================================================================================ ================================================================================ Starting configure run at Thu, 16 Jul 2020 12:57:42 -0400 Configure Options: --configModules=PETSc.Configure --optionsModule=config.compilerOptions --with-mpi-dir=/usr/local/Cellar/mpich/3.3.2_1 COPTFLAGS="-g -O0 -fopenmp" CXXOPTdFLAGS="-g -O0 -fopenmp" FOPTFLAGS="-g -O0" --with-fc=0 --with-clanguage=cxx --download-metis=1 --download-parmetis=1 --download-ml=1 --download-p4est=1 --with-zlib=1 --with-cxx-dialect=C++11 --download-triangle=1 --download-hdf5=1 -with-cuda=0 --with-x=0 --with-debugging=1 PETSC_ARCH=arch-macosx-gnu-g-omp --with-64-bit-indices=0 --with-openmp=1 Working directory: /Users/markadams/Codes/petsc Machine platform: ('Darwin', 'MarksMac-302.local', '19.5.0', 'Darwin Kernel Version 19.5.0: Tue May 26 20:41:44 PDT 2020; root:xnu-6153.121.2~2/RELEASE_X86_64', 'x86_64', 'i386') Python version: 2.7.16 (default, Apr 17 2020, 18:29:03) [GCC 4.2.1 Compatible Apple LLVM 11.0.3 (clang-1103.0.29.20) (-macos10.15-objc- ================================================================================ ================================================================================ TEST configureExternalPackagesDir from config.framework(/Users/markadams/Codes/petsc/config/BuildSystem/config/framework.py:929) TESTING: configureExternalPackagesDir from config.framework(config/BuildSystem/config/framework.py:929) ================================================================================ TEST configureDebuggers from config.utilities.debuggers(/Users/markadams/Codes/petsc/config/BuildSystem/config/utilities/debuggers.py:21) TESTING: configureDebuggers from config.utilities.debuggers(config/BuildSystem/config/utilities/debuggers.py:21) Find a default debugger and determine its arguments Running Executable WITHOUT threads to time it out Executing: uname -s stdout: Darwin Checking for program /usr/local/opt/llvm/bin/lldb...found Defined make macro "LLDB" to "/usr/local/opt/llvm/bin/lldb" Defined "USE_DEBUGGER" to ""lldb"" Running Executable WITHOUT threads to time it out Executing: uname -s stdout: Darwin Checking for program /usr/local/opt/llvm/bin/dsymutil...found Defined make macro "DSYMUTIL" to "/usr/local/opt/llvm/bin/dsymutil" Defined make macro "DSYMUTIL" to "/usr/local/opt/llvm/bin/dsymutil" Running Executable WITHOUT threads to time it out Executing: uname -s stdout: Darwin Defined "DO_NOT_SWAP_CHILD_FOR_DEBUGGER" to "1" child config.utilities.debuggers 0.021583 ================================================================================ TEST configureDirectories from PETSc.options.petscdir(/Users/markadams/Codes/petsc/config/PETSc/options/petscdir.py:23) TESTING: configureDirectories from PETSc.options.petscdir(config/PETSc/options/petscdir.py:23) Checks PETSC_DIR and sets if not set Version Information: #define PETSC_VERSION_RELEASE 0 #define PETSC_VERSION_MAJOR 3 #define PETSC_VERSION_MINOR 13 #define PETSC_VERSION_SUBMINOR 3 #define PETSC_VERSION_PATCH 0 #define PETSC_VERSION_DATE "unknown" #define PETSC_VERSION_GIT "unknown" #define PETSC_VERSION_DATE_GIT "unknown" #define PETSC_VERSION_EQ(MAJOR,MINOR,SUBMINOR) \ #define PETSC_VERSION_ PETSC_VERSION_EQ #define PETSC_VERSION_LT(MAJOR,MINOR,SUBMINOR) \ #define PETSC_VERSION_LE(MAJOR,MINOR,SUBMINOR) \ #define PETSC_VERSION_GT(MAJOR,MINOR,SUBMINOR) \ #define PETSC_VERSION_GE(MAJOR,MINOR,SUBMINOR) \ child PETSc.options.petscdir 0.002170 ================================================================================ TEST getDatafilespath from PETSc.options.dataFilesPath(/Users/markadams/Codes/petsc/config/PETSc/options/dataFilesPath.py:29) TESTING: getDatafilespath from PETSc.options.dataFilesPath(config/PETSc/options/dataFilesPath.py:29) Checks what DATAFILESPATH should be child PETSc.options.dataFilesPath 0.000259 ================================================================================ TEST configureGit from config.sourceControl(/Users/markadams/Codes/petsc/config/BuildSystem/config/sourceControl.py:24) TESTING: configureGit from config.sourceControl(config/BuildSystem/config/sourceControl.py:24) Find the Git executable Checking for program /usr/local/opt/llvm/bin/git...not found Checking for program /opt/anaconda2/bin/git...not found Checking for program /opt/anaconda2/bin/git...not found Checking for program /Users/markadams/opt/miniconda2/bin/git...not found Checking for program /opt/miniconda2/bin/git...not found Checking for program /Users/markadams/opt/miniconda3/bin/git...not found Checking for program /usr/local/opt/texinfo/bin/git...not found Checking for program /Users/markadams/homebrew/sbin/git...not found Checking for program /Users/markadams/homebrew/bin/git...not found Checking for program /Users/markadams/homebrew/bin/git...not found Checking for program /usr/local/bin/git...not found Checking for program /usr/local/bin/git...not found Checking for program /usr/bin/git...found Defined make macro "GIT" to "git" Running Executable WITHOUT threads to time it out Executing: git --version stdout: git version 2.24.3 (Apple Git-128) ================================================================================ TEST configureMercurial from config.sourceControl(/Users/markadams/Codes/petsc/config/BuildSystem/config/sourceControl.py:35) TESTING: configureMercurial from config.sourceControl(config/BuildSystem/config/sourceControl.py:35) Find the Mercurial executable Checking for program /usr/local/opt/llvm/bin/hg...not found Checking for program /opt/anaconda2/bin/hg...not found Checking for program /opt/anaconda2/bin/hg...not found Checking for program /Users/markadams/opt/miniconda2/bin/hg...not found Checking for program /opt/miniconda2/bin/hg...not found Checking for program /Users/markadams/opt/miniconda3/bin/hg...not found Checking for program /usr/local/opt/texinfo/bin/hg...not found Checking for program /Users/markadams/homebrew/sbin/hg...not found Checking for program /Users/markadams/homebrew/bin/hg...not found Checking for program /Users/markadams/homebrew/bin/hg...not found Checking for program /usr/local/bin/hg...not found Checking for program /usr/local/bin/hg...not found Checking for program /usr/bin/hg...not found Checking for program /bin/hg...not found Checking for program /usr/sbin/hg...not found Checking for program /sbin/hg...not found Checking for program /Library/TeX/texbin/hg...not found Checking for program /opt/X11/bin/hg...not found Checking for program /Library/Apple/usr/bin/hg...not found Checking for program /usr/local/bin/hg...not found Checking for program hg...not found Checking for program /Users/markadams/Codes/petsc/lib/petsc/bin/win32fe/hg...not found Unable to find programs ['hg'] providing listing of each search directory to help debug Path provided in Python program Path provided by default path ['llvm-opt-report', 'llvm-lipo', 'modularize', 'llvm-cxxdump', 'clang-change-namespace', 'verify-uselistorder', 'llvm-cvtres', 'llvm-strings', 'clang-move', 'llvm-install-name-tool', 'clangd-xpc-test-client', 'llvm-config', 'clang', 'llvm-lto2', 'llvm-cfi-verify', 'llvm-cov', 'lld', 'llc', 'llvm-link', 'not', 'llvm-symbolizer', 'llvm-objdump', 'clang-refactor', 'clang-rename', 'clangd', 'llvm-mca', 'set-xcode-analyzer', 'llvm-rc', 'clang-include-fixer', 'llvm-addr2line', 'llvm-jitlink', 'llvm-xray', 'clang-format', 'lldb', 'llvm-rtdyld', 'FileCheck', 'clang-check', 'llvm-lto', 'pp-trace', 'llvm-c-test', 'c-index-test', 'llvm-dwp', 'count', 'llvm-reduce', 'llvm-elfabi', 'llvm-mc', 'clang-reorder-fields', 'llvm-exegesis', 'llvm-readelf', 'ld.lld', 'llvm-as', 'clang-query', 'scan-build', 'llvm-nm', 'llvm-lib', 'llvm-undname', 'clang-offload-bundler', 'lldb-argdumper', 'lldb-server', 'llvm-ar', 'find-all-symbols', 'clang-cl', 'llvm-dis', 'llvm-size', 'dsymutil', 'obj2yaml', 'clang-tidy', 'wasm-ld', 'llvm-dlltool', 'llvm-readobj', 'llvm-cxxfilt', 'bugpoint', 'llvm-pdbutil', 'clang-offload-wrapper', 'clang-doc', 'llvm-ifs', 'lli', 'llvm-PerfectShuffle', 'llvm-tblgen', 'lli-child-target', 'clang-scan-deps', 'clang++', 'sancov', 'darwin-debug', 'llvm-dwarfdump', 'opt', 'clang-cpp', 'clang-extdef-mapping', 'yaml-bench', 'llvm-cat', 'git-clang-format', 'llvm-profdata', 'clang-apply-replacements', 'llvm-objcopy', 'llvm-extract', 'yaml2obj', 'sanstats', 'llvm-split', 'llvm-bcanalyzer', 'clang-10', 'lldb-instr', 'hmaptool', 'llvm-stress', 'llvm-diff', 'scan-view', 'diagtool', 'llvm-modextract', 'clang-import-test', 'lld-link', 'llvm-strip', 'llvm-mt', 'ld64.lld', 'lldb-vscode', 'llvm-ranlib', 'llvm-cxxmap'] Warning accessing /opt/anaconda2/bin gives errors: [Errno 2] No such file or directory: '/opt/anaconda2/bin' Warning accessing /opt/anaconda2/bin gives errors: [Errno 2] No such file or directory: '/opt/anaconda2/bin' Warning accessing /Users/markadams/opt/miniconda2/bin gives errors: [Errno 2] No such file or directory: '/Users/markadams/opt/miniconda2/bin' Warning accessing /opt/miniconda2/bin gives errors: [Errno 2] No such file or directory: '/opt/miniconda2/bin' Warning accessing /Users/markadams/opt/miniconda3/bin gives errors: [Errno 2] No such file or directory: '/Users/markadams/opt/miniconda3/bin' ['texi2pdf', 'pod2texi', 'texindex', 'info', 'texi2dvi', 'pdftexi2dvi', 'texi2any', 'makeinfo', 'install-info'] Warning accessing /Users/markadams/homebrew/sbin gives errors: [Errno 2] No such file or directory: '/Users/markadams/homebrew/sbin' Warning accessing /Users/markadams/homebrew/bin gives errors: [Errno 2] No such file or directory: '/Users/markadams/homebrew/bin' Warning accessing /Users/markadams/homebrew/bin gives errors: [Errno 2] No such file or directory: '/Users/markadams/homebrew/bin' ['ndmetis', 'ppmtouil', 'pstoedit', 'lto-dump-10', 'lzmainfo', 'xwdtopnm', 'ppmtorgb3', 'pamtohdiff', 'pbmtoppa', 'ccmake', 'ppmtoyuvsplit', 'msgconv', 'pbmtonokia', 'leaftoppm', 'event_rpcgen.py', 'pnminvert', 'pkg-config', 'pbmpage', 'pnmrotate', 'bdftogd', 'hwloc-compress-dir', 'gen-enc-table', 'pgmslice', 'octave-cli-5.2.0', 'ppmshadow', 'anytopnm', 'asciitopgm', 'ppmtoppm', 'pgmkernel', 'tifftopnm', 'fig2ps2tex', 'msggrep', 'pbmtoescp2', 'ppmcie', 'libtool', 'ddbugtopbm', 'pgmhist', 'rawtoppm', 'webpng', 'sndfile-cmp', 'pnmcut', 'aclocal', 'pnmhistmap', 'palmtopnm', 'pamseq', 'glpsol', 'autopoint', 'mpif90', 'fitstopnm', 'pampick', 'hwloc-bind', 'pngtopam', 'pambrighten', 'ppmmix', 'tificc', 'pip3.8', 'pnmtofits', 'pamrecolor', 'pgmmake', 'pamaltsat', 'x86_64-apple-darwin19-gcc-ranlib-10', 'pbmtog3', 'gcc-ranlib-10', 'hydra_pmi_proxy', 'pbmtomrf', 'pamtilt', 'automake-1.14', 'pbmtodjvurle', 'octave-cli', 'h5copy', 'xzdec', 'luac5.3', 'tiffsplit', 'pambayer', 'ppmforge', 'font2c', 'pnmtosgi', 'ppmtojpeg', 'wheel3', 'mtvtoppm', 'pamstretch', 'h52gif', 'fax2tiff', 'pamfunc', 'pcdovtoppm', 'linkicc', 'rst2xetex.py', 'msgcomm', 'gdb', 'pnmnoraw', 'h5perf_serial', 'fc-list', 'pnmpaste', 'pamsharpness', 'opj_compress', 'GraphicsMagickWand-config', 'ppmtoilbm', 'mpirun', 'gs-noX11', 'heif-enc', 'lispmtopgm', 'gtester', 'ppmrainbow', 'bjoentegaard', 'pbmtopgm', 'pnmtops', 'pbmtocis', 'autoscan', 'callgrind_control', 'gd2togif', '411toppm', 'gfortran', 'opj_dump', '2to3', 'pbmtoxbm', 'fftwl-wisdom', 'lua-5.3', 'mkoctfile-5.2.0', 'ppmfade', 'pamperspective', 'python3', 'pnmtoddif', 'wish8.6', 'pamfind', 'plot', 'png-fix-itxt', 'gcov-dump-10', 'pamslice', 'rst2latex.py', 'gfortran-10', 'c++-10', 'pamsharpmap', 'ppmtotga', 'pbmtowbmp', 'pgmenhance', 'gnuplot', 'luac', 'jbigtopnm', 'pgmtosbig', 'cmake', 'enc265', 'ppmflash', 'opj_decompress', 'tiffdump', 'pamaddnoise', 'h5unjam', 'pbmtogem', 'ppmspread', 'ppmddumpfont', 'fc-pattern', 'mpiexec.hydra', 'ilbmtoppm', 'pbmtox10bm', 'pnmfile', 'aclocal-1.14', 'unxz', 'ppmdmkfont', 'qvoronoi', 'pbmtolps', 'hwloc-distrib', 'tiff2bw', 'cg_merge', 'pammasksharpen', 'jiv', 'freetype-config', 'pip3', 'exrmultipart', 'pgmnorm', 'gr2fonttest', 'sunicontopnm', 'exrmultiview', 'gdbus-codegen', 'fc-validate', 'pamtopdbimg', 'cjpeg', 'teacup', 'autom4te', 'ppmchange', 'h5stat', 'cmpfillin', 'easy_install-3.8', 'escp2topbm', 'jpegtran', 'h5ls', 'exrmaketiled', 'clang-format', 'lstopo', 'pbmminkowski', 'libpng16-config', 'heif-info', 'yuvtoppm', 'xzegrep', 'gsettings', 'VBoxManage', 'pngfix', 'zeisstopnm', 'vagrant', 'xmlto', 'glib-compile-schemas', 'webpmux', 'pamscale', 'pgmtopgm', 'fc-query', 'tiffcmp', 'pnmtopng', 'cameratopam', 'pnmtojpeg', 'gcov-tool-10', 'luac-5.3', 'yuvsplittoppm', 'rasttopnm', 'exr2aces', 'ppmtopjxl', 'tiff2pdf', 'pbmtoicon', 'pbmreduce', 'ppmdist', 'pamsistoaglyph', 'wish', 'pbmtozinc', 'unlzma', 'pgmtexture', 'pbmto4425', 'ppmdim', 'pbmpscale', 'ppmtopuzz', 'ybmtopbm', 'pbmtomgr', 'pbmtopi3', 'hdifftopam', 'pamexec', 'ppmtowinicon', 'pktopbm', 'pgmtolispm', 'x86_64-apple-darwin19-c++-10', 'fiascotopnm', 'pamdepth', 'update-mime-database', 'VBoxHeadless', 'hwloc-calc', 'gif2h5', 'pnmarith', 'pjtoppm', 'xzfgrep', 'sirtopnm', 'vgdb', 'webpinfo', 'gdtopng', 'hwloc-info', 'h5jam', 'libpng-config', 'pnmscalefixed', 'gdbm_dump', 'pbmtomda', 'fltk-config', 'pamtompfont', 'mkoctfile', 'gobject-query', 'brushtopbm', 'pnmsmooth', 'pnmenlarge', 'brew', 'pnmtopclxl', 'fstopgm', 'pgmdeshadow', 'plotfont', 'graph', 'ppmtopi1', 'ppmdcfont', 'h5cc', 'bmptopnm', 'pnminterp', 'g3topbm', 'cpp-10', 'pamgetcolor', 'pbmtoascii', 'pnmcrop', 'pnmtopalm', 'pamsplit', 'pbmlife', 'pamundice', 'xpmtoppm', 'rletopnm', 'pngtogd2', 'x86_64-apple-darwin19-gcc-ar-10', 'mpivars', 'msgen', 'sgitopnm', 'pbmtoepsi', 'sldtoppm', 'tclsh8.6', 'sndfile-metadata-set', 'pnmflip', 'eyuvtoppm', 'autoupdate', 'gs-X11', 'python3.8', 'pnmtosir', 'pambackground', 'rst2odt_prepstyles.py', 'manweb', 'pdbimgtopam', 'jpeg2ktopam', 'pnmtotiff', 'pamshadedrelief', 'mdatopbm', 'ppmtoeyuv', 'ppmntsc', 'djpeg', 'gs-X11-Yosemite', 'picttoppm', 'giftopnm', 'sndfile-salvage', 'pnmindex', 'pnmshear', 'pnmtile', 'annotate', 'msgmerge', 'pamtopnm', 'fftwf-wisdom', 'pamunlookup', 'pamlevels', 'tiffcrop', 'gs-noX11-Yosemite', 'neotoppm', 'wbmptopbm', 'pbmtobbnbg', 'h5mkgrp', 'pamrgbatopng', 'libtoolize', 'rlatopam', 'pgmramp', 'm2gmetis', 'pnmcomp', 'pamtooctaveimg', 'gio-querymodules', 'mpif77', 'pamtohtmltbl', 'pcdindex', 'ppmtoneo', 'fribidi', 'ppmtosixel', 'pnmtorast', 'h5format_convert', 'pnmhisteq', 'gemtopbm', 'idle3', 'cg_diff', 'mpmetis', 'gdcmpgif', 'envsubst', 'xz', 'ppmdither', 'pi1toppm', 'pampaintspill', 'spctoppm', 'cairo-trace', 'VirtualBox', 'x86_64-apple-darwin19-gcc-nm-10', 'pbmtomatrixorbital', 'gdparttopng', 'mgrtopbm', 'h5repack', 'fluid', 'ximtoppm', 'glib-compile-resources', 'pamtogif', 'ppmtoacad', 'vboxwebsrv', 'msginit', 'mongoose', 'rbox', 'lua', 'pamdice', 'macptopbm', 'pamtosvg', 'pbmtogo', 'VBoxDTrace', 'ppmtolj', 'ppmtoxpm', 'cg_annotate', 'x86_64-apple-darwin19-gcc-10.1.0', 'img2webp', 'mpichversion', 'hwloc-ls', 'pamstretch-gen', 'pbmmask', 'ppmglobe', 'tiffdither', 'sputoppm', 'mpicc', 'cmuwmtopbm', 'pelican-quickstart', 'gcc-10', 'fftw-wisdom', 'pngtopnm', 'pamstereogram', 'python3-config', 'f2py', 'qdelaunay', 'tiffset', 'tclsh', 'pamflip', 'pfmtopam', 'avstopam', 'tgatoppm', 'giftogd2', 'pbmtextps', 'pango-view', 'ppmpat', 'pamtoxvmini', 'hpcdtoppm', 'h5watch', 'pi3topbm', 'pbmtoepson', 'pnmnorm', 'ppmtobmp', 'tiff2ps', 'pnmtoxwd', 'pamcrater', 'pango-list', 'hb-ot-shape-closure', 'qrttoppm', 'heif-thumbnailer', 'ppmtoarbtxt', 'ppm3d', 'fig2dev', 'SophosUpdate', 'hwloc-patch', 'pamcomp', 'h5c++', 'lzless', 'cistopbm', 'pamedge', 'ode', 'valgrind-listener', 'octave-config', 'pbmtoatk', 'f2py3.7', 'ppmtoterm', 'vbox-img', 'tiffinfo', 'cairo-sphinx', 'ppmdraw', 'pnmconvol', 'octave', 'GraphicsMagick-config', 'pgmoil', 'gresource', 'flac', 'bioradtopgm', 'psidtopgm', 'heif-convert', 'pamtopfm', 'pamtojpeg2k', 'pamwipeout', 'pamsummcol', 'jpegtopnm', 'sndfile-concat', 'hipstopgm', 'ppmtopict', 'octave-5.2.0', 'graphchk', 'gettext', 'pnmcat', 'gpmetis', 'pgmminkowski', 'gtester-report', 'pc1toppm', 'pgmabel', 'atktopbm', 'ppmtogif', 'pbmclean', 'ppmrelief', 'gettext.sh', 'ctest', 'parkill', 'pamfixtrunc', 'epstool', 'xzless', 'pal2rgb', 'VBoxBalloonCtrl', 'exrmakepreview', 'msgcmp', 'lzcmp', 'pnmstitch', 'gd2topng', 'ppmtoicr', 'pygmentize', 'xzcat', 'pamhue', 'mrftopbm', 'spline', 'metaflac', 'pamthreshold', 'autoreconf', 'pamstack', 'VBoxAutostart', 'dbtoepub', 'gcc-nm-10', 'pbmtocmuwm', 'transicc', 'exrstdattr', 'sweep', 'wrjpgcom', 'mpicxx', 'pnmtofiasco', 'ppmquant', 'g++-10', 'autoconf', 'sndfile-deinterleave', 'pbmtoplot', 'qconvex', 'pbmmake', 'pnmtotiffcmyk', 'gcc-ar-10', 'pamtoavs', 'pbmtosunicon', 'pamsumm', 'pnmpsnr', 'h5diff', 'ppmtopgm', 'msgcat', 'pbmtopk', 'pgmbentley', 'autoheader', 'hwloc-gather-cpuid', 'pamendian', 'imginfo', 'rawtopgm', 'h5clear', 'psicc', 'pcretest', 'recode-sr-latin', 'glib-gettextize', 'xzcmp', 'GraphicsMagick++-config', 'pamtofits', 'gm', 'gouldtoppm', 'lzcat', 'double', 'pnmtorle', 'pamoil', 'pbmtoibm23xx', 'jpgicc', 'pydoc3.8', 'pgmmedian', 'hwloc-diff', 'yuv-distortion', 'sndfile-info', 'pammixinterlace', 'pbmtopsg3', 'lstopo-no-graphics', 'fc-cache', 'ppmtopj', 'pampop9', 'tclselect', 'pnmremap', 'hwloc-ps', 'gdbus', 'pcxtoppm', 'fc-cat', 'fftw-wisdom-to-conf', 'callgrind_annotate', 'ppmtospu', 'ppmcolors', 'ppmtoleaf', 'lzdiff', 'h5redeploy', 'pgmtost4', 'pnmtopnm', 'pgmedge', 'valgrind-di-server', 'pamvalidate', 'gdbmtool', 'sbigtopgm', 'msgexec', 'rst2xml.py', 'pelican-themes', 'pamtotiff', 'glib-genmarshal', 'pcre-config', 'ngettext', 'git-clang-format', 'ppmhist', 'qhalf', 'rst2odt.py', 'winicontoppm', 'h5debug', 'pgmmorphconv', 'pamlookup', 'gcov-10', 'dwebp', 'xbmtopbm', 'pic2tpic', 'ppmtoyuv', 'ppmtomap', 'texdistmgr', 'pgmcrater', 'ifnames', 'pnmalias', 'pnmcolormap', 'pammixmulti', 'pgmtopbm', 'pbmto10x', 'x86_64-apple-darwin19-g++-10', 'ppmtopcx', 'lua5.3', 'gd2copypal', 'ppmrough', 'ppmmake', 'x265', 'lzmadec', 'fax2ps', 'pnmmercator', 'rgb3toppm', 'fc-match', 'pnmgamma', 'infotopam', 'idle3.8', 'h5repart', 'lzgrep', 'msgunfmt', 'pnmtoplainpnm', 'pamdeinterlace', 'pamgradient', 'h5import', 'pnmsplit', 'tiffcp', 'lzmore', 'xvminitoppm', 'hydra_persist', 'pamfile', 'h5fc', 'mpiexec', 'pnmnlfilt', 'pamtouil', 'pamtodjvurle', 'pelican', 'pgmtofs', 'pngtogd', 'pnmmargin', 'pamchannel', 'pnmquantall', 'pbmtomacp', 'f2py3', 'pbmtext', 'sndfile-metadata-get', 'pnmpad', 'ppmwheel', 'exrenvmap', 'ppmlabel', 'thinkjettopbm', 'pnmquant', 'pbmupc', 'msgfilter', 'winicontopam', 'wftopfa', 'pamtosrf', 'pamditherbw', 'pbmtoptx', 'pgmnoise', 'pbmtolj', 'lzfgrep', 'pamarith', 'exrheader', 'rst2pseudoxml.py', 'python3.8-config', 'fc-conflist', 'glib-mkenums', 'xzmore', 'hersheydemo', 'hb-view', 'pnmdepth', 'pammosaicknit', 'ppmquantall', 'cwebp', 'sndfile-interleave', 'sndfile-convert', 'tiffmedian', 'ppmshift', 'yuy2topam', 'mpic++', 'pamenlarge', 'xzgrep', 'mpifort', 'pamgauss', 'rst2s5.py', 'pydoc3', 'pamtotga', 'hb-shape', 'valgrind', 'pbmtoln03', 'pstopnm', 'ppmtompeg', 'svgtopam', 'rst2html.py', 'hydra_nameserver', 'lzma', 'rst2man.py', 'gdbm_load', 'pamcut', 'jasper', 'gemtopnm', 'pbmtoybm', 'spottopgm', 'pamfix', 'pic2plot', 'st4topgm', 'sndfile-play', 'srftopam', 'pnmmontage', 'x86_64-apple-darwin19-gfortran-10', '2to3-3.8', 'rdjpgcom', 'ppmbrighten', 'automake', 'tek2plot', 'icontopbm', 'lzegrep', 'cpack', 'rd-curves', 'raw2tiff', 'pamtris', 'transfig', 'msgfmt', 'ppmtoapplevol', 'pgmtoppm', 'ppm2tiff', 'rstpep2html.py', 'xzdiff', 'msgattrib', 'imgcmp', 'pcregrep', 'tiff2rgba', 'x86_64-apple-darwin19-gcc-10', 'pamtopam', 'pamrubber', 'pamtowinicon', 'ppmtoascii', 'xgettext', 'hb-subset', 'ppmtv', 'ppmtomitsu', 'imgtoppm', 'gio', 'hwloc-annotate', 'xmlif', 'pamtopng', 'ppmnorm', 'ppmcolormask', 'pamtable', 'pnmscale', 'h5dump', '.keepme', 'ms_print', 'fc-scan', 'gettextize', 'pelican-import', 'VBoxVRDP', 'msguniq', 'bmptoppm', 'pnmtojbig', 'qhull', 'octave-config-5.2.0'] ['ndmetis', 'ppmtouil', 'pstoedit', 'lto-dump-10', 'lzmainfo', 'xwdtopnm', 'ppmtorgb3', 'pamtohdiff', 'pbmtoppa', 'ccmake', 'ppmtoyuvsplit', 'msgconv', 'pbmtonokia', 'leaftoppm', 'event_rpcgen.py', 'pnminvert', 'pkg-config', 'pbmpage', 'pnmrotate', 'bdftogd', 'hwloc-compress-dir', 'gen-enc-table', 'pgmslice', 'octave-cli-5.2.0', 'ppmshadow', 'anytopnm', 'asciitopgm', 'ppmtoppm', 'pgmkernel', 'tifftopnm', 'fig2ps2tex', 'msggrep', 'pbmtoescp2', 'ppmcie', 'libtool', 'ddbugtopbm', 'pgmhist', 'rawtoppm', 'webpng', 'sndfile-cmp', 'pnmcut', 'aclocal', 'pnmhistmap', 'palmtopnm', 'pamseq', 'glpsol', 'autopoint', 'mpif90', 'fitstopnm', 'pampick', 'hwloc-bind', 'pngtopam', 'pambrighten', 'ppmmix', 'tificc', 'pip3.8', 'pnmtofits', 'pamrecolor', 'pgmmake', 'pamaltsat', 'x86_64-apple-darwin19-gcc-ranlib-10', 'pbmtog3', 'gcc-ranlib-10', 'hydra_pmi_proxy', 'pbmtomrf', 'pamtilt', 'automake-1.14', 'pbmtodjvurle', 'octave-cli', 'h5copy', 'xzdec', 'luac5.3', 'tiffsplit', 'pambayer', 'ppmforge', 'font2c', 'pnmtosgi', 'ppmtojpeg', 'wheel3', 'mtvtoppm', 'pamstretch', 'h52gif', 'fax2tiff', 'pamfunc', 'pcdovtoppm', 'linkicc', 'rst2xetex.py', 'msgcomm', 'gdb', 'pnmnoraw', 'h5perf_serial', 'fc-list', 'pnmpaste', 'pamsharpness', 'opj_compress', 'GraphicsMagickWand-config', 'ppmtoilbm', 'mpirun', 'gs-noX11', 'heif-enc', 'lispmtopgm', 'gtester', 'ppmrainbow', 'bjoentegaard', 'pbmtopgm', 'pnmtops', 'pbmtocis', 'autoscan', 'callgrind_control', 'gd2togif', '411toppm', 'gfortran', 'opj_dump', '2to3', 'pbmtoxbm', 'fftwl-wisdom', 'lua-5.3', 'mkoctfile-5.2.0', 'ppmfade', 'pamperspective', 'python3', 'pnmtoddif', 'wish8.6', 'pamfind', 'plot', 'png-fix-itxt', 'gcov-dump-10', 'pamslice', 'rst2latex.py', 'gfortran-10', 'c++-10', 'pamsharpmap', 'ppmtotga', 'pbmtowbmp', 'pgmenhance', 'gnuplot', 'luac', 'jbigtopnm', 'pgmtosbig', 'cmake', 'enc265', 'ppmflash', 'opj_decompress', 'tiffdump', 'pamaddnoise', 'h5unjam', 'pbmtogem', 'ppmspread', 'ppmddumpfont', 'fc-pattern', 'mpiexec.hydra', 'ilbmtoppm', 'pbmtox10bm', 'pnmfile', 'aclocal-1.14', 'unxz', 'ppmdmkfont', 'qvoronoi', 'pbmtolps', 'hwloc-distrib', 