', 'hmaptool', 'llvm-stress', 'llvm-diff', 'x86_64-apple-darwin13.4.0-seg_addr_table', 'scan-view', 'diagtool', 'mpic++', 'mpifort', 'llvm-modextract', 'hydra_nameserver', 'llvm-gsymutil', 'llvm-strip', 'llvm-mt', 'x86_64-apple-darwin13.4.0-indr', 'llvm-ranlib', 'llvm-cxxmap'] Path provided by --with-executables-search-path ['win32fe.exe', 'win32feutils.dll'] Checking for program /Users/kongf/miniconda3/envs/testpetsc/bin/mpif90...found Defined make macro "FC" to "/Users/kongf/miniconda3/envs/testpetsc/bin/mpif90" Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpif90 -c -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o -I/var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.F90 Successful compile: Source: program main end Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpif90 -c -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o -I/var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.F90 Successful compile: Source: program main end Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpif90 -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpif90 -c -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o -I/var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.F90 Successful compile: Source: program main end Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpif90 -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o -lpetsc-ufod4vtr9mqHvKIQiVAm Possible ERROR while running linker: exit code 1 stderr: ld: library not found for -lpetsc-ufod4vtr9mqHvKIQiVAm collect2: error: ld returned 1 exit status Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpif90 -c -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o -I/var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.F90 Successful compile: Source: program main end Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpif90 -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o Testing executable /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest to see if it can be run Executing: /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest Running Executable with threads to time it out at 60 Executing: /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpif90 --version stdout: GNU Fortran (GCC) 9.3.0 Copyright (C) 2019 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. ================================================================================ TEST checkFortranPreprocessor from config.setCompilers(/Users/kongf/projects/moose6/petsc/config/BuildSystem/config/setCompilers.py:1160) TESTING: checkFortranPreprocessor from config.setCompilers(config/BuildSystem/config/setCompilers.py:1160) Locate a functional Fortran preprocessor Checking for program /Users/kongf/miniconda3/envs/testpetsc/bin/mpif90...found Defined make macro "FPP" to "/Users/kongf/miniconda3/envs/testpetsc/bin/mpif90 -E" Deleting "FPP" Checking for program /Users/kongf/miniconda3/envs/testpetsc/bin/mpif90...found Defined make macro "FPP" to "/Users/kongf/miniconda3/envs/testpetsc/bin/mpif90 --use cpp32" Deleting "FPP" ================================================================================ TEST checkFortranComments from config.setCompilers(/Users/kongf/projects/moose6/petsc/config/BuildSystem/config/setCompilers.py:1182) TESTING: checkFortranComments from config.setCompilers(config/BuildSystem/config/setCompilers.py:1182) Make sure fortran comment "!" works Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpif90 -c -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o -I/var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.F90 Successful compile: Source: program main ! comment end Fortran comments can use ! in column 1 ================================================================================ TEST checkLargeFileIO from config.setCompilers(/Users/kongf/projects/moose6/petsc/config/BuildSystem/config/setCompilers.py:1317) TESTING: checkLargeFileIO from config.setCompilers(config/BuildSystem/config/setCompilers.py:1317) ================================================================================ TEST checkArchiver from config.setCompilers(/Users/kongf/projects/moose6/petsc/config/BuildSystem/config/setCompilers.py:1416) TESTING: checkArchiver from config.setCompilers(config/BuildSystem/config/setCompilers.py:1416) Check that the archiver exists and can make a library usable by the compiler Running Executable WITHOUT threads to time it out Executing: ar -V Running Executable WITHOUT threads to time it out Executing: ar -V Defined make macro "FAST_AR_FLAGS" to "Scq" Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -c -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o -I/var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int foo(int a) { return a+1; } Checking for program /Users/kongf/miniconda3/envs/testpetsc/bin/ar...not found Checking for program /Users/kongf/miniconda3/condabin/ar...not found Checking for program /usr/local/bin/ar...not found Checking for program /usr/bin/ar...found Defined make macro "AR" to "/usr/bin/ar" Checking for program /Users/kongf/miniconda3/envs/testpetsc/bin/ranlib...not found Checking for program /Users/kongf/miniconda3/condabin/ranlib...not found Checking for program /usr/local/bin/ranlib...not found Checking for program /usr/bin/ranlib...found Defined make macro "RANLIB" to "/usr/bin/ranlib -c" Running Executable WITHOUT threads to time it out Executing: /usr/bin/ar cr /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/libconf1.a /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conf1.o Running Executable WITHOUT threads to time it out Executing: /usr/bin/ranlib -c /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/libconf1.a Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -c -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o -I/var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.c Possible ERROR while running compiler: stderr: /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.c:6:26: warning: if statement has empty body [-Wempty-body] int b = foo(1); if (b); ^ /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.c:6:26: note: put the semicolon on a separate line to silence this warning 1 warning generated. Source: #include "confdefs.h" #include "conffix.h" extern int foo(int); int main() { int b = foo(1); if (b); ; return 0; } Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o -L/var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers -lconf1 Defined make macro "AR_FLAGS" to "cr" Defined make macro "AR_LIB_SUFFIX" to "a" ================================================================================ TEST checkArchiverRecipeArgfile from config.setCompilers(/Users/kongf/projects/moose6/petsc/config/BuildSystem/config/setCompilers.py:1480) TESTING: checkArchiverRecipeArgfile from config.setCompilers(config/BuildSystem/config/setCompilers.py:1480) Checks if AR handles @ notation Running Executable WITHOUT threads to time it out Executing: /usr/bin/ar cr checkRecipeArgfile.a @checkRecipeArgfile.args Possible ERROR while running archiver: exit code 1 stderr: ar: @checkRecipeArgfile.args: No such file or directory ================================================================================ TEST checkSharedLinker from config.setCompilers(/Users/kongf/projects/moose6/petsc/config/BuildSystem/config/setCompilers.py:1560) TESTING: checkSharedLinker from config.setCompilers(config/BuildSystem/config/setCompilers.py:1560) Check that the linker can produce shared libraries Running Executable WITHOUT threads to time it out Executing: uname -s stdout: Darwin Checking shared linker /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc using flags ['-dynamiclib -single_module', '-undefined dynamic_lookup', '-multiply_defined suppress', '-no_compact_unwind'] Checking for program /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc...found Defined make macro "LD_SHARED" to "/Users/kongf/miniconda3/envs/testpetsc/bin/mpicc" Trying C compiler flag Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -c -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o -I/var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -c -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o -I/var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest -dynamiclib -single_module /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o Possible ERROR while running linker: stderr: ld: warning: -pie being ignored. It is only used when linking a main executable Rejecting C linker flag -dynamiclib -single_module due to ld: warning: -pie being ignored. It is only used when linking a main executable Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -c -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o -I/var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest -undefined dynamic_lookup /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o Valid C linker flag -undefined dynamic_lookup Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -c -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o -I/var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest -multiply_defined suppress /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o Valid C linker flag -multiply_defined suppress Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -c -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o -I/var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest -no_compact_unwind /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o Possible ERROR while running linker: exit code 1 stderr: clang-11: error: unknown argument: '-no_compact_unwind' Rejecting linker flag -no_compact_unwind due to nonzero status from link Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -c -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o -I/var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int (*fprintf_ptr)(FILE*,const char*,...) = fprintf; void foo(void){ fprintf_ptr(stdout,"hello"); return; } void bar(void){foo();} Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/libconftest.dylib -undefined dynamic_lookup -multiply_defined suppress /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -c -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o -I/var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int foo(void); int main() { int ret = foo(); if (ret) {} ; return 0; } Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o -L/var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers -lconftest Possible ERROR while running linker: exit code 1 stderr: ld: can't link with a main executable file '/var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/libconftest.dylib' for architecture x86_64 clang-11: error: linker command failed with exit code 1 (use -v to see invocation) Rejected C compiler flag because it was not compatible with shared linker /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc using flags ['-dynamiclib -single_module', '-undefined dynamic_lookup', '-multiply_defined suppress', '-no_compact_unwind'] Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc --help | head -n 20 stdout: OVERVIEW: clang LLVM compiler USAGE: clang-11 [options] file... OPTIONS: -### Print (but do not run) the commands to run for this compilation --analyzer-output Static analyzer report output format (html|plist|plist-multi-file|plist-html|sarif|text). --analyze Run the static analyzer -arcmt-migrate-emit-errors Emit ARC errors even if the migrator can fix them -arcmt-migrate-report-output Output path for the plist report -B Add to search path for binaries and object files used implicitly -CC Include comments from within macros in preprocessed output -cl-denorms-are-zero OpenCL only. Allow denormals to be flushed to zero. -cl-fast-relaxed-math OpenCL only. Sets -cl-finite-math-only and -cl-unsafe-math-optimizations, and defines __FAST_RELAXED_MATH__. -cl-finite-math-only OpenCL only. Allow floating-point optimizations that assume arguments and results are not NaNs or +-Inf. -cl-fp32-correctly-rounded-divide-sqrt OpenCL only. Specify that single precision floating-point divide and sqrt used in the program source are correctly rounded. Trying C compiler flag -PIC Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -c -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o -I/var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers -PIC /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.c Possible ERROR while running compiler: exit code 1 stderr: clang-11: error: unknown argument '-PIC'; did you mean '-fPIC'? Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejecting compiler flag -PIC due to nonzero status from link Rejecting compiler flag -PIC due to clang-11: error: unknown argument '-PIC'; did you mean '-fPIC'? PETSc Error: No output file produced Rejected C compiler flag -PIC because it was not compatible with shared linker /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc using flags ['-dynamiclib -single_module', '-undefined dynamic_lookup', '-multiply_defined suppress', '-no_compact_unwind'] Trying C compiler flag -fPIC Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -c -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o -I/var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers -fPIC /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Added C compiler flag -fPIC Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -c -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o -I/var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers -fPIC /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest -dynamiclib -single_module -fPIC /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o Possible ERROR while running linker: stderr: ld: warning: -pie being ignored. It is only used when linking a main executable Rejecting C linker flag -dynamiclib -single_module due to ld: warning: -pie being ignored. It is only used when linking a main executable Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -c -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o -I/var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers -fPIC /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest -undefined dynamic_lookup -fPIC /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o Valid C linker flag -undefined dynamic_lookup Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -c -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o -I/var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers -fPIC /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest -multiply_defined suppress -fPIC /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o Valid C linker flag -multiply_defined suppress Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -c -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o -I/var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers -fPIC /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest -no_compact_unwind -fPIC /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o Possible ERROR while running linker: exit code 1 stderr: clang-11: error: unknown argument: '-no_compact_unwind' Rejecting linker flag -no_compact_unwind due to nonzero status from link Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -c -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o -I/var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers -fPIC /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int (*fprintf_ptr)(FILE*,const char*,...) = fprintf; void foo(void){ fprintf_ptr(stdout,"hello"); return; } void bar(void){foo();} Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/libconftest.dylib -undefined dynamic_lookup -multiply_defined suppress -fPIC /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -c -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o -I/var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers -fPIC /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int foo(void); int main() { int ret = foo(); if (ret) {} ; return 0; } Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest -fPIC /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o -L/var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers -lconftest Possible ERROR while running linker: exit code 1 stderr: ld: can't link with a main executable file '/var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/libconftest.dylib' for architecture x86_64 clang-11: error: linker command failed with exit code 1 (use -v to see invocation) Rejected C compiler flag -fPIC because it was not compatible with shared linker /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc using flags ['-dynamiclib -single_module', '-undefined dynamic_lookup', '-multiply_defined suppress', '-no_compact_unwind'] Trying C compiler flag -KPIC Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -c -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o -I/var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers -KPIC /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.c Possible ERROR while running compiler: exit code 1 stderr: clang-11: error: unknown argument '-KPIC'; did you mean '-fPIC'? Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejecting compiler flag -KPIC due to nonzero status from link Rejecting compiler flag -KPIC due to clang-11: error: unknown argument '-KPIC'; did you mean '-fPIC'? PETSc Error: No output file produced Rejected C compiler flag -KPIC because it was not compatible with shared linker /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc using flags ['-dynamiclib -single_module', '-undefined dynamic_lookup', '-multiply_defined suppress', '-no_compact_unwind'] Trying C compiler flag -qpic Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -c -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o -I/var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers -qpic /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.c Possible ERROR while running compiler: exit code 1 stderr: clang-11: error: unknown argument '-qpic'; did you mean '-fpic'? Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejecting compiler flag -qpic due to nonzero status from link Rejecting compiler flag -qpic due to clang-11: error: unknown argument '-qpic'; did you mean '-fpic'? PETSc Error: No output file produced Rejected C compiler flag -qpic because it was not compatible with shared linker /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc using flags ['-dynamiclib -single_module', '-undefined dynamic_lookup', '-multiply_defined suppress', '-no_compact_unwind'] Deleting "LD_SHARED" Checking shared linker /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc using flags ['-shared'] Checking for program /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc...found Defined make macro "LD_SHARED" to "/Users/kongf/miniconda3/envs/testpetsc/bin/mpicc" Trying C compiler flag Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -c -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o -I/var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -c -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o -I/var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest -shared /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o Possible ERROR while running linker: stderr: ld: warning: -pie being ignored. It is only used when linking a main executable Rejecting C linker flag -shared due to ld: warning: -pie being ignored. It is only used when linking a main executable Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -c -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o -I/var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int (*fprintf_ptr)(FILE*,const char*,...) = fprintf; void foo(void){ fprintf_ptr(stdout,"hello"); return; } void bar(void){foo();} Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/libconftest.so /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o Possible ERROR while running linker: exit code 1 stderr: Undefined symbols for architecture x86_64: "_main", referenced from: implicit entry/start for main executable ld: symbol(s) not found for architecture x86_64 clang-11: error: linker command failed with exit code 1 (use -v to see invocation) Rejected C compiler flag because it was not compatible with shared linker /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc using flags ['-shared'] Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc --help | head -n 20 stdout: OVERVIEW: clang LLVM compiler USAGE: clang-11 [options] file... OPTIONS: -### Print (but do not run) the commands to run for this compilation --analyzer-output Static analyzer report output format (html|plist|plist-multi-file|plist-html|sarif|text). --analyze Run the static analyzer -arcmt-migrate-emit-errors Emit ARC errors even if the migrator can fix them -arcmt-migrate-report-output Output path for the plist report -B Add to search path for binaries and object files used implicitly -CC Include comments from within macros in preprocessed output -cl-denorms-are-zero OpenCL only. Allow denormals to be flushed to zero. -cl-fast-relaxed-math OpenCL only. Sets -cl-finite-math-only and -cl-unsafe-math-optimizations, and defines __FAST_RELAXED_MATH__. -cl-finite-math-only OpenCL only. Allow floating-point optimizations that assume arguments and results are not NaNs or +-Inf. -cl-fp32-correctly-rounded-divide-sqrt OpenCL only. Specify that single precision floating-point divide and sqrt used in the program source are correctly rounded. Trying C compiler flag -PIC Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -c -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o -I/var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers -PIC /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.c Possible ERROR while running compiler: exit code 1 stderr: clang-11: error: unknown argument '-PIC'; did you mean '-fPIC'? Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejecting compiler flag -PIC due to nonzero status from link Rejecting compiler flag -PIC due to clang-11: error: unknown argument '-PIC'; did you mean '-fPIC'? PETSc Error: No output file produced Rejected C compiler flag -PIC because it was not compatible with shared linker /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc using flags ['-shared'] Trying C compiler flag -fPIC Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -c -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o -I/var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers -fPIC /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Added C compiler flag -fPIC Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -c -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o -I/var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers -fPIC /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest -shared -fPIC /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o Possible ERROR while running linker: stderr: ld: warning: -pie being ignored. It is only used when linking a main executable Rejecting C linker flag -shared due to ld: warning: -pie being ignored. It is only used when linking a main executable Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -c -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o -I/var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers -fPIC /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int (*fprintf_ptr)(FILE*,const char*,...) = fprintf; void foo(void){ fprintf_ptr(stdout,"hello"); return; } void bar(void){foo();} Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/libconftest.so -fPIC /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o Possible ERROR while running linker: exit code 1 stderr: Undefined symbols for architecture x86_64: "_main", referenced from: implicit entry/start for main executable ld: symbol(s) not found for architecture x86_64 clang-11: error: linker command failed with exit code 1 (use -v to see invocation) Rejected C compiler flag -fPIC because it was not compatible with shared linker /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc using flags ['-shared'] Trying C compiler flag -KPIC Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -c -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o -I/var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers -KPIC /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.c Possible ERROR while running compiler: exit code 1 stderr: clang-11: error: unknown argument '-KPIC'; did you mean '-fPIC'? Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejecting compiler flag -KPIC due to nonzero status from link Rejecting compiler flag -KPIC due to clang-11: error: unknown argument '-KPIC'; did you mean '-fPIC'? PETSc Error: No output file produced Rejected C compiler flag -KPIC because it was not compatible with shared linker /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc using flags ['-shared'] Trying C compiler flag -qpic Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -c -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o -I/var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers -qpic /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.c Possible ERROR while running compiler: exit code 1 stderr: clang-11: error: unknown argument '-qpic'; did you mean '-fpic'? Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejecting compiler flag -qpic due to nonzero status from link Rejecting compiler flag -qpic due to clang-11: error: unknown argument '-qpic'; did you mean '-fpic'? PETSc Error: No output file produced Rejected C compiler flag -qpic because it was not compatible with shared linker /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc using flags ['-shared'] Deleting "LD_SHARED" Checking shared linker /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc using flags ['-dynamic'] Checking for program /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc...found Defined make macro "LD_SHARED" to "/Users/kongf/miniconda3/envs/testpetsc/bin/mpicc" Trying C compiler flag Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -c -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o -I/var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -c -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o -I/var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest -dynamic /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o Valid C linker flag -dynamic Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -c -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o -I/var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int (*fprintf_ptr)(FILE*,const char*,...) = fprintf; void foo(void){ fprintf_ptr(stdout,"hello"); return; } void bar(void){foo();} Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/libconftest.so -dynamic /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o Possible ERROR while running linker: exit code 1 stderr: Undefined symbols for architecture x86_64: "_main", referenced from: implicit entry/start for main executable ld: symbol(s) not found for architecture x86_64 clang-11: error: linker command failed with exit code 1 (use -v to see invocation) Rejected C compiler flag because it was not compatible with shared linker /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc using flags ['-dynamic'] Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc --help | head -n 20 stdout: OVERVIEW: clang LLVM compiler USAGE: clang-11 [options] file... OPTIONS: -### Print (but do not run) the commands to run for this compilation --analyzer-output Static analyzer report output format (html|plist|plist-multi-file|plist-html|sarif|text). --analyze Run the static analyzer -arcmt-migrate-emit-errors Emit ARC errors even if the migrator can fix them -arcmt-migrate-report-output Output path for the plist report -B Add to search path for binaries and object files used implicitly -CC Include comments from within macros in preprocessed output -cl-denorms-are-zero OpenCL only. Allow denormals to be flushed to zero. -cl-fast-relaxed-math OpenCL only. Sets -cl-finite-math-only and -cl-unsafe-math-optimizations, and defines __FAST_RELAXED_MATH__. -cl-finite-math-only OpenCL only. Allow floating-point optimizations that assume arguments and results are not NaNs or +-Inf. -cl-fp32-correctly-rounded-divide-sqrt OpenCL only. Specify that single precision floating-point divide and sqrt used in the program source are correctly rounded. Trying C compiler flag -PIC Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -c -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o -I/var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers -PIC /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.c Possible ERROR while running compiler: exit code 1 stderr: clang-11: error: unknown argument '-PIC'; did you mean '-fPIC'? Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejecting compiler flag -PIC due to nonzero status from link Rejecting compiler flag -PIC due to clang-11: error: unknown argument '-PIC'; did you mean '-fPIC'? PETSc Error: No output file produced Rejected C compiler flag -PIC because it was not compatible with shared linker /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc using flags ['-dynamic'] Trying C compiler flag -fPIC Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -c -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o -I/var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers -fPIC /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Added C compiler flag -fPIC Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -c -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o -I/var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers -fPIC /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest -dynamic -fPIC /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o Valid C linker flag -dynamic Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -c -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o -I/var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers -fPIC /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int (*fprintf_ptr)(FILE*,const char*,...) = fprintf; void foo(void){ fprintf_ptr(stdout,"hello"); return; } void bar(void){foo();} Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/libconftest.so -dynamic -fPIC /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o Possible ERROR while running linker: exit code 1 stderr: Undefined symbols for architecture x86_64: "_main", referenced from: implicit entry/start for main executable ld: symbol(s) not found for architecture x86_64 clang-11: error: linker command failed with exit code 1 (use -v to see invocation) Rejected C compiler flag -fPIC because it was not compatible with shared linker /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc using flags ['-dynamic'] Trying C compiler flag -KPIC Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -c -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o -I/var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers -KPIC /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.c Possible ERROR while running compiler: exit code 1 stderr: clang-11: error: unknown argument '-KPIC'; did you mean '-fPIC'? Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejecting compiler flag -KPIC due to nonzero status from link Rejecting compiler flag -KPIC due to clang-11: error: unknown argument '-KPIC'; did you mean '-fPIC'? PETSc Error: No output file produced Rejected C compiler flag -KPIC because it was not compatible with shared linker /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc using flags ['-dynamic'] Trying C compiler flag -qpic Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -c -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o -I/var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers -qpic /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.c Possible ERROR while running compiler: exit code 1 stderr: clang-11: error: unknown argument '-qpic'; did you mean '-fpic'? Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejecting compiler flag -qpic due to nonzero status from link Rejecting compiler flag -qpic due to clang-11: error: unknown argument '-qpic'; did you mean '-fpic'? PETSc Error: No output file produced Rejected C compiler flag -qpic because it was not compatible with shared linker /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc using flags ['-dynamic'] Deleting "LD_SHARED" Checking shared linker /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc using flags ['-qmkshrobj'] Checking for program /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc...found Defined make macro "LD_SHARED" to "/Users/kongf/miniconda3/envs/testpetsc/bin/mpicc" Trying C compiler flag Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -c -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o -I/var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -c -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o -I/var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest -qmkshrobj /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o Possible ERROR while running linker: exit code 1 stderr: clang-11: error: unknown argument: '-qmkshrobj' Rejecting linker flag -qmkshrobj due to nonzero status from link Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -c -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o -I/var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int (*fprintf_ptr)(FILE*,const char*,...) = fprintf; void foo(void){ fprintf_ptr(stdout,"hello"); return; } void bar(void){foo();} Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/libconftest.so /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o Possible ERROR while running linker: exit code 1 stderr: Undefined symbols for architecture x86_64: "_main", referenced from: implicit entry/start for main executable ld: symbol(s) not found for architecture x86_64 clang-11: error: linker command failed with exit code 1 (use -v to see invocation) Rejected C compiler flag because it was not compatible with shared linker /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc using flags ['-qmkshrobj'] Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc --help | head -n 20 stdout: OVERVIEW: clang LLVM compiler USAGE: clang-11 [options] file... OPTIONS: -### Print (but do not run) the commands to run for this compilation --analyzer-output Static analyzer report output format (html|plist|plist-multi-file|plist-html|sarif|text). --analyze Run the static analyzer -arcmt-migrate-emit-errors Emit ARC errors even if the migrator can fix them -arcmt-migrate-report-output Output path for the plist report -B Add to search path for binaries and object files used implicitly -CC Include comments from within macros in preprocessed output -cl-denorms-are-zero OpenCL only. Allow denormals to be flushed to zero. -cl-fast-relaxed-math OpenCL only. Sets -cl-finite-math-only and -cl-unsafe-math-optimizations, and defines __FAST_RELAXED_MATH__. -cl-finite-math-only OpenCL only. Allow floating-point optimizations that assume arguments and results are not NaNs or +-Inf. -cl-fp32-correctly-rounded-divide-sqrt OpenCL only. Specify that single precision floating-point divide and sqrt used in the program source are correctly rounded. Trying C compiler flag -PIC Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -c -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o -I/var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers -PIC /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.c Possible ERROR while running compiler: exit code 1 stderr: clang-11: error: unknown argument '-PIC'; did you mean '-fPIC'? Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejecting compiler flag -PIC due to nonzero status from link Rejecting compiler flag -PIC due to clang-11: error: unknown argument '-PIC'; did you mean '-fPIC'? PETSc Error: No output file produced Rejected C compiler flag -PIC because it was not compatible with shared linker /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc using flags ['-qmkshrobj'] Trying C compiler flag -fPIC Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -c -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o -I/var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers -fPIC /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Added C compiler flag -fPIC Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -c -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o -I/var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers -fPIC /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest -qmkshrobj -fPIC /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o Possible ERROR while running linker: exit code 1 stderr: clang-11: error: unknown argument: '-qmkshrobj' Rejecting linker flag -qmkshrobj due to nonzero status from link Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -c -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o -I/var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers -fPIC /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int (*fprintf_ptr)(FILE*,const char*,...) = fprintf; void foo(void){ fprintf_ptr(stdout,"hello"); return; } void bar(void){foo();} Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/libconftest.so -fPIC /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o Possible ERROR while running linker: exit code 1 stderr: Undefined symbols for architecture x86_64: "_main", referenced from: implicit entry/start for main executable ld: symbol(s) not found for architecture x86_64 clang-11: error: linker command failed with exit code 1 (use -v to see invocation) Rejected C compiler flag -fPIC because it was not compatible with shared linker /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc using flags ['-qmkshrobj'] Trying C compiler flag -KPIC Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -c -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o -I/var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers -KPIC /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.c Possible ERROR while running compiler: exit code 1 stderr: clang-11: error: unknown argument '-KPIC'; did you mean '-fPIC'? Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejecting compiler flag -KPIC due to nonzero status from link Rejecting compiler flag -KPIC due to clang-11: error: unknown argument '-KPIC'; did you mean '-fPIC'? PETSc Error: No output file produced Rejected C compiler flag -KPIC because it was not compatible with shared linker /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc using flags ['-qmkshrobj'] Trying C compiler flag -qpic Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -c -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o -I/var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers -qpic /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.c Possible ERROR while running compiler: exit code 1 stderr: clang-11: error: unknown argument '-qpic'; did you mean '-fpic'? Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejecting compiler flag -qpic due to nonzero status from link Rejecting compiler flag -qpic due to clang-11: error: unknown argument '-qpic'; did you mean '-fpic'? PETSc Error: No output file produced Rejected C compiler flag -qpic because it was not compatible with shared linker /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc using flags ['-qmkshrobj'] Deleting "LD_SHARED" Checking shared linker /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc using flags ['-shared'] Checking for program /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc...found Defined make macro "LD_SHARED" to "/Users/kongf/miniconda3/envs/testpetsc/bin/mpicc" Trying C compiler flag Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -c -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o -I/var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -c -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o -I/var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest -shared /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o Possible ERROR while running linker: stderr: ld: warning: -pie being ignored. It is only used when linking a main executable Rejecting C linker flag -shared due to ld: warning: -pie being ignored. It is only used when linking a main executable Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -c -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o -I/var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.c Possible ERROR while running compiler: exit code 1 stderr: /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.c:5:29: error: expected function body after function declarator void __declspec(dllexport) foo(void){ ^ 1 error generated. Source: #include "confdefs.h" #include "conffix.h" #include int (*fprintf_ptr)(FILE*,const char*,...) = fprintf; void __declspec(dllexport) foo(void){ fprintf_ptr(stdout,"hello"); return; } void bar(void){foo();} Compile failed inside link Rejected C compiler flag because it was not compatible with shared linker /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc using flags ['-shared'] Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc --help | head -n 20 stdout: OVERVIEW: clang LLVM compiler USAGE: clang-11 [options] file... OPTIONS: -### Print (but do not run) the commands to run for this compilation --analyzer-output Static analyzer report output format (html|plist|plist-multi-file|plist-html|sarif|text). --analyze Run the static analyzer -arcmt-migrate-emit-errors Emit ARC errors even if the migrator can fix them -arcmt-migrate-report-output Output path for the plist report -B Add to search path for binaries and object files used implicitly -CC Include comments from within macros in preprocessed output -cl-denorms-are-zero OpenCL only. Allow denormals to be flushed to zero. -cl-fast-relaxed-math OpenCL only. Sets -cl-finite-math-only and -cl-unsafe-math-optimizations, and defines __FAST_RELAXED_MATH__. -cl-finite-math-only OpenCL only. Allow floating-point optimizations that assume arguments and results are not NaNs or +-Inf. -cl-fp32-correctly-rounded-divide-sqrt OpenCL only. Specify that single precision floating-point divide and sqrt used in the program source are correctly rounded. Trying C compiler flag -PIC Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -c -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o -I/var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers -PIC /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.c Possible ERROR while running compiler: exit code 1 stderr: clang-11: error: unknown argument '-PIC'; did you mean '-fPIC'? Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejecting compiler flag -PIC due to nonzero status from link Rejecting compiler flag -PIC due to clang-11: error: unknown argument '-PIC'; did you mean '-fPIC'? PETSc Error: No output file produced Rejected C compiler flag -PIC because it was not compatible with shared linker /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc using flags ['-shared'] Trying C compiler flag -fPIC Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -c -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o -I/var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers -fPIC /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Added C compiler flag -fPIC Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -c -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o -I/var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers -fPIC /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest -shared -fPIC /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o Possible ERROR while running linker: stderr: ld: warning: -pie being ignored. It is only used when linking a main executable Rejecting C linker flag -shared due to ld: warning: -pie being ignored. It is only used when linking a main executable Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -c -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o -I/var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers -fPIC /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.c Possible ERROR while running compiler: exit code 1 stderr: /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.c:5:29: error: expected function body after function declarator void __declspec(dllexport) foo(void){ ^ 1 error generated. Source: #include "confdefs.h" #include "conffix.h" #include int (*fprintf_ptr)(FILE*,const char*,...) = fprintf; void __declspec(dllexport) foo(void){ fprintf_ptr(stdout,"hello"); return; } void bar(void){foo();} Compile failed inside link Rejected C compiler flag -fPIC because it was not compatible with shared linker /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc using flags ['-shared'] Trying C compiler flag -KPIC Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -c -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o -I/var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers -KPIC /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.c Possible ERROR while running compiler: exit code 1 stderr: clang-11: error: unknown argument '-KPIC'; did you mean '-fPIC'? Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejecting compiler flag -KPIC due to nonzero status from link Rejecting compiler flag -KPIC due to clang-11: error: unknown argument '-KPIC'; did you mean '-fPIC'? PETSc Error: No output file produced Rejected C compiler flag -KPIC because it was not compatible with shared linker /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc using flags ['-shared'] Trying C compiler flag -qpic Running Executable WITHOUT threads to time it out Executing: /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc -c -o /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.o -I/var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers -qpic /var/folders/tv/ljnkj46x3nq45cp9tbkc000c0000gn/T/petsc-u2awqpgk/config.setCompilers/conftest.c Possible ERROR while running compiler: exit code 1 stderr: clang-11: error: unknown argument '-qpic'; did you mean '-fpic'? Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejecting compiler flag -qpic due to nonzero status from link Rejecting compiler flag -qpic due to clang-11: error: unknown argument '-qpic'; did you mean '-fpic'? PETSc Error: No output file produced Rejected C compiler flag -qpic because it was not compatible with shared linker /Users/kongf/miniconda3/envs/testpetsc/bin/mpicc using flags ['-shared'] Deleting "LD_SHARED" Running Executable WITHOUT threads to time it out Executing: uname -s stdout: Darwin ******************************************************************************* UNABLE to CONFIGURE with GIVEN OPTIONS (see configure.log for details): ------------------------------------------------------------------------------- Exhausted all shared linker guesses. Could not determine how to create a shared library! ******************************************************************************* File "/Users/kongf/projects/moose6/petsc/config/configure.py", line 456, in petsc_configure framework.configure(out = sys.stdout) File "/Users/kongf/projects/moose6/petsc/config/BuildSystem/config/framework.py", line 1253, in configure self.processChildren() File "/Users/kongf/projects/moose6/petsc/config/BuildSystem/config/framework.py", line 1242, in processChildren self.serialEvaluation(self.childGraph) File "/Users/kongf/projects/moose6/petsc/config/BuildSystem/config/framework.py", line 1217, in serialEvaluation child.configure() File "/Users/kongf/projects/moose6/petsc/config/BuildSystem/config/setCompilers.py", line 1994, in configure self.executeTest(self.checkSharedLinker) File "/Users/kongf/projects/moose6/petsc/config/BuildSystem/config/base.py", line 140, in executeTest ret = test(*args,**kargs) File "/Users/kongf/projects/moose6/petsc/config/BuildSystem/config/setCompilers.py", line 1564, in checkSharedLinker for linker, flags, ext in self.generateSharedLinkerGuesses(): File "/Users/kongf/projects/moose6/petsc/config/BuildSystem/config/setCompilers.py", line 1558, in generateSharedLinkerGuesses raise RuntimeError('Exhausted all shared linker guesses. Could not determine how to create a shared library!') ================================================================================ Finishing configure run at Wed, 10 Mar 2021 12:39:22 -0700 ================================================================================