================================================================================ ================================================================================ Starting configure run at Mon, 30 Mar 2020 19:39:08 -0500 Configure Options: --configModules=PETSc.Configure --optionsModule=config.compilerOptions --with-cc="win32fe icl" --with-fc="win32fe ifort" --with-cxx="win32fe icl" --with-petsc-arch=arch-win64-release-intel-mpi --prefix=/cygdrive/c/cygwin_cache/petsc-3.12.4-release-win-64bit-intel-mpi --with-blaslapack-dir="/cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/mkl/lib/intel64" --with-mpi-include="/cygdrive/c/Program Files (x86)/IntelSWTools/mpi/2019.6.166/intel64/include" --with-mpi-lib="/cygdrive/c/Program Files (x86)/IntelSWTools/mpi/2019.6.166/intel64/lib/impicxx.lib" --with-mpi-compilers=0 --with-debugging=0 --useThreads=0 --with-x=0 --with-x11=0 --with-xt=0 --with-shared-libraries=0 Working directory: /cygdrive/c/cygwin_cache/petsc-3.12.4 Machine platform: ('CYGWIN_NT-10.0-17763', 'HOTCWX2403', '3.1.4-340.x86_64', '2020-02-19 08:49 UTC', 'x86_64', '') Python version: 2.7.16 (default, Mar 20 2019, 12:15:19) [GCC 7.4.0] ================================================================================ ================================================================================ TEST configureExternalPackagesDir from config.framework(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/framework.py:911) TESTING: configureExternalPackagesDir from config.framework(config/BuildSystem/config/framework.py:911) ================================================================================ TEST configureDebuggers from config.utilities.debuggers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/utilities/debuggers.py:21) TESTING: configureDebuggers from config.utilities.debuggers(config/BuildSystem/config/utilities/debuggers.py:21) Find a default debugger and determine its arguments Executing: uname -s stdout: CYGWIN_NT-10.0 Checking for program /usr/bin/gdb...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/bin/intel64/gdb...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64/compiler/gdb...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64_win/compiler/gdb...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/Common7/IDE/CommonExtensions/Microsoft/TestWindow/gdb...not found Checking for program /cygdrive/c/Program Files (x86)/MSBuild/12.0/bin/amd64/gdb...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/VC/BIN/amd64/gdb...not found Checking for program /cygdrive/c/WINDOWS/Microsoft.NET/Framework64/v4.0.30319/gdb...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/VC/VCPackages/gdb...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/Common7/IDE/gdb...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/Common7/Tools/gdb...not found Checking for program /cygdrive/c/Program Files (x86)/HTML Help Workshop/gdb...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/Team Tools/Performance Tools/x64/gdb...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/Team Tools/Performance Tools/gdb...not found Checking for program /cygdrive/c/Program Files (x86)/Windows Kits/8.1/bin/x64/gdb...not found Checking for program /cygdrive/c/Program Files (x86)/Windows Kits/8.1/bin/x86/gdb...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft SDKs/Windows/v8.1A/bin/NETFX 4.5.1 Tools/x64/gdb...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/mpi/intel64/bin/gdb...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/debugger_2018/gdb/intel64/bin/gdb...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/debugger_2018/libipt/intel64/lib/gdb...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64/ipp/gdb...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64_win/mkl/gdb...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64_win/compiler/gdb...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64/tbb/vc12/gdb...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64/tbb/vc12/gdb...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64_win/daal/gdb...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64_win/tbb/vc_mt/gdb...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/Advisor 2018/bin32/gdb...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/VTune Amplifier 2018/bin64/gdb...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/Inspector 2018/bin32/gdb...not found Checking for program /cygdrive/c/Program Files (x86)/Common Files/Intel/Shared Libraries/redist/intel64_win/mpirt/gdb...not found Checking for program /cygdrive/c/Program Files (x86)/Common Files/Intel/Shared Libraries/redist/ia32_win/mpirt/gdb...not found Checking for program /cygdrive/c/Program Files (x86)/Common Files/Intel/Shared Libraries/redist/intel64_win/compiler/gdb...not found Checking for program /cygdrive/c/Program Files (x86)/Common Files/Intel/Shared Libraries/redist/ia32_win/compiler/gdb...not found Checking for program /cygdrive/c/Program Files (x86)/Common Files/Oracle/Java/javapath/gdb...not found Checking for program /cygdrive/c/ProgramData/Oracle/Java/javapath/gdb...not found Checking for program /cygdrive/c/Common/Oracle/InstantClient112x64/bin/gdb...not found Checking for program /cygdrive/c/Common/Oracle/InstantClient112x86/bin/gdb...not found Checking for program /cygdrive/c/Common/Oracle/InstantClient112x86/gdb...not found Checking for program /cygdrive/c/Common/Oracle/InstantClient112x64/gdb...not found Checking for program /cygdrive/c/WINDOWS/system32/gdb...not found Checking for program /cygdrive/c/WINDOWS/gdb...not found Checking for program /cygdrive/c/WINDOWS/System32/Wbem/gdb...not found Checking for program /cygdrive/c/WINDOWS/System32/WindowsPowerShell/v1.0/gdb...not found Checking for program /cygdrive/c/WINDOWS/System32/OpenSSH/gdb...not found Checking for program /cygdrive/c/Program Files (x86)/BBWin/bin/gdb...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft SQL Server/90/Tools/binn/gdb...not found Checking for program /cygdrive/c/APPS/PE/bin/gdb...not found Checking for program /cygdrive/c/Program Files (x86)/Java/jre6/bin/gdb...not found Checking for program /cygdrive/c/APPS/PE/efclient/bin/gdb...not found Checking for program /cygdrive/c/Program Files/TortoiseSVN/bin/gdb...not found Checking for program /cygdrive/c/Program Files (x86)/Windows Kits/8.1/Windows Performance Toolkit/gdb...not found Checking for program /cygdrive/c/Program Files/Microsoft SQL Server/110/Tools/Binn/gdb...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft SDKs/TypeScript/1.0/gdb...not found Checking for program /cygdrive/c/Program Files/Microsoft SQL Server/120/Tools/Binn/gdb...not found Checking for program /cygdrive/c/Users/qlu/AppData/Local/Microsoft/WindowsApp/gdb...not found Checking for program /cygdrive/c/Program Files/mpich2x64/lib"/gdb...not found Checking for program /usr/bin/dbx...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/bin/intel64/dbx...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64/compiler/dbx...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64_win/compiler/dbx...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/Common7/IDE/CommonExtensions/Microsoft/TestWindow/dbx...not found Checking for program /cygdrive/c/Program Files (x86)/MSBuild/12.0/bin/amd64/dbx...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/VC/BIN/amd64/dbx...not found Checking for program /cygdrive/c/WINDOWS/Microsoft.NET/Framework64/v4.0.30319/dbx...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/VC/VCPackages/dbx...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/Common7/IDE/dbx...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/Common7/Tools/dbx...not found Checking for program /cygdrive/c/Program Files (x86)/HTML Help Workshop/dbx...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/Team Tools/Performance Tools/x64/dbx...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/Team Tools/Performance Tools/dbx...not found Checking for program /cygdrive/c/Program Files (x86)/Windows Kits/8.1/bin/x64/dbx...not found Checking for program /cygdrive/c/Program Files (x86)/Windows Kits/8.1/bin/x86/dbx...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft SDKs/Windows/v8.1A/bin/NETFX 4.5.1 Tools/x64/dbx...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/mpi/intel64/bin/dbx...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/debugger_2018/gdb/intel64/bin/dbx...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/debugger_2018/libipt/intel64/lib/dbx...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64/ipp/dbx...