'tiff2bw', 'cg_merge', 'pammasksharpen', 'jiv', 'freetype-config', 'pip3', 'exrmultipart', 'pgmnorm', 'gr2fonttest', 'sunicontopnm', 'exrmultiview', 'gdbus-codegen', 'fc-validate', 'pamtopdbimg', 'cjpeg', 'teacup', 'autom4te', 'ppmchange', 'h5stat', 'cmpfillin', 'easy_install-3.8', 'escp2topbm', 'jpegtran', 'h5ls', 'exrmaketiled', 'clang-format', 'lstopo', 'pbmminkowski', 'libpng16-config', 'heif-info', 'yuvtoppm', 'xzegrep', 'gsettings', 'VBoxManage', 'pngfix', 'zeisstopnm', 'vagrant', 'xmlto', 'glib-compile-schemas', 'webpmux', 'pamscale', 'pgmtopgm', 'fc-query', 'tiffcmp', 'pnmtopng', 'cameratopam', 'pnmtojpeg', 'gcov-tool-10', 'luac-5.3', 'yuvsplittoppm', 'rasttopnm', 'exr2aces', 'ppmtopjxl', 'tiff2pdf', 'pbmtoicon', 'pbmreduce', 'ppmdist', 'pamsistoaglyph', 'wish', 'pbmtozinc', 'unlzma', 'pgmtexture', 'pbmto4425', 'ppmdim', 'pbmpscale', 'ppmtopuzz', 'ybmtopbm', 'pbmtomgr', 'pbmtopi3', 'hdifftopam', 'pamexec', 'ppmtowinicon', 'pktopbm', 'pgmtolispm', 'x86_64-apple-darwin19-c++-10', 'fiascotopnm', 'pamdepth', 'update-mime-database', 'VBoxHeadless', 'hwloc-calc', 'gif2h5', 'pnmarith', 'pjtoppm', 'xzfgrep', 'sirtopnm', 'vgdb', 'webpinfo', 'gdtopng', 'hwloc-info', 'h5jam', 'libpng-config', 'pnmscalefixed', 'gdbm_dump', 'pbmtomda', 'fltk-config', 'pamtompfont', 'mkoctfile', 'gobject-query', 'brushtopbm', 'pnmsmooth', 'pnmenlarge', 'brew', 'pnmtopclxl', 'fstopgm', 'pgmdeshadow', 'plotfont', 'graph', 'ppmtopi1', 'ppmdcfont', 'h5cc', 'bmptopnm', 'pnminterp', 'g3topbm', 'cpp-10', 'pamgetcolor', 'pbmtoascii', 'pnmcrop', 'pnmtopalm', 'pamsplit', 'pbmlife', 'pamundice', 'xpmtoppm', 'rletopnm', 'pngtogd2', 'x86_64-apple-darwin19-gcc-ar-10', 'mpivars', 'msgen', 'sgitopnm', 'pbmtoepsi', 'sldtoppm', 'tclsh8.6', 'sndfile-metadata-set', 'pnmflip', 'eyuvtoppm', 'autoupdate', 'gs-X11', 'python3.8', 'pnmtosir', 'pambackground', 'rst2odt_prepstyles.py', 'manweb', 'pdbimgtopam', 'jpeg2ktopam', 'pnmtotiff', 'pamshadedrelief', 'mdatopbm', 'ppmtoeyuv', 'ppmntsc', 'djpeg', 'gs-X11-Yosemite', 'picttoppm', 'giftopnm', 'sndfile-salvage', 'pnmindex', 'pnmshear', 'pnmtile', 'annotate', 'msgmerge', 'pamtopnm', 'fftwf-wisdom', 'pamunlookup', 'pamlevels', 'tiffcrop', 'gs-noX11-Yosemite', 'neotoppm', 'wbmptopbm', 'pbmtobbnbg', 'h5mkgrp', 'pamrgbatopng', 'libtoolize', 'rlatopam', 'pgmramp', 'm2gmetis', 'pnmcomp', 'pamtooctaveimg', 'gio-querymodules', 'mpif77', 'pamtohtmltbl', 'pcdindex', 'ppmtoneo', 'fribidi', 'ppmtosixel', 'pnmtorast', 'h5format_convert', 'pnmhisteq', 'gemtopbm', 'idle3', 'cg_diff', 'mpmetis', 'gdcmpgif', 'envsubst', 'xz', 'ppmdither', 'pi1toppm', 'pampaintspill', 'spctoppm', 'cairo-trace', 'VirtualBox', 'x86_64-apple-darwin19-gcc-nm-10', 'pbmtomatrixorbital', 'gdparttopng', 'mgrtopbm', 'h5repack', 'fluid', 'ximtoppm', 'glib-compile-resources', 'pamtogif', 'ppmtoacad', 'vboxwebsrv', 'msginit', 'mongoose', 'rbox', 'lua', 'pamdice', 'macptopbm', 'pamtosvg', 'pbmtogo', 'VBoxDTrace', 'ppmtolj', 'ppmtoxpm', 'cg_annotate', 'x86_64-apple-darwin19-gcc-10.1.0', 'img2webp', 'mpichversion', 'hwloc-ls', 'pamstretch-gen', 'pbmmask', 'ppmglobe', 'tiffdither', 'sputoppm', 'mpicc', 'cmuwmtopbm', 'pelican-quickstart', 'gcc-10', 'fftw-wisdom', 'pngtopnm', 'pamstereogram', 'python3-config', 'f2py', 'qdelaunay', 'tiffset', 'tclsh', 'pamflip', 'pfmtopam', 'avstopam', 'tgatoppm', 'giftogd2', 'pbmtextps', 'pango-view', 'ppmpat', 'pamtoxvmini', 'hpcdtoppm', 'h5watch', 'pi3topbm', 'pbmtoepson', 'pnmnorm', 'ppmtobmp', 'tiff2ps', 'pnmtoxwd', 'pamcrater', 'pango-list', 'hb-ot-shape-closure', 'qrttoppm', 'heif-thumbnailer', 'ppmtoarbtxt', 'ppm3d', 'fig2dev', 'SophosUpdate', 'hwloc-patch', 'pamcomp', 'h5c++', 'lzless', 'cistopbm', 'pamedge', 'ode', 'valgrind-listener', 'octave-config', 'pbmtoatk', 'f2py3.7', 'ppmtoterm', 'vbox-img', 'tiffinfo', 'cairo-sphinx', 'ppmdraw', 'pnmconvol', 'octave', 'GraphicsMagick-config', 'pgmoil', 'gresource', 'flac', 'bioradtopgm', 'psidtopgm', 'heif-convert', 'pamtopfm', 'pamtojpeg2k', 'pamwipeout', 'pamsummcol', 'jpegtopnm', 'sndfile-concat', 'hipstopgm', 'ppmtopict', 'octave-5.2.0', 'graphchk', 'gettext', 'pnmcat', 'gpmetis', 'pgmminkowski', 'gtester-report', 'pc1toppm', 'pgmabel', 'atktopbm', 'ppmtogif', 'pbmclean', 'ppmrelief', 'gettext.sh', 'ctest', 'parkill', 'pamfixtrunc', 'epstool', 'xzless', 'pal2rgb', 'VBoxBalloonCtrl', 'exrmakepreview', 'msgcmp', 'lzcmp', 'pnmstitch', 'gd2topng', 'ppmtoicr', 'pygmentize', 'xzcat', 'pamhue', 'mrftopbm', 'spline', 'metaflac', 'pamthreshold', 'autoreconf', 'pamstack', 'VBoxAutostart', 'dbtoepub', 'gcc-nm-10', 'pbmtocmuwm', 'transicc', 'exrstdattr', 'sweep', 'wrjpgcom', 'mpicxx', 'pnmtofiasco', 'ppmquant', 'g++-10', 'autoconf', 'sndfile-deinterleave', 'pbmtoplot', 'qconvex', 'pbmmake', 'pnmtotiffcmyk', 'gcc-ar-10', 'pamtoavs', 'pbmtosunicon', 'pamsumm', 'pnmpsnr', 'h5diff', 'ppmtopgm', 'msgcat', 'pbmtopk', 'pgmbentley', 'autoheader', 'hwloc-gather-cpuid', 'pamendian', 'imginfo', 'rawtopgm', 'h5clear', 'psicc', 'pcretest', 'recode-sr-latin', 'glib-gettextize', 'xzcmp', 'GraphicsMagick++-config', 'pamtofits', 'gm', 'gouldtoppm', 'lzcat', 'double', 'pnmtorle', 'pamoil', 'pbmtoibm23xx', 'jpgicc', 'pydoc3.8', 'pgmmedian', 'hwloc-diff', 'yuv-distortion', 'sndfile-info', 'pammixinterlace', 'pbmtopsg3', 'lstopo-no-graphics', 'fc-cache', 'ppmtopj', 'pampop9', 'tclselect', 'pnmremap', 'hwloc-ps', 'gdbus', 'pcxtoppm', 'fc-cat', 'fftw-wisdom-to-conf', 'callgrind_annotate', 'ppmtospu', 'ppmcolors', 'ppmtoleaf', 'lzdiff', 'h5redeploy', 'pgmtost4', 'pnmtopnm', 'pgmedge', 'valgrind-di-server', 'pamvalidate', 'gdbmtool', 'sbigtopgm', 'msgexec', 'rst2xml.py', 'pelican-themes', 'pamtotiff', 'glib-genmarshal', 'pcre-config', 'ngettext', 'git-clang-format', 'ppmhist', 'qhalf', 'rst2odt.py', 'winicontoppm', 'h5debug', 'pgmmorphconv', 'pamlookup', 'gcov-10', 'dwebp', 'xbmtopbm', 'pic2tpic', 'ppmtoyuv', 'ppmtomap', 'texdistmgr', 'pgmcrater', 'ifnames', 'pnmalias', 'pnmcolormap', 'pammixmulti', 'pgmtopbm', 'pbmto10x', 'x86_64-apple-darwin19-g++-10', 'ppmtopcx', 'lua5.3', 'gd2copypal', 'ppmrough', 'ppmmake', 'x265', 'lzmadec', 'fax2ps', 'pnmmercator', 'rgb3toppm', 'fc-match', 'pnmgamma', 'infotopam', 'idle3.8', 'h5repart', 'lzgrep', 'msgunfmt', 'pnmtoplainpnm', 'pamdeinterlace', 'pamgradient', 'h5import', 'pnmsplit', 'tiffcp', 'lzmore', 'xvminitoppm', 'hydra_persist', 'pamfile', 'h5fc', 'mpiexec', 'pnmnlfilt', 'pamtouil', 'pamtodjvurle', 'pelican', 'pgmtofs', 'pngtogd', 'pnmmargin', 'pamchannel', 'pnmquantall', 'pbmtomacp', 'f2py3', 'pbmtext', 'sndfile-metadata-get', 'pnmpad', 'ppmwheel', 'exrenvmap', 'ppmlabel', 'thinkjettopbm', 'pnmquant', 'pbmupc', 'msgfilter', 'winicontopam', 'wftopfa', 'pamtosrf', 'pamditherbw', 'pbmtoptx', 'pgmnoise', 'pbmtolj', 'lzfgrep', 'pamarith', 'exrheader', 'rst2pseudoxml.py', 'python3.8-config', 'fc-conflist', 'glib-mkenums', 'xzmore', 'hersheydemo', 'hb-view', 'pnmdepth', 'pammosaicknit', 'ppmquantall', 'cwebp', 'sndfile-interleave', 'sndfile-convert', 'tiffmedian', 'ppmshift', 'yuy2topam', 'mpic++', 'pamenlarge', 'xzgrep', 'mpifort', 'pamgauss', 'rst2s5.py', 'pydoc3', 'pamtotga', 'hb-shape', 'valgrind', 'pbmtoln03', 'pstopnm', 'ppmtompeg', 'svgtopam', 'rst2html.py', 'hydra_nameserver', 'lzma', 'rst2man.py', 'gdbm_load', 'pamcut', 'jasper', 'gemtopnm', 'pbmtoybm', 'spottopgm', 'pamfix', 'pic2plot', 'st4topgm', 'sndfile-play', 'srftopam', 'pnmmontage', 'x86_64-apple-darwin19-gfortran-10', '2to3-3.8', 'rdjpgcom', 'ppmbrighten', 'automake', 'tek2plot', 'icontopbm', 'lzegrep', 'cpack', 'rd-curves', 'raw2tiff', 'pamtris', 'transfig', 'msgfmt', 'ppmtoapplevol', 'pgmtoppm', 'ppm2tiff', 'rstpep2html.py', 'xzdiff', 'msgattrib', 'imgcmp', 'pcregrep', 'tiff2rgba', 'x86_64-apple-darwin19-gcc-10', 'pamtopam', 'pamrubber', 'pamtowinicon', 'ppmtoascii', 'xgettext', 'hb-subset', 'ppmtv', 'ppmtomitsu', 'imgtoppm', 'gio', 'hwloc-annotate', 'xmlif', 'pamtopng', 'ppmnorm', 'ppmcolormask', 'pamtable', 'pnmscale', 'h5dump', '.keepme', 'ms_print', 'fc-scan', 'gettextize', 'pelican-import', 'VBoxVRDP', 'msguniq', 'bmptoppm', 'pnmtojbig', 'qhull', 'octave-config-5.2.0'] ['uux', 'cpan', 'BuildStrings', 'loads.d', 'write', 'indent', 'bzip2recover', 'hdiutil', 'top', 'javah', 'pstruct5.18', 'tee', 'binhex5.18.pl', 'xip', 'wsimport', 'bzfgrep', 'qlmanage', 'snmptranslate', 'split', 'chsh', 'stty.pl', 'xml2man', 'iprofiler', 'man', 'lpoptions', 'tabs', 'smtpd2.7.py', 'rview', 'lsvfs', 'zgrep', 'dbiprof', 'zmore', 'corelist5.28', 'cpanp-run-perl', 'gcov', 'iptab5.28', 'svn', 'vim', 'idle2.7', 'macerror5.18', 'xjc', 'lwp-request5.18', 'bzmore', 'package-stash-conflicts', 'cancel', 'apply', 'bzgrep', 'umask', 'g++', 'libtool', 'pre-grohtml', 'colcrt', 'phpize', 'unalias', 'mp2bug', 'groff', 'mkfifo', 'toe', 'hexdump', 'spfd5.18', 'idle', 'crc325.18', 'Rez', 'cap_mkdb', 'ictool', 'cmp', 'syscallbypid.d', 'snmpset', 'locate', 'binhex5.28.pl', 'afconvert', 'afclip', 'bzegrep', 'neqn', 'instmodsh', 'extcheck', 'javapackager', 'pl', 'compress', 'corelist5.18', 'fddist', 'db_upgrade', 'diagnose-fu', 'ctags', 'iptab5.18', 'zdiff', 'macerror5.28', 'pathchk', 'mesg', 'setregion', 'perlivp', 'c++', 'pod2readme', 'vi', 'iofileb.d', 'errinfo', 'zipgrep', 'pod2usage', 'alias', 'wait', 'psed5.18', 'safaridriver', 'bzdiff', 'lwp-request5.28', 'unpack200', 'corelist', 'expand', 'strings', 'appletviewer', 'idlj', 'wall', 'spfd5.28', 'brctl', 'crc325.28', 'gm4', 'db_hotbackup', 'auvaltool', 'applesingle', 'clang', 'ibtool', 'tty', 'git-receive-pack', 'infotocap', 'pkill', 'pwhich5.18', 'cups-config', 'basename', 'nclist', 'objdump', 'install', 'native2ascii', 'c99', 'desdp', 'binhex', 'lsmp', 'xmllint', 'texi2pdf', 'last', 'vm_stat', 'syslog', 'spfquery5.18', 'net-snmp-cert', 'nslookup', 'prove5.18', 'vimdiff', 'topsyscall', 'cpan2dist5.18', '2to3-2.7', 'libnetcfg', 'c++filt', 'avbdiagnose', 'nice', 'perlivp5.18', 'xcscontrol', 'calendar', 'locale', 'strip', 'symbolscache', 'tfmtodit', 'trace', 'tops', 'lprm', 'tiffutil', 'du', 'diff3', 'cupstestppd', 'sw_vers', 'fs_usage', 'host', 's2p5.18', 'jarsigner', 'app-sso', 'grolbp', 'nscurl', 'logger', 'caffeinate', 'say', 'net-snmp-create-v3-user', 'lwp-download5.18', 'plutil', 'python3', 'avbutil', 'enc2xs5.28', 'xcode-select', 'powermetrics', 'moose-outdated', 'c2ph', 'net-server', 'cvmkdir', 'ldapmodify', 'iofile.d', 'join', 'SafeEjectGPU', 'snmpdelta', 'ssh-keyscan', 'phar.phar', 'renice', 'xxd', 'scandeps.pl', 'nettop', 'ppdmerge', 'snmpconf', 'xsltproc', 'osascript', 'pwhich5.28', 'troff', 'iotop', 'mmroff', 'lex', 'encguess', 'ctf_insert', 'csplit', 'iconv', 'captoinfo', 'snmpinform', 'lsbom', 'pbcopy', 'sort', 'xpath', 'snmpdf', 'whoami', 'sc_usage', 'jot', 'spfquery5.28', 'ocspcheck', 'prove5.28', 'mkbom', 'groffer', 'ldapurl', 'json_xs', 'pkgbuild', 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'xgettext5.18.pl', 'serialver', 'afida', 'pgrep', 'yes', 'lessecho', 'sdiff', 'afscexpand', 'treereg5.18', 'cpan5.18', 'db_deadlock', 'ldapcompare', 'unexpand', 'git-upload-pack', 'ssh-copy-id', 'grolj4', 'fixproc', 'debinhex.pl', 'lorder', 'pod2html5.18', 'ranlib', 'javadoc', 'tput', 'fgrep', 'json_pp5.18', 'sigdist.d', 'ppdhtml', 'libnetcfg5.18', 'auval', 'erb', 'dappprof', 'openssl', 'instmodsh5.28', 'drutil', 'jinfo', 'ip2cc5.28', 'splain', 'pmset', 'xmlcatalog', 'zcmp', 'ptargrep5.28', 'lwp-mirror5.28', 'rwsnoop', 'jstatd', 'htmltree5.28', 'lpr', 'layerutil', 'snmptest', 'mib2c-update', 'grog', 'creatbyproc.d', 'pstruct', 'fdesetup', 'flex', 'hostinfo', 'jcontrol', 'MergePef', 'lpstat', 'SetFile', 'pl2pm5.28', 'pod2html', 'rebase', 'tar', 'rdoc', 'uptime', 's2p', 'pidpersec.d', 'xpath5.18', 'schemagen', 'moo-outdated5.28', 'pod2usage5.28', 'dbiprof5.28', 'cvcp', 'package-stash-conflicts5.28', 'false', 'zegrep', 'memory_pressure', 'uncompress', 'lwp-request', 'ncurses5.4-config', 'findrule5.28', 'sampleproc', 'db_recover', 'ptar5.28', 'h2xs5.28', 'nmedit', 'filebyproc.d', 'bison', 'tclsh8.5', 'jdeps', 'productbuild', 'zipinfo', 'diffstat', 'login', 'db_dump', 'smtpd.py', 'cpuctl', 'cpu_profiler.d', 'which', 'bundler', 'iopattern', 'finger', 'mig', 'sntp', 'klist', 'open', 'GetFileInfo', 'localedef', 'ruby', 'stringdups', 'htmltree', 'ptargrep5.18', 'git', 'tr', 'lwp-mirror5.18', 'htmltree5.18', 'banner', 'leave', 'jconsole', 'paste', 'RezWack', 'moo-outdated5.18', 'bzip2', 'pod2usage5.18', 'uucp', 'passwd', 'dbiprof5.18', 'package-stash-conflicts5.18', 'uuidgen', 'pl2pm5.18', 'install_name_tool', 'cmpdylib', 'makeinfo', 'php-config', 'zfgrep', 'xpath5.28', 'snfsdefrag', 'zipdetails', 'look', 'findrule5.18', 'col', 'dscacheutil', 'ptar5.18', 'zforce', 'lwp-mirror', 'malloc_history', 'cpio', 'nohup', 'kcc', 'ulimit', 'rails', 'bspatch', 'RezDet', 'hotspot.d', 'cvaffinity', 'gatherheaderdoc', 'ppdi', 'pcap-config', 'avmetareadwrite', 'update_dyld_shared_cache_root_mode', 'gen_bridge_metadata', 'gem', 'opendiff', 'h2xs5.18', 'talk', 'expect', 'jimage', 'lockstat', 'dapptrace', 'install-info', 'xattr', 'w', 'gunzip'] ['cat', 'echo', 'launchctl', 'df', 'pwd', 'test', 'csh', 'wait4path', 'unlink', 'sleep', 'stty', 'date', 'ed', 'expr', 'pax', 'bash', 'kill', 'sh', 'ps', 'link', 'tcsh', 'dd', 'mkdir', 'ksh', 'hostname', 'dash', 'rmdir', 'mv', 'ln', 'ls', 'cp', 'sync', 'zsh', 'chmod', 'rm', '['] ['dsconfigad', 'htdbm', 'netbiosd', 'postlock', 'systemsoundserverd', 'dseditgroup', 'avbdeviced', 'rpcinfo', 'BootCacheControl', 'weakpass_edit', 'periodic', 'accton', 'wfsctl', 'postalias', 'slapacl', 'edquota', 'sndiskmove', 'pdisk', 'amt', 'lpadmin', 'fdisk', 'sysadminctl', 'networksetup', 'envvars', 'ktutil', 'setquota', 'otctl', 'sncfgvalidate', 'php-fpm', 'AppleFileServer', 'dnctl', 'mDNSResponder', 'repquota', 'cupsfilter', 'checkgid', 'uuconv', 'sharing', 'vifs', 'ac', 'racoon', 'dsenableroot', 'xsanctl', 'kdcsetup', 'aslmanager', 'screencapture', 'htdigest', 'rtsold', 'chat', 'DevToolsSecurity', 'logresolve', 'cvdbset', 'KernelEventAgent', 'gpt', 'scutil', 'ioreg', 'ab', 'traceroute6', 'pwd_mkdb', 'sysctl', 'appsleepd', 'sshd', 'mDNSResponderHelper', 'authserver', 'sncfginstall', 'postmulti', 'lsof', 'pkgutil', 'slapindex', 'sc_auth', 'ioclasscount', 'uucico', 'firmwarepasswd', 'rarpd', 'tsig-keygen', 'kadmin.local', 'syslogd', 'taskpolicy', 'filecoordinationd', 'dot_clean', 'PasswordService', 'systemsetup', 'zdump', 'snmpd', 'ndp', 'coreaudiod', 'rpcbind', 'praudit', 'usernoted', 'postkick', 'postcat', 'netstat', 'lpc', 'slapadd', 'krbservicesetup', 'sncfgtemplate', 'slapconfig', 'rtadvd', 'httxt2dbm', 'distnoted', 'mtree', 'cupsdisable', 'lpmove', 'disktool', 'purge', 'rpc.statd', 'cupsctl', 'DirectoryService', 'notifyd', 'klist_cdhashes', 'dtrace', 'kextcache', 'cupsd', 'dbmmanage', 'languagesetup', 'skywalkctl', 'mkpassdb', 'postconf', 'createhomedir', 'ocspd', 'iostat', 'cvdb', 'sa', 'rpc.lockd', 'uuxqt', 'mkfile', 'softwareupdate', 'unsetpassword', 'zic', 'nfs4mapid', 'postsuper', 'htpasswd', 'rotatelogs', 'universalaccessd', 'audit', 'httpd', 'bluetoothaudiod', 'slapauth', 'slappasswd', 'localemanager', 'asr', 'cvupdatefs', 'bless', 'cvgather', 'xscertadmin', 'visudo', 'uusched', 'dsconfigldap', 'smbdiagnose', 'cfprefsd', 'auditd', 'uuchk', 'cvfsck', 'kextfind', 'diskutil', 'cvfsid', 'sso_util', 'vsdbutil', 'ddns-confgen', 'ioalloccount', 'uasysdiagnose', 'dev_mkdb', 'hdik', 'slapdn', 'vpnd', 'postqueue', 'setkey', 'tpctl', 'repairHomePermissions', 'spindump', 'cupsreject', 'traceroute', 'quotaoff', 'newsyslog', 'postfix', 'cvfsdb', 'snmptrapd', 'chroot', 'arp', 'cupsaccept', 'nvram', 'chown', 'mkextunpack', 'sncfgremove', 'sncfgquery', 'postlog', 'installer', 'pppd', 'httpd-wrapper', 'system_profiler', 'fcgistarter', 'bluetoothd', 'slapschema', 'kadmin', 'spray', 'cvversions', 'kextlibs', 'tcpdump', 'xartutil', 'securityd', 'nlcontrol', 'quotaon', 'spctl', 'vipw', 'gssd', 'slaptest', 'automount', 'scselect', 'envvars-std', 'graphicssession', 'ckksctl', 'lpinfo', 'smbd', 'serverinfo', 'cvmkfs', 'postmap', 'postdrop', 'cupsenable', 'cron', 'systemstats', 'bnepd', 'kextstat', 'cvlabel', 'sendmail', 'systemkeychain', 'kcditto', 'slapcat', 'ipconfig', 'auditreduce', 'cvadmin', 'WirelessRadioManagerd', 'apachectl', 'htcacheclean'] ['mount_hfs', 'mount_apfs', 'md5', 'fsck', 'mount_udf', 'quotacheck', 'mount_cd9660', 'ping', 'fsck_exfat', 'mount_exfat', 'fsck_udf', 'shutdown', 'route', 'mount_webdav', 'fsck_hfs', 'nfsd', 'reboot', 'nfsiod', 'fsck_cs', 'fsck_apfs', 'fstyp_msdos', 'disklabel', 'mount_msdos', 'fsck_msdos', 'ifconfig', 'halt', 'mount_9p', 'mount_ntfs', 'rtsol', 'newfs_apfs', 'umount', 'fstyp', 'kextunload', 'mpioutil', 'fstyp_ntfs', 'emond', 'mount_nfs', 'newfs_udf', 'mount_ftp', 'pfctl', 'mknod', 'fstyp_udf', 'dmesg', 'mount', 'fibreconfig', 'fstyp_hfs', 'newfs_hfs', 'dynamic_pager', 'launchd', 'newfs_exfat', 'apfs_hfs_convert', 'nologin', 'mount_afp', 'mount_smbfs', 'ping6', 'kextload', 'mount_cddafs', 'mount_fdesc', 'newfs_msdos', 'mount_acfs', 'mount_devfs'] ['luajittex', 'lollipop', 't1disasm', 'chktex', 'rubikrotation', 'lily-rebuild-pdfs', 'weave', 'mag', 'man', 'ebb', 'prepmx', 'mktexlsr', 'gsftopk', 'upmendex', 'dvibook', 'kpsewhere', 'rumakeindex', 'fontinst', 'cef5conv', 'lacheck', 'httexi', 'lily-image-commands', 'texloganalyser', 'dvilj', 'patgen', 'uptex', 'exceltex', 'pdvitype', 'texconfig-sys', 'xmltex', 'vlna', 'texsis', 'dvipdft', 'pdfjam-pocketmod', 'urlbst', 'pdfcslatex', 'afm2afm', 'cefconv', 'pdfjam-slides6up', 'sjisconv', 'tex2xindy', 'musixtex', 'pdfcsplain', 'opl2ofm', 'de-macro', 'bbl2bib', 'ltx2crossrefxml', 'pdftex', 'r-mpost', 'dvitodvi', 'gftodvi', 'dviconcat', 'texluajitc', 'dvipng', 'komkindex', 'tex', 'sty2dtx', 'ppltotf', 'yplan', 'eplain', 'eptex', 'lily-glyph-commands', 'htmex', 'texlua', 'htxelatex', 'xasy', 'fmtutil-user', 'wovp2ovf', 'dvilualatex', 'cefsconv', 'context', 'platex', 'allec', 'adhocfilelist', 'kpsetool', 'makejvf', 'texdoctk', 'vptovf', 'tex4ht', 'texluajit', 'mtxrunjit', 'uplatex', 'musixflx', 'pfarrei', 'mf', 'latexdiff-vc', 'ttfdump', 'etex', 'fig4latex', 'bibexport', 'ttf2tfm', 'latexmk', 'pmpost', 'ctwill', 'pst2pdf', 'wordcount', 'pdfbook', 'texconfig-dialog', 'lwarpmk', 'dvilj2p', 'dviinfox', 'ttf2kotexfont', 'ctanbib', 'cweave', 'bg5+latex', 'pdfatfi', 'ptex2pdf', 'e2pall', 'kpsewhich', 'upbibtex', 'texdiff', 'mathspic', 'kanji-fontmap-creator', 'kanji-config-updmap', 'asy', 'typeoutfileinfo', 'upmpost', 'pdflatex', 'perltex', 'mkt1font', 'cefslatex', 'cjk-gs-integrate', 'chkdvifont', 'dvitype', 'pdfjadetex', 't1lint', 'jamo-normalize', 'fmtutil-sys', 'wofm2opl', 'dviasm', 'kpsestat', 'pdfxup', 'makedtx', 'pltotf', 'mkindex', 'dvilj6', 'r-pmpost', 'xindy.mem', 'xetex', 'latex', 'ps4pdf', 'multibibliography', 'teckit_compile', 'ttf2afm', 'biburl2doi', 'getmapdl', 'uptftopl', 'contextjit', 'bib2gls', 'match_parens', 'mkjobtexmf', 'pdf90', 'updvitomp', 'ps2eps', 'pkfix-helper', 'chkweb', 'arlatex', 'pdfpun', 'pn2pdf', 'pdfclose', 'xindex', 'clxelatex', 'dosepsbin', 'jadetex', 'a2ping', 'bibzbladd', 'ovf2ovp', 'mfluajit-nowin', 'mpost', 'texosquery-jre5', 'texhash', 'convbkmk', 'thumbpdf', 'pkfix', 'dvihp', 'hbf2gf', 'xindy.run', 'texcount', 'pdf180', 'texmfstart', 'latexrevise', 'cefpdflatex', 'texluac', 'dvicopy', 'lua2dox_filter', 'ctie', 'pdftex-quiet', 'euptex', 'pdftosrc', 'mf-nowin', 'ctangle', 'omfonts', 't1asm', 'mflua-nowin', 'cluttex', 'svn-multi', 'mk4ht', 'afm2tfm', 'pdfopen', 'fragmaster', 'pdfnup', 'ebong', 'ctanify', 'pygmentex', 'texdef', 'luatex', 'cslatex', 'synctex', 'texdirflatten', 'gbkpdflatex', 'xdvipdfmx', 'sjispdflatex', 'makeindex', 'dviluatex', 'mkofm', 'dvipdfmx', 'psbook', 'dvispc', 'csplain', 'ttftotype42', 'mft', 't1rawafm', 'fmtutil', 'ctwill-twinx', 'simpdftex', 'depythontex', 'otfinfo', 'latexindent', 'kanji-config-updmap-sys', 'extconv', 'disdvi', 'pdvitomp', 'dvipdfm', 'texliveonfly', 'allneeded', 'htcontext', 't1testpage', 'biber', 'dv2dt', 'xindy', 'pdfbook2', 't1unmac', 'xelatex', 'webquiz', 'kpsepath', 'diadia', 'makeglossaries', 'cef5pdflatex', 'autoinst', 'mkpic', 'splitindex', 'repstopdf', 'otangle', 'mfplain', 'latexfileversion', 'latex-git-log', 'inimf', 'latex2man', 'ps2pk', 'htxetex', 'l3build', 'ptftopl', 'ptex', 'gbklatex', 't1binary', 'bibtex', 't1dotlessj', 'mktexpk', 'detex', 'htlatex', 'odvicopy', 'dvidvi', 'extractres', 'extractbb', 'tie', 'latexdef', 'tlmgr', 'arara', 'ctan-o-mat', 'rubibtex', 'dvigif', 'gftype', 'ketcindy', 'kpseaccess', 'luacsplain', 'cachepic', 'srcredact', 'dtxgen', 'mmafm', 'pktype', 'kpsexpand', 'pktogf', 'msxlint', 't1reencode', 'vftovp', 'xhlatex', 'ht', 'pdf270', 'mendex', 'make4ht', 'ceflatex', 'texlinks', 'pmxchords', 'mptopdf', 'afm2pl', 'mktexmf', 'lamed', 'gftopk', 'ulqda', 'dvilj4l', 'pooltype', 'pdfjoin', 'bg5latex', 'bibmradd', 'aleph', 'wovf2ovp', 'pdfetex', 'dvi2tty', 'ofm2opl', 'pslatex', 'initex', 'latexpand', 'mkgrkindex', 'mtxrun', 'epsffit', 'listings-ext.sh', 'mktexfmt', 'scor2prt', 'psnup', 'ot2kpx', 'allcm', 'pk2bm', 'dvitomp', 'texindy', 'vpl2vpl', 'luatools', 'cef5latex', 'ctwill-refsort', 'bg5+pdflatex', 'dvisvgm', 'tex2aspc', 'bg5conv', 'deweb', 'tlcockpit', 'cfftot1', 'dviselect', 'odvitype', 'vpl2ovp', 'otp2ocp', 'latexdiff', 'dt2dv', 'bg5pdflatex', 'mf2pt1', 'psresize', 't1mac', 'epspdf', 'pythontex', 'bibtexu', 'authorindex', 'texosquery', 'tlshell', 'pdfxmltex', 'pdfjam-slides3up', 'includeres', 't1ascii', 'pdflatexpicscale', 'mfluajit', 'axohelp', 'tangle', 'httex', 'texosquery-jre8', 'checkcites', 'bibtex8', 'dvi2fax', 'otftotfm', 'cefspdflatex', 'mmpfb', 'pfb2pfa', 'vpe', 'psselect', 'findhyph', 'gregorio', 'ovp2ovf', 'utf8mex', 'mflua', 'purifyeps', 'autosp', 'bundledoc', 'mllatex', 'tex4ebook', 'xdvi-xaw', 'sjislatex', 'rungs', 'dvilj4', 'ltxfileinfo', 'texconfig', 'updvitype', 'ltximg', 'updmap-user', 'dvips', 'convertgls2bib', 'latex2nemeth', 'pdfjam', 'epstopdf', 'outocp', 'pedigree', 'mkocp', 'kpsereadlink', 'ttf2pk', 'tpic2pdftex', 'kanji-config-updmap-user', 'psjoin', 'm-tx', 'uppltotf', 'texdoc', 'bbox', 'dvired', 'latex-papersize', 'makeglossaries-lite', 't4ht', 'xdvi', 'ps2frag', 'wopl2ofm', 'devnag', 'ctanupload', 'texexec', 