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I will try this, thanks!</div>
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Steve<br>
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<div id="divRplyFwdMsg" dir="ltr"><font face="Calibri, sans-serif" style="font-size:11pt" color="#000000"><b>From:</b> Junchao Zhang <junchao.zhang@gmail.com><br>
<b>Sent:</b> Thursday, June 4, 2020 3:50 PM<br>
<b>To:</b> Hudson, Stephen Tobias P <shudson@anl.gov><br>
<b>Cc:</b> Balay, Satish <balay@mcs.anl.gov>; petsc-users@mcs.anl.gov <petsc-users@mcs.anl.gov><br>
<b>Subject:</b> Re: [petsc-users] Terminating a process running petsc via petsc4py without mpi_abort</font>
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<div>Hi, Steve,</div>
<div> Try this branch jczhang/let-signal-handler-call-exit to see if it fixed your problem. If yes, vote for it at <a href="https://gitlab.com/petsc/petsc/-/merge_requests/2745">https://gitlab.com/petsc/petsc/-/merge_requests/2745</a> :)</div>
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<div>--Junchao Zhang<br>
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<div dir="ltr" class="x_gmail_attr">On Thu, Jun 4, 2020 at 3:40 PM Hudson, Stephen Tobias P via petsc-users <<a href="mailto:petsc-users@mcs.anl.gov">petsc-users@mcs.anl.gov</a>> wrote:<br>
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Lisandro,<br>
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I don't see an interface to set this through petsc4py. Is it possible?</div>
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Thanks,</div>
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Steve<br>
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<div id="x_gmail-m_-5581031247200140198divRplyFwdMsg" dir="ltr"><font face="Calibri, sans-serif" color="#000000" style="font-size:11pt"><b>From:</b> Hudson, Stephen Tobias P <<a href="mailto:shudson@anl.gov" target="_blank">shudson@anl.gov</a>><br>
<b>Sent:</b> Thursday, June 4, 2020 2:47 PM<br>
<b>To:</b> Balay, Satish <<a href="mailto:balay@mcs.anl.gov" target="_blank">balay@mcs.anl.gov</a>><br>
<b>Cc:</b> <a href="mailto:petsc-users@mcs.anl.gov" target="_blank">petsc-users@mcs.anl.gov</a> <<a href="mailto:petsc-users@mcs.anl.gov" target="_blank">petsc-users@mcs.anl.gov</a>>; Lisandro Dalcin <<a href="mailto:dalcinl@gmail.com" target="_blank">dalcinl@gmail.com</a>><br>
<b>Subject:</b> Re: Terminating a process running petsc via petsc4py without mpi_abort</font>
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Sounds good. I will have a look at how to set this through petsc4py.</div>
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Thanks</div>
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Steve<br>
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<div id="x_gmail-m_-5581031247200140198x_divRplyFwdMsg" dir="ltr"><font face="Calibri, sans-serif" color="#000000" style="font-size:11pt"><b>From:</b> Satish Balay <<a href="mailto:balay@mcs.anl.gov" target="_blank">balay@mcs.anl.gov</a>><br>
<b>Sent:</b> Thursday, June 4, 2020 2:32 PM<br>
<b>To:</b> Hudson, Stephen Tobias P <<a href="mailto:shudson@anl.gov" target="_blank">shudson@anl.gov</a>><br>
<b>Cc:</b> <a href="mailto:petsc-users@mcs.anl.gov" target="_blank">petsc-users@mcs.anl.gov</a> <<a href="mailto:petsc-users@mcs.anl.gov" target="_blank">petsc-users@mcs.anl.gov</a>>; Lisandro Dalcin <<a href="mailto:dalcinl@gmail.com" target="_blank">dalcinl@gmail.com</a>><br>
<b>Subject:</b> Re: Terminating a process running petsc via petsc4py without mpi_abort</font>
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<div>I don't completely understand the issue here. How is sequential run different than parallel run?<br>
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In both cases - a PetscErrorHandler is likely getting invoked. One can change this behavior with:<br>
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<a href="https://www.mcs.anl.gov/petsc/petsc-current/docs/manualpages/Sys/PetscPushErrorHandler.html" target="_blank">https://www.mcs.anl.gov/petsc/petsc-current/docs/manualpages/Sys/PetscPushErrorHandler.html</a><br>
<br>
And there are a few default error handlers to choose<br>
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PETSC_EXTERN PetscErrorCode PetscTraceBackErrorHandler(MPI_Comm,int,const char*,const char*,PetscErrorCode,PetscErrorType,const char*,void*);<br>
PETSC_EXTERN PetscErrorCode PetscIgnoreErrorHandler(MPI_Comm,int,const char*,const char*,PetscErrorCode,PetscErrorType,const char*,void*);<br>
PETSC_EXTERN PetscErrorCode PetscEmacsClientErrorHandler(MPI_Comm,int,const char*,const char*,PetscErrorCode,PetscErrorType,const char*,void*);<br>
PETSC_EXTERN PetscErrorCode PetscMPIAbortErrorHandler(MPI_Comm,int,const char*,const char*,PetscErrorCode,PetscErrorType,const char*,void*);<br>
PETSC_EXTERN PetscErrorCode PetscAbortErrorHandler(MPI_Comm,int,const char*,const char*,PetscErrorCode,PetscErrorType,const char*,void*);<br>
PETSC_EXTERN PetscErrorCode PetscAttachDebuggerErrorHandler(MPI_Comm,int,const char*,const char*,PetscErrorCode,PetscErrorType,const char*,void*);<br>
PETSC_EXTERN PetscErrorCode PetscReturnErrorHandler(MPI_Comm,int,const char*,const char*,PetscErrorCode,PetscErrorType,const char*,void*);<br>
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Some of the are accessible via command line option. for ex: -on_error_abort or -on_error_mpiabort<br>
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Or perhaps you want to completely disable error handler with: -no_signal_handler<br>
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cc: petsc-users<br>
<br>
Satish<br>
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On Thu, 4 Jun 2020, Hudson, Stephen Tobias P wrote:<br>
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> Satish,<br>
> <br>
> We are having issues caused by MPI_abort getting called when we try to terminate a sub-process running petsc4py. Ideally we would always use a serial build of petsc/petsc4py in this mode, but many users will have a parallel build. We need to be able to send
a terminate signal that just kills the process.<br>
> <br>
> Is there a way to turn off the mpi_abort?<br>
> <br>
> Thanks,<br>
> <br>
> Steve<br>
> <br>
> <br>
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