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64_win/mkl/dbx...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64_win/compiler/dbx...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64/tbb/vc12/dbx...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64/tbb/vc12/dbx...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64_win/daal/dbx...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64_win/tbb/vc_mt/dbx...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/Advisor 2018/bin32/dbx...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/VTune Amplifier 2018/bin64/dbx...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/Inspector 2018/bin32/dbx...not found Checking for program /cygdrive/c/Program Files (x86)/Common Files/Intel/Shared Libraries/redist/intel64_win/mpirt/dbx...not found Checking for program /cygdrive/c/Program Files (x86)/Common Files/Intel/Shared Libraries/redist/ia32_win/mpirt/dbx...not found Checking for program /cygdrive/c/Program Files (x86)/Common Files/Intel/Shared Libraries/redist/intel64_win/compiler/dbx...not found Checking for program /cygdrive/c/Program Files (x86)/Common Files/Intel/Shared Libraries/redist/ia32_win/compiler/dbx...not found Checking for program /cygdrive/c/Program Files (x86)/Common Files/Oracle/Java/javapath/dbx...not found Checking for program /cygdrive/c/ProgramData/Oracle/Java/javapath/dbx...not found Checking for program /cygdrive/c/Common/Oracle/InstantClient112x64/bin/dbx...not found Checking for program /cygdrive/c/Common/Oracle/InstantClient112x86/bin/dbx...not found Checking for program /cygdrive/c/Common/Oracle/InstantClient112x86/dbx...not found Checking for program /cygdrive/c/Common/Oracle/InstantClient112x64/dbx...not found Checking for program /cygdrive/c/WINDOWS/system32/dbx...not found Checking for program /cygdrive/c/WINDOWS/dbx...not found Checking for program /cygdrive/c/WINDOWS/System32/Wbem/dbx...not found Checking for program /cygdrive/c/WINDOWS/System32/WindowsPowerShell/v1.0/dbx...not found Checking for program /cygdrive/c/WINDOWS/System32/OpenSSH/dbx...not found Checking for program /cygdrive/c/Program Files (x86)/BBWin/bin/dbx...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft SQL Server/90/Tools/binn/dbx...not found Checking for program /cygdrive/c/APPS/PE/bin/dbx...not found Checking for program /cygdrive/c/Program Files (x86)/Java/jre6/bin/dbx...not found Checking for program /cygdrive/c/APPS/PE/efclient/bin/dbx...not found Checking for program /cygdrive/c/Program Files/TortoiseSVN/bin/dbx...not found Checking for program /cygdrive/c/Program Files (x86)/Windows Kits/8.1/Windows Performance Toolkit/dbx...not found Checking for program /cygdrive/c/Program Files/Microsoft SQL Server/110/Tools/Binn/dbx...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft SDKs/TypeScript/1.0/dbx...not found Checking for program /cygdrive/c/Program Files/Microsoft SQL Server/120/Tools/Binn/dbx...not found Checking for program /cygdrive/c/Users/qlu/AppData/Local/Microsoft/WindowsApp/dbx...not found Checking for program /cygdrive/c/Program Files/mpich2x64/lib"/dbx...not found Executing: uname -s stdout: CYGWIN_NT-10.0 Defined make macro "DSYMUTIL" to "true" child config.utilities.debuggers 0.881856 ================================================================================ TEST configureDirectories from PETSc.options.petscdir(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/PETSc/options/petscdir.py:23) TESTING: configureDirectories from PETSc.options.petscdir(config/PETSc/options/petscdir.py:23) Checks PETSC_DIR and sets if not set Version Information: #define PETSC_VERSION_RELEASE 1 #define PETSC_VERSION_MAJOR 3 #define PETSC_VERSION_MINOR 12 #define PETSC_VERSION_SUBMINOR 4 #define PETSC_VERSION_PATCH 0 #define PETSC_VERSION_DATE "Feb, 04, 2020" #define PETSC_VERSION_GIT "v3.12.4" #define PETSC_VERSION_DATE_GIT "2020-02-04 09:25:02 -0600" #define PETSC_VERSION_EQ(MAJOR,MINOR,SUBMINOR) \ #define PETSC_VERSION_ PETSC_VERSION_EQ #define PETSC_VERSION_LT(MAJOR,MINOR,SUBMINOR) \ #define PETSC_VERSION_LE(MAJOR,MINOR,SUBMINOR) \ #define PETSC_VERSION_GT(MAJOR,MINOR,SUBMINOR) \ #define PETSC_VERSION_GE(MAJOR,MINOR,SUBMINOR) \ child PETSc.options.petscdir 0.034459 ================================================================================ TEST getDatafilespath from PETSc.options.dataFilesPath(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/PETSc/options/dataFilesPath.py:29) TESTING: getDatafilespath from PETSc.options.dataFilesPath(config/PETSc/options/dataFilesPath.py:29) Checks what DATAFILESPATH should be child PETSc.options.dataFilesPath 0.002082 ================================================================================ TEST configureGit from config.sourceControl(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/sourceControl.py:24) TESTING: configureGit from config.sourceControl(config/BuildSystem/config/sourceControl.py:24) Find the Git executable Checking for program /usr/bin/git...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/bin/intel64/git...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64/compiler/git...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64_win/compiler/git...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/Common7/IDE/CommonExtensions/Microsoft/TestWindow/git...not found Checking for program /cygdrive/c/Program Files (x86)/MSBuild/12.0/bin/amd64/git...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/VC/BIN/amd64/git...not found Checking for program /cygdrive/c/WINDOWS/Microsoft.NET/Framework64/v4.0.30319/git...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/VC/VCPackages/git...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/Common7/IDE/git...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/Common7/Tools/git...not found Checking for program /cygdrive/c/Program Files (x86)/HTML Help Workshop/git...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/Team Tools/Performance Tools/x64/git...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/Team Tools/Performance Tools/git...not found Checking for program /cygdrive/c/Program Files (x86)/Windows Kits/8.1/bin/x64/git...not found Checking for program /cygdrive/c/Program Files (x86)/Windows Kits/8.1/bin/x86/git...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft SDKs/Windows/v8.1A/bin/NETFX 4.5.1 Tools/x64/git...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/mpi/intel64/bin/git...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/debugger_2018/gdb/intel64/bin/git...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/debugger_2018/libipt/intel64/lib/git...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64/ipp/git...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64_win/mkl/git...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64_win/compiler/git...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64/tbb/vc12/git...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64/tbb/vc12/git...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64_win/daal/git...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64_win/tbb/vc_mt/git...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/Advisor 2018/bin32/git...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/VTune Amplifier 2018/bin64/git...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/Inspector 2018/bin32/git...not found Checking for program /cygdrive/c/Program Files (x86)/Common Files/Intel/Shared Libraries/redist/intel64_win/mpirt/git...not found Checking for program /cygdrive/c/Program Files (x86)/Common Files/Intel/Shared Libraries/redist/ia32_win/mpirt/git...not found Checking for program /cygdrive/c/Program Files (x86)/Common Files/Intel/Shared Libraries/redist/intel64_win/compiler/git...not found Checking for program /cygdrive/c/Program Files (x86)/Common Files/Intel/Shared Libraries/redist/ia32_win/compiler/git...not found Checking for program /cygdrive/c/Program Files (x86)/Common Files/Oracle/Java/javapath/git...not found Checking for program /cygdrive/c/ProgramData/Oracle/Java/javapath/git...not found Checking for program /cygdrive/c/Common/Oracle/InstantClient112x64/bin/git...not found Checking for program /cygdrive/c/Common/Oracle/InstantClient112x86/bin/git...not found Checking for program /cygdrive/c/Common/Oracle/InstantClient112x86/git...not found Checking for program /cygdrive/c/Common/Oracle/InstantClient112x64/git...not found Checking for program /cygdrive/c/WINDOWS/system32/git...not found Checking for program /cygdrive/c/WINDOWS/git...not found Checking for program /cygdrive/c/WINDOWS/System32/Wbem/git...not found Checking for program /cygdrive/c/WINDOWS/System32/WindowsPowerShell/v1.0/git...not found Checking for program /cygdrive/c/WINDOWS/System32/OpenSSH/git...not found Checking for program /cygdrive/c/Program Files (x86)/BBWin/bin/git...