'listbib', 'cllualatex', 'lualatex', 'pmxab', 'jfmutil', 'pdfmex', 'tftopl', 'mltex', 'amstex', 'pbibtex', 'pstops', 'mex', 'bibdoiadd', 'pdfflip', 'updmap', 'dvipos', 'luaotfload-tool', 'epspdftk', 'updmap-sys', 'r-upmpost', 'mktextfm', 'texfot', 'checklistings', 'rpdfcrop', 'a5toa4', 'installfont-tl', 'pdfcrop', 'pdfannotextractor'] ['xfs', 'xfsinfo', 'atobm', 'xdpyinfo', 'showrgb', 'xlsfonts', 'editres', 'fonttosfnt', 'xfontsel', 'xclock', 'xmore', 'xman', 'xmag', 'xrefresh', 'fc-list', 'xdmshell', 'xauth', 'twm', 'cxpm', 'mkfontdir', 'xclipboard', 'png-fix-itxt', 'ucs2any', 'xterm', 'bdftruncate', 'xsetroot', 'xmessage', 'xcursorgen', 'fc-pattern', 'xkbvleds', 'xkbbell', 'freetype-config', 'Xephyr', 'fc-validate', 'bitmap', 'libpng16-config', 'pngfix', 'fc-query', 'xkbprint', 'luit', 'xhost', 'gtf', 'listres', 'x11perf', 'Xorg', 'libpng-config', 'koi8rxterm', 'xpr', 'xstdcmap', 'xgc', 'mkfontscale', 'setxkbmap', 'xinit', 'Xquartz', 'xbacklight', 'xdm', 'xcmsdb', 'xdpr', 'xfindproxy', 'xrdb', 'xlsclients', 'xprop', 'xkeystone', 'xeyes', 'Xvfb', 'Xnest', 'xev', 'startx', 'xkbwatch', 'xscope', 'xfd', 'sessreg', 'xwud', 'lndir', 'xinput', 'xconsole', 'glxinfo', 'sxpm', 'xsetmode', 'Xfake', 'fslsfonts', 'xcompmgr', 'xrandr', 'bmtoa', 'xwd', 'xmodmap', 'glxgears', 'fc-cache', 'iceauth', 'cvt', 'xcutsel', 'bdftopcf', 'fc-cat', 'xsetpointer', 'xkbevd', 'quartz-wm', 'xsm', 'appres', 'xset', 'xlsatoms', 'fc-match', 'oclock', 'x11perfcomp', 'resize', 'showfont', 'xditview', 'xwininfo', 'xvinfo', 'xcalc', 'xgamma', 'makedepend', 'viewres', 'ico', 'X', 'gccmakedep', 'xedit', 'smproxy', 'xkill', 'xkbcomp', 'xload', 'font_cache', 'xmh', 'xlogo', 'fstobdf', 'uxterm', 'fc-scan'] ['rvictl'] ['ndmetis', 'ppmtouil', 'pstoedit', 'lto-dump-10', 'lzmainfo', 'xwdtopnm', 'ppmtorgb3', 'pamtohdiff', 'pbmtoppa', 'ccmake', 'ppmtoyuvsplit', 'msgconv', 'pbmtonokia', 'leaftoppm', 'event_rpcgen.py', 'pnminvert', 'pkg-config', 'pbmpage', 'pnmrotate', 'bdftogd', 'hwloc-compress-dir', 'gen-enc-table', 'pgmslice', 'octave-cli-5.2.0', 'ppmshadow', 'anytopnm', 'asciitopgm', 'ppmtoppm', 'pgmkernel', 'tifftopnm', 'fig2ps2tex', 'msggrep', 'pbmtoescp2', 'ppmcie', 'libtool', 'ddbugtopbm', 'pgmhist', 'rawtoppm', 'webpng', 'sndfile-cmp', 'pnmcut', 'aclocal', 'pnmhistmap', 'palmtopnm', 'pamseq', 'glpsol', 'autopoint', 'mpif90', 'fitstopnm', 'pampick', 'hwloc-bind', 'pngtopam', 'pambrighten', 'ppmmix', 'tificc', 'pip3.8', 'pnmtofits', 'pamrecolor', 'pgmmake', 'pamaltsat', 'x86_64-apple-darwin19-gcc-ranlib-10', 'pbmtog3', 'gcc-ranlib-10', 'hydra_pmi_proxy', 'pbmtomrf', 'pamtilt', 'automake-1.14', 'pbmtodjvurle', 'octave-cli', 'h5copy', 'xzdec', 'luac5.3', 'tiffsplit', 'pambayer', 'ppmforge', 'font2c', 'pnmtosgi', 'ppmtojpeg', 'wheel3', 'mtvtoppm', 'pamstretch', 'h52gif', 'fax2tiff', 'pamfunc', 'pcdovtoppm', 'linkicc', 'rst2xetex.py', 'msgcomm', 'gdb', 'pnmnoraw', 'h5perf_serial', 'fc-list', 'pnmpaste', 'pamsharpness', 'opj_compress', 'GraphicsMagickWand-config', 'ppmtoilbm', 'mpirun', 'gs-noX11', 'heif-enc', 'lispmtopgm', 'gtester', 'ppmrainbow', 'bjoentegaard', 'pbmtopgm', 'pnmtops', 'pbmtocis', 'autoscan', 'callgrind_control', 'gd2togif', '411toppm', 'gfortran', 'opj_dump', '2to3', 'pbmtoxbm', 'fftwl-wisdom', 'lua-5.3', 'mkoctfile-5.2.0', 'ppmfade', 'pamperspective', 'python3', 'pnmtoddif', 'wish8.6', 'pamfind', 'plot', 'png-fix-itxt', 'gcov-dump-10', 'pamslice', 'rst2latex.py', 'gfortran-10', 'c++-10', 'pamsharpmap', 'ppmtotga', 'pbmtowbmp', 'pgmenhance', 'gnuplot', 'luac', 'jbigtopnm', 'pgmtosbig', 'cmake', 'enc265', 'ppmflash', 'opj_decompress', 'tiffdump', 'pamaddnoise', 'h5unjam', 'pbmtogem', 'ppmspread', 'ppmddumpfont', 'fc-pattern', 'mpiexec.hydra', 'ilbmtoppm', 'pbmtox10bm', 'pnmfile', 'aclocal-1.14', 'unxz', 'ppmdmkfont', 'qvoronoi', 'pbmtolps', 'hwloc-distrib', 'tiff2bw', 'cg_merge', 'pammasksharpen', 'jiv', 'freetype-config', 'pip3', 'exrmultipart', 'pgmnorm', 'gr2fonttest', 'sunicontopnm', 'exrmultiview', 'gdbus-codegen', 'fc-validate', 'pamtopdbimg', 'cjpeg', 'teacup', 'autom4te', 'ppmchange', 'h5stat', 'cmpfillin', 'easy_install-3.8', 'escp2topbm', 'jpegtran', 'h5ls', 'exrmaketiled', 'clang-format', 'lstopo', 'pbmminkowski', 'libpng16-config', 'heif-info', 'yuvtoppm', 'xzegrep', 'gsettings', 'VBoxManage', 'pngfix', 'zeisstopnm', 'vagrant', 'xmlto', 'glib-compile-schemas', 'webpmux', 'pamscale', 'pgmtopgm', 'fc-query', 'tiffcmp', 'pnmtopng', 'cameratopam', 'pnmtojpeg', 'gcov-tool-10', 'luac-5.3', 'yuvsplittoppm', 'rasttopnm', 'exr2aces', 'ppmtopjxl', 'tiff2pdf', 'pbmtoicon', 'pbmreduce', 'ppmdist', 'pamsistoaglyph', 'wish', 'pbmtozinc', 'unlzma', 'pgmtexture', 'pbmto4425', 'ppmdim', 'pbmpscale', 'ppmtopuzz', 'ybmtopbm', 'pbmtomgr', 'pbmtopi3', 'hdifftopam', 'pamexec', 'ppmtowinicon', 'pktopbm', 'pgmtolispm', 'x86_64-apple-darwin19-c++-10', 'fiascotopnm', 'pamdepth', 'update-mime-database', 'VBoxHeadless', 'hwloc-calc', 'gif2h5', 'pnmarith', 'pjtoppm', 'xzfgrep', 'sirtopnm', 'vgdb', 'webpinfo', 'gdtopng', 'hwloc-info', 'h5jam', 'libpng-config', 'pnmscalefixed', 'gdbm_dump', 'pbmtomda', 'fltk-config', 'pamtompfont', 'mkoctfile', 'gobject-query', 'brushtopbm', 'pnmsmooth', 'pnmenlarge', 'brew', 'pnmtopclxl', 'fstopgm', 'pgmdeshadow', 'plotfont', 'graph', 'ppmtopi1', 'ppmdcfont', 'h5cc', 'bmptopnm', 'pnminterp', 'g3topbm', 'cpp-10', 'pamgetcolor', 'pbmtoascii', 'pnmcrop', 'pnmtopalm', 'pamsplit', 'pbmlife', 'pamundice', 'xpmtoppm', 'rletopnm', 'pngtogd2', 'x86_64-apple-darwin19-gcc-ar-10', 'mpivars', 'msgen', 'sgitopnm', 'pbmtoepsi', 'sldtoppm', 'tclsh8.6', 'sndfile-metadata-set', 'pnmflip', 'eyuvtoppm', 'autoupdate', 'gs-X11', 'python3.8', 'pnmtosir', 'pambackground', 'rst2odt_prepstyles.py', 'manweb', 'pdbimgtopam', 'jpeg2ktopam', 'pnmtotiff', 'pamshadedrelief', 'mdatopbm', 'ppmtoeyuv', 'ppmntsc', 'djpeg', 'gs-X11-Yosemite', 'picttoppm', 'giftopnm', 'sndfile-salvage', 'pnmindex', 'pnmshear', 'pnmtile', 'annotate', 'msgmerge', 'pamtopnm', 'fftwf-wisdom', 'pamunlookup', 'pamlevels', 'tiffcrop', 'gs-noX11-Yosemite', 'neotoppm', 'wbmptopbm', 'pbmtobbnbg', 'h5mkgrp', 'pamrgbatopng', 'libtoolize', 'rlatopam', 'pgmramp', 'm2gmetis', 'pnmcomp', 'pamtooctaveimg', 'gio-querymodules', 'mpif77', 'pamtohtmltbl', 'pcdindex', 'ppmtoneo', 'fribidi', 'ppmtosixel', 'pnmtorast', 'h5format_convert', 'pnmhisteq', 'gemtopbm', 'idle3', 'cg_diff', 'mpmetis', 'gdcmpgif', 'envsubst', 'xz', 'ppmdither', 'pi1toppm', 'pampaintspill', 'spctoppm', 'cairo-trace', 'VirtualBox', 'x86_64-apple-darwin19-gcc-nm-10', 'pbmtomatrixorbital', 'gdparttopng', 'mgrtopbm', 'h5repack', 'fluid', 'ximtoppm', 'glib-compile-resources', 'pamtogif', 'ppmtoacad', 'vboxwebsrv', 'msginit', 'mongoose', 'rbox', 'lua', 'pamdice', 'macptopbm', 'pamtosvg', 'pbmtogo', 'VBoxDTrace', 'ppmtolj', 'ppmtoxpm', 'cg_annotate', 'x86_64-apple-darwin19-gcc-10.1.0', 'img2webp', 'mpichversion', 'hwloc-ls', 'pamstretch-gen', 'pbmmask', 'ppmglobe', 'tiffdither', 'sputoppm', 'mpicc', 'cmuwmtopbm', 'pelican-quickstart', 'gcc-10', 'fftw-wisdom', 'pngtopnm', 'pamstereogram', 'python3-config', 'f2py', 'qdelaunay', 'tiffset', 'tclsh', 'pamflip', 'pfmtopam', 'avstopam', 'tgatoppm', 'giftogd2', 'pbmtextps', 'pango-view', 'ppmpat', 'pamtoxvmini', 'hpcdtoppm', 'h5watch', 'pi3topbm', 'pbmtoepson', 'pnmnorm', 'ppmtobmp', 'tiff2ps', 'pnmtoxwd', 'pamcrater', 'pango-list', 'hb-ot-shape-closure', 'qrttoppm', 'heif-thumbnailer', 'ppmtoarbtxt', 'ppm3d', 'fig2dev', 'SophosUpdate', 'hwloc-patch', 'pamcomp', 'h5c++', 'lzless', 'cistopbm', 'pamedge', 'ode', 'valgrind-listener', 'octave-config', 'pbmtoatk', 'f2py3.7', 'ppmtoterm', 'vbox-img', 'tiffinfo', 'cairo-sphinx', 'ppmdraw', 'pnmconvol', 'octave', 'GraphicsMagick-config', 'pgmoil', 'gresource', 'flac', 'bioradtopgm', 'psidtopgm', 'heif-convert', 'pamtopfm', 'pamtojpeg2k', 'pamwipeout', 'pamsummcol', 'jpegtopnm', 'sndfile-concat', 'hipstopgm', 'ppmtopict', 'octave-5.2.0', 'graphchk', 'gettext', 'pnmcat', 'gpmetis', 'pgmminkowski', 'gtester-report', 'pc1toppm', 'pgmabel', 'atktopbm', 'ppmtogif', 'pbmclean', 'ppmrelief', 'gettext.sh', 'ctest', 'parkill', 'pamfixtrunc', 'epstool', 'xzless', 'pal2rgb', 'VBoxBalloonCtrl', 'exrmakepreview', 'msgcmp', 'lzcmp', 'pnmstitch', 'gd2topng', 'ppmtoicr', 'pygmentize', 'xzcat', 'pamhue', 'mrftopbm', 'spline', 'metaflac', 'pamthreshold', 'autoreconf', 'pamstack', 'VBoxAutostart', 'dbtoepub', 'gcc-nm-10', 'pbmtocmuwm', 'transicc', 'exrstdattr', 'sweep', 'wrjpgcom', 'mpicxx', 'pnmtofiasco', 'ppmquant', 'g++-10', 'autoconf', 'sndfile-deinterleave', 'pbmtoplot', 'qconvex', 'pbmmake', 'pnmtotiffcmyk', 'gcc-ar-10', 'pamtoavs', 'pbmtosunicon', 'pamsumm', 'pnmpsnr', 'h5diff', 'ppmtopgm', 'msgcat', 'pbmtopk', 'pgmbentley', 'autoheader', 'hwloc-gather-cpuid', 'pamendian', 'imginfo', 'rawtopgm', 'h5clear', 'psicc', 'pcretest', 'recode-sr-latin', 'glib-gettextize', 'xzcmp', 'GraphicsMagick++-config', 'pamtofits', 'gm', 'gouldtoppm', 'lzcat', 'double', 'pnmtorle', 'pamoil', 'pbmtoibm23xx', 'jpgicc', 'pydoc3.8', 'pgmmedian', 'hwloc-diff', 'yuv-distortion', 'sndfile-info', 'pammixinterlace', 'pbmtopsg3', 'lstopo-no-graphics', 'fc-cache', 'ppmtopj', 'pampop9', 'tclselect', 'pnmremap', 'hwloc-ps', 'gdbus', 'pcxtoppm', 'fc-cat', 'fftw-wisdom-to-conf', 'callgrind_annotate', 'ppmtospu', 'ppmcolors', 'ppmtoleaf', 'lzdiff', 'h5redeploy', 'pgmtost4', 'pnmtopnm', 'pgmedge', 'valgrind-di-server', 'pamvalidate', 'gdbmtool', 'sbigtopgm', 'msgexec', 'rst2xml.py', 'pelican-themes', 'pamtotiff', 'glib-genmarshal', 'pcre-config', 'ngettext', 'git-clang-format', 'ppmhist', 'qhalf', 'rst2odt.py', 'winicontoppm', 'h5debug', 'pgmmorphconv', 'pamlookup', 'gcov-10', 'dwebp', 'xbmtopbm', 'pic2tpic', 'ppmtoyuv', 'ppmtomap', 'texdistmgr', 'pgmcrater', 'ifnames', 'pnmalias', 'pnmcolormap', 'pammixmulti', 'pgmtopbm', 'pbmto10x', 'x86_64-apple-darwin19-g++-10', 'ppmtopcx', 'lua5.3', 'gd2copypal', 'ppmrough', 'ppmmake', 'x265', 'lzmadec', 'fax2ps', 'pnmmercator', 'rgb3toppm', 'fc-match', 'pnmgamma', 'infotopam', 'idle3.8', 'h5repart', 'lzgrep', 'msgunfmt', 'pnmtoplainpnm', 'pamdeinterlace', 'pamgradient', 'h5import', 'pnmsplit', 'tiffcp', 'lzmore', 'xvminitoppm', 'hydra_persist', 'pamfile', 'h5fc', 'mpiexec', 'pnmnlfilt', 'pamtouil', 'pamtodjvurle', 'pelican', 'pgmtofs', 'pngtogd', 'pnmmargin', 'pamchannel', 'pnmquantall', 'pbmtomacp', 'f2py3', 'pbmtext', 'sndfile-metadata-get', 'pnmpad', 'ppmwheel', 'exrenvmap', 'ppmlabel', 'thinkjettopbm', 'pnmquant', 'pbmupc', 'msgfilter', 'winicontopam', 'wftopfa', 'pamtosrf', 'pamditherbw', 'pbmtoptx', 'pgmnoise', 'pbmtolj', 'lzfgrep', 'pamarith', 'exrheader', 'rst2pseudoxml.py', 'python3.8-config', 'fc-conflist', 'glib-mkenums', 'xzmore', 'hersheydemo', 'hb-view', 'pnmdepth', 'pammosaicknit', 'ppmquantall', 'cwebp', 'sndfile-interleave', 'sndfile-convert', 'tiffmedian', 'ppmshift', 'yuy2topam', 'mpic++', 'pamenlarge', 'xzgrep', 'mpifort', 'pamgauss', 'rst2s5.py', 'pydoc3', 'pamtotga', 'hb-shape', 'valgrind', 'pbmtoln03', 'pstopnm', 'ppmtompeg', 'svgtopam', 'rst2html.py', 'hydra_nameserver', 'lzma', 'rst2man.py', 'gdbm_load', 'pamcut', 'jasper', 'gemtopnm', 'pbmtoybm', 'spottopgm', 'pamfix', 'pic2plot', 'st4topgm', 'sndfile-play', 'srftopam', 'pnmmontage', 'x86_64-apple-darwin19-gfortran-10', '2to3-3.8', 'rdjpgcom', 'ppmbrighten', 'automake', 'tek2plot', 'icontopbm', 'lzegrep', 'cpack', 'rd-curves', 'raw2tiff', 'pamtris', 'transfig', 'msgfmt', 'ppmtoapplevol', 'pgmtoppm', 'ppm2tiff', 'rstpep2html.py', 'xzdiff', 'msgattrib', 'imgcmp', 'pcregrep', 'tiff2rgba', 'x86_64-apple-darwin19-gcc-10', 'pamtopam', 'pamrubber', 'pamtowinicon', 'ppmtoascii', 'xgettext', 'hb-subset', 'ppmtv', 'ppmtomitsu', 'imgtoppm', 'gio', 'hwloc-annotate', 'xmlif', 'pamtopng', 'ppmnorm', 'ppmcolormask', 'pamtable', 'pnmscale', 'h5dump', '.keepme', 'ms_print', 'fc-scan', 'gettextize', 'pelican-import', 'VBoxVRDP', 'msguniq', 'bmptoppm', 'pnmtojbig', 'qhull', 'octave-config-5.2.0'] Warning accessing gives errors: [Errno 2] No such file or directory: '' Path provided by --with-executables-search-path ['win32fe.exe', 'win32feutils.dll'] child config.sourceControl 0.021612 ================================================================================ TEST configureInstallationMethod from PETSc.options.petscclone(/Users/markadams/Codes/petsc/config/PETSc/options/petscclone.py:20) TESTING: configureInstallationMethod from PETSc.options.petscclone(config/PETSc/options/petscclone.py:20) lib/petsc/bin/maint exists. This appears to be a repository clone .git directory exists Running Executable WITHOUT threads to time it out Executing: ['git', 'describe', '--match=v*'] stdout: v3.13.3-738-gc22d235c54 Running Executable WITHOUT threads to time it out Executing: ['git', 'log', '-1', '--pretty=format:%H'] stdout: c22d235c54cfc34b5f7a38f93e7baef8f4dc5a3d Running Executable WITHOUT threads to time it out Executing: ['git', 'log', '-1', '--pretty=format:%ci'] stdout: 2020-07-15 07:07:38 -0400 Running Executable WITHOUT threads to time it out Executing: ['git', 'branch'] stdout: adams/feature-dmplex-snes-landau * adams/feature-dmplex-snes-landau-kokkos adams/mat-options-bug adams/snes-ex56-eigest knepley/feature-swarm-fortran knepley/feature-swarm-fortran-rebased mark/feature-picell mark/feature-xgc-interface-omp mark/feature-xgc-interface-rebase-v2 master stefanozampini/feature-cusparse-notransgen-herm Defined "VERSION_GIT" to ""v3.13.3-738-gc22d235c54"" Defined "VERSION_DATE_GIT" to ""2020-07-15 07:07:38 -0400"" Defined "VERSION_BRANCH_GIT" to ""adams/feature-dmplex-snes-landau-kokkos"" child PETSc.options.petscclone 0.071922 ================================================================================ TEST setNativeArchitecture from PETSc.options.arch(/Users/markadams/Codes/petsc/config/PETSc/options/arch.py:31) TESTING: setNativeArchitecture from PETSc.options.arch(config/PETSc/options/arch.py:31) ================================================================================ TEST configureArchitecture from PETSc.options.arch(/Users/markadams/Codes/petsc/config/PETSc/options/arch.py:43) TESTING: configureArchitecture from PETSc.options.arch(config/PETSc/options/arch.py:43) Checks PETSC_ARCH and sets if not set =============================================================================== Warning: PETSC_ARCH from environment does not match command-line or name of script. Warning: Using from command-line or name of script: arch-macosx-gnu-g-omp, ignoring environment: arch-macosx-gnu-g =============================================================================== No previous hashfile found Setting hashfile: arch-macosx-gnu-g-omp/lib/petsc/conf/configure-hash Deleting configure hash file: arch-macosx-gnu-g-omp/lib/petsc/conf/configure-hash Unable to delete configure hash file: arch-macosx-gnu-g-omp/lib/petsc/conf/configure-hash child PETSc.options.arch 0.017116 ================================================================================ TEST setInstallDir from PETSc.options.installDir(/Users/markadams/Codes/petsc/config/PETSc/options/installDir.py:39) TESTING: setInstallDir from PETSc.options.installDir(config/PETSc/options/installDir.py:39) setup installDir to either prefix or if that is not set to PETSC_DIR/PETSC_ARCH Defined make macro "PREFIXDIR" to "/Users/markadams/Codes/petsc/arch-macosx-gnu-g-omp" ================================================================================ TEST saveReconfigure from PETSc.options.installDir(/Users/markadams/Codes/petsc/config/PETSc/options/installDir.py:85) TESTING: saveReconfigure from PETSc.options.installDir(config/PETSc/options/installDir.py:85) ================================================================================ TEST cleanConfDir from PETSc.options.installDir(/Users/markadams/Codes/petsc/config/PETSc/options/installDir.py:78) TESTING: cleanConfDir from PETSc.options.installDir(config/PETSc/options/installDir.py:78) ================================================================================ TEST configureInstallDir from PETSc.options.installDir(/Users/markadams/Codes/petsc/config/PETSc/options/installDir.py:62) TESTING: configureInstallDir from PETSc.options.installDir(config/PETSc/options/installDir.py:62) Makes installDir subdirectories if it does not exist for both prefix install location and PETSc work install location Changed persistence directory to /Users/markadams/Codes/petsc/arch-macosx-gnu-g-omp/lib/petsc/conf ================================================================================ TEST restoreReconfigure from PETSc.options.installDir(/Users/markadams/Codes/petsc/config/PETSc/options/installDir.py:98) TESTING: restoreReconfigure from PETSc.options.installDir(config/PETSc/options/installDir.py:98) child PETSc.options.installDir 0.000974 ================================================================================ TEST setExternalPackagesDir from PETSc.options.externalpackagesdir(/Users/markadams/Codes/petsc/config/PETSc/options/externalpackagesdir.py:15) TESTING: setExternalPackagesDir from PETSc.options.externalpackagesdir(config/PETSc/options/externalpackagesdir.py:15) ================================================================================ TEST cleanExternalpackagesDir from PETSc.options.externalpackagesdir(/Users/markadams/Codes/petsc/config/PETSc/options/externalpackagesdir.py:22) TESTING: cleanExternalpackagesDir from PETSc.options.externalpackagesdir(config/PETSc/options/externalpackagesdir.py:22) child PETSc.options.externalpackagesdir 0.000261 ================================================================================ TEST configureCLanguage from PETSc.options.languages(/Users/markadams/Codes/petsc/config/PETSc/options/languages.py:27) TESTING: configureCLanguage from PETSc.options.languages(config/PETSc/options/languages.py:27) Choose whether to compile the PETSc library using a C or C++ compiler =============================================================================== WARNING -with-clanguage=C++ is a developer feature and is *not* required for regular usage of PETSc either from C or C++ =============================================================================== C language is Cxx Defined "CLANGUAGE_CXX" to "1" Defined make macro "CLANGUAGE" to "CXX" child PETSc.options.languages 0.001034 ================================================================================ TEST printEnvVariables from config.setCompilers(/Users/markadams/Codes/petsc/config/BuildSystem/config/setCompilers.py:1725) TESTING: printEnvVariables from config.setCompilers(config/BuildSystem/config/setCompilers.py:1725) **** printenv **** GIT_PS1_SHOWDIRTYSTATE=1 KOKKOS_DIR=/Users/markadams/Codes/spack/opt/spack/darwin-catalina-x86_64/apple-clang-11.0.3/kokkos-3.1.01-xpnbowi3ksdtn7dak2zjgarbwjryscbm/ TERM_PROGRAM_VERSION=433 CH_TIMER=FALSE CVS_RSH=ssh LOGNAME=markadams USER=markadams HOME=/Users/markadams PATH=/usr/local/opt/llvm/bin:/opt/anaconda2/bin:/opt/anaconda2/bin:/Users/markadams/opt/miniconda2/bin:/opt/miniconda2/bin:/Users/markadams/opt/miniconda3/bin:/usr/local/opt/texinfo/bin:/Users/markadams/homebrew/sbin:/Users/markadams/homebrew/bin:/Users/markadams/homebrew/bin:/usr/local/bin:/usr/local/bin:/usr/bin:/bin:/usr/sbin:/sbin:/Library/TeX/texbin:/opt/X11/bin:/Library/Apple/usr/bin:/usr/local/bin: DBUS_LAUNCHD_SESSION_BUS_SOCKET=/private/tmp/com.apple.launchd.c2tu1PGHht/unix_domain_listener TERM_PROGRAM=Apple_Terminal LANG=en_US.UTF-8 TERM=xterm-256color SHELL=/bin/bash H5PART_DIR=/Users/markadams/Codes/H5Part-1.6.6/build VERSIONER_PYTHON_VERSION=2.7 SHLVL=1 XGC_PLATFORM=osx PETSC_ARCH=arch-macosx-gnu-g-omp XPC_FLAGS=0x0 CH_OUTPUT_INTERVAL=1000 GIT_PS1_SHOWUPSTREAM=auto PETSC_DIR=/Users/markadams/Codes/petsc _=../arch-macosx-gnu-g-omp.py SVN_EDITOR=vi ARCHFLAGS=-arch x86_64 TERM_SESSION_ID=1F9AF8EF-48F3-4D90-8364-22898F1927E4 XPC_SERVICE_NAME=0 NETCDF_DIR=/Users/markadams/SFE/NETCDF_INSTALL SSH_AUTH_SOCK=/private/tmp/com.apple.launchd.Jini6Bl8wH/Listeners DATAFILESPATH=/Users/markadams/matrices XP_LICENSE_INTERFACE=en0 TMPDIR=/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/ MACHINE=darwin DISPLAY=/private/tmp/com.apple.launchd.xMxEDUhJ7g/org.macosforge.xquartz:0 OLDPWD=/Users/markadams CH_TIMER_SAMPLE=60000 __CF_USER_TEXT_ENCODING=0x1F5:0x0:0x0 PWD=/Users/markadams/Codes/petsc PIP_DOWNLOAD_CACHE=/Users/markadams/.pip/cache SLEPC_DIR=/Users/markadams/Codes/slepc ================================================================================ TEST resetEnvCompilers from config.setCompilers(/Users/markadams/Codes/petsc/config/BuildSystem/config/setCompilers.py:1732) TESTING: resetEnvCompilers from config.setCompilers(config/BuildSystem/config/setCompilers.py:1732) ================================================================================ TEST checkEnvCompilers from config.setCompilers(/Users/markadams/Codes/petsc/config/BuildSystem/config/setCompilers.py:1762) TESTING: checkEnvCompilers from config.setCompilers(config/BuildSystem/config/setCompilers.py:1762) ================================================================================ TEST checkMPICompilerOverride from config.setCompilers(/Users/markadams/Codes/petsc/config/BuildSystem/config/setCompilers.py:1695) TESTING: checkMPICompilerOverride from config.setCompilers(config/BuildSystem/config/setCompilers.py:1695) Check if --with-mpi-dir is used along with CC CXX or FC compiler options. This usually prevents mpi compilers from being used - so issue a warning ================================================================================ TEST requireMpiLdPath from config.setCompilers(/Users/markadams/Codes/petsc/config/BuildSystem/config/setCompilers.py:1716) TESTING: requireMpiLdPath from config.setCompilers(config/BuildSystem/config/setCompilers.py:1716) OpenMPI wrappers require LD_LIBRARY_PATH set ================================================================================ TEST checkInitialFlags from config.setCompilers(/Users/markadams/Codes/petsc/config/BuildSystem/config/setCompilers.py:460) TESTING: checkInitialFlags from config.setCompilers(config/BuildSystem/config/setCompilers.py:460) Initialize the compiler and linker flags Initialized CFLAGS to Initialized CFLAGS to Initialized LDFLAGS to Initialized CUDAFLAGS to Initialized CUDAFLAGS to Initialized LDFLAGS to Initialized CXXFLAGS to Initialized CXX_CXXFLAGS to Initialized LDFLAGS to Initialized FFLAGS to Initialized FFLAGS to Initialized LDFLAGS to Initialized CPPFLAGS to Initialized FPPFLAGS to Initialized CUDAPPFLAGS to -Wno-deprecated-gpu-targets Initialized CXXPPFLAGS to Initialized CC_LINKER_FLAGS to [] Initialized CXX_LINKER_FLAGS to [] Initialized FC_LINKER_FLAGS to [] Initialized CUDAC_LINKER_FLAGS to [] Initialized sharedLibraryFlags to [] Initialized dynamicLibraryFlags to [] ================================================================================ TEST checkCCompiler from config.setCompilers(/Users/markadams/Codes/petsc/config/BuildSystem/config/setCompilers.py:635) TESTING: checkCCompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:635) Locate a functional C compiler Checking for program /usr/local/Cellar/mpich/3.3.2_1/bin/mpiicc...not found Checking for program /Users/markadams/Codes/petsc/lib/petsc/bin/win32fe/mpiicc...not found Unable to find programs ['mpiicc'] providing listing of each search directory to help debug Path provided in Python program ['mpif90', 'hydra_pmi_proxy', 'mpirun', 'mpiexec.hydra', 'mpivars', 'mpif77', 'mpichversion', 'mpicc', 'parkill', 'mpicxx', 'hydra_persist', 'mpiexec', 'mpic++', 'mpifort', 'hydra_nameserver'] Path provided by --with-executables-search-path ['win32fe.exe', 'win32feutils.dll'] Checking for program /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc...found Defined make macro "CC" to "/usr/local/Cellar/mpich/3.3.2_1/bin/mpicc" All intermediate test results are stored in /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n All intermediate test results are stored in /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o -lpetsc-ufod4vtr9mqHvKIQiVAm Possible ERROR while running linker: exit code 1 stderr: ld: library not found for -lpetsc-ufod4vtr9mqHvKIQiVAm clang-10: error: linker command failed with exit code 1 (use -v to see invocation) Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o Testing executable /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest to see if it can be run Executing: /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest Running Executable with threads to time it out at 60 Executing: /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc --version stdout: clang version 10.0.0 Target: x86_64-apple-darwin19.5.0 Thread model: posix InstalledDir: /usr/local/opt/llvm/bin Since MPI c compiler starts with mpi, force searches for other compilers to only look for MPI compilers ================================================================================ TEST checkCPreprocessor from config.setCompilers(/Users/markadams/Codes/petsc/config/BuildSystem/config/setCompilers.py:674) TESTING: checkCPreprocessor from config.setCompilers(config/BuildSystem/config/setCompilers.py:674) Locate a functional C preprocessor Checking for program /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc...found Defined make macro "CPP" to "/usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -E" Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -E -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.c Preprocess stderr before filtering: : Preprocess stderr after filtering: : ================================================================================ TEST checkCUDACompiler from config.setCompilers(/Users/markadams/Codes/petsc/config/BuildSystem/config/setCompilers.py:710) TESTING: checkCUDACompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:710) Locate a functional CUDA compiler Checking for program /usr/local/opt/llvm/bin/nvcc...not found Checking for program /opt/anaconda2/bin/nvcc...not found Checking for program /opt/anaconda2/bin/nvcc...not found Checking for program /Users/markadams/opt/miniconda2/bin/nvcc...not found Checking for program /opt/miniconda2/bin/nvcc...not found Checking for program /Users/markadams/opt/miniconda3/bin/nvcc...not found Checking for program /usr/local/opt/texinfo/bin/nvcc...not found Checking for program /Users/markadams/homebrew/sbin/nvcc...not found Checking for program /Users/markadams/homebrew/bin/nvcc...not found Checking for program /Users/markadams/homebrew/bin/nvcc...not found Checking for program /usr/local/bin/nvcc...not found Checking for program /usr/local/bin/nvcc...not found Checking for program /usr/bin/nvcc...not found Checking for program /bin/nvcc...not found Checking for program /usr/sbin/nvcc...not found Checking for program /sbin/nvcc...not found Checking for program /Library/TeX/texbin/nvcc...not found Checking for program /opt/X11/bin/nvcc...not found Checking for program /Library/Apple/usr/bin/nvcc...not found Checking for program /usr/local/bin/nvcc...not found Checking for program nvcc...not found Checking for program /Users/markadams/Codes/petsc/lib/petsc/bin/win32fe/nvcc...not found Unable to find programs ['nvcc'] providing listing of each search directory to help debug Path provided in Python program Path provided by default path ['llvm-opt-report', 'llvm-lipo', 'modularize', 'llvm-cxxdump', 'clang-change-namespace', 'verify-uselistorder', 'llvm-cvtres', 'llvm-strings', 'clang-move', 'llvm-install-name-tool', 'clangd-xpc-test-client', 'llvm-config', 'clang', 'llvm-lto2', 'llvm-cfi-verify', 'llvm-cov', 'lld', 'llc', 'llvm-link', 'not', 'llvm-symbolizer', 'llvm-objdump', 'clang-refactor', 'clang-rename', 'clangd', 'llvm-mca', 'set-xcode-analyzer', 'llvm-rc', 'clang-include-fixer', 'llvm-addr2line', 'llvm-jitlink', 'llvm-xray', 'clang-format', 'lldb', 'llvm-rtdyld', 'FileCheck', 'clang-check', 'llvm-lto', 'pp-trace', 'llvm-c-test', 'c-index-test', 'llvm-dwp', 'count', 'llvm-reduce', 'llvm-elfabi', 'llvm-mc', 'clang-reorder-fields', 'llvm-exegesis', 'llvm-readelf', 'ld.lld', 'llvm-as', 'clang-query', 'scan-build', 'llvm-nm', 'llvm-lib', 'llvm-undname', 'clang-offload-bundler', 'lldb-argdumper', 'lldb-server', 'llvm-ar', 'find-all-symbols', 'clang-cl', 'llvm-dis', 'llvm-size', 'dsymutil', 'obj2yaml', 'clang-tidy', 'wasm-ld', 'llvm-dlltool', 'llvm-readobj', 'llvm-cxxfilt', 'bugpoint', 'llvm-pdbutil', 'clang-offload-wrapper', 'clang-doc', 'llvm-ifs', 'lli', 'llvm-PerfectShuffle', 'llvm-tblgen', 'lli-child-target', 'clang-scan-deps', 'clang++', 'sancov', 'darwin-debug', 'llvm-dwarfdump', 'opt', 'clang-cpp', 'clang-extdef-mapping', 'yaml-bench', 'llvm-cat', 'git-clang-format', 'llvm-profdata', 'clang-apply-replacements', 'llvm-objcopy', 'llvm-extract', 'yaml2obj', 'sanstats', 'llvm-split', 'llvm-bcanalyzer', 'clang-10', 'lldb-instr', 'hmaptool', 'llvm-stress', 'llvm-diff', 'scan-view', 'diagtool', 'llvm-modextract', 'clang-import-test', 'lld-link', 'llvm-strip', 'llvm-mt', 'ld64.lld', 'lldb-vscode', 'llvm-ranlib', 'llvm-cxxmap'] Warning accessing /opt/anaconda2/bin gives errors: [Errno 2] No such file or directory: '/opt/anaconda2/bin' Warning accessing /opt/anaconda2/bin gives errors: [Errno 2] No such file or directory: '/opt/anaconda2/bin' Warning accessing /Users/markadams/opt/miniconda2/bin gives errors: [Errno 2] No such file or directory: '/Users/markadams/opt/miniconda2/bin' Warning accessing /opt/miniconda2/bin gives errors: [Errno 2] No such file or directory: '/opt/miniconda2/bin' Warning accessing /Users/markadams/opt/miniconda3/bin gives errors: [Errno 2] No such file or directory: '/Users/markadams/opt/miniconda3/bin' ['texi2pdf', 'pod2texi', 'texindex', 'info', 'texi2dvi', 'pdftexi2dvi', 'texi2any', 'makeinfo', 'install-info'] Warning accessing /Users/markadams/homebrew/sbin gives errors: [Errno 2] No such file or directory: '/Users/markadams/homebrew/sbin' Warning accessing /Users/markadams/homebrew/bin gives errors: [Errno 2] No such file or directory: '/Users/markadams/homebrew/bin' Warning accessing /Users/markadams/homebrew/bin gives errors: [Errno 2] No such file or directory: '/Users/markadams/homebrew/bin' ['ndmetis', 'ppmtouil', 'pstoedit', 'lto-dump-10', 'lzmainfo', 'xwdtopnm', 'ppmtorgb3', 'pamtohdiff', 'pbmtoppa', 'ccmake', 'ppmtoyuvsplit', 'msgconv', 'pbmtonokia', 'leaftoppm', 'event_rpcgen.py', 'pnminvert', 'pkg-config', 'pbmpage', 'pnmrotate', 'bdftogd', 'hwloc-compress-dir', 'gen-enc-table', 'pgmslice', 'octave-cli-5.2.0', 'ppmshadow', 'anytopnm', 'asciitopgm', 'ppmtoppm', 'pgmkernel', 'tifftopnm', 'fig2ps2tex', 'msggrep', 'pbmtoescp2', 'ppmcie', 'libtool', 'ddbugtopbm', 'pgmhist', 'rawtoppm', 'webpng', 'sndfile-cmp', 'pnmcut', 'aclocal', 'pnmhistmap', 'palmtopnm', 'pamseq', 'glpsol', 'autopoint', 'mpif90', 'fitstopnm', 'pampick', 'hwloc-bind', 'pngtopam', 'pambrighten', 'ppmmix', 'tificc', 'pip3.8', 'pnmtofits', 'pamrecolor', 'pgmmake', 'pamaltsat', 'x86_64-apple-darwin19-gcc-ranlib-10', 'pbmtog3', 'gcc-ranlib-10', 'hydra_pmi_proxy', 'pbmtomrf', 'pamtilt', 'automake-1.14', 'pbmtodjvurle', 'octave-cli', 'h5copy', 'xzdec', 'luac5.3', 'tiffsplit', 'pambayer', 'ppmforge', 'font2c', 'pnmtosgi', 'ppmtojpeg', 'wheel3', 'mtvtoppm', 'pamstretch', 'h52gif', 'fax2tiff', 'pamfunc', 'pcdovtoppm', 'linkicc', 'rst2xetex.py', 'msgcomm', 'gdb', 'pnmnoraw', 'h5perf_serial', 'fc-list', 'pnmpaste', 'pamsharpness', 'opj_compress', 'GraphicsMagickWand-config', 'ppmtoilbm', 'mpirun', 'gs-noX11', 'heif-enc', 'lispmtopgm', 'gtester', 'ppmrainbow', 'bjoentegaard', 'pbmtopgm', 'pnmtops', 'pbmtocis', 'autoscan', 'callgrind_control', 'gd2togif', '411toppm', 'gfortran', 'opj_dump', '2to3', 'pbmtoxbm', 'fftwl-wisdom', 'lua-5.3', 'mkoctfile-5.2.0', 'ppmfade', 'pamperspective', 'python3', 'pnmtoddif', 'wish8.6', 'pamfind', 'plot', 'png-fix-itxt', 'gcov-dump-10', 'pamslice', 'rst2latex.py', 'gfortran-10', 'c++-10', 'pamsharpmap', 'ppmtotga', 'pbmtowbmp', 'pgmenhance', 'gnuplot', 'luac', 'jbigtopnm', 'pgmtosbig', 'cmake', 'enc265', 'ppmflash', 'opj_decompress', 'tiffdump', 'pamaddnoise', 'h5unjam', 'pbmtogem', 'ppmspread', 'ppmddumpfont', 'fc-pattern', 'mpiexec.hydra', 'ilbmtoppm', 'pbmtox10bm', 'pnmfile', 'aclocal-1.14', 'unxz', 'ppmdmkfont', 'qvoronoi', 'pbmtolps', 'hwloc-distrib', 'tiff2bw', 'cg_merge', 'pammasksharpen', 'jiv', 'freetype-config', 'pip3', 'exrmultipart', 'pgmnorm', 'gr2fonttest', 'sunicontopnm', 'exrmultiview', 'gdbus-codegen', 'fc-validate', 'pamtopdbimg', 'cjpeg', 'teacup', 'autom4te', 'ppmchange', 'h5stat', 'cmpfillin', 'easy_install-3.8', 'escp2topbm', 'jpegtran', 'h5ls', 'exrmaketiled', 'clang-format', 'lstopo', 'pbmminkowski', 'libpng16-config', 'heif-info', 'yuvtoppm', 'xzegrep', 'gsettings', 'VBoxManage', 'pngfix', 'zeisstopnm', 'vagrant', 'xmlto', 'glib-compile-schemas', 'webpmux', 'pamscale', 'pgmtopgm', 'fc-query', 'tiffcmp', 'pnmtopng', 'cameratopam', 'pnmtojpeg', 'gcov-tool-10', 'luac-5.3', 'yuvsplittoppm', 'rasttopnm', 'exr2aces', 'ppmtopjxl', 'tiff2pdf', 'pbmtoicon', 'pbmreduce', 'ppmdist', 'pamsistoaglyph', 'wish', 'pbmtozinc', 'unlzma', 'pgmtexture', 'pbmto4425', 'ppmdim', 'pbmpscale', 'ppmtopuzz', 'ybmtopbm', 'pbmtomgr', 'pbmtopi3', 'hdifftopam', 'pamexec', 'ppmtowinicon', 'pktopbm', 'pgmtolispm', 'x86_64-apple-darwin19-c++-10', 'fiascotopnm', 'pamdepth', 'update-mime-database', 'VBoxHeadless', 'hwloc-calc', 'gif2h5', 'pnmarith', 'pjtoppm', 'xzfgrep', 'sirtopnm', 'vgdb', 'webpinfo', 'gdtopng', 'hwloc-info', 'h5jam', 'libpng-config', 'pnmscalefixed', 'gdbm_dump', 'pbmtomda', 'fltk-config', 'pamtompfont', 'mkoctfile', 'gobject-query', 'brushtopbm', 'pnmsmooth', 'pnmenlarge', 'brew', 'pnmtopclxl', 'fstopgm', 'pgmdeshadow', 'plotfont', 'graph', 'ppmtopi1', 'ppmdcfont', 'h5cc', 'bmptopnm', 'pnminterp', 'g3topbm', 'cpp-10', 'pamgetcolor', 'pbmtoascii', 'pnmcrop', 'pnmtopalm', 'pamsplit', 'pbmlife', 'pamundice', 'xpmtoppm', 'rletopnm', 'pngtogd2', 'x86_64-apple-darwin19-gcc-ar-10', 'mpivars', 'msgen', 'sgitopnm', 'pbmtoepsi', 'sldtoppm', 'tclsh8.6', 'sndfile-metadata-set', 'pnmflip', 'eyuvtoppm', 'autoupdate', 'gs-X11', 'python3.8', 'pnmtosir', 'pambackground', 'rst2odt_prepstyles.py', 'manweb', 'pdbimgtopam', 'jpeg2ktopam', 'pnmtotiff', 'pamshadedrelief', 'mdatopbm', 'ppmtoeyuv', 'ppmntsc', 'djpeg', 'gs-X11-Yosemite', 'picttoppm', 'giftopnm', 'sndfile-salvage', 'pnmindex', 'pnmshear', 'pnmtile', 'annotate', 'msgmerge', 'pamtopnm', 'fftwf-wisdom', 'pamunlookup', 'pamlevels', 'tiffcrop', 'gs-noX11-Yosemite', 'neotoppm', 'wbmptopbm', 'pbmtobbnbg', 'h5mkgrp', 'pamrgbatopng', 'libtoolize', 'rlatopam', 'pgmramp', 'm2gmetis', 'pnmcomp', 'pamtooctaveimg', 'gio-querymodules', 'mpif77', 'pamtohtmltbl', 'pcdindex', 'ppmtoneo', 'fribidi', 'ppmtosixel', 'pnmtorast', 'h5format_convert', 'pnmhisteq', 'gemtopbm', 'idle3', 'cg_diff', 'mpmetis', 'gdcmpgif', 'envsubst', 'xz', 'ppmdither', 'pi1toppm', 'pampaintspill', 'spctoppm', 'cairo-trace', 'VirtualBox', 'x86_64-apple-darwin19-gcc-nm-10', 'pbmtomatrixorbital', 'gdparttopng', 'mgrtopbm', 'h5repack', 'fluid', 'ximtoppm', 'glib-compile-resources', 'pamtogif', 'ppmtoacad', 'vboxwebsrv', 'msginit', 'mongoose', 'rbox', 'lua', 'pamdice', 'macptopbm', 'pamtosvg', 'pbmtogo', 'VBoxDTrace', 'ppmtolj', 'ppmtoxpm', 'cg_annotate', 'x86_64-apple-darwin19-gcc-10.1.0', 'img2webp', 'mpichversion', 'hwloc-ls', 'pamstretch-gen', 'pbmmask', 'ppmglobe', 'tiffdither', 'sputoppm', 'mpicc', 'cmuwmtopbm', 'pelican-quickstart', 'gcc-10', 'fftw-wisdom', 'pngtopnm', 'pamstereogram', 'python3-config', 'f2py', 'qdelaunay', 'tiffset', 'tclsh', 'pamflip', 'pfmtopam', 'avstopam', 'tgatoppm', 'giftogd2', 'pbmtextps', 'pango-view', 'ppmpat', 'pamtoxvmini', 'hpcdtoppm', 'h5watch', 'pi3topbm', 'pbmtoepson', 'pnmnorm', 'ppmtobmp', 'tiff2ps', 'pnmtoxwd', 'pamcrater', 'pango-list', 'hb-ot-shape-closure', 'qrttoppm', 'heif-thumbnailer', 'ppmtoarbtxt', 'ppm3d', 'fig2dev', 'SophosUpdate', 'hwloc-patch', 'pamcomp', 'h5c++', 'lzless', 'cistopbm', 'pamedge', 'ode', 'valgrind-listener', 'octave-config', 'pbmtoatk', 'f2py3.7', 'ppmtoterm', 'vbox-img', 'tiffinfo', 'cairo-sphinx', 'ppmdraw', 'pnmconvol', 'octave', 'GraphicsMagick-config', 'pgmoil', 'gresource', 'flac', 'bioradtopgm', 'psidtopgm', 'heif-convert', 'pamtopfm', 'pamtojpeg2k', 'pamwipeout', 'pamsummcol', 'jpegtopnm', 'sndfile-concat', 'hipstopgm', 'ppmtopict', 'octave-5.2.0', 'graphchk', 'gettext', 'pnmcat', 'gpmetis', 'pgmminkowski', 'gtester-report', 'pc1toppm', 'pgmabel', 'atktopbm', 'ppmtogif', 'pbmclean', 'ppmrelief', 'gettext.sh', 'ctest', 'parkill', 'pamfixtrunc', 'epstool', 'xzless', 'pal2rgb', 'VBoxBalloonCtrl', 'exrmakepreview', 'msgcmp', 'lzcmp', 'pnmstitch', 'gd2topng', 'ppmtoicr', 'pygmentize', 'xzcat', 'pamhue', 'mrftopbm', 'spline', 'metaflac', 'pamthreshold', 'autoreconf', 'pamstack', 'VBoxAutostart', 'dbtoepub', 'gcc-nm-10', 'pbmtocmuwm', 'transicc', 'exrstdattr', 'sweep', 'wrjpgcom', 'mpicxx', 'pnmtofiasco', 'ppmquant', 'g++-10', 'autoconf', 'sndfile-deinterleave', 'pbmtoplot', 'qconvex', 'pbmmake', 'pnmtotiffcmyk', 'gcc-ar-10', 'pamtoavs', 'pbmtosunicon', 'pamsumm', 'pnmpsnr', 'h5diff', 'ppmtopgm', 'msgcat', 'pbmtopk', 'pgmbentley', 'autoheader', 'hwloc-gather-cpuid', 'pamendian', 'imginfo', 'rawtopgm', 'h5clear', 'psicc', 'pcretest', 'recode-sr-latin', 'glib-gettextize', 'xzcmp', 'GraphicsMagick++-config', 'pamtofits', 'gm', 'gouldtoppm', 'lzcat', 'double', 'pnmtorle', 'pamoil', 'pbmtoibm23xx', 'jpgicc', 'pydoc3.8', 'pgmmedian', 'hwloc-diff', 'yuv-distortion', 'sndfile-info', 'pammixinterlace', 'pbmtopsg3', 'lstopo-no-graphics', 'fc-cache', 'ppmtopj', 'pampop9', 'tclselect', 'pnmremap', 'hwloc-ps', 'gdbus', 'pcxtoppm', 'fc-cat', 'fftw-wisdom-to-conf', 'callgrind_annotate', 'ppmtospu', 'ppmcolors', 'ppmtoleaf', 'lzdiff', 'h5redeploy', 'pgmtost4', 'pnmtopnm', 'pgmedge', 'valgrind-di-server', 'pamvalidate', 'gdbmtool', 'sbigtopgm', 'msgexec', 'rst2xml.py', 'pelican-themes', 'pamtotiff', 'glib-genmarshal', 'pcre-config', 'ngettext', 'git-clang-format', 'ppmhist', 'qhalf', 'rst2odt.py', 'winicontoppm', 'h5debug', 'pgmmorphconv', 'pamlookup', 'gcov-10', 'dwebp', 'xbmtopbm', 'pic2tpic', 'ppmtoyuv', 'ppmtomap', 'texdistmgr', 'pgmcrater', 'ifnames', 'pnmalias', 'pnmcolormap', 'pammixmulti', 'pgmtopbm', 'pbmto10x', 'x86_64-apple-darwin19-g++-10', 'ppmtopcx', 'lua5.3', 'gd2copypal', 'ppmrough', 'ppmmake', 'x265', 'lzmadec', 'fax2ps', 'pnmmercator', 'rgb3toppm', 'fc-match', 'pnmgamma', 'infotopam', 'idle3.8', 'h5repart', 'lzgrep', 'msgunfmt', 'pnmtoplainpnm', 'pamdeinterlace', 'pamgradient', 'h5import', 'pnmsplit', 'tiffcp', 'lzmore', 'xvminitoppm', 'hydra_persist', 'pamfile', 'h5fc', 'mpiexec', 'pnmnlfilt', 'pamtouil', 'pamtodjvurle', 'pelican', 'pgmtofs', 'pngtogd', 'pnmmargin', 'pamchannel', 'pnmquantall', 'pbmtomacp', 'f2py3', 'pbmtext', 'sndfile-metadata-get', 'pnmpad', 'ppmwheel', 'exrenvmap', 'ppmlabel', 'thinkjettopbm', 'pnmquant', 'pbmupc', 'msgfilter', 'winicontopam', 'wftopfa', 'pamtosrf', 'pamditherbw', 'pbmtoptx', 'pgmnoise', 'pbmtolj', 'lzfgrep', 'pamarith', 'exrheader', 'rst2pseudoxml.py', 'python3.8-config', 'fc-conflist', 'glib-mkenums', 'xzmore', 'hersheydemo', 'hb-view', 'pnmdepth', 'pammosaicknit', 'ppmquantall', 'cwebp', 'sndfile-interleave', 'sndfile-convert', 'tiffmedian', 'ppmshift', 'yuy2topam', 'mpic++', 'pamenlarge', 'xzgrep', 'mpifort', 'pamgauss', 'rst2s5.py', 'pydoc3', 'pamtotga', 'hb-shape', 'valgrind', 'pbmtoln03', 'pstopnm', 'ppmtompeg', 'svgtopam', 'rst2html.py', 'hydra_nameserver', 'lzma', 'rst2man.py', 'gdbm_load', 'pamcut', 'jasper', 'gemtopnm', 'pbmtoybm', 'spottopgm', 'pamfix', 'pic2plot', 'st4topgm', 'sndfile-play', 'srftopam', 'pnmmontage', 'x86_64-apple-darwin19-gfortran-10', '2to3-3.8', 'rdjpgcom', 'ppmbrighten', 'automake', 'tek2plot', 'icontopbm', 'lzegrep', 'cpack', 'rd-curves', 'raw2tiff', 'pamtris', 'transfig', 'msgfmt', 'ppmtoapplevol', 'pgmtoppm', 'ppm2tiff', 'rstpep2html.py', 'xzdiff', 'msgattrib', 'imgcmp', 'pcregrep', 'tiff2rgba', 'x86_64-apple-darwin19-gcc-10', 'pamtopam', 'pamrubber', 'pamtowinicon', 'ppmtoascii', 'xgettext', 'hb-subset', 'ppmtv', 'ppmtomitsu', 'imgtoppm', 'gio', 'hwloc-annotate', 'xmlif', 'pamtopng', 'ppmnorm', 'ppmcolormask', 'pamtable', 'pnmscale', 'h5dump', '.keepme', 'ms_print', 'fc-scan', 'gettextize', 'pelican-import', 'VBoxVRDP', 'msguniq', 'bmptoppm', 'pnmtojbig', 'qhull', 'octave-config-5.2.0'] ['ndmetis', 'ppmtouil', 'pstoedit', 'lto-dump-10', 'lzmainfo', 'xwdtopnm', 'ppmtorgb3', 'pamtohdiff', 'pbmtoppa', 'ccmake', 'ppmtoyuvsplit', 'msgconv', 'pbmtonokia', 'leaftoppm', 'event_rpcgen.py', 'pnminvert', 'pkg-config', 'pbmpage', 'pnmrotate', 'bdftogd', 'hwloc-compress-dir', 'gen-enc-table', 'pgmslice', 'octave-cli-5.2.0', 'ppmshadow', 'anytopnm', 'asciitopgm', 'ppmtoppm', 'pgmkernel', 'tifftopnm', 'fig2ps2tex', 'msggrep', 'pbmtoescp2', 'ppmcie', 'libtool', 'ddbugtopbm', 'pgmhist', 'rawtoppm', 'webpng', 'sndfile-cmp', 'pnmcut', 'aclocal', 'pnmhistmap', 'palmtopnm', 'pamseq', 'glpsol', 'autopoint', 'mpif90', 'fitstopnm', 'pampick', 'hwloc-bind', 'pngtopam', 'pambrighten', 'ppmmix', 'tificc', 'pip3.8', 'pnmtofits', 'pamrecolor', 'pgmmake', 'pamaltsat', 'x86_64-apple-darwin19-gcc-ranlib-10', 'pbmtog3', 'gcc-ranlib-10', 'hydra_pmi_proxy', 'pbmtomrf', 'pamtilt', 'automake-1.14', 'pbmtodjvurle', 'octave-cli', 'h5copy', 'xzdec', 'luac5.3', 'tiffsplit', 'pambayer', 'ppmforge', 'font2c', 'pnmtosgi', 'ppmtojpeg', 'wheel3', 'mtvtoppm', 'pamstretch', 'h52gif', 'fax2tiff', 'pamfunc', 'pcdovtoppm', 'linkicc', 'rst2xetex.py', 'msgcomm', 'gdb', 'pnmnoraw', 'h5perf_serial', 'fc-list', 'pnmpaste', 'pamsharpness', 'opj_compress', 'GraphicsMagickWand-config', 'ppmtoilbm', 'mpirun', 'gs-noX11', 'heif-enc', 'lispmtopgm', 'gtester', 'ppmrainbow', 'bjoentegaard', 'pbmtopgm', 'pnmtops', 'pbmtocis', 'autoscan', 'callgrind_control', 'gd2togif', '411toppm', 'gfortran', 'opj_dump', '2to3', 'pbmtoxbm', 'fftwl-wisdom', 'lua-5.3', 'mkoctfile-5.2.0', 'ppmfade', 'pamperspective', 'python3', 'pnmtoddif', 'wish8.6', 'pamfind', 'plot', 'png-fix-itxt', 'gcov-dump-10', 'pamslice', 'rst2latex.py', 'gfortran-10', 'c++-10', 'pamsharpmap', 'ppmtotga', 'pbmtowbmp', 'pgmenhance', 'gnuplot', 'luac', 'jbigtopnm', 'pgmtosbig', 'cmake', 'enc265', 'ppmflash', 'opj_decompress', 'tiffdump', 'pamaddnoise', 'h5unjam', 'pbmtogem', 'ppmspread', 'ppmddumpfont', 'fc-pattern', 'mpiexec.hydra', 'ilbmtoppm', 'pbmtox10bm', 'pnmfile', 'aclocal-1.14', 'unxz', 'ppmdmkfont', 'qvoronoi', 'pbmtolps', 'hwloc-distrib', 'tiff2bw', 'cg_merge', 'pammasksharpen', 'jiv', 'freetype-config', 'pip3', 'exrmultipart', 'pgmnorm', 'gr2fonttest', 'sunicontopnm', 'exrmultiview', 'gdbus-codegen', 'fc-validate', 'pamtopdbimg', 'cjpeg', 'teacup', 'autom4te', 'ppmchange', 'h5stat', 'cmpfillin', 'easy_install-3.8', 'escp2topbm', 'jpegtran', 'h5ls', 'exrmaketiled', 'clang-format', 'lstopo', 'pbmminkowski', 'libpng16-config', 'heif-info', 'yuvtoppm', 'xzegrep', 'gsettings', 'VBoxManage', 'pngfix', 'zeisstopnm', 'vagrant', 'xmlto', 'glib-compile-schemas', 'webpmux', 'pamscale', 'pgmtopgm', 'fc-query', 'tiffcmp', 'pnmtopng', 'cameratopam', 'pnmtojpeg', 'gcov-tool-10', 'luac-5.3', 'yuvsplittoppm', 'rasttopnm', 'exr2aces', 'ppmtopjxl', 'tiff2pdf', 'pbmtoicon', 'pbmreduce', 'ppmdist', 'pamsistoaglyph', 'wish', 'pbmtozinc', 'unlzma', 'pgmtexture', 'pbmto4425', 'ppmdim', 'pbmpscale', 'ppmtopuzz', 'ybmtopbm', 'pbmtomgr', 'pbmtopi3', 'hdifftopam', 'pamexec', 'ppmtowinicon', 'pktopbm', 'pgmtolispm', 'x86_64-apple-darwin19-c++-10', 'fiascotopnm', 'pamdepth', 'update-mime-database', 'VBoxHeadless', 'hwloc-calc', 'gif2h5', 'pnmarith', 'pjtoppm', 'xzfgrep', 'sirtopnm', 'vgdb', 'webpinfo', 'gdtopng', 'hwloc-info', 'h5jam', 'libpng-config', 'pnmscalefixed', 'gdbm_dump', 'pbmtomda', 'fltk-config', 'pamtompfont', 'mkoctfile', 'gobject-query', 'brushtopbm', 'pnmsmooth', 'pnmenlarge', 'brew', 'pnmtopclxl', 'fstopgm', 'pgmdeshadow', 'plotfont', 'graph', 'ppmtopi1', 'ppmdcfont', 'h5cc', 'bmptopnm', 'pnminterp', 'g3topbm', 'cpp-10', 'pamgetcolor', 'pbmtoascii', 'pnmcrop', 'pnmtopalm', 'pamsplit', 'pbmlife', 'pamundice', 'xpmtoppm', 'rletopnm', 'pngtogd2', 'x86_64-apple-darwin19-gcc-ar-10', 'mpivars', 'msgen', 'sgitopnm', 'pbmtoepsi', 'sldtoppm', 