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft SQL Server/90/Tools/binn/git...not found Checking for program /cygdrive/c/APPS/PE/bin/git...not found Checking for program /cygdrive/c/Program Files (x86)/Java/jre6/bin/git...not found Checking for program /cygdrive/c/APPS/PE/efclient/bin/git...not found Checking for program /cygdrive/c/Program Files/TortoiseSVN/bin/git...not found Checking for program /cygdrive/c/Program Files (x86)/Windows Kits/8.1/Windows Performance Toolkit/git...not found Checking for program /cygdrive/c/Program Files/Microsoft SQL Server/110/Tools/Binn/git...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft SDKs/TypeScript/1.0/git...not found Checking for program /cygdrive/c/Program Files/Microsoft SQL Server/120/Tools/Binn/git...not found Checking for program /cygdrive/c/Users/qlu/AppData/Local/Microsoft/WindowsApp/git...not found Checking for program /cygdrive/c/Program Files/mpich2x64/lib"/git...not found Checking for program /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/git...not found child config.sourceControl 0.026803 ================================================================================ TEST configureInstallationMethod from PETSc.options.petscclone(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/PETSc/options/petscclone.py:20) TESTING: configureInstallationMethod from PETSc.options.petscclone(config/PETSc/options/petscclone.py:20) This is a tarball installation child PETSc.options.petscclone 0.003670 ================================================================================ TEST setNativeArchitecture from PETSc.options.arch(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/PETSc/options/arch.py:31) TESTING: setNativeArchitecture from PETSc.options.arch(config/PETSc/options/arch.py:31) ================================================================================ TEST configureArchitecture from PETSc.options.arch(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/PETSc/options/arch.py:43) TESTING: configureArchitecture from PETSc.options.arch(config/PETSc/options/arch.py:43) Checks PETSC_ARCH and sets if not set No previous hashfile found Setting hashfile: arch-win64-release-intel-mpi/lib/petsc/conf/configure-hash Deleting configure hash file: arch-win64-release-intel-mpi/lib/petsc/conf/configure-hash Unable to delete configure hash file: arch-win64-release-intel-mpi/lib/petsc/conf/configure-hash child PETSc.options.arch 0.231290 ================================================================================ TEST setInstallDir from PETSc.options.installDir(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/PETSc/options/installDir.py:35) TESTING: setInstallDir from PETSc.options.installDir(config/PETSc/options/installDir.py:35) setup installDir to either prefix or if that is not set to PETSC_DIR/PETSC_ARCH Defined make macro "PREFIXDIR" to "/cygdrive/c/cygwin_cache/petsc-3.12.4-release-win-64bit-intel-mpi" ================================================================================ TEST saveReconfigure from PETSc.options.installDir(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/PETSc/options/installDir.py:80) TESTING: saveReconfigure from PETSc.options.installDir(config/PETSc/options/installDir.py:80) ================================================================================ TEST cleanConfDir from PETSc.options.installDir(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/PETSc/options/installDir.py:73) TESTING: cleanConfDir from PETSc.options.installDir(config/PETSc/options/installDir.py:73) ================================================================================ TEST configureInstallDir from PETSc.options.installDir(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/PETSc/options/installDir.py:57) TESTING: configureInstallDir from PETSc.options.installDir(config/PETSc/options/installDir.py:57) Makes installDir subdirectories if it does not exist for both prefix install location and PETSc work install location Changed persistence directory to /cygdrive/c/cygwin_cache/petsc-3.12.4/arch-win64-release-intel-mpi/lib/petsc/conf ================================================================================ TEST restoreReconfigure from PETSc.options.installDir(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/PETSc/options/installDir.py:93) TESTING: restoreReconfigure from PETSc.options.installDir(config/PETSc/options/installDir.py:93) child PETSc.options.installDir 0.013582 ================================================================================ TEST setExternalPackagesDir from PETSc.options.externalpackagesdir(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/PETSc/options/externalpackagesdir.py:15) TESTING: setExternalPackagesDir from PETSc.options.externalpackagesdir(config/PETSc/options/externalpackagesdir.py:15) ================================================================================ TEST cleanExternalpackagesDir from PETSc.options.externalpackagesdir(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/PETSc/options/externalpackagesdir.py:22) TESTING: cleanExternalpackagesDir from PETSc.options.externalpackagesdir(config/PETSc/options/externalpackagesdir.py:22) child PETSc.options.externalpackagesdir 0.000834 ================================================================================ TEST configureCLanguage from PETSc.options.languages(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/PETSc/options/languages.py:27) TESTING: configureCLanguage from PETSc.options.languages(config/PETSc/options/languages.py:27) Choose whether to compile the PETSc library using a C or C++ compiler C language is C Defined "CLANGUAGE_C" to "1" child PETSc.options.languages 0.005075 ================================================================================ TEST printEnvVariables from config.setCompilers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/setCompilers.py:1724) TESTING: printEnvVariables from config.setCompilers(config/BuildSystem/config/setCompilers.py:1724) **** printenv **** LIB=C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2018.5.274\windows\compiler\lib;C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2018.5.274\windows\compiler\lib\intel64;C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2018.5.274\windows\compiler\lib\intel64_win;C:\Program Files (x86)\Microsoft Visual Studio 12.0\VC\LIB\amd64;C:\Program Files (x86)\Microsoft Visual Studio 12.0\VC\ATLMFC\LIB\amd64;C:\Program Files (x86)\Windows Kits\8.1\lib\winv6.3\um\x64;C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2018.5.274\windows\mpi\intel64\bin\..\..\intel64\lib;C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2018.5.274\windows\ipp\lib\intel64;C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2018.5.274\windows\mkl\lib\intel64_win;C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2018.5.274\windows\compiler\lib\intel64_win;C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2018.5.274\windows\tbb\bin\..\lib\intel64\vc12;C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2018.5.274\windows\tbb\bin\..\lib\intel64\vc12;C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2018.5.274\windows\daal\lib\intel64_win;C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2018.5.274\windows\tbb\lib\intel64_win\vc_mt; DEFLOGDIR=C:\ProgramData\McAfee\Endpoint Security\Logs COMPUTERNAME=HOTCWX2403 SCRIPT_NAME=compilervars_arch.bat SYSTEMROOT=C:\WINDOWS WIN_TITLE_ARCH=Intel(R) 64 PRODUCT_NAME=Intel Compiler 18.0 Update 5 DriverData=C:\Windows\System32\Drivers\DriverData PSTL_TARGET_VS=vs2013 WindowsSDK_ExecutablePath_x86=C:\Program Files (x86)\Microsoft SDKs\Windows\v8.1A\bin\NETFX 4.5.1 Tools\ CommonProgramFiles(x86)=C:\Program Files (x86)\Common Files INTELGTDEBUGGERROOT=C:\Program Files (x86)\IntelSWTools\debugger_2018\gdb\intel64_igfx\ FrameworkVersion64=v4.0.30319 TBBROOT=C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2018.5.274\windows\tbb\bin\.. UATDATA=C:\WINDOWS\CCM\UATData\D9F8C395-CAB8-491d-B8AC-179A1FE1BE77 NDK_DIR="" pw_lic_file=C:\Program Files (x86)\MKS Toolkit COMSPEC=C:\WINDOWS\system32\cmd.exe PYTHONPATH=C:\Program Files (x86)\IntelSWTools\Advisor 2018\\pythonapi ARCH_PATH=intel64 HOMEPATH=\Users\qlu TARGET_ARCH=intel64 ICPP_COMPILER18=C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2018.5.274\windows\ EFCLIENT_HOME=C:\APPS\PE\efclient HOMEDRIVE=C: MKLROOT=C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2018.5.274\windows\mkl FrameworkVersion=v4.0.30319 SYSTEMDRIVE=C: INTEL_LICENSE_FILE=C:\Program Files (x86)\Common Files\Intel\Licenses PROCESSOR_LEVEL=6 OS=Windows_NT FSHARPINSTALLDIR=C:\Program Files (x86)\Microsoft SDKs\F#\3.1\Framework\v4.0\ PRODUCT_NAME_FULL=Intel(R) Compiler 18.0 Update 5 (package 274) MSVS_VAR_SCRIPT="C:\Program Files (x86)\Microsoft Visual Studio 12.0\Common7\Tools\..