'tclsh8.6', 'sndfile-metadata-set', 'pnmflip', 'eyuvtoppm', 'autoupdate', 'gs-X11', 'python3.8', 'pnmtosir', 'pambackground', 'rst2odt_prepstyles.py', 'manweb', 'pdbimgtopam', 'jpeg2ktopam', 'pnmtotiff', 'pamshadedrelief', 'mdatopbm', 'ppmtoeyuv', 'ppmntsc', 'djpeg', 'gs-X11-Yosemite', 'picttoppm', 'giftopnm', 'sndfile-salvage', 'pnmindex', 'pnmshear', 'pnmtile', 'annotate', 'msgmerge', 'pamtopnm', 'fftwf-wisdom', 'pamunlookup', 'pamlevels', 'tiffcrop', 'gs-noX11-Yosemite', 'neotoppm', 'wbmptopbm', 'pbmtobbnbg', 'h5mkgrp', 'pamrgbatopng', 'libtoolize', 'rlatopam', 'pgmramp', 'm2gmetis', 'pnmcomp', 'pamtooctaveimg', 'gio-querymodules', 'mpif77', 'pamtohtmltbl', 'pcdindex', 'ppmtoneo', 'fribidi', 'ppmtosixel', 'pnmtorast', 'h5format_convert', 'pnmhisteq', 'gemtopbm', 'idle3', 'cg_diff', 'mpmetis', 'gdcmpgif', 'envsubst', 'xz', 'ppmdither', 'pi1toppm', 'pampaintspill', 'spctoppm', 'cairo-trace', 'VirtualBox', 'x86_64-apple-darwin19-gcc-nm-10', 'pbmtomatrixorbital', 'gdparttopng', 'mgrtopbm', 'h5repack', 'fluid', 'ximtoppm', 'glib-compile-resources', 'pamtogif', 'ppmtoacad', 'vboxwebsrv', 'msginit', 'mongoose', 'rbox', 'lua', 'pamdice', 'macptopbm', 'pamtosvg', 'pbmtogo', 'VBoxDTrace', 'ppmtolj', 'ppmtoxpm', 'cg_annotate', 'x86_64-apple-darwin19-gcc-10.1.0', 'img2webp', 'mpichversion', 'hwloc-ls', 'pamstretch-gen', 'pbmmask', 'ppmglobe', 'tiffdither', 'sputoppm', 'mpicc', 'cmuwmtopbm', 'pelican-quickstart', 'gcc-10', 'fftw-wisdom', 'pngtopnm', 'pamstereogram', 'python3-config', 'f2py', 'qdelaunay', 'tiffset', 'tclsh', 'pamflip', 'pfmtopam', 'avstopam', 'tgatoppm', 'giftogd2', 'pbmtextps', 'pango-view', 'ppmpat', 'pamtoxvmini', 'hpcdtoppm', 'h5watch', 'pi3topbm', 'pbmtoepson', 'pnmnorm', 'ppmtobmp', 'tiff2ps', 'pnmtoxwd', 'pamcrater', 'pango-list', 'hb-ot-shape-closure', 'qrttoppm', 'heif-thumbnailer', 'ppmtoarbtxt', 'ppm3d', 'fig2dev', 'SophosUpdate', 'hwloc-patch', 'pamcomp', 'h5c++', 'lzless', 'cistopbm', 'pamedge', 'ode', 'valgrind-listener', 'octave-config', 'pbmtoatk', 'f2py3.7', 'ppmtoterm', 'vbox-img', 'tiffinfo', 'cairo-sphinx', 'ppmdraw', 'pnmconvol', 'octave', 'GraphicsMagick-config', 'pgmoil', 'gresource', 'flac', 'bioradtopgm', 'psidtopgm', 'heif-convert', 'pamtopfm', 'pamtojpeg2k', 'pamwipeout', 'pamsummcol', 'jpegtopnm', 'sndfile-concat', 'hipstopgm', 'ppmtopict', 'octave-5.2.0', 'graphchk', 'gettext', 'pnmcat', 'gpmetis', 'pgmminkowski', 'gtester-report', 'pc1toppm', 'pgmabel', 'atktopbm', 'ppmtogif', 'pbmclean', 'ppmrelief', 'gettext.sh', 'ctest', 'parkill', 'pamfixtrunc', 'epstool', 'xzless', 'pal2rgb', 'VBoxBalloonCtrl', 'exrmakepreview', 'msgcmp', 'lzcmp', 'pnmstitch', 'gd2topng', 'ppmtoicr', 'pygmentize', 'xzcat', 'pamhue', 'mrftopbm', 'spline', 'metaflac', 'pamthreshold', 'autoreconf', 'pamstack', 'VBoxAutostart', 'dbtoepub', 'gcc-nm-10', 'pbmtocmuwm', 'transicc', 'exrstdattr', 'sweep', 'wrjpgcom', 'mpicxx', 'pnmtofiasco', 'ppmquant', 'g++-10', 'autoconf', 'sndfile-deinterleave', 'pbmtoplot', 'qconvex', 'pbmmake', 'pnmtotiffcmyk', 'gcc-ar-10', 'pamtoavs', 'pbmtosunicon', 'pamsumm', 'pnmpsnr', 'h5diff', 'ppmtopgm', 'msgcat', 'pbmtopk', 'pgmbentley', 'autoheader', 'hwloc-gather-cpuid', 'pamendian', 'imginfo', 'rawtopgm', 'h5clear', 'psicc', 'pcretest', 'recode-sr-latin', 'glib-gettextize', 'xzcmp', 'GraphicsMagick++-config', 'pamtofits', 'gm', 'gouldtoppm', 'lzcat', 'double', 'pnmtorle', 'pamoil', 'pbmtoibm23xx', 'jpgicc', 'pydoc3.8', 'pgmmedian', 'hwloc-diff', 'yuv-distortion', 'sndfile-info', 'pammixinterlace', 'pbmtopsg3', 'lstopo-no-graphics', 'fc-cache', 'ppmtopj', 'pampop9', 'tclselect', 'pnmremap', 'hwloc-ps', 'gdbus', 'pcxtoppm', 'fc-cat', 'fftw-wisdom-to-conf', 'callgrind_annotate', 'ppmtospu', 'ppmcolors', 'ppmtoleaf', 'lzdiff', 'h5redeploy', 'pgmtost4', 'pnmtopnm', 'pgmedge', 'valgrind-di-server', 'pamvalidate', 'gdbmtool', 'sbigtopgm', 'msgexec', 'rst2xml.py', 'pelican-themes', 'pamtotiff', 'glib-genmarshal', 'pcre-config', 'ngettext', 'git-clang-format', 'ppmhist', 'qhalf', 'rst2odt.py', 'winicontoppm', 'h5debug', 'pgmmorphconv', 'pamlookup', 'gcov-10', 'dwebp', 'xbmtopbm', 'pic2tpic', 'ppmtoyuv', 'ppmtomap', 'texdistmgr', 'pgmcrater', 'ifnames', 'pnmalias', 'pnmcolormap', 'pammixmulti', 'pgmtopbm', 'pbmto10x', 'x86_64-apple-darwin19-g++-10', 'ppmtopcx', 'lua5.3', 'gd2copypal', 'ppmrough', 'ppmmake', 'x265', 'lzmadec', 'fax2ps', 'pnmmercator', 'rgb3toppm', 'fc-match', 'pnmgamma', 'infotopam', 'idle3.8', 'h5repart', 'lzgrep', 'msgunfmt', 'pnmtoplainpnm', 'pamdeinterlace', 'pamgradient', 'h5import', 'pnmsplit', 'tiffcp', 'lzmore', 'xvminitoppm', 'hydra_persist', 'pamfile', 'h5fc', 'mpiexec', 'pnmnlfilt', 'pamtouil', 'pamtodjvurle', 'pelican', 'pgmtofs', 'pngtogd', 'pnmmargin', 'pamchannel', 'pnmquantall', 'pbmtomacp', 'f2py3', 'pbmtext', 'sndfile-metadata-get', 'pnmpad', 'ppmwheel', 'exrenvmap', 'ppmlabel', 'thinkjettopbm', 'pnmquant', 'pbmupc', 'msgfilter', 'winicontopam', 'wftopfa', 'pamtosrf', 'pamditherbw', 'pbmtoptx', 'pgmnoise', 'pbmtolj', 'lzfgrep', 'pamarith', 'exrheader', 'rst2pseudoxml.py', 'python3.8-config', 'fc-conflist', 'glib-mkenums', 'xzmore', 'hersheydemo', 'hb-view', 'pnmdepth', 'pammosaicknit', 'ppmquantall', 'cwebp', 'sndfile-interleave', 'sndfile-convert', 'tiffmedian', 'ppmshift', 'yuy2topam', 'mpic++', 'pamenlarge', 'xzgrep', 'mpifort', 'pamgauss', 'rst2s5.py', 'pydoc3', 'pamtotga', 'hb-shape', 'valgrind', 'pbmtoln03', 'pstopnm', 'ppmtompeg', 'svgtopam', 'rst2html.py', 'hydra_nameserver', 'lzma', 'rst2man.py', 'gdbm_load', 'pamcut', 'jasper', 'gemtopnm', 'pbmtoybm', 'spottopgm', 'pamfix', 'pic2plot', 'st4topgm', 'sndfile-play', 'srftopam', 'pnmmontage', 'x86_64-apple-darwin19-gfortran-10', '2to3-3.8', 'rdjpgcom', 'ppmbrighten', 'automake', 'tek2plot', 'icontopbm', 'lzegrep', 'cpack', 'rd-curves', 'raw2tiff', 'pamtris', 'transfig', 'msgfmt', 'ppmtoapplevol', 'pgmtoppm', 'ppm2tiff', 'rstpep2html.py', 'xzdiff', 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'rails', 'bspatch', 'RezDet', 'hotspot.d', 'cvaffinity', 'gatherheaderdoc', 'ppdi', 'pcap-config', 'avmetareadwrite', 'update_dyld_shared_cache_root_mode', 'gen_bridge_metadata', 'gem', 'opendiff', 'h2xs5.18', 'talk', 'expect', 'jimage', 'lockstat', 'dapptrace', 'install-info', 'xattr', 'w', 'gunzip'] ['cat', 'echo', 'launchctl', 'df', 'pwd', 'test', 'csh', 'wait4path', 'unlink', 'sleep', 'stty', 'date', 'ed', 'expr', 'pax', 'bash', 'kill', 'sh', 'ps', 'link', 'tcsh', 'dd', 'mkdir', 'ksh', 'hostname', 'dash', 'rmdir', 'mv', 'ln', 'ls', 'cp', 'sync', 'zsh', 'chmod', 'rm', '['] ['dsconfigad', 'htdbm', 'netbiosd', 'postlock', 'systemsoundserverd', 'dseditgroup', 'avbdeviced', 'rpcinfo', 'BootCacheControl', 'weakpass_edit', 'periodic', 'accton', 'wfsctl', 'postalias', 'slapacl', 'edquota', 'sndiskmove', 'pdisk', 'amt', 'lpadmin', 'fdisk', 'sysadminctl', 'networksetup', 'envvars', 'ktutil', 'setquota', 'otctl', 'sncfgvalidate', 'php-fpm', 'AppleFileServer', 'dnctl', 'mDNSResponder', 'repquota', 'cupsfilter', 'checkgid', 'uuconv', 'sharing', 'vifs', 'ac', 'racoon', 'dsenableroot', 'xsanctl', 'kdcsetup', 'aslmanager', 'screencapture', 'htdigest', 'rtsold', 'chat', 'DevToolsSecurity', 'logresolve', 'cvdbset', 'KernelEventAgent', 'gpt', 'scutil', 'ioreg', 'ab', 'traceroute6', 'pwd_mkdb', 'sysctl', 'appsleepd', 'sshd', 'mDNSResponderHelper', 'authserver', 'sncfginstall', 'postmulti', 'lsof', 'pkgutil', 'slapindex', 'sc_auth', 'ioclasscount', 'uucico', 'firmwarepasswd', 'rarpd', 'tsig-keygen', 'kadmin.local', 'syslogd', 'taskpolicy', 'filecoordinationd', 'dot_clean', 'PasswordService', 'systemsetup', 'zdump', 'snmpd', 'ndp', 'coreaudiod', 'rpcbind', 'praudit', 'usernoted', 'postkick', 'postcat', 'netstat', 'lpc', 'slapadd', 'krbservicesetup', 'sncfgtemplate', 'slapconfig', 'rtadvd', 'httxt2dbm', 'distnoted', 'mtree', 'cupsdisable', 'lpmove', 'disktool', 'purge', 'rpc.statd', 'cupsctl', 'DirectoryService', 'notifyd', 'klist_cdhashes', 'dtrace', 'kextcache', 'cupsd', 'dbmmanage', 'languagesetup', 'skywalkctl', 'mkpassdb', 'postconf', 'createhomedir', 'ocspd', 'iostat', 'cvdb', 'sa', 'rpc.lockd', 'uuxqt', 'mkfile', 'softwareupdate', 'unsetpassword', 'zic', 'nfs4mapid', 'postsuper', 'htpasswd', 'rotatelogs', 'universalaccessd', 'audit', 'httpd', 'bluetoothaudiod', 'slapauth', 'slappasswd', 'localemanager', 'asr', 'cvupdatefs', 'bless', 'cvgather', 'xscertadmin', 'visudo', 'uusched', 'dsconfigldap', 'smbdiagnose', 'cfprefsd', 'auditd', 'uuchk', 'cvfsck', 'kextfind', 'diskutil', 'cvfsid', 'sso_util', 'vsdbutil', 'ddns-confgen', 'ioalloccount', 'uasysdiagnose', 'dev_mkdb', 'hdik', 'slapdn', 'vpnd', 'postqueue', 'setkey', 'tpctl', 'repairHomePermissions', 'spindump', 'cupsreject', 'traceroute', 'quotaoff', 'newsyslog', 'postfix', 'cvfsdb', 'snmptrapd', 'chroot', 'arp', 'cupsaccept', 'nvram', 'chown', 'mkextunpack', 'sncfgremove', 'sncfgquery', 'postlog', 'installer', 'pppd', 'httpd-wrapper', 'system_profiler', 'fcgistarter', 'bluetoothd', 'slapschema', 'kadmin', 'spray', 'cvversions', 'kextlibs', 'tcpdump', 'xartutil', 'securityd', 'nlcontrol', 'quotaon', 'spctl', 'vipw', 'gssd', 'slaptest', 'automount', 'scselect', 'envvars-std', 'graphicssession', 'ckksctl', 'lpinfo', 'smbd', 'serverinfo', 'cvmkfs', 'postmap', 'postdrop', 'cupsenable', 'cron', 'systemstats', 'bnepd', 'kextstat', 'cvlabel', 'sendmail', 'systemkeychain', 'kcditto', 'slapcat', 'ipconfig', 'auditreduce', 'cvadmin', 'WirelessRadioManagerd', 'apachectl', 'htcacheclean'] ['mount_hfs', 'mount_apfs', 'md5', 'fsck', 'mount_udf', 'quotacheck', 'mount_cd9660', 'ping', 'fsck_exfat', 'mount_exfat', 'fsck_udf', 'shutdown', 'route', 'mount_webdav', 'fsck_hfs', 'nfsd', 'reboot', 'nfsiod', 'fsck_cs', 'fsck_apfs', 'fstyp_msdos', 'disklabel', 'mount_msdos', 'fsck_msdos', 'ifconfig', 'halt', 'mount_9p', 'mount_ntfs', 'rtsol', 'newfs_apfs', 'umount', 'fstyp', 'kextunload', 'mpioutil', 'fstyp_ntfs', 'emond', 'mount_nfs', 'newfs_udf', 'mount_ftp', 'pfctl', 'mknod', 'fstyp_udf', 'dmesg', 'mount', 'fibreconfig', 'fstyp_hfs', 'newfs_hfs', 'dynamic_pager', 'launchd', 'newfs_exfat', 'apfs_hfs_convert', 'nologin', 'mount_afp', 'mount_smbfs', 'ping6', 'kextload', 'mount_cddafs', 'mount_fdesc', 'newfs_msdos', 'mount_acfs', 'mount_devfs'] ['luajittex', 'lollipop', 't1disasm', 'chktex', 'rubikrotation', 'lily-rebuild-pdfs', 'weave', 'mag', 'man', 'ebb', 'prepmx', 'mktexlsr', 'gsftopk', 'upmendex', 'dvibook', 'kpsewhere', 'rumakeindex', 'fontinst', 'cef5conv', 'lacheck', 'httexi', 'lily-image-commands', 'texloganalyser', 'dvilj', 'patgen', 'uptex', 'exceltex', 'pdvitype', 'texconfig-sys', 'xmltex', 'vlna', 'texsis', 'dvipdft', 'pdfjam-pocketmod', 'urlbst', 'pdfcslatex', 'afm2afm', 'cefconv', 'pdfjam-slides6up', 'sjisconv', 'tex2xindy', 'musixtex', 'pdfcsplain', 'opl2ofm', 'de-macro', 'bbl2bib', 'ltx2crossrefxml', 'pdftex', 'r-mpost', 'dvitodvi', 'gftodvi', 'dviconcat', 'texluajitc', 'dvipng', 'komkindex', 'tex', 'sty2dtx', 'ppltotf', 'yplan', 'eplain', 'eptex', 'lily-glyph-commands', 'htmex', 'texlua', 'htxelatex', 'xasy', 'fmtutil-user', 'wovp2ovf', 'dvilualatex', 'cefsconv', 'context', 'platex', 'allec', 'adhocfilelist', 'kpsetool', 'makejvf', 'texdoctk', 'vptovf', 'tex4ht', 'texluajit', 'mtxrunjit', 'uplatex', 'musixflx', 'pfarrei', 'mf', 'latexdiff-vc', 'ttfdump', 'etex', 'fig4latex', 'bibexport', 'ttf2tfm', 'latexmk', 'pmpost', 'ctwill', 'pst2pdf', 'wordcount', 'pdfbook', 'texconfig-dialog', 'lwarpmk', 'dvilj2p', 'dviinfox', 'ttf2kotexfont', 'ctanbib', 'cweave', 'bg5+latex', 'pdfatfi', 'ptex2pdf', 'e2pall', 'kpsewhich', 'upbibtex', 'texdiff', 'mathspic', 'kanji-fontmap-creator', 'kanji-config-updmap', 'asy', 'typeoutfileinfo', 'upmpost', 'pdflatex', 'perltex', 'mkt1font', 'cefslatex', 'cjk-gs-integrate', 'chkdvifont', 'dvitype', 'pdfjadetex', 't1lint', 'jamo-normalize', 'fmtutil-sys', 'wofm2opl', 'dviasm', 'kpsestat', 'pdfxup', 'makedtx', 'pltotf', 'mkindex', 'dvilj6', 'r-pmpost', 'xindy.mem', 'xetex', 'latex', 'ps4pdf', 'multibibliography', 'teckit_compile', 'ttf2afm', 'biburl2doi', 'getmapdl', 'uptftopl', 'contextjit', 'bib2gls', 'match_parens', 'mkjobtexmf', 'pdf90', 'updvitomp', 'ps2eps', 'pkfix-helper', 'chkweb', 'arlatex', 'pdfpun', 'pn2pdf', 'pdfclose', 'xindex', 'clxelatex', 'dosepsbin', 'jadetex', 'a2ping', 'bibzbladd', 'ovf2ovp', 'mfluajit-nowin', 'mpost', 'texosquery-jre5', 'texhash', 'convbkmk', 'thumbpdf', 'pkfix', 'dvihp', 'hbf2gf', 'xindy.run', 'texcount', 'pdf180', 'texmfstart', 'latexrevise', 'cefpdflatex', 'texluac', 'dvicopy', 'lua2dox_filter', 'ctie', 'pdftex-quiet', 'euptex', 'pdftosrc', 'mf-nowin', 'ctangle', 'omfonts', 't1asm', 'mflua-nowin', 'cluttex', 'svn-multi', 'mk4ht', 'afm2tfm', 'pdfopen', 'fragmaster', 'pdfnup', 'ebong', 'ctanify', 'pygmentex', 'texdef', 'luatex', 'cslatex', 'synctex', 'texdirflatten', 'gbkpdflatex', 'xdvipdfmx', 'sjispdflatex', 'makeindex', 'dviluatex', 'mkofm', 'dvipdfmx', 'psbook', 'dvispc', 'csplain', 'ttftotype42', 'mft', 't1rawafm', 'fmtutil', 'ctwill-twinx', 'simpdftex', 'depythontex', 'otfinfo', 'latexindent', 'kanji-config-updmap-sys', 'extconv', 'disdvi', 'pdvitomp', 'dvipdfm', 'texliveonfly', 'allneeded', 'htcontext', 't1testpage', 'biber', 'dv2dt', 'xindy', 'pdfbook2', 't1unmac', 'xelatex', 'webquiz', 'kpsepath', 'diadia', 'makeglossaries', 'cef5pdflatex', 'autoinst', 'mkpic', 'splitindex', 'repstopdf', 'otangle', 'mfplain', 'latexfileversion', 'latex-git-log', 'inimf', 'latex2man', 'ps2pk', 'htxetex', 'l3build', 'ptftopl', 'ptex', 'gbklatex', 't1binary', 'bibtex', 't1dotlessj', 'mktexpk', 'detex', 'htlatex', 'odvicopy', 'dvidvi', 'extractres', 'extractbb', 'tie', 'latexdef', 'tlmgr', 'arara', 'ctan-o-mat', 'rubibtex', 'dvigif', 'gftype', 'ketcindy', 'kpseaccess', 'luacsplain', 'cachepic', 'srcredact', 'dtxgen', 'mmafm', 'pktype', 'kpsexpand', 'pktogf', 'msxlint', 't1reencode', 'vftovp', 'xhlatex', 'ht', 'pdf270', 'mendex', 'make4ht', 'ceflatex', 'texlinks', 'pmxchords', 'mptopdf', 'afm2pl', 'mktexmf', 'lamed', 'gftopk', 'ulqda', 'dvilj4l', 'pooltype', 'pdfjoin', 'bg5latex', 'bibmradd', 'aleph', 'wovf2ovp', 'pdfetex', 'dvi2tty', 'ofm2opl', 'pslatex', 'initex', 'latexpand', 'mkgrkindex', 'mtxrun', 'epsffit', 'listings-ext.sh', 'mktexfmt', 'scor2prt', 'psnup', 'ot2kpx', 'allcm', 'pk2bm', 'dvitomp', 'texindy', 'vpl2vpl', 'luatools', 'cef5latex', 'ctwill-refsort', 'bg5+pdflatex', 'dvisvgm', 'tex2aspc', 'bg5conv', 'deweb', 'tlcockpit', 'cfftot1', 'dviselect', 'odvitype', 'vpl2ovp', 'otp2ocp', 'latexdiff', 'dt2dv', 'bg5pdflatex', 'mf2pt1', 'psresize', 't1mac', 'epspdf', 'pythontex', 'bibtexu', 'authorindex', 'texosquery', 'tlshell', 'pdfxmltex', 'pdfjam-slides3up', 'includeres', 't1ascii', 'pdflatexpicscale', 'mfluajit', 'axohelp', 'tangle', 'httex', 'texosquery-jre8', 'checkcites', 'bibtex8', 'dvi2fax', 'otftotfm', 'cefspdflatex', 'mmpfb', 'pfb2pfa', 'vpe', 'psselect', 'findhyph', 'gregorio', 'ovp2ovf', 'utf8mex', 'mflua', 'purifyeps', 'autosp', 'bundledoc', 'mllatex', 'tex4ebook', 'xdvi-xaw', 'sjislatex', 'rungs', 'dvilj4', 'ltxfileinfo', 'texconfig', 'updvitype', 'ltximg', 'updmap-user', 'dvips', 'convertgls2bib', 'latex2nemeth', 'pdfjam', 'epstopdf', 'outocp', 'pedigree', 'mkocp', 'kpsereadlink', 'ttf2pk', 'tpic2pdftex', 'kanji-config-updmap-user', 'psjoin', 'm-tx', 'uppltotf', 'texdoc', 'bbox', 'dvired', 'latex-papersize', 'makeglossaries-lite', 't4ht', 'xdvi', 'ps2frag', 'wopl2ofm', 'devnag', 'ctanupload', 'texexec', 'listbib', 'cllualatex', 'lualatex', 'pmxab', 'jfmutil', 'pdfmex', 'tftopl', 'mltex', 'amstex', 'pbibtex', 'pstops', 'mex', 'bibdoiadd', 'pdfflip', 'updmap', 'dvipos', 'luaotfload-tool', 'epspdftk', 'updmap-sys', 'r-upmpost', 'mktextfm', 'texfot', 'checklistings', 'rpdfcrop', 'a5toa4', 'installfont-tl', 'pdfcrop', 'pdfannotextractor'] ['xfs', 'xfsinfo', 'atobm', 'xdpyinfo', 'showrgb', 'xlsfonts', 'editres', 'fonttosfnt', 'xfontsel', 'xclock', 'xmore', 'xman', 'xmag', 'xrefresh', 'fc-list', 'xdmshell', 'xauth', 'twm', 'cxpm', 'mkfontdir', 'xclipboard', 'png-fix-itxt', 'ucs2any', 'xterm', 'bdftruncate', 'xsetroot', 'xmessage', 'xcursorgen', 'fc-pattern', 'xkbvleds', 'xkbbell', 'freetype-config', 'Xephyr', 'fc-validate', 'bitmap', 'libpng16-config', 'pngfix', 'fc-query', 'xkbprint', 'luit', 'xhost', 'gtf', 'listres', 'x11perf', 'Xorg', 'libpng-config', 'koi8rxterm', 'xpr', 'xstdcmap', 'xgc', 'mkfontscale', 'setxkbmap', 'xinit', 'Xquartz', 'xbacklight', 'xdm', 'xcmsdb', 'xdpr', 'xfindproxy', 'xrdb', 'xlsclients', 'xprop', 'xkeystone', 'xeyes', 'Xvfb', 'Xnest', 'xev', 'startx', 'xkbwatch', 'xscope', 'xfd', 'sessreg', 'xwud', 'lndir', 'xinput', 'xconsole', 'glxinfo', 'sxpm', 'xsetmode', 'Xfake', 'fslsfonts', 'xcompmgr', 'xrandr', 'bmtoa', 'xwd', 'xmodmap', 'glxgears', 'fc-cache', 'iceauth', 'cvt', 'xcutsel', 'bdftopcf', 'fc-cat', 'xsetpointer', 'xkbevd', 'quartz-wm', 'xsm', 'appres', 'xset', 'xlsatoms', 'fc-match', 'oclock', 'x11perfcomp', 'resize', 'showfont', 'xditview', 'xwininfo', 'xvinfo', 'xcalc', 'xgamma', 'makedepend', 'viewres', 'ico', 'X', 'gccmakedep', 'xedit', 'smproxy', 'xkill', 'xkbcomp', 'xload', 'font_cache', 'xmh', 'xlogo', 'fstobdf', 'uxterm', 'fc-scan'] ['rvictl'] ['ndmetis', 'ppmtouil', 'pstoedit', 'lto-dump-10', 'lzmainfo', 'xwdtopnm', 'ppmtorgb3', 'pamtohdiff', 'pbmtoppa', 'ccmake', 'ppmtoyuvsplit', 'msgconv', 'pbmtonokia', 'leaftoppm', 'event_rpcgen.py', 'pnminvert', 'pkg-config', 'pbmpage', 'pnmrotate', 'bdftogd', 'hwloc-compress-dir', 'gen-enc-table', 'pgmslice', 'octave-cli-5.2.0', 'ppmshadow', 'anytopnm', 'asciitopgm', 'ppmtoppm', 'pgmkernel', 'tifftopnm', 'fig2ps2tex', 'msggrep', 'pbmtoescp2', 'ppmcie', 'libtool', 'ddbugtopbm', 'pgmhist', 'rawtoppm', 'webpng', 'sndfile-cmp', 'pnmcut', 'aclocal', 'pnmhistmap', 'palmtopnm', 'pamseq', 'glpsol', 'autopoint', 'mpif90', 'fitstopnm', 'pampick', 'hwloc-bind', 'pngtopam', 'pambrighten', 'ppmmix', 'tificc', 'pip3.8', 'pnmtofits', 'pamrecolor', 'pgmmake', 'pamaltsat', 'x86_64-apple-darwin19-gcc-ranlib-10', 'pbmtog3', 'gcc-ranlib-10', 'hydra_pmi_proxy', 'pbmtomrf', 'pamtilt', 'automake-1.14', 'pbmtodjvurle', 'octave-cli', 'h5copy', 'xzdec', 'luac5.3', 'tiffsplit', 'pambayer', 'ppmforge', 'font2c', 'pnmtosgi', 'ppmtojpeg', 'wheel3', 'mtvtoppm', 'pamstretch', 'h52gif', 'fax2tiff', 'pamfunc', 'pcdovtoppm', 'linkicc', 'rst2xetex.py', 'msgcomm', 'gdb', 'pnmnoraw', 'h5perf_serial', 'fc-list', 'pnmpaste', 'pamsharpness', 'opj_compress', 'GraphicsMagickWand-config', 'ppmtoilbm', 'mpirun', 'gs-noX11', 'heif-enc', 'lispmtopgm', 'gtester', 'ppmrainbow', 'bjoentegaard', 'pbmtopgm', 'pnmtops', 'pbmtocis', 'autoscan', 'callgrind_control', 'gd2togif', '411toppm', 'gfortran', 'opj_dump', '2to3', 'pbmtoxbm', 'fftwl-wisdom', 'lua-5.3', 'mkoctfile-5.2.0', 'ppmfade', 'pamperspective', 'python3', 'pnmtoddif', 'wish8.6', 'pamfind', 'plot', 'png-fix-itxt', 'gcov-dump-10', 'pamslice', 'rst2latex.py', 'gfortran-10', 'c++-10', 'pamsharpmap', 'ppmtotga', 'pbmtowbmp', 'pgmenhance', 'gnuplot', 'luac', 'jbigtopnm', 'pgmtosbig', 'cmake', 'enc265', 'ppmflash', 'opj_decompress', 'tiffdump', 'pamaddnoise', 'h5unjam', 'pbmtogem', 'ppmspread', 'ppmddumpfont', 'fc-pattern', 'mpiexec.hydra', 'ilbmtoppm', 'pbmtox10bm', 'pnmfile', 'aclocal-1.14', 'unxz', 'ppmdmkfont', 'qvoronoi', 'pbmtolps', 'hwloc-distrib', 'tiff2bw', 'cg_merge', 'pammasksharpen', 'jiv', 'freetype-config', 'pip3', 'exrmultipart', 'pgmnorm', 'gr2fonttest', 'sunicontopnm', 'exrmultiview', 'gdbus-codegen', 'fc-validate', 'pamtopdbimg', 'cjpeg', 'teacup', 'autom4te', 'ppmchange', 'h5stat', 'cmpfillin', 'easy_install-3.8', 'escp2topbm', 'jpegtran', 'h5ls', 'exrmaketiled', 'clang-format', 'lstopo', 'pbmminkowski', 'libpng16-config', 'heif-info', 'yuvtoppm', 'xzegrep', 'gsettings', 'VBoxManage', 'pngfix', 'zeisstopnm', 'vagrant', 'xmlto', 'glib-compile-schemas', 'webpmux', 'pamscale', 'pgmtopgm', 'fc-query', 'tiffcmp', 'pnmtopng', 'cameratopam', 'pnmtojpeg', 'gcov-tool-10', 'luac-5.3', 'yuvsplittoppm', 'rasttopnm', 'exr2aces', 'ppmtopjxl', 'tiff2pdf', 'pbmtoicon', 'pbmreduce', 'ppmdist', 'pamsistoaglyph', 'wish', 'pbmtozinc', 'unlzma', 'pgmtexture', 'pbmto4425', 'ppmdim', 'pbmpscale', 'ppmtopuzz', 'ybmtopbm', 'pbmtomgr', 'pbmtopi3', 'hdifftopam', 'pamexec', 'ppmtowinicon', 'pktopbm', 'pgmtolispm', 'x86_64-apple-darwin19-c++-10', 'fiascotopnm', 'pamdepth', 'update-mime-database', 'VBoxHeadless', 'hwloc-calc', 'gif2h5', 'pnmarith', 'pjtoppm', 'xzfgrep', 'sirtopnm', 'vgdb', 'webpinfo', 'gdtopng', 'hwloc-info', 'h5jam', 'libpng-config', 'pnmscalefixed', 'gdbm_dump', 'pbmtomda', 'fltk-config', 'pamtompfont', 'mkoctfile', 'gobject-query', 'brushtopbm', 'pnmsmooth', 'pnmenlarge', 'brew', 'pnmtopclxl', 'fstopgm', 'pgmdeshadow', 'plotfont', 'graph', 'ppmtopi1', 'ppmdcfont', 'h5cc', 'bmptopnm', 'pnminterp', 'g3topbm', 'cpp-10', 'pamgetcolor', 'pbmtoascii', 'pnmcrop', 'pnmtopalm', 'pamsplit', 'pbmlife', 'pamundice', 'xpmtoppm', 'rletopnm', 'pngtogd2', 'x86_64-apple-darwin19-gcc-ar-10', 'mpivars', 'msgen', 'sgitopnm', 'pbmtoepsi', 'sldtoppm', 'tclsh8.6', 'sndfile-metadata-set', 'pnmflip', 'eyuvtoppm', 'autoupdate', 'gs-X11', 'python3.8', 'pnmtosir', 'pambackground', 'rst2odt_prepstyles.py', 'manweb', 'pdbimgtopam', 'jpeg2ktopam', 'pnmtotiff', 'pamshadedrelief', 'mdatopbm', 'ppmtoeyuv', 'ppmntsc', 'djpeg', 'gs-X11-Yosemite', 'picttoppm', 'giftopnm', 'sndfile-salvage', 'pnmindex', 'pnmshear', 'pnmtile', 'annotate', 'msgmerge', 'pamtopnm', 'fftwf-wisdom', 'pamunlookup', 'pamlevels', 'tiffcrop', 'gs-noX11-Yosemite', 'neotoppm', 'wbmptopbm', 'pbmtobbnbg', 'h5mkgrp', 'pamrgbatopng', 'libtoolize', 'rlatopam', 'pgmramp', 'm2gmetis', 'pnmcomp', 'pamtooctaveimg', 'gio-querymodules', 'mpif77', 'pamtohtmltbl', 'pcdindex', 'ppmtoneo', 'fribidi', 'ppmtosixel', 'pnmtorast', 'h5format_convert', 'pnmhisteq', 'gemtopbm', 'idle3', 'cg_diff', 'mpmetis', 'gdcmpgif', 'envsubst', 'xz', 'ppmdither', 'pi1toppm', 'pampaintspill', 'spctoppm', 'cairo-trace', 'VirtualBox', 'x86_64-apple-darwin19-gcc-nm-10', 'pbmtomatrixorbital', 'gdparttopng', 'mgrtopbm', 'h5repack', 'fluid', 'ximtoppm', 'glib-compile-resources', 'pamtogif', 'ppmtoacad', 'vboxwebsrv', 'msginit', 'mongoose', 'rbox', 'lua', 'pamdice', 'macptopbm', 'pamtosvg', 'pbmtogo', 'VBoxDTrace', 'ppmtolj', 'ppmtoxpm', 'cg_annotate', 'x86_64-apple-darwin19-gcc-10.1.0', 'img2webp', 'mpichversion', 'hwloc-ls', 'pamstretch-gen', 'pbmmask', 'ppmglobe', 'tiffdither', 'sputoppm', 'mpicc', 'cmuwmtopbm', 'pelican-quickstart', 'gcc-10', 'fftw-wisdom', 'pngtopnm', 'pamstereogram', 'python3-config', 'f2py', 'qdelaunay', 'tiffset', 'tclsh', 'pamflip', 'pfmtopam', 'avstopam', 'tgatoppm', 'giftogd2', 'pbmtextps', 'pango-view', 'ppmpat', 'pamtoxvmini', 'hpcdtoppm', 'h5watch', 'pi3topbm', 'pbmtoepson', 'pnmnorm', 'ppmtobmp', 'tiff2ps', 'pnmtoxwd', 'pamcrater', 'pango-list', 'hb-ot-shape-closure', 'qrttoppm', 'heif-thumbnailer', 'ppmtoarbtxt', 'ppm3d', 'fig2dev', 'SophosUpdate', 'hwloc-patch', 'pamcomp', 'h5c++', 'lzless', 'cistopbm', 'pamedge', 'ode', 'valgrind-listener', 'octave-config', 'pbmtoatk', 'f2py3.7', 'ppmtoterm', 'vbox-img', 'tiffinfo', 'cairo-sphinx', 'ppmdraw', 'pnmconvol', 'octave', 'GraphicsMagick-config', 'pgmoil', 'gresource', 'flac', 'bioradtopgm', 'psidtopgm', 'heif-convert', 'pamtopfm', 'pamtojpeg2k', 'pamwipeout', 'pamsummcol', 'jpegtopnm', 'sndfile-concat', 'hipstopgm', 'ppmtopict', 'octave-5.2.0', 'graphchk', 'gettext', 'pnmcat', 'gpmetis', 'pgmminkowski', 'gtester-report', 'pc1toppm', 'pgmabel', 'atktopbm', 'ppmtogif', 'pbmclean', 'ppmrelief', 'gettext.sh', 'ctest', 'parkill', 'pamfixtrunc', 'epstool', 'xzless', 'pal2rgb', 'VBoxBalloonCtrl', 'exrmakepreview', 'msgcmp', 'lzcmp', 'pnmstitch', 'gd2topng', 'ppmtoicr', 'pygmentize', 'xzcat', 'pamhue', 'mrftopbm', 'spline', 'metaflac', 'pamthreshold', 'autoreconf', 'pamstack', 'VBoxAutostart', 'dbtoepub', 'gcc-nm-10', 'pbmtocmuwm', 'transicc', 'exrstdattr', 'sweep', 'wrjpgcom', 'mpicxx', 'pnmtofiasco', 'ppmquant', 'g++-10', 'autoconf', 'sndfile-deinterleave', 'pbmtoplot', 'qconvex', 'pbmmake', 'pnmtotiffcmyk', 'gcc-ar-10', 'pamtoavs', 'pbmtosunicon', 'pamsumm', 'pnmpsnr', 'h5diff', 'ppmtopgm', 'msgcat', 'pbmtopk', 'pgmbentley', 'autoheader', 'hwloc-gather-cpuid', 'pamendian', 'imginfo', 'rawtopgm', 'h5clear', 'psicc', 'pcretest', 'recode-sr-latin', 'glib-gettextize', 'xzcmp', 'GraphicsMagick++-config', 'pamtofits', 'gm', 'gouldtoppm', 'lzcat', 'double', 'pnmtorle', 'pamoil', 'pbmtoibm23xx', 'jpgicc', 'pydoc3.8', 'pgmmedian', 'hwloc-diff', 'yuv-distortion', 'sndfile-info', 'pammixinterlace', 'pbmtopsg3', 'lstopo-no-graphics', 'fc-cache', 'ppmtopj', 'pampop9', 'tclselect', 'pnmremap', 'hwloc-ps', 'gdbus', 'pcxtoppm', 'fc-cat', 'fftw-wisdom-to-conf', 'callgrind_annotate', 'ppmtospu', 'ppmcolors', 'ppmtoleaf', 'lzdiff', 'h5redeploy', 'pgmtost4', 'pnmtopnm', 'pgmedge', 'valgrind-di-server', 'pamvalidate', 'gdbmtool', 'sbigtopgm', 'msgexec', 'rst2xml.py', 'pelican-themes', 'pamtotiff', 'glib-genmarshal', 'pcre-config', 'ngettext', 'git-clang-format', 'ppmhist', 'qhalf', 'rst2odt.py', 'winicontoppm', 'h5debug', 'pgmmorphconv', 'pamlookup', 'gcov-10', 'dwebp', 'xbmtopbm', 'pic2tpic', 'ppmtoyuv', 'ppmtomap', 'texdistmgr', 'pgmcrater', 'ifnames', 'pnmalias', 'pnmcolormap', 'pammixmulti', 'pgmtopbm', 'pbmto10x', 'x86_64-apple-darwin19-g++-10', 'ppmtopcx', 'lua5.3', 'gd2copypal', 'ppmrough', 'ppmmake', 'x265', 'lzmadec', 'fax2ps', 'pnmmercator', 'rgb3toppm', 'fc-match', 'pnmgamma', 'infotopam', 'idle3.8', 'h5repart', 'lzgrep', 'msgunfmt', 'pnmtoplainpnm', 'pamdeinterlace', 'pamgradient', 'h5import', 'pnmsplit', 'tiffcp', 'lzmore', 'xvminitoppm', 'hydra_persist', 'pamfile', 'h5fc', 'mpiexec', 'pnmnlfilt', 'pamtouil', 'pamtodjvurle', 'pelican', 'pgmtofs', 'pngtogd', 'pnmmargin', 'pamchannel', 'pnmquantall', 'pbmtomacp', 'f2py3', 'pbmtext', 'sndfile-metadata-get', 'pnmpad', 'ppmwheel', 'exrenvmap', 'ppmlabel', 'thinkjettopbm', 'pnmquant', 'pbmupc', 'msgfilter', 'winicontopam', 'wftopfa', 'pamtosrf', 'pamditherbw', 'pbmtoptx', 'pgmnoise', 'pbmtolj', 'lzfgrep', 'pamarith', 'exrheader', 'rst2pseudoxml.py', 'python3.8-config', 'fc-conflist', 'glib-mkenums', 'xzmore', 'hersheydemo', 'hb-view', 'pnmdepth', 'pammosaicknit', 'ppmquantall', 'cwebp', 'sndfile-interleave', 'sndfile-convert', 'tiffmedian', 'ppmshift', 'yuy2topam', 'mpic++', 'pamenlarge', 'xzgrep', 'mpifort', 'pamgauss', 'rst2s5.py', 'pydoc3', 'pamtotga', 'hb-shape', 'valgrind', 'pbmtoln03', 'pstopnm', 'ppmtompeg', 'svgtopam', 'rst2html.py', 'hydra_nameserver', 'lzma', 'rst2man.py', 'gdbm_load', 'pamcut', 'jasper', 'gemtopnm', 'pbmtoybm', 'spottopgm', 'pamfix', 'pic2plot', 'st4topgm', 'sndfile-play', 'srftopam', 'pnmmontage', 'x86_64-apple-darwin19-gfortran-10', '2to3-3.8', 'rdjpgcom', 'ppmbrighten', 'automake', 'tek2plot', 'icontopbm', 'lzegrep', 'cpack', 'rd-curves', 'raw2tiff', 'pamtris', 'transfig', 'msgfmt', 'ppmtoapplevol', 'pgmtoppm', 'ppm2tiff', 'rstpep2html.py', 'xzdiff', 'msgattrib', 'imgcmp', 'pcregrep', 'tiff2rgba', 'x86_64-apple-darwin19-gcc-10', 'pamtopam', 'pamrubber', 'pamtowinicon', 'ppmtoascii', 'xgettext', 'hb-subset', 'ppmtv', 'ppmtomitsu', 'imgtoppm', 'gio', 'hwloc-annotate', 'xmlif', 'pamtopng', 'ppmnorm', 'ppmcolormask', 'pamtable', 'pnmscale', 'h5dump', '.keepme', 'ms_print', 'fc-scan', 'gettextize', 'pelican-import', 'VBoxVRDP', 'msguniq', 'bmptoppm', 'pnmtojbig', 'qhull', 'octave-config-5.2.0'] Warning accessing gives errors: [Errno 2] No such file or directory: '' Path provided by --with-executables-search-path ['win32fe.exe', 'win32feutils.dll'] Checking for program /Developer/NVIDIA/CUDA-6.5/bin/nvcc...not found Checking for program /Users/markadams/Codes/petsc/lib/petsc/bin/win32fe/nvcc...not found Unable to find programs ['nvcc'] providing listing of each search directory to help debug Path provided in Python program Warning accessing /Developer/NVIDIA/CUDA-6.5/bin gives errors: [Errno 2] No such file or directory: '/Developer/NVIDIA/CUDA-6.5/bin' Path provided by --with-executables-search-path ['win32fe.exe', 'win32feutils.dll'] Checking for program /usr/local/cuda/bin/nvcc...not found Checking for program /Users/markadams/Codes/petsc/lib/petsc/bin/win32fe/nvcc...not found Unable to find programs ['nvcc'] providing listing of each search directory to help debug Path provided in Python program Warning accessing /usr/local/cuda/bin gives errors: [Errno 2] No such file or directory: '/usr/local/cuda/bin' Path provided by --with-executables-search-path ['win32fe.exe', 'win32feutils.dll'] ================================================================================ TEST checkCUDAPreprocessor from config.setCompilers(/Users/markadams/Codes/petsc/config/BuildSystem/config/setCompilers.py:750) TESTING: checkCUDAPreprocessor from config.setCompilers(config/BuildSystem/config/setCompilers.py:750) Locate a functional CUDA preprocessor ================================================================================ TEST checkCxxCompiler from config.setCompilers(/Users/markadams/Codes/petsc/config/BuildSystem/config/setCompilers.py:849) TESTING: checkCxxCompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:849) Locate a functional Cxx compiler Checking for program /usr/local/Cellar/mpich/3.3.2_1/bin/mpiicpc...not found Checking for program /Users/markadams/Codes/petsc/lib/petsc/bin/win32fe/mpiicpc...not found Unable to find programs ['mpiicpc'] providing listing of each search directory to help debug Path provided in Python program ['mpif90', 'hydra_pmi_proxy', 'mpirun', 'mpiexec.hydra', 'mpivars', 'mpif77', 'mpichversion', 'mpicc', 'parkill', 'mpicxx', 'hydra_persist', 'mpiexec', 'mpic++', 'mpifort', 'hydra_nameserver'] Path provided by --with-executables-search-path ['win32fe.exe', 'win32feutils.dll'] Checking for program /usr/local/Cellar/mpich/3.3.2_1/bin/mpiicpc...not found Checking for program /Users/markadams/Codes/petsc/lib/petsc/bin/win32fe/mpiicpc...not found Unable to find programs ['mpiicpc'] providing listing of each search directory to help debug Path provided in Python program ['mpif90', 'hydra_pmi_proxy', 'mpirun', 'mpiexec.hydra', 'mpivars', 'mpif77', 'mpichversion', 'mpicc', 'parkill', 'mpicxx', 'hydra_persist', 'mpiexec', 'mpic++', 'mpifort', 'hydra_nameserver'] Path provided by --with-executables-search-path ['win32fe.exe', 'win32feutils.dll'] Checking for program /usr/local/Cellar/mpich/3.3.2_1/bin/mpiicpc...not found Checking for program /Users/markadams/Codes/petsc/lib/petsc/bin/win32fe/mpiicpc...not found Unable to find programs ['mpiicpc'] providing listing of each search directory to help debug Path provided in Python program ['mpif90', 'hydra_pmi_proxy', 'mpirun', 'mpiexec.hydra', 'mpivars', 'mpif77', 'mpichversion', 'mpicc', 'parkill', 'mpicxx', 'hydra_persist', 'mpiexec', 'mpic++', 'mpifort', 'hydra_nameserver'] Path provided by --with-executables-search-path ['win32fe.exe', 'win32feutils.dll'] Checking for program /usr/local/Cellar/mpich/3.3.2_1/bin/mpicxx...found Defined make macro "CXX" to "/usr/local/Cellar/mpich/3.3.2_1/bin/mpicxx" Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicxx -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicxx -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicxx -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicxx -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicxx -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o -lpetsc-ufod4vtr9mqHvKIQiVAm Possible ERROR while running linker: exit code 1 stderr: ld: library not found for -lpetsc-ufod4vtr9mqHvKIQiVAm clang-10: error: linker command failed with exit code 1 (use -v to see invocation) Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicxx -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicxx -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o Testing executable /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest to see if it can be run Executing: /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest Running Executable with threads to time it out at 60 Executing: /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicxx --version stdout: clang version 10.0.0 Target: x86_64-apple-darwin19.5.0 Thread model: posix InstalledDir: /usr/local/opt/llvm/bin ================================================================================ TEST checkCxxPreprocessor from config.setCompilers(/Users/markadams/Codes/petsc/config/BuildSystem/config/setCompilers.py:890) TESTING: checkCxxPreprocessor from config.setCompilers(config/BuildSystem/config/setCompilers.py:890) Locate a functional Cxx preprocessor Checking for program /usr/local/Cellar/mpich/3.3.2_1/bin/mpicxx...found Defined make macro "CXXPP" to "/usr/local/Cellar/mpich/3.3.2_1/bin/mpicxx -E" Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicxx -E -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.cc Preprocess stderr before filtering: : Preprocess stderr after filtering: : ================================================================================ TEST checkFortranCompiler from config.setCompilers(/Users/markadams/Codes/petsc/config/BuildSystem/config/setCompilers.py:991) TESTING: checkFortranCompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:991) Locate a functional Fortran compiler ================================================================================ TEST checkLargeFileIO from config.setCompilers(/Users/markadams/Codes/petsc/config/BuildSystem/config/setCompilers.py:1181) TESTING: checkLargeFileIO from config.setCompilers(config/BuildSystem/config/setCompilers.py:1181) ================================================================================ TEST checkArchiver from config.setCompilers(/Users/markadams/Codes/petsc/config/BuildSystem/config/setCompilers.py:1280) TESTING: checkArchiver from config.setCompilers(config/BuildSystem/config/setCompilers.py:1280) Check that the archiver exists and can make a library usable by the compiler Running Executable WITHOUT threads to time it out Executing: ar -V Running Executable WITHOUT threads to time it out Executing: ar -V Defined make macro "FAST_AR_FLAGS" to "Scq" Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int foo(int a) { return a+1; } Checking for program /usr/local/opt/llvm/bin/ar...not found Checking for program /opt/anaconda2/bin/ar...not found Checking for program /opt/anaconda2/bin/ar...not found Checking for program /Users/markadams/opt/miniconda2/bin/ar...not found Checking for program /opt/miniconda2/bin/ar...not found Checking for program /Users/markadams/opt/miniconda3/bin/ar...not found Checking for program /usr/local/opt/texinfo/bin/ar...not found Checking for program /Users/markadams/homebrew/sbin/ar...not found Checking for program /Users/markadams/homebrew/bin/ar...not found Checking for program /Users/markadams/homebrew/bin/ar...not found Checking for program /usr/local/bin/ar...not found Checking for program /usr/local/bin/ar...not found Checking for program /usr/bin/ar...found Defined make macro "AR" to "/usr/bin/ar" Checking for program /usr/local/opt/llvm/bin/ranlib...not found Checking for program /opt/anaconda2/bin/ranlib...not found Checking for program /opt/anaconda2/bin/ranlib...not found Checking for program /Users/markadams/opt/miniconda2/bin/ranlib...not found Checking for program /opt/miniconda2/bin/ranlib...not found Checking for program /Users/markadams/opt/miniconda3/bin/ranlib...not found Checking for program /usr/local/opt/texinfo/bin/ranlib...not found Checking for program /Users/markadams/homebrew/sbin/ranlib...not found Checking for program /Users/markadams/homebrew/bin/ranlib...not found Checking for program /Users/markadams/homebrew/bin/ranlib...not found Checking for program /usr/local/bin/ranlib...not found Checking for program /usr/local/bin/ranlib...not found Checking for program /usr/bin/ranlib...found Defined make macro "RANLIB" to "/usr/bin/ranlib -c" Running Executable WITHOUT threads to time it out Executing: /usr/bin/ar cr /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/libconf1.a /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conf1.o Running Executable WITHOUT threads to time it out Executing: /usr/bin/ranlib -c /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/libconf1.a Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.c Possible ERROR while running compiler: stderr: /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.c:6:26: warning: if statement has empty body [-Wempty-body] int b = foo(1); if (b); ^ /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.c:6:26: note: put the semicolon on a separate line to silence this warning 1 warning generated. Source: #include "confdefs.h" #include "conffix.h" extern int foo(int); int main() { int b = foo(1); if (b); ; return 0; } Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o -L/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers -lconf1 Defined make macro "AR_FLAGS" to "cr" Defined make macro "AR_LIB_SUFFIX" to "a" ================================================================================ TEST checkSharedLinker from config.setCompilers(/Users/markadams/Codes/petsc/config/BuildSystem/config/setCompilers.py:1394) TESTING: checkSharedLinker from config.setCompilers(config/BuildSystem/config/setCompilers.py:1394) Check that the linker can produce shared libraries Running Executable WITHOUT threads to time it out Executing: uname -s stdout: Darwin Checking shared linker /usr/local/Cellar/mpich/3.3.2_1/bin/mpicxx using flags ['-dynamiclib -single_module', '-undefined dynamic_lookup', '-multiply_defined suppress', '-no_compact_unwind'] Checking for program /usr/local/Cellar/mpich/3.3.2_1/bin/mpicxx...found Defined make macro "LD_SHARED" to "/usr/local/Cellar/mpich/3.3.2_1/bin/mpicxx" Trying C compiler flag Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest -dynamiclib -single_module /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o Valid C linker flag -dynamiclib -single_module Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest -undefined dynamic_lookup /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o Valid C linker flag -undefined dynamic_lookup Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest -multiply_defined suppress /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o Valid C linker flag -multiply_defined suppress Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest -no_compact_unwind /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o Possible ERROR while running linker: exit code 1 stderr: clang-10: error: unknown argument: '-no_compact_unwind' Rejecting linker flag -no_compact_unwind due to nonzero status from link Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int (*fprintf_ptr)(FILE*,const char*,...) = fprintf; void foo(void){ fprintf_ptr(stdout,"hello"); return; } void bar(void){foo();} Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicxx -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/libconftest.dylib -dynamiclib -single_module -undefined dynamic_lookup -multiply_defined suppress /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int foo(void); int main() { int ret = foo(); if (ret) {} ; return 0; } Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o -L/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers -lconftest Using shared linker /usr/local/Cellar/mpich/3.3.2_1/bin/mpicxx with flags ['-dynamiclib -single_module', '-undefined dynamic_lookup', '-multiply_defined suppress'] and library extension dylib Running Executable WITHOUT threads to time it out Executing: uname -s stdout: Darwin ================================================================================ TEST checkLinkerMac from config.setCompilers(/Users/markadams/Codes/petsc/config/BuildSystem/config/setCompilers.py:1468) TESTING: checkLinkerMac from config.setCompilers(config/BuildSystem/config/setCompilers.py:1468) Tests some Apple Mac specific linker flags Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest -Wl,-multiply_defined,suppress /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o Valid C linker flag -Wl,-multiply_defined,suppress Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest -Wl,-multiply_defined -Wl,suppress -Wl,-multiply_defined,suppress /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o Valid C linker flag -Wl,-multiply_defined -Wl,suppress Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest -Wl,-commons,use_dylibs -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o Valid C linker flag -Wl,-commons,use_dylibs Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest -Wl,-search_paths_first -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o Valid C linker flag -Wl,-search_paths_first Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest -Wl,-no_compact_unwind -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o Valid C linker flag -Wl,-no_compact_unwind Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicxx -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicxx -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest -Wl,-multiply_defined,suppress /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o Valid Cxx linker flag -Wl,-multiply_defined,suppress Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicxx -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicxx -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest -Wl,-multiply_defined -Wl,suppress -Wl,-multiply_defined,suppress /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o Valid Cxx linker flag -Wl,-multiply_defined -Wl,suppress Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicxx -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicxx -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest -Wl,-commons,use_dylibs -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o Valid Cxx linker flag -Wl,-commons,use_dylibs Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicxx -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicxx -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest -Wl,-search_paths_first -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o Valid Cxx linker flag -Wl,-search_paths_first Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicxx -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicxx -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest -Wl,-no_compact_unwind -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o Valid Cxx linker flag -Wl,-no_compact_unwind Running Executable WITHOUT threads to time it out Executing: uname -s stdout: Darwin ================================================================================ TEST checkPIC from config.setCompilers(/Users/markadams/Codes/petsc/config/BuildSystem/config/setCompilers.py:1128) TESTING: checkPIC from config.setCompilers(config/BuildSystem/config/setCompilers.py:1128) Determine the PIC option for each compiler Trying C for PIC code without any compiler flag Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int (*fprintf_ptr)(FILE*,const char*,...) = fprintf; void foo(void){ fprintf_ptr(stdout,"hello"); return; } void bar(void){foo();} Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicxx -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/libconftest.dylib -dynamiclib -single_module -undefined dynamic_lookup -multiply_defined suppress /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o Accepted C PIC code without compiler flag Trying Cxx for PIC code without any compiler flag Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicxx -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicxx -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int (*fprintf_ptr)(FILE*,const char*,...) = fprintf; void foo(void){ fprintf_ptr(stdout,"hello"); return; } void bar(void){foo();} Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicxx -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/libconftest.dylib -dynamiclib -single_module -undefined dynamic_lookup -multiply_defined suppress /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o Accepted Cxx PIC code without compiler flag ================================================================================ TEST checkSharedLinkerPaths from config.setCompilers(/Users/markadams/Codes/petsc/config/BuildSystem/config/setCompilers.py:1506) TESTING: checkSharedLinkerPaths from config.setCompilers(config/BuildSystem/config/setCompilers.py:1506) Determine the shared linker path options - IRIX: -rpath - Linux, OSF: -Wl,-rpath, - Solaris: -R - FreeBSD: -Wl,-R, Running Executable WITHOUT threads to time it out Executing: uname -s stdout: Darwin Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -V Trying C linker flag -Wl,-rpath, Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest -Wl,-rpath,/Users/markadams/Codes/petsc -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o Valid C linker flag -Wl,-rpath,/Users/markadams/Codes/petsc Running Executable WITHOUT threads to time it out Executing: uname -s stdout: Darwin Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -V Trying Cxx linker flag -Wl,-rpath, Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicxx -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicxx -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest -Wl,-rpath,/Users/markadams/Codes/petsc -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o Valid Cxx linker flag -Wl,-rpath,/Users/markadams/Codes/petsc ================================================================================ TEST checkLibC from config.setCompilers(/Users/markadams/Codes/petsc/config/BuildSystem/config/setCompilers.py:1541) TESTING: checkLibC from config.setCompilers(config/BuildSystem/config/setCompilers.py:1541) Test whether we need to explicitly include libc in shared linking - Mac OSX requires an explicit reference to libc for shared linking Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int foo(void) {void *chunk = malloc(31); free(chunk); return 0;} Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicxx -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/libconftest.dylib -dynamiclib -single_module -undefined dynamic_lookup -multiply_defined suppress /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o Shared linking does not require an explicit libc reference ================================================================================ TEST checkDynamicLinker from config.setCompilers(/Users/markadams/Codes/petsc/config/BuildSystem/config/setCompilers.py:1587) TESTING: checkDynamicLinker from config.setCompilers(config/BuildSystem/config/setCompilers.py:1587) Check that the linker can dynamicaly load shared libraries Checking for header: dlfcn.h All intermediate test results are stored in /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.headers Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -E -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.headers /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.headers/conftest.c Preprocess stderr before filtering: : Preprocess stderr after filtering: : Defined "HAVE_DLFCN_H" to "1" Checking for functions [dlopen dlsym dlclose] in library ['dl'] [] All intermediate test results are stored in /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.libraries Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.libraries/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.libraries /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dlopen(); static void _check_dlopen() { dlopen(); } char dlsym(); static void _check_dlsym() { dlsym(); } char dlclose(); static void _check_dlclose() { dlclose(); } int main() { _check_dlopen(); _check_dlsym(); _check_dlclose();; return 0; } Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.libraries/conftest -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.libraries/conftest.o -ldl Defined "HAVE_LIBDL" to "1" Adding ['dl'] to LIBS Running Executable WITHOUT threads to time it out Executing: uname -s stdout: Darwin Checking dynamic linker /usr/local/Cellar/mpich/3.3.2_1/bin/mpicxx using flags ['-dynamiclib -single_module -undefined dynamic_lookup -multiply_defined suppress'] Checking for program /usr/local/Cellar/mpich/3.3.2_1/bin/mpicxx...found Defined make macro "DYNAMICLINKER" to "/usr/local/Cellar/mpich/3.3.2_1/bin/mpicxx" Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.libraries -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest -dynamiclib -single_module -undefined dynamic_lookup -multiply_defined suppress -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o -ldl Valid C linker flag -dynamiclib -single_module -undefined dynamic_lookup -multiply_defined suppress Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.libraries -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int foo(void) {printf("test");return 0;} Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicxx -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/libconftest.dylib -dynamiclib -single_module -undefined dynamic_lookup -multiply_defined suppress /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o -ldl Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.libraries -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include int main() { void *handle = dlopen("/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/libconftest.dylib", 0); int (*foo)(void) = (int (*)(void)) dlsym(handle, "foo"); if (!foo) { printf("Could not load symbol\n"); return -1; } if ((*foo)()) { printf("Invalid return from foo()\n"); return -1; } if (dlclose(handle)) { printf("Could not close library\n"); return -1; } ; return 0; } Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o -ldl Using dynamic linker /usr/local/Cellar/mpich/3.3.2_1/bin/mpicxx with flags ['-dynamiclib -single_module -undefined dynamic_lookup -multiply_defined suppress'] and library extension dylib ================================================================================ TEST output from config.setCompilers(/Users/markadams/Codes/petsc/config/BuildSystem/config/setCompilers.py:1636) TESTING: output from config.setCompilers(config/BuildSystem/config/setCompilers.py:1636) Output module data as defines and substitutions Substituting "CC" with "/usr/local/Cellar/mpich/3.3.2_1/bin/mpicc" Substituting "CFLAGS" with "" Defined make macro "CC_LINKER_SLFLAG" to "-Wl,-rpath," Substituting "CPP" with "/usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -E" Substituting "CPPFLAGS" with "" Substituting "CXX" with "/usr/local/Cellar/mpich/3.3.2_1/bin/mpicxx" Substituting "CXX_CXXFLAGS" with "" Substituting "CXXFLAGS" with "" Substituting "CXX_LINKER_SLFLAG" with "-Wl,-rpath," Substituting "CXXPP" with "/usr/local/Cellar/mpich/3.3.2_1/bin/mpicxx -E" Substituting "CXXPPFLAGS" with "" Substituting "FC" with "" Substituting "LDFLAGS" with "" Substituting "LIBS" with "-ldl " Substituting "SHARED_LIBRARY_FLAG" with "-dynamiclib -single_module -undefined dynamic_lookup -multiply_defined suppress" child config.setCompilers 6.867071 ================================================================================ TEST checkSharedDynamicPicOptions from PETSc.options.sharedLibraries(/Users/markadams/Codes/petsc/config/PETSc/options/sharedLibraries.py:36) TESTING: checkSharedDynamicPicOptions from PETSc.options.sharedLibraries(config/PETSc/options/sharedLibraries.py:36) ================================================================================ TEST configureSharedLibraries from PETSc.options.sharedLibraries(/Users/markadams/Codes/petsc/config/PETSc/options/sharedLibraries.py:52) TESTING: configureSharedLibraries from PETSc.options.sharedLibraries(config/PETSc/options/sharedLibraries.py:52) Checks whether shared libraries should be used, for which you must - Specify --with-shared-libraries - Have found a working shared linker Defines PETSC_USE_SHARED_LIBRARIES if they are used Running Executable WITHOUT threads to time it out Executing: uname -s stdout: Darwin Defined make rule "shared_arch" with dependencies "shared_darwin" and code [] Defined make macro "SONAME_FUNCTION" to "$(1).$(2).dylib" Defined make macro "SL_LINKER_FUNCTION" to "-dynamiclib -install_name $(call SONAME_FUNCTION,$(1),$(2)) -compatibility_version $(2) -current_version $(3) -single_module -multiply_defined suppress -undefined dynamic_lookup" Defined make macro "BUILDSHAREDLIB" to "yes" Defined "USE_SHARED_LIBRARIES" to "1" ================================================================================ TEST configureDynamicLibraries from PETSc.options.sharedLibraries(/Users/markadams/Codes/petsc/config/PETSc/options/sharedLibraries.py:97) TESTING: configureDynamicLibraries from PETSc.options.sharedLibraries(config/PETSc/options/sharedLibraries.py:97) Checks whether dynamic loading is available (with dlfcn.h and libdl) Defined "HAVE_DYNAMIC_LIBRARIES" to "1" ================================================================================ TEST configureSerializedFunctions from PETSc.options.sharedLibraries(/Users/markadams/Codes/petsc/config/PETSc/options/sharedLibraries.py:103) TESTING: configureSerializedFunctions from PETSc.options.sharedLibraries(config/PETSc/options/sharedLibraries.py:103) Defines PETSC_SERIALIZE_FUNCTIONS if they are used Requires shared libraries child PETSc.options.sharedLibraries 0.009433 ================================================================================ TEST configureIndexSize from PETSc.options.indexTypes(/Users/markadams/Codes/petsc/config/PETSc/options/indexTypes.py:39) TESTING: configureIndexSize from PETSc.options.indexTypes(config/PETSc/options/indexTypes.py:39) Defined make macro "PETSC_INDEX_SIZE" to "32" child PETSc.options.indexTypes 0.001558 ================================================================================ TEST configureCompilerFlags from config.compilerFlags(/Users/markadams/Codes/petsc/config/BuildSystem/config/compilerFlags.py:72) TESTING: configureCompilerFlags from config.compilerFlags(config/BuildSystem/config/compilerFlags.py:72) Get the default compiler flags Defined make macro "C_VERSION" to "clang version 10.0.0 " Defined make macro "MPICC_SHOW" to "clang -Wl,-flat_namespace -Wl,-commons,use_dylibs -I/usr/local/Cellar/mpich/3.3.2_1/include -L/usr/local/Cellar/mpich/3.3.2_1/lib -lmpi -lpmpi" Trying C compiler flag -Wall Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.libraries -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers -Wall /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Added C compiler flag -Wall Trying C compiler flag -Wwrite-strings Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.libraries -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers -Wall -Wwrite-strings /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Added C compiler flag -Wwrite-strings Trying C compiler flag -Wno-strict-aliasing Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.libraries -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers -Wall -Wwrite-strings -Wno-strict-aliasing /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Added C compiler flag -Wno-strict-aliasing Trying C compiler flag -Wno-unknown-pragmas Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.libraries -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Added C compiler flag -Wno-unknown-pragmas Trying C compiler flag -fstack-protector Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.libraries -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -fstack-protector /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Added C compiler flag -fstack-protector Trying C compiler flag -fno-stack-check Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.libraries -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -fstack-protector -fno-stack-check /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Added C compiler flag -fno-stack-check Trying C compiler flag -mfp16-format=ieee Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.libraries -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -fstack-protector -fno-stack-check -mfp16-format=ieee /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.c Possible ERROR while running compiler: exit code 1 stderr: clang-10: error: unknown argument: '-mfp16-format=ieee' Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejecting compiler flag -mfp16-format=ieee due to nonzero status from link Rejecting compiler flag -mfp16-format=ieee due to clang-10: error: unknown argument: '-mfp16-format=ieee' PETSc Error: No output file produced Rejected C compiler flag -mfp16-format=ieee Trying C compiler flag -Qunused-arguments Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.libraries -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Added C compiler flag -Qunused-arguments Trying C compiler flag -fvisibility=hidden Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.libraries -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Added C compiler flag -fvisibility=hidden Trying C compiler flag -g -O0 -fopenmp Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.libraries -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g -O0 -fopenmp /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Added C compiler flag -g -O0 -fopenmp Defined make macro "Cxx_VERSION" to "clang version 10.0.0 " Defined make macro "MPICXX_SHOW" to "clang++ -Wl,-flat_namespace -Wl,-commons,use_dylibs -I/usr/local/Cellar/mpich/3.3.2_1/include -L/usr/local/Cellar/mpich/3.3.2_1/lib -lmpicxx -lmpi -lpmpi" Trying Cxx compiler flag -Wall Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicxx -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers -Wall /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Added Cxx compiler flag -Wall Trying Cxx compiler flag -Wwrite-strings Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicxx -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers -Wall -Wwrite-strings /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Added Cxx compiler flag -Wwrite-strings Trying Cxx compiler flag -Wno-strict-aliasing Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicxx -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers -Wall -Wwrite-strings -Wno-strict-aliasing /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Added Cxx compiler flag -Wno-strict-aliasing Trying Cxx compiler flag -Wno-unknown-pragmas Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicxx -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Added Cxx compiler flag -Wno-unknown-pragmas Trying Cxx compiler flag -fstack-protector Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicxx -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -fstack-protector /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Added Cxx compiler flag -fstack-protector Trying Cxx compiler flag -fno-stack-check Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicxx -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -fstack-protector -fno-stack-check /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Added Cxx compiler flag -fno-stack-check Trying Cxx compiler flag -fvisibility=hidden Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicxx -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -fstack-protector -fno-stack-check -fvisibility=hidden /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Added Cxx compiler flag -fvisibility=hidden Defined make macro "MPICXX_SHOW" to "clang++ -Wl,-flat_namespace -Wl,-commons,use_dylibs -I/usr/local/Cellar/mpich/3.3.2_1/include -L/usr/local/Cellar/mpich/3.3.2_1/lib -lmpicxx -lmpi -lpmpi" Trying Cxx compiler flag -g Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicxx -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -fstack-protector -fno-stack-check -fvisibility=hidden -g /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Added Cxx compiler flag -g child config.compilerFlags 1.690816 Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc --help | head -n 20 stdout: OVERVIEW: clang LLVM compiler USAGE: clang-10 [options] file... OPTIONS: -### Print (but do not run) the commands to run for this compilation --analyzer-output Static analyzer report output format (html|plist|plist-multi-file|plist-html|sarif|text). --analyze Run the static analyzer -arcmt-migrate-emit-errors Emit ARC errors even if the migrator can fix them -arcmt-migrate-report-output Output path for the plist report -B Add to search path for binaries and object files used implicitly -CC Include comments from within macros in preprocessed output -cl-denorms-are-zero OpenCL only. Allow denormals to be flushed to zero. -cl-fast-relaxed-math OpenCL only. Sets -cl-finite-math-only and -cl-unsafe-math-optimizations, and defines __FAST_RELAXED_MATH__. -cl-finite-math-only OpenCL only. Allow floating-point optimizations that assume arguments and results are not NaNs or +-Inf. -cl-fp32-correctly-rounded-divide-sqrt OpenCL only. Specify that single precision floating-point divide and sqrt used in the program source are correctly rounded. ================================================================================ TEST checkC99Flag from config.compilers(/Users/markadams/Codes/petsc/config/BuildSystem/config/compilers.py:1408) TESTING: checkC99Flag from config.compilers(config/BuildSystem/config/compilers.py:1408) Check for -std=c99 or equivalent flag Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.libraries -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g -O0 -fopenmp /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { float x[2],y; y = FLT_ROUNDS; // c++ comment int j = 2; for (int i=0; i<2; i++){ x[i] = i*j*y; } ; return 0; } Accepted C99 compile flag: ================================================================================ TEST checkRestrict from config.compilers(/Users/markadams/Codes/petsc/config/BuildSystem/config/compilers.py:150) TESTING: checkRestrict from config.compilers(config/BuildSystem/config/compilers.py:150) Check for the C/CXX restrict keyword Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -V All intermediate test results are stored in /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.libraries -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g -O0 -fopenmp /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers/conftest.c Possible ERROR while running compiler: stderr: /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers/conftest.c:5:20: warning: unused variable 'x' [-Wunused-variable] float * __restrict x;; ^ 1 warning generated. Source: #include "confdefs.h" #include "conffix.h" int main() { float * __restrict x;; return 0; } compilers: Set C restrict keyword to __restrict Defined "C_RESTRICT" to "__restrict" ================================================================================ TEST checkCFormatting from config.compilers(/Users/markadams/Codes/petsc/config/BuildSystem/config/compilers.py:405) TESTING: checkCFormatting from config.compilers(config/BuildSystem/config/compilers.py:405) Activate format string checking if using the GNU compilers ================================================================================ TEST checkCInline from config.compilers(/Users/markadams/Codes/petsc/config/BuildSystem/config/compilers.py:120) TESTING: checkCInline from config.compilers(config/BuildSystem/config/compilers.py:120) Check for C inline keyword Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.libraries -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g -O0 -fopenmp /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" static inline int foo(int a) {return a;} int main() { foo(1);; return 0; } compilers: Set C Inline keyword to inline Defined "C_INLINE" to "inline" ================================================================================ TEST checkDynamicLoadFlag from config.compilers(/Users/markadams/Codes/petsc/config/BuildSystem/config/compilers.py:416) TESTING: checkDynamicLoadFlag from config.compilers(config/BuildSystem/config/compilers.py:416) Checks that dlopen() takes RTLD_XXX, and defines PETSC_HAVE_RTLD_XXX if it does Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.libraries -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g -O0 -fopenmp /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include char *libname; int main() { dlopen(libname, RTLD_LAZY);dlopen(libname, RTLD_NOW);dlopen(libname, RTLD_LOCAL);dlopen(libname, RTLD_GLOBAL); ; return 0; } Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers/conftest -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g -O0 -fopenmp /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers/conftest.o -ldl Possible ERROR while running linker: exit code 1 stderr: ld: library not found for -lomp clang-10: error: linker command failed with exit code 1 (use -v to see invocation) Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.libraries -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g -O0 -fopenmp /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include char *libname; int main() { dlopen(libname, RTLD_LAZY); ; return 0; } Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers/conftest -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g -O0 -fopenmp /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers/conftest.o -ldl Possible ERROR while running linker: exit code 1 stderr: ld: library not found for -lomp clang-10: error: linker command failed with exit code 1 (use -v to see invocation) Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.libraries -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g -O0 -fopenmp /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include char *libname; int main() { dlopen(libname, RTLD_NOW); ; return 0; } Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers/conftest -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g -O0 -fopenmp /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers/conftest.o -ldl Possible ERROR while running linker: exit code 1 stderr: ld: library not found for -lomp clang-10: error: linker command failed with exit code 1 (use -v to see invocation) Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.libraries -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g -O0 -fopenmp /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include char *libname; int main() { dlopen(libname, RTLD_LOCAL); ; return 0; } Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers/conftest -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g -O0 -fopenmp /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers/conftest.o -ldl Possible ERROR while running linker: exit code 1 stderr: ld: library not found for -lomp clang-10: error: linker command failed with exit code 1 (use -v to see invocation) Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.libraries -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g -O0 -fopenmp /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include char *libname; int main() { dlopen(libname, RTLD_GLOBAL); ; return 0; } Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers/conftest -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g -O0 -fopenmp /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers/conftest.o -ldl Possible ERROR while running linker: exit code 1 stderr: ld: library not found for -lomp clang-10: error: linker command failed with exit code 1 (use -v to see invocation) ================================================================================ TEST checkCLibraries from config.compilers(/Users/markadams/Codes/petsc/config/BuildSystem/config/compilers.py:214) TESTING: checkCLibraries from config.compilers(config/BuildSystem/config/compilers.py:214) Determines the libraries needed to link with C compiled code Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.libraries -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g -O0 -fopenmp /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include void asub(void) {char s[16];printf("testing %s",s);} Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicxx -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -fstack-protector -fno-stack-check -fvisibility=hidden -g /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main(int argc,char **args) {return 0;} Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicxx -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers/conftest -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -fstack-protector -fno-stack-check -fvisibility=hidden -g /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers/conftest.o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers/confc.o -ldl C libraries are not needed when using C++ linker ================================================================================ TEST checkDependencyGenerationFlag from config.compilers(/Users/markadams/Codes/petsc/config/BuildSystem/config/compilers.py:1363) TESTING: checkDependencyGenerationFlag from config.compilers(config/BuildSystem/config/compilers.py:1363) Check if -MMD works for dependency generation, and add it if it does Trying C compiler flag -MMD -MP Defined make macro "C_DEPFLAGS" to "-MMD -MP" Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.libraries -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g -O0 -fopenmp -MMD -MP /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Trying Cxx compiler flag -MMD -MP Defined make macro "CXX_DEPFLAGS" to "-MMD -MP" Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicxx -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -fstack-protector -fno-stack-check -fvisibility=hidden -g -MMD -MP /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicxx --help | head -n 20 stdout: OVERVIEW: clang LLVM compiler USAGE: clang-10 [options] file... OPTIONS: -### Print (but do not run) the commands to run for this compilation --analyzer-output Static analyzer report output format (html|plist|plist-multi-file|plist-html|sarif|text). --analyze Run the static analyzer -arcmt-migrate-emit-errors Emit ARC errors even if the migrator can fix them -arcmt-migrate-report-output Output path for the plist report -B Add to search path for binaries and object files used implicitly -CC Include comments from within macros in preprocessed output -cl-denorms-are-zero OpenCL only. Allow denormals to be flushed to zero. -cl-fast-relaxed-math OpenCL only. Sets -cl-finite-math-only and -cl-unsafe-math-optimizations, and defines __FAST_RELAXED_MATH__. -cl-finite-math-only OpenCL only. Allow floating-point optimizations that assume arguments and results are not NaNs or +-Inf. -cl-fp32-correctly-rounded-divide-sqrt OpenCL only. Specify that single precision floating-point divide and sqrt used in the program source are correctly rounded. ================================================================================ TEST checkRestrict from config.compilers(/Users/markadams/Codes/petsc/config/BuildSystem/config/compilers.py:150) TESTING: checkRestrict from config.compilers(config/BuildSystem/config/compilers.py:150) Check for the C/CXX restrict keyword Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -V Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicxx -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -fstack-protector -fno-stack-check -fvisibility=hidden -g /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers/conftest.cc Possible ERROR while running compiler: stderr: /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers/conftest.cc:5:20: warning: unused variable 'x' [-Wunused-variable] float * __restrict x;; ^ 1 warning generated. Source: #include "confdefs.h" #include "conffix.h" int main() { float * __restrict x;; return 0; } compilers: Set Cxx restrict keyword to __restrict Defined "CXX_RESTRICT" to "__restrict" ================================================================================ TEST checkCxxDialect from config.compilers(/Users/markadams/Codes/petsc/config/BuildSystem/config/compilers.py:463) TESTING: checkCxxDialect from config.compilers(config/BuildSystem/config/compilers.py:463) Determine the Cxx dialect supported by the compiler [and correspoding compiler option - if any]. -with-cxx-dialect can take options: auto: use highest dialect configure can determine cxx17: [future?] cxx14: gnu++14 or c++14 cxx11: gnu++11 or c++11 0: disable CxxDialect check and use compiler default checkCxxDialect: checking CXX11 with flag: Defined "HAVE_CXX_DIALECT_CXX11" to "1" Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicxx -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -fstack-protector -fno-stack-check -fvisibility=hidden -g /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #include template constexpr T Cubed( T x ) { return x*x*x; } int main() { std::random_device rd; std::mt19937 mt(rd()); std::normal_distribution dist(0,1); const double x = dist(mt); std::cout << x; ; return 0; } ================================================================================ TEST checkCxxOptionalExtensions from config.compilers(/Users/markadams/Codes/petsc/config/BuildSystem/config/compilers.py:435) TESTING: checkCxxOptionalExtensions from config.compilers(config/BuildSystem/config/compilers.py:435) Check whether the C++ compiler (IBM xlC, OSF5) need special flag for .c files which contain C++ Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicxx -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -fstack-protector -fno-stack-check -fvisibility=hidden -g /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.c Possible ERROR while running compiler: stderr: clang-10: warning: treating 'c' input as 'c++' when in C++ mode, this behavior is deprecated [-Wdeprecated] /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.c:5:22: warning: private field 'i' is not used [-Wunused-private-field] class somename { int i; };; ^ 1 warning generated. Source: #include "confdefs.h" #include "conffix.h" int main() { class somename { int i; };; return 0; } ================================================================================ TEST checkCxxInline from config.compilers(/Users/markadams/Codes/petsc/config/BuildSystem/config/compilers.py:135) TESTING: checkCxxInline from config.compilers(config/BuildSystem/config/compilers.py:135) Check for C++ inline keyword Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicxx -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -fstack-protector -fno-stack-check -fvisibility=hidden -g /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" static inline int foo(int a) {return a;} int main() { foo(1);; return 0; } compilers: Set Cxx Inline keyword to inline Defined "CXX_INLINE" to "inline" ================================================================================ TEST checkCxxLibraries from config.compilers(/Users/markadams/Codes/petsc/config/BuildSystem/config/compilers.py:547) TESTING: checkCxxLibraries from config.compilers(config/BuildSystem/config/compilers.py:547) Determines the libraries needed to link with C++ from C and Fortran Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicxx -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -fstack-protector -fno-stack-check -fvisibility=hidden -g /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include void asub(void) {std::vector v; try { throw 20; } catch (int e) { std::cout << "An exception occurred"; }} Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.libraries -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g -O0 -fopenmp /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main(int argc,char **args) {return 0;} Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers/conftest -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g -O0 -fopenmp /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers/conftest.o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers/confc.o -ldl Possible ERROR while running linker: exit code 1 stderr: ld: library not found for -lomp clang-10: error: linker command failed with exit code 1 (use -v to see invocation) Running Executable WITHOUT threads to time it out Executing: uname -s stdout: Darwin Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc --help | head -n 500 Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicxx -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -fstack-protector -fno-stack-check -fvisibility=hidden -g /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include void asub(void) {std::vector v; try { throw 20; } catch (int e) { std::cout << "An exception occurred"; }} Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.libraries -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g -O0 -fopenmp /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main(int argc,char **args) {return 0;} Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers/conftest -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g -O0 -fopenmp /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers/conftest.o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers/confc.o -lc++ -ldl Possible ERROR while running linker: exit code 1 stderr: ld: library not found for -lomp clang-10: error: linker command failed with exit code 1 (use -v to see invocation) C++ code cannot directly be linked with C linker using -lc++, therefore will determine needed C++ libraries Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicxx -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -fstack-protector -fno-stack-check -fvisibility=hidden -g /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include void asub(void) {std::vector v; try { throw 20; } catch (int e) { std::cout << "An exception occurred"; }} Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.libraries -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g -O0 -fopenmp /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main(int argc,char **args) {return 0;} Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers/conftest -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g -O0 -fopenmp /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers/conftest.o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers/confc.o -lstdc++ -ldl Possible ERROR while running linker: exit code 1 stderr: ld: library not found for -lomp clang-10: error: linker command failed with exit code 1 (use -v to see invocation) C++ code cannot directly be linked with C linker using -lstdc++, therefore will determine needed C++ libraries Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicxx -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -fstack-protector -fno-stack-check -fvisibility=hidden -g /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicxx -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers/conftest -v -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -fstack-protector -fno-stack-check -fvisibility=hidden -g /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers/conftest.o -ldl stdout: mpicxx for MPICH version 3.3.2 Possible ERROR while running linker: stdout: mpicxx for MPICH version 3.3.2stderr: clang version 10.0.0 Target: x86_64-apple-darwin19.5.0 Thread model: posix InstalledDir: /usr/local/opt/llvm/bin "/usr/bin/ld" -demangle -lto_library /usr/local/Cellar/llvm/10.0.0_3/lib/libLTO.dylib -dynamic -arch x86_64 -platform_version macos 10.15.0 0.0.0 -syslibroot /Library/Developer/CommandLineTools/SDKs/MacOSX10.15.sdk -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers/conftest -L/usr/local/Cellar/mpich/3.3.2_1/lib -flat_namespace -commons use_dylibs -multiply_defined suppress -multiply_defined suppress -commons use_dylibs -search_paths_first -no_compact_unwind /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers/conftest.o -ldl -lmpicxx -lmpi -lpmpi -lc++ -lSystem /usr/local/Cellar/llvm/10.0.0_3/lib/clang/10.0.0/lib/darwin/libclang_rt.osx.a compilers: Checking arg mpicxx compilers: Unknown arg mpicxx compilers: Checking arg for compilers: Unknown arg for compilers: Checking arg MPICH compilers: Unknown arg MPICH compilers: Checking arg version compilers: Unknown arg version compilers: Checking arg 3.3.2 compilers: Unknown arg 3.3.2 compilers: Checking arg clang compilers: Unknown arg clang compilers: Checking arg version compilers: Unknown arg version compilers: Checking arg 10.0.0 compilers: Unknown arg 10.0.0 compilers: Checking arg Target: compilers: Unknown arg Target: compilers: Checking arg x86_64-apple-darwin19.5.0 compilers: Unknown arg x86_64-apple-darwin19.5.0 compilers: Checking arg Thread compilers: Unknown arg Thread compilers: Checking arg model: compilers: Unknown arg model: compilers: Checking arg posix compilers: Unknown arg posix compilers: Checking arg InstalledDir: compilers: Unknown arg InstalledDir: compilers: Checking arg /usr/local/opt/llvm/bin compilers: Unknown arg /usr/local/opt/llvm/bin compilers: Checking arg "/usr/bin/ld" compilers: Unknown arg /usr/bin/ld compilers: Checking arg -demangle compilers: Unknown arg -demangle compilers: Checking arg -lto_library Skipping Apple LLVM linker option -lto_library /usr/local/Cellar/llvm/10.0.0_3/lib/libLTO.dylib compilers: Checking arg -dynamic compilers: Unknown arg -dynamic compilers: Checking arg -arch compilers: Unknown arg -arch compilers: Checking arg x86_64 compilers: Unknown arg x86_64 compilers: Checking arg -platform_version compilers: Unknown arg -platform_version compilers: Checking arg macos compilers: Unknown arg macos compilers: Checking arg 10.15.0 compilers: Unknown arg 10.15.0 compilers: Checking arg 0.0.0 compilers: Unknown arg 0.0.0 compilers: Checking arg -syslibroot compilers: Unknown arg -syslibroot compilers: Checking arg /Library/Developer/CommandLineTools/SDKs/MacOSX10.15.sdk compilers: Unknown arg /Library/Developer/CommandLineTools/SDKs/MacOSX10.15.sdk compilers: Checking arg -o compilers: Unknown arg -o compilers: Checking arg /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers/conftest compilers: Unknown arg /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers/conftest compilers: Checking arg -L/usr/local/Cellar/mpich/3.3.2_1/lib compilers: Found library directory: -L/usr/local/Cellar/mpich/3.3.2_1/lib compilers: Checking arg -flat_namespace compilers: Unknown arg -flat_namespace compilers: Checking arg -commons compilers: Unknown arg -commons compilers: Checking arg use_dylibs compilers: Unknown arg use_dylibs compilers: Checking arg -multiply_defined compilers: Unknown arg -multiply_defined compilers: Checking arg suppress compilers: Unknown arg suppress compilers: Checking arg -multiply_defined compilers: Unknown arg -multiply_defined compilers: Checking arg suppress compilers: Unknown arg suppress compilers: Checking arg -commons compilers: Unknown arg -commons compilers: Checking arg use_dylibs compilers: Unknown arg use_dylibs compilers: Checking arg -search_paths_first compilers: Unknown arg -search_paths_first compilers: Checking arg -no_compact_unwind compilers: Unknown arg -no_compact_unwind compilers: Checking arg /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers/conftest.o compilers: Unknown arg /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers/conftest.o compilers: Checking arg -ldl compilers: Found library: -ldl compilers: Checking arg -lmpicxx compilers: Found library: -lmpicxx compilers: Checking arg -lmpi compilers: Found library: -lmpi compilers: Checking arg -lpmpi compilers: Found library: -lpmpi compilers: Checking arg -lc++ compilers: Found library: -lc++ compilers: Checking arg -lSystem compilers: Skipping system library: -lSystem compilers: Checking arg /usr/local/Cellar/llvm/10.0.0_3/lib/clang/10.0.0/lib/darwin/libclang_rt.osx.a compilers: Found full library spec: /usr/local/Cellar/llvm/10.0.0_3/lib/clang/10.0.0/lib/darwin/libclang_rt.osx.a compilers: Libraries needed to link Cxx code with another linker: ['-Wl,-rpath,/usr/local/Cellar/mpich/3.3.2_1/lib', '-L/usr/local/Cellar/mpich/3.3.2_1/lib', '-ldl', '-lmpicxx', '-lmpi', '-lpmpi', '-lc++', '/usr/local/Cellar/llvm/10.0.0_3/lib/clang/10.0.0/lib/darwin/libclang_rt.osx.a'] compilers: Check that Cxx libraries can be used with C as linker Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.libraries -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g -O0 -fopenmp /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -c -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.libraries -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers -I/var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.compilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g -O0 -fopenmp /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc -o /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest -Wl,-multiply_defined,suppress -Wl,-multiply_defined -Wl,suppress -Wl,-commons,use_dylibs -Wl,-search_paths_first -Wl,-no_compact_unwind -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -fstack-protector -fno-stack-check -Qunused-arguments -fvisibility=hidden -g -O0 -fopenmp /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/config.setCompilers/conftest.o -Wl,-rpath,/usr/local/Cellar/mpich/3.3.2_1/lib -L/usr/local/Cellar/mpich/3.3.2_1/lib -ldl -lmpicxx -lmpi -lpmpi -lc++ -Wl,-rpath,/usr/local/Cellar/llvm/10.0.0_3/lib/clang/10.0.0/lib/darwin -L/usr/local/Cellar/llvm/10.0.0_3/lib/clang/10.0.0/lib/darwin -lclang_rt.osx -ldl Possible ERROR while running linker: exit code 1 stderr: ld: library not found for -lomp clang-10: error: linker command failed with exit code 1 (use -v to see invocation) compilers: Cxx libraries cannot directly be used with C as linker compilers: Error message from compiling {Cannot compile/link C with /usr/local/Cellar/mpich/3.3.2_1/bin/mpicc.} **** Configure header /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/confdefs.h **** #if !defined(INCLUDED_UNKNOWN) #define INCLUDED_UNKNOWN #define PETSC_CLANGUAGE_CXX 1 #define PETSC_CXX_INLINE inline #define PETSC_CXX_RESTRICT __restrict #define PETSC_C_INLINE inline #define PETSC_C_RESTRICT __restrict #define PETSC_DO_NOT_SWAP_CHILD_FOR_DEBUGGER 1 #define PETSC_HAVE_CXX_DIALECT_CXX11 1 #define PETSC_HAVE_DLFCN_H 1 #define PETSC_HAVE_DYNAMIC_LIBRARIES 1 #define PETSC_USE_DEBUGGER "lldb" #define PETSC_USE_SHARED_LIBRARIES 1 #define PETSC_VERSION_BRANCH_GIT "adams/feature-dmplex-snes-landau-kokkos" #define PETSC_VERSION_DATE_GIT "2020-07-15 07:07:38 -0400" #define PETSC_VERSION_GIT "v3.13.3-738-gc22d235c54" #endif **** C specific Configure header /var/folders/sw/67cq0mmx43g93vrb5xkf1j7c0000gn/T/petsc-rW224n/conffix.h **** #if !defined(INCLUDED_UNKNOWN) #define INCLUDED_UNKNOWN #if defined(__cplusplus) extern "C" { } #else #endif #endif ******************************************************************************* UNABLE to CONFIGURE with GIVEN OPTIONS (see configure.log for details): ------------------------------------------------------------------------------- Cxx libraries cannot directly be used with C as linker. If you don't need the C++ compiler to build external packages or for you application you can run ./configure with --with-cxx=0. Otherwise you need a different combination of C and C++ compilers ******************************************************************************* File "/Users/markadams/Codes/petsc/config/configure.py", line 452, in petsc_configure framework.configure(out = sys.stdout) File "/Users/markadams/Codes/petsc/config/BuildSystem/config/framework.py", line 1247, in configure self.processChildren() File "/Users/markadams/Codes/petsc/config/BuildSystem/config/framework.py", line 1236, in processChildren self.serialEvaluation(self.childGraph) File "/Users/markadams/Codes/petsc/config/BuildSystem/config/framework.py", line 1211, in serialEvaluation child.configure() File "/Users/markadams/Codes/petsc/config/BuildSystem/config/compilers.py", line 1457, in configure self.executeTest(self.checkCxxLibraries) File "/Users/markadams/Codes/petsc/config/BuildSystem/config/base.py", line 139, in executeTest ret = test(*args,**kargs) File "/Users/markadams/Codes/petsc/config/BuildSystem/config/compilers.py", line 784, in checkCxxLibraries ./configure with --with-cxx=0. Otherwise you need a different combination of C and C++ compilers") ================================================================================ Finishing configure run at Thu, 16 Jul 2020 12:57:57 -0400 ================================================================================