\..\VC\vcvarsall.bat" TARGET_VS=vs2013 OneDrive=C:\Users\qlu\OneDrive Platform=X64 CPATH=C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2018.5.274\windows\ipp\include;C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2018.5.274\windows\mkl\include;C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2018.5.274\windows\pstl\bin\..\include;C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2018.5.274\windows\tbb\bin\..\include;C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2018.5.274\windows\tbb\bin\..\include;C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2018.5.274\windows\daal\include; CommandPromptType=Native !C:=C:\Program Files (x86)\IntelSWTools IFORT_COMPILER18=C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2018.5.274\windows\ TBB_CXX=icl.exe Framework40Version=v4.0 TBB_TARGET_ARCH=intel64 TEMP=/cygdrive/c/Users/qlu/AppData/Local/Temp SHLVL=1 VTUNE_AMPLIFIER_2018_DIR=C:\Program Files (x86)\IntelSWTools\VTune Amplifier 2018\ MIC_LD_LIBRARY_PATH=C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2018.5.274\windows\compiler\lib\mic;C:\Program Files (x86)\Common Files\Intel\Shared Libraries\compiler\lib\intel64_win_mic PETSC_DIR=/cygdrive/c/cygwin_cache/petsc-3.12.4 PE=C:\APPS\PE\ IPM_32DIR=C:\Program Files (x86)\Petroleum Experts\IPM 11 WindowsSdkDir=C:\Program Files (x86)\Windows Kits\8.1\ ROOT=C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2018.5.274\windows LOGONSERVER=\\HOCWDCP0002 C_TARGET_ARCH=intel64 CLASSPATH=C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2018.5.274\windows\daal\lib\daal.jar; MSVS_VAR_SCRIPT_DIR=C:\Program Files (x86)\Microsoft Visual Studio 12.0\VC ROOT_ROOT_NAME=windows SESSIONNAME=RDP-Tcp#4 nutcroot=C:\Program Files (x86)\MKS Toolkit INCLUDE=C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2018.5.274\windows\compiler\include;C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2018.5.274\windows\compiler\include\intel64;C:\Program Files (x86)\Microsoft Visual Studio 12.0\VC\INCLUDE;C:\Program Files (x86)\Microsoft Visual Studio 12.0\VC\ATLMFC\INCLUDE;C:\Program Files (x86)\Windows Kits\8.1\include\shared;C:\Program Files (x86)\Windows Kits\8.1\include\um;C:\Program Files (x86)\Windows Kits\8.1\include\winrt;C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2018.5.274\windows\mpi\intel64\bin\..\..\intel64\include;C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2018.5.274\windows\ipp\include;C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2018.5.274\windows\mkl\include;C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2018.5.274\windows\pstl\bin\..\include;C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2018.5.274\windows\tbb\bin\..\include;C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2018.5.274\windows\tbb\bin\..\include;C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2018.5.274\windows\daal\include; CLIENTNAME=HOU-WX493607420 LIBRARY_PATH=C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2018.5.274\windows\ipp\lib\intel64;C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2018.5.274\windows\tbb\bin\..\..\..\linux\tbb\lib\intel64\gcc4.7;C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2018.5.274\windows\tbb\bin\..\..\..\linux\tbb\lib\intel64\gcc4.7; APPDATA=C:\Users\qlu\AppData\Roaming INSPECTOR_2018_DIR=C:\Program Files (x86)\IntelSWTools\Inspector 2018\ PUBLIC=C:\Users\Public TBB_BIN_DIR=C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2018.5.274\windows\tbb\bin\ TMP=/cygdrive/c/Users/qlu/AppData/Local/Temp PSModulePath=C:\Program Files\WindowsPowerShell\Modules;C:\WINDOWS\system32\WindowsPowerShell\v1.0\Modules;C:\Program Files (x86)\Microsoft Azure Information Protection\Powershell VS110COMNTOOLS=C:\Program Files (x86)\Microsoft Visual Studio 11.0\Common7\Tools\ USERDOMAIN=CONOCO IPM11_32DIR=C:\Program Files (x86)\Petroleum Experts\IPM 11 __MS_VC_INSTALL_PATH=C:\Program Files (x86)\Microsoft Visual Studio 12.0\Common7\Tools\..\..\VC COMMONPROGRAMFILES=C:\Program Files\Common Files PKG_CONFIG_PATH=C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2018.5.274\windows\mkl\bin\pkgconfig; IPPROOT=C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2018.5.274\windows\ipp COE=C:\ProgramData\COE HOME=/home/qlu LD_LIBRARY_PATH=/cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/linux/compiler/lib/intel64_lin:/cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/linux/tbb/lib/intel64/gcc4.7:/cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/linux/tbb/lib/intel64/gcc4.7:/cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/linux/daal/lib/intel64_lin:/cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/linux/tbb/lib/intel64_lin/gcc4.7:/cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/linux/tbb/lib/intel64_lin/gcc4.4 MIC_LIBRARY_PATH=C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2018.5.274\windows\compiler\lib\mic; ProgramData=C:\ProgramData PROCESSOR_ARCHITECTURE=AMD64 ALLUSERSPROFILE=C:\ProgramData TNS_ADMIN=\\conoco.net\sysvol\conoco.net\scripts\tnsnames _=./configure VisualStudioVersion=12.0 ProgramFiles(x86)=C:\Program Files (x86) ProgramW6432=C:\Program Files USERNAME=qlu FrameworkDIR64=C:\WINDOWS\Microsoft.NET\Framework64 PROMPT=$P$G ADVISOR_2018_DIR=C:\Program Files (x86)\IntelSWTools\Advisor 2018\ INTEL_DEV_REDIST=C:\Program Files (x86)\Common Files\Intel\Shared Libraries\ USERDNSDOMAIN=CONOCO.NET USERDOMAIN_ROAMINGPROFILE=CONOCO PATHEXT=.COM;.EXE;.BAT;.CMD;.VBS;.VBE;.JS;.JSE;.WSF;.WSH;.MSC CommonProgramW6432=C:\Program Files\Common Files WINDIR=C:\WINDOWS FrameworkDir=C:\WINDOWS\Microsoft.NET\Framework64 NUMBER_OF_PROCESSORS=8 WIN_TITLE=Intel Compiler 18.0 Update 5 Intel(R) 64 Visual Studio 2013 TARGET_VS_ARCH=amd64 BIN_ROOT=C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2018.5.274\windows\bin\ USERPROFILE=C:\Users\qlu EXECIGNORE=*.dll LIBPATH=C:\WINDOWS\Microsoft.NET\Framework64\v4.0.30319;C:\Program Files (x86)\Microsoft Visual Studio 12.0\VC\LIB\amd64;C:\Program Files (x86)\Microsoft Visual Studio 12.0\VC\ATLMFC\LIB\amd64;C:\Program Files (x86)\Windows Kits\8.1\References\CommonConfiguration\Neutral;C:\Program Files (x86)\Microsoft SDKs\Windows\v8.1\ExtensionSDKs\Microsoft.VCLibs\12.0\References\CommonConfiguration\neutral; PROCESSOR_IDENTIFIER=Intel64 Family 6 Model 79 Stepping 1, GenuineIntel PROGRAMFILES=C:\Program Files PROCESSOR_REVISION=4f01 PATH=/usr/bin:/cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/bin/intel64:/cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64/compiler:/cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64_win/compiler:/cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/Common7/IDE/CommonExtensions/Microsoft/TestWindow:/cygdrive/c/Program Files (x86)/MSBuild/12.0/bin/amd64:/cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/VC/BIN/amd64:/cygdrive/c/WINDOWS/Microsoft.NET/Framework64/v4.0.30319:/cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/VC/VCPackages:/cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/Common7/IDE:/cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/Common7/Tools:/cygdrive/c/Program Files (x86)/HTML Help Workshop:/cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/Team Tools/Performance Tools/x64:/cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/Team Tools/Performance Tools:/cygdrive/c/Program Files (x86)/Windows Kits/8.1/bin/x64:/cygdrive/c/Program Files (x86)/Windows Kits/8.1/bin/x86:/cygdrive/c/Program Files (x86)/Microsoft SDKs/Windows/v8.1A/bin/NETFX 4.5.1 Tools/x64:/cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/mpi/intel64/bin:/cygdrive/c/Program Files (x86)/IntelSWTools/debugger_2018/gdb/intel64/bin:/cygdrive/c/Program Files (x86)/IntelSWTools/debugger_2018/libipt/intel64/lib:/cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64/ipp:/cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64_win/mkl:/cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64_win/compiler:/cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64/tbb/vc12:/cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64/tbb/vc12:/cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64_win/daal:/cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64_win/tbb/vc_mt:/cygdrive/c/Program Files (x86)/IntelSWTools/Advisor 2018/bin32:/cygdrive/c/Program Files (x86)/IntelSWTools/VTune Amplifier 2018/bin64:/cygdrive/c/Program Files (x86)/IntelSWTools/Inspector 2018/bin32:/cygdrive/c/Program Files (x86)/Common Files/Intel/Shared Libraries/redist/intel64_win/mpirt:/cygdrive/c/Program Files (x86)/Common Files/Intel/Shared Libraries/redist/ia32_win/mpirt:/cygdrive/c/Program Files (x86)/Common Files/Intel/Shared Libraries/redist/intel64_win/compiler:/cygdrive/c/Program Files (x86)/Common Files/Intel/Shared Libraries/redist/ia32_win/compiler:/cygdrive/c/Program Files (x86)/Common Files/Oracle/Java/javapath:/cygdrive/c/ProgramData/Oracle/Java/javapath:/cygdrive/c/Common/Oracle/InstantClient112x64/bin:/cygdrive/c/Common/Oracle/InstantClient112x86/bin:/cygdrive/c/Common/Oracle/InstantClient112x86:/cygdrive/c/Common/Oracle/InstantClient112x64:/cygdrive/c/WINDOWS/system32:/cygdrive/c/WINDOWS:/cygdrive/c/WINDOWS/System32/Wbem:/cygdrive/c/WINDOWS/System32/WindowsPowerShell/v1.0:/cygdrive/c/WINDOWS/System32/OpenSSH:/cygdrive/c/Program Files (x86)/BBWin/bin:/cygdrive/c/Program Files (x86)/Microsoft SQL Server/90/Tools/binn:/cygdrive/c/APPS/PE/bin:/cygdrive/c/Program Files (x86)/Java/jre6/bin:/cygdrive/c/APPS/PE/efclient/bin:/cygdrive/c/Program Files/TortoiseSVN/bin:/cygdrive/c/Program Files (x86)/Windows Kits/8.1/Windows Performance Toolkit:/cygdrive/c/Program Files/Microsoft SQL Server/110/Tools/Binn:/cygdrive/c/Program Files (x86)/Microsoft SDKs/TypeScript/1.0:/cygdrive/c/Program Files/Microsoft SQL Server/120/Tools/Binn:/cygdrive/c/Users/qlu/AppData/Local/Microsoft/WindowsApp:/cygdrive/c/Program Files/mpich2x64/lib" PSTL_TARGET_ARCH=intel64 TERM=xterm PSTL_BIN_DIR=C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2018.5.274\windows\pstl\bin\ PSTLROOT=C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2018.5.274\windows\pstl\bin\.. VSINSTALLDIR=C:\Program Files (x86)\Microsoft Visual Studio 12.0\ IPP_TARGET_ARCH=intel64 LOCALAPPDATA=C:\Users\qlu\AppData\Local WindowsSDK_ExecutablePath_x64=C:\Program Files (x86)\Microsoft SDKs\Windows\v8.1A\bin\NETFX 4.5.1 Tools\x64\ ExtensionSdkDir=C:\Program Files (x86)\Microsoft SDKs\Windows\v8.1\ExtensionSDKs VS120COMNTOOLS=C:\Program Files (x86)\Microsoft Visual Studio 12.0\Common7\Tools\ INTEL_PYTHONPATH=C:\Program Files (x86)\IntelSWTools\Advisor 2018\\pythonapi I_MPI_ROOT=C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2018.5.274\windows\mpi\intel64\bin\..\.. BIN_DIR=bin64 DAALROOT=C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2018.5.274\windows\daal WIN_TITLE_VS=Visual Studio 2013 TBB_TARGET_VS=vc12 OLDPWD=/cygdrive/c/cygwin_cache/petsc-3.12.4/config/examples PWD=/cygdrive/c/cygwin_cache/petsc-3.12.4 VCINSTALLDIR=C:\Program Files (x86)\Microsoft Visual Studio 12.0\VC\ ================================================================================ TEST resetEnvCompilers from config.setCompilers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/setCompilers.py:1731) TESTING: resetEnvCompilers from config.setCompilers(config/BuildSystem/config/setCompilers.py:1731) ================================================================================ TEST checkEnvCompilers from config.setCompilers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/setCompilers.py:1761) TESTING: checkEnvCompilers from config.setCompilers(config/BuildSystem/config/setCompilers.py:1761) ================================================================================ TEST checkMPICompilerOverride from config.setCompilers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/setCompilers.py:1694) TESTING: checkMPICompilerOverride from config.setCompilers(config/BuildSystem/config/setCompilers.py:1694) Check if --with-mpi-dir is used along with CC CXX or FC compiler options. This usually prevents mpi compilers from being used - so issue a warning ================================================================================ TEST requireMpiLdPath from config.setCompilers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/setCompilers.py:1715) TESTING: requireMpiLdPath from config.setCompilers(config/BuildSystem/config/setCompilers.py:1715) OpenMPI wrappers require LD_LIBRARY_PATH set ================================================================================ TEST checkInitialFlags from config.setCompilers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/setCompilers.py:459) TESTING: checkInitialFlags from config.setCompilers(config/BuildSystem/config/setCompilers.py:459) Initialize the compiler and linker flags Initialized CFLAGS to Initialized CFLAGS to Initialized LDFLAGS to Initialized CUDAFLAGS to Initialized CUDAFLAGS to Initialized LDFLAGS to Initialized CXXFLAGS to Initialized CXX_CXXFLAGS to Initialized LDFLAGS to Initialized FFLAGS to Initialized FFLAGS to Initialized LDFLAGS to Initialized CPPFLAGS to Initialized FPPFLAGS to Initialized CUDAPPFLAGS to -Wno-deprecated-gpu-targets Initialized CXXPPFLAGS to Initialized CC_LINKER_FLAGS to [] Initialized CXX_LINKER_FLAGS to [] Initialized FC_LINKER_FLAGS to [] Initialized CUDAC_LINKER_FLAGS to [] Initialized sharedLibraryFlags to [] Initialized dynamicLibraryFlags to [] ================================================================================ TEST checkCCompiler from config.setCompilers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/setCompilers.py:629) TESTING: checkCCompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:629) Locate a functional C compiler Checking for program /usr/bin/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/bin/intel64/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64/compiler/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64_win/compiler/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/Common7/IDE/CommonExtensions/Microsoft/TestWindow/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/MSBuild/12.0/bin/amd64/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/VC/BIN/amd64/win32fe...not found Checking for program /cygdrive/c/WINDOWS/Microsoft.NET/Framework64/v4.0.30319/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/VC/VCPackages/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/Common7/IDE/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/Common7/Tools/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/HTML Help Workshop/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/Team Tools/Performance Tools/x64/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/Team Tools/Performance Tools/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Windows Kits/8.1/bin/x64/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Windows Kits/8.1/bin/x86/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft SDKs/Windows/v8.1A/bin/NETFX 4.5.1 Tools/x64/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/mpi/intel64/bin/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/debugger_2018/gdb/intel64/bin/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/debugger_2018/libipt/intel64/lib/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64/ipp/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64_win/mkl/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64_win/compiler/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64/tbb/vc12/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64/tbb/vc12/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64_win/daal/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64_win/tbb/vc_mt/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/Advisor 2018/bin32/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/VTune Amplifier 2018/bin64/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/Inspector 2018/bin32/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Common Files/Intel/Shared Libraries/redist/intel64_win/mpirt/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Common Files/Intel/Shared Libraries/redist/ia32_win/mpirt/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Common Files/Intel/Shared Libraries/redist/intel64_win/compiler/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Common Files/Intel/Shared Libraries/redist/ia32_win/compiler/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Common Files/Oracle/Java/javapath/win32fe...not found Checking for program /cygdrive/c/ProgramData/Oracle/Java/javapath/win32fe...not found Checking for program /cygdrive/c/Common/Oracle/InstantClient112x64/bin/win32fe...not found Checking for program /cygdrive/c/Common/Oracle/InstantClient112x86/bin/win32fe...not found Checking for program /cygdrive/c/Common/Oracle/InstantClient112x86/win32fe...not found Checking for program /cygdrive/c/Common/Oracle/InstantClient112x64/win32fe...not found Checking for program /cygdrive/c/WINDOWS/system32/win32fe...not found Checking for program /cygdrive/c/WINDOWS/win32fe...not found Checking for program /cygdrive/c/WINDOWS/System32/Wbem/win32fe...not found Checking for program /cygdrive/c/WINDOWS/System32/WindowsPowerShell/v1.0/win32fe...not found Checking for program /cygdrive/c/WINDOWS/System32/OpenSSH/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/BBWin/bin/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft SQL Server/90/Tools/binn/win32fe...not found Checking for program /cygdrive/c/APPS/PE/bin/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Java/jre6/bin/win32fe...not found Checking for program /cygdrive/c/APPS/PE/efclient/bin/win32fe...not found Checking for program /cygdrive/c/Program Files/TortoiseSVN/bin/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Windows Kits/8.1/Windows Performance Toolkit/win32fe...not found Checking for program /cygdrive/c/Program Files/Microsoft SQL Server/110/Tools/Binn/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft SDKs/TypeScript/1.0/win32fe...not found Checking for program /cygdrive/c/Program Files/Microsoft SQL Server/120/Tools/Binn/win32fe...not found Checking for program /cygdrive/c/Users/qlu/AppData/Local/Microsoft/WindowsApp/win32fe...not found Checking for program /cygdrive/c/Program Files/mpich2x64/lib"/win32fe...not found Checking for program /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe...found Defined make macro "CC" to "/cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl" All intermediate test results are stored in /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O All intermediate test results are stored in /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.exe /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.exe /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -lpetsc-ufod4vtr9mqHvKIQiVAm stdout: ipo: error #11018: Cannot open libpetsc-ufod4vtr9mqHvKIQiVAm.lib LINK : fatal error LNK1181: cannot open input file 'libpetsc-ufod4vtr9mqHvKIQiVAm.lib' Possible ERROR while running linker: exit code 157 stdout: ipo: error #11018: Cannot open libpetsc-ufod4vtr9mqHvKIQiVAm.lib LINK : fatal error LNK1181: cannot open input file 'libpetsc-ufod4vtr9mqHvKIQiVAm.lib'Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.exe /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o Testing executable /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.exe to see if it can be run Executing: /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.exe Executing: /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.exe Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl --version stdout: Win32 Development Tool Front End, version 1.11.3 Mon, Feb 27, 2017 11:10:38 AM Intel(R) C++ Intel(R) 64 Compiler for applications running on Intel(R) 64, Version 18.0.5.274 Build 20180823 ================================================================================ TEST checkCPreprocessor from config.setCompilers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/setCompilers.py:666) TESTING: checkCPreprocessor from config.setCompilers(config/BuildSystem/config/setCompilers.py:666) Locate a functional C preprocessor Checking for program /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe...found Defined make macro "CPP" to "/cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E" Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: ================================================================================ TEST checkCUDACompiler from config.setCompilers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/setCompilers.py:704) TESTING: checkCUDACompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:704) Locate a functional CUDA compiler Checking for program /usr/bin/nvcc...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/bin/intel64/nvcc...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64/compiler/nvcc...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64_win/compiler/nvcc...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/Common7/IDE/CommonExtensions/Microsoft/TestWindow/nvcc...not found Checking for program /cygdrive/c/Program Files (x86)/MSBuild/12.0/bin/amd64/nvcc...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/VC/BIN/amd64/nvcc...not found Checking for program /cygdrive/c/WINDOWS/Microsoft.NET/Framework64/v4.0.30319/nvcc...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/VC/VCPackages/nvcc...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/Common7/IDE/nvcc...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/Common7/Tools/nvcc...not found Checking for program /cygdrive/c/Program Files (x86)/HTML Help Workshop/nvcc...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/Team Tools/Performance Tools/x64/nvcc...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/Team Tools/Performance Tools/nvcc...not found Checking for program /cygdrive/c/Program Files (x86)/Windows Kits/8.1/bin/x64/nvcc...not found Checking for program /cygdrive/c/Program Files (x86)/Windows Kits/8.1/bin/x86/nvcc...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft SDKs/Windows/v8.1A/bin/NETFX 4.5.1 Tools/x64/nvcc...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/mpi/intel64/bin/nvcc...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/debugger_2018/gdb/intel64/bin/nvcc...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/debugger_2018/libipt/intel64/lib/nvcc...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64/ipp/nvcc...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64_win/mkl/nvcc...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64_win/compiler/nvcc...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64/tbb/vc12/nvcc...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64/tbb/vc12/nvcc...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64_win/daal/nvcc...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64_win/tbb/vc_mt/nvcc...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/Advisor 2018/bin32/nvcc...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/VTune Amplifier 2018/bin64/nvcc...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/Inspector 2018/bin32/nvcc...not found Checking for program /cygdrive/c/Program Files (x86)/Common Files/Intel/Shared Libraries/redist/intel64_win/mpirt/nvcc...not found Checking for program /cygdrive/c/Program Files (x86)/Common Files/Intel/Shared Libraries/redist/ia32_win/mpirt/nvcc...not found Checking for program /cygdrive/c/Program Files (x86)/Common Files/Intel/Shared Libraries/redist/intel64_win/compiler/nvcc...not found Checking for program /cygdrive/c/Program Files (x86)/Common Files/Intel/Shared Libraries/redist/ia32_win/compiler/nvcc...not found Checking for program /cygdrive/c/Program Files (x86)/Common Files/Oracle/Java/javapath/nvcc...not found Checking for program /cygdrive/c/ProgramData/Oracle/Java/javapath/nvcc...not found Checking for program /cygdrive/c/Common/Oracle/InstantClient112x64/bin/nvcc...not found Checking for program /cygdrive/c/Common/Oracle/InstantClient112x86/bin/nvcc...not found Checking for program /cygdrive/c/Common/Oracle/InstantClient112x86/nvcc...not found Checking for program /cygdrive/c/Common/Oracle/InstantClient112x64/nvcc...not found Checking for program /cygdrive/c/WINDOWS/system32/nvcc...not found Checking for program /cygdrive/c/WINDOWS/nvcc...not found Checking for program /cygdrive/c/WINDOWS/System32/Wbem/nvcc...not found Checking for program /cygdrive/c/WINDOWS/System32/WindowsPowerShell/v1.0/nvcc...not found Checking for program /cygdrive/c/WINDOWS/System32/OpenSSH/nvcc...not found Checking for program /cygdrive/c/Program Files (x86)/BBWin/bin/nvcc...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft SQL Server/90/Tools/binn/nvcc...not found Checking for program /cygdrive/c/APPS/PE/bin/nvcc...not found Checking for program /cygdrive/c/Program Files (x86)/Java/jre6/bin/nvcc...not found Checking for program /cygdrive/c/APPS/PE/efclient/bin/nvcc...not found Checking for program /cygdrive/c/Program Files/TortoiseSVN/bin/nvcc...not found Checking for program /cygdrive/c/Program Files (x86)/Windows Kits/8.1/Windows Performance Toolkit/nvcc...not found Checking for program /cygdrive/c/Program Files/Microsoft SQL Server/110/Tools/Binn/nvcc...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft SDKs/TypeScript/1.0/nvcc...not found Checking for program /cygdrive/c/Program Files/Microsoft SQL Server/120/Tools/Binn/nvcc...not found Checking for program /cygdrive/c/Users/qlu/AppData/Local/Microsoft/WindowsApp/nvcc...not found Checking for program /cygdrive/c/Program Files/mpich2x64/lib"/nvcc...not found Checking for program /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/nvcc...not found Checking for program /Developer/NVIDIA/CUDA-6.5/bin/nvcc...not found Checking for program /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/nvcc...not found Checking for program /usr/local/cuda/bin/nvcc...not found Checking for program /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/nvcc...not found ================================================================================ TEST checkCUDAPreprocessor from config.setCompilers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/setCompilers.py:744) TESTING: checkCUDAPreprocessor from config.setCompilers(config/BuildSystem/config/setCompilers.py:744) Locate a functional CUDA preprocessor ================================================================================ TEST checkCxxCompiler from config.setCompilers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/setCompilers.py:844) TESTING: checkCxxCompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:844) Locate a functional Cxx compiler Checking for program /usr/bin/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/bin/intel64/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64/compiler/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64_win/compiler/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/Common7/IDE/CommonExtensions/Microsoft/TestWindow/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/MSBuild/12.0/bin/amd64/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/VC/BIN/amd64/win32fe...not found Checking for program /cygdrive/c/WINDOWS/Microsoft.NET/Framework64/v4.0.30319/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/VC/VCPackages/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/Common7/IDE/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/Common7/Tools/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/HTML Help Workshop/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/Team Tools/Performance Tools/x64/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/Team Tools/Performance Tools/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Windows Kits/8.1/bin/x64/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Windows Kits/8.1/bin/x86/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft SDKs/Windows/v8.1A/bin/NETFX 4.5.1 Tools/x64/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/mpi/intel64/bin/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/debugger_2018/gdb/intel64/bin/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/debugger_2018/libipt/intel64/lib/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64/ipp/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64_win/mkl/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64_win/compiler/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64/tbb/vc12/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64/tbb/vc12/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64_win/daal/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64_win/tbb/vc_mt/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/Advisor 2018/bin32/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/VTune Amplifier 2018/bin64/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/Inspector 2018/bin32/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Common Files/Intel/Shared Libraries/redist/intel64_win/mpirt/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Common Files/Intel/Shared Libraries/redist/ia32_win/mpirt/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Common Files/Intel/Shared Libraries/redist/intel64_win/compiler/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Common Files/Intel/Shared Libraries/redist/ia32_win/compiler/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Common Files/Oracle/Java/javapath/win32fe...not found Checking for program /cygdrive/c/ProgramData/Oracle/Java/javapath/win32fe...not found Checking for program /cygdrive/c/Common/Oracle/InstantClient112x64/bin/win32fe...not found Checking for program /cygdrive/c/Common/Oracle/InstantClient112x86/bin/win32fe...not found Checking for program /cygdrive/c/Common/Oracle/InstantClient112x86/win32fe...not found Checking for program /cygdrive/c/Common/Oracle/InstantClient112x64/win32fe...not found Checking for program /cygdrive/c/WINDOWS/system32/win32fe...not found Checking for program /cygdrive/c/WINDOWS/win32fe...not found Checking for program /cygdrive/c/WINDOWS/System32/Wbem/win32fe...not found Checking for program /cygdrive/c/WINDOWS/System32/WindowsPowerShell/v1.0/win32fe...not found Checking for program /cygdrive/c/WINDOWS/System32/OpenSSH/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/BBWin/bin/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft SQL Server/90/Tools/binn/win32fe...not found Checking for program /cygdrive/c/APPS/PE/bin/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Java/jre6/bin/win32fe...not found Checking for program /cygdrive/c/APPS/PE/efclient/bin/win32fe...not found Checking for program /cygdrive/c/Program Files/TortoiseSVN/bin/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Windows Kits/8.1/Windows Performance Toolkit/win32fe...not found Checking for program /cygdrive/c/Program Files/Microsoft SQL Server/110/Tools/Binn/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft SDKs/TypeScript/1.0/win32fe...not found Checking for program /cygdrive/c/Program Files/Microsoft SQL Server/120/Tools/Binn/win32fe...not found Checking for program /cygdrive/c/Users/qlu/AppData/Local/Microsoft/WindowsApp/win32fe...not found Checking for program /cygdrive/c/Program Files/mpich2x64/lib"/win32fe...not found Checking for program /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe...found Defined make macro "CXX" to "/cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl" Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.cc stdout: conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.cc stdout: conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.exe /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.cc stdout: conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.exe /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -lpetsc-ufod4vtr9mqHvKIQiVAm stdout: ipo: error #11018: Cannot open libpetsc-ufod4vtr9mqHvKIQiVAm.lib LINK : fatal error LNK1181: cannot open input file 'libpetsc-ufod4vtr9mqHvKIQiVAm.lib' Possible ERROR while running linker: exit code 157 stdout: ipo: error #11018: Cannot open libpetsc-ufod4vtr9mqHvKIQiVAm.lib LINK : fatal error LNK1181: cannot open input file 'libpetsc-ufod4vtr9mqHvKIQiVAm.lib'Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.cc stdout: conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.exe /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o Testing executable /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.exe to see if it can be run Executing: /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.exe Executing: /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.exe Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl --version stdout: Win32 Development Tool Front End, version 1.11.3 Mon, Feb 27, 2017 11:10:38 AM Intel(R) C++ Intel(R) 64 Compiler for applications running on Intel(R) 64, Version 18.0.5.274 Build 20180823 ================================================================================ TEST checkCxxPreprocessor from config.setCompilers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/setCompilers.py:886) TESTING: checkCxxPreprocessor from config.setCompilers(config/BuildSystem/config/setCompilers.py:886) Locate a functional Cxx preprocessor Checking for program /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe...found Defined make macro "CXXPP" to "/cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E" Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.cc Preprocess stderr before filtering:: Preprocess stderr after filtering:: ================================================================================ TEST checkFortranCompiler from config.setCompilers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/setCompilers.py:989) TESTING: checkFortranCompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:989) Locate a functional Fortran compiler Checking for program /usr/bin/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/bin/intel64/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64/compiler/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64_win/compiler/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/Common7/IDE/CommonExtensions/Microsoft/TestWindow/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/MSBuild/12.0/bin/amd64/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/VC/BIN/amd64/win32fe...not found Checking for program /cygdrive/c/WINDOWS/Microsoft.NET/Framework64/v4.0.30319/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/VC/VCPackages/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/Common7/IDE/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/Common7/Tools/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/HTML Help Workshop/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/Team Tools/Performance Tools/x64/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/Team Tools/Performance Tools/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Windows Kits/8.1/bin/x64/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Windows Kits/8.1/bin/x86/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft SDKs/Windows/v8.1A/bin/NETFX 4.5.1 Tools/x64/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/mpi/intel64/bin/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/debugger_2018/gdb/intel64/bin/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/debugger_2018/libipt/intel64/lib/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64/ipp/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64_win/mkl/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64_win/compiler/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64/tbb/vc12/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64/tbb/vc12/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64_win/daal/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64_win/tbb/vc_mt/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/Advisor 2018/bin32/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/VTune Amplifier 2018/bin64/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/Inspector 2018/bin32/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Common Files/Intel/Shared Libraries/redist/intel64_win/mpirt/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Common Files/Intel/Shared Libraries/redist/ia32_win/mpirt/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Common Files/Intel/Shared Libraries/redist/intel64_win/compiler/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Common Files/Intel/Shared Libraries/redist/ia32_win/compiler/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Common Files/Oracle/Java/javapath/win32fe...not found Checking for program /cygdrive/c/ProgramData/Oracle/Java/javapath/win32fe...not found Checking for program /cygdrive/c/Common/Oracle/InstantClient112x64/bin/win32fe...not found Checking for program /cygdrive/c/Common/Oracle/InstantClient112x86/bin/win32fe...not found Checking for program /cygdrive/c/Common/Oracle/InstantClient112x86/win32fe...not found Checking for program /cygdrive/c/Common/Oracle/InstantClient112x64/win32fe...not found Checking for program /cygdrive/c/WINDOWS/system32/win32fe...not found Checking for program /cygdrive/c/WINDOWS/win32fe...not found Checking for program /cygdrive/c/WINDOWS/System32/Wbem/win32fe...not found Checking for program /cygdrive/c/WINDOWS/System32/WindowsPowerShell/v1.0/win32fe...not found Checking for program /cygdrive/c/WINDOWS/System32/OpenSSH/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/BBWin/bin/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft SQL Server/90/Tools/binn/win32fe...not found Checking for program /cygdrive/c/APPS/PE/bin/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Java/jre6/bin/win32fe...not found Checking for program /cygdrive/c/APPS/PE/efclient/bin/win32fe...not found Checking for program /cygdrive/c/Program Files/TortoiseSVN/bin/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Windows Kits/8.1/Windows Performance Toolkit/win32fe...not found Checking for program /cygdrive/c/Program Files/Microsoft SQL Server/110/Tools/Binn/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft SDKs/TypeScript/1.0/win32fe...not found Checking for program /cygdrive/c/Program Files/Microsoft SQL Server/120/Tools/Binn/win32fe...not found Checking for program /cygdrive/c/Users/qlu/AppData/Local/Microsoft/WindowsApp/win32fe...not found Checking for program /cygdrive/c/Program Files/mpich2x64/lib"/win32fe...not found Checking for program /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe...found Defined make macro "FC" to "/cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe ifort" Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe ifort -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.F90 Successful compile: Source: program main end Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe ifort -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.F90 Successful compile: Source: program main end Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe ifort -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.exe /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe ifort -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.F90 Successful compile: Source: program main end Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe ifort -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.exe /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -lpetsc-ufod4vtr9mqHvKIQiVAm stdout: ipo: error #11018: Cannot open libpetsc-ufod4vtr9mqHvKIQiVAm.lib LINK : fatal error LNK1181: cannot open input file 'libpetsc-ufod4vtr9mqHvKIQiVAm.lib' Possible ERROR while running linker: exit code 157 stdout: ipo: error #11018: Cannot open libpetsc-ufod4vtr9mqHvKIQiVAm.lib LINK : fatal error LNK1181: cannot open input file 'libpetsc-ufod4vtr9mqHvKIQiVAm.lib'Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe ifort -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.F90 Successful compile: Source: program main end Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe ifort -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.exe /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o Testing executable /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.exe to see if it can be run Executing: /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.exe Executing: /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.exe Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe ifort --version stdout: Win32 Development Tool Front End, version 1.11.3 Mon, Feb 27, 2017 11:10:38 AM Intel(R) Visual Fortran Intel(R) 64 Compiler for applications running on Intel(R) 64, Version 18.0.5.274 Build 20180823 ================================================================================ TEST checkFortranPreprocessor from config.setCompilers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/setCompilers.py:1026) TESTING: checkFortranPreprocessor from config.setCompilers(config/BuildSystem/config/setCompilers.py:1026) Locate a functional Fortran preprocessor Checking for program /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe...found Defined make macro "FPP" to "/cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe ifort -E" Deleting "FPP" Checking for program /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe...found Defined make macro "FPP" to "/cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe ifort --use cpp32" Deleting "FPP" ================================================================================ TEST checkFortranComments from config.setCompilers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/setCompilers.py:1049) TESTING: checkFortranComments from config.setCompilers(config/BuildSystem/config/setCompilers.py:1049) Make sure fortran comment "!" works Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe ifort -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.F90 Successful compile: Source: program main ! comment end Fortran comments can use ! in column 1 ================================================================================ TEST checkLargeFileIO from config.setCompilers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/setCompilers.py:1180) TESTING: checkLargeFileIO from config.setCompilers(config/BuildSystem/config/setCompilers.py:1180) ================================================================================ TEST checkArchiver from config.setCompilers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/setCompilers.py:1279) TESTING: checkArchiver from config.setCompilers(config/BuildSystem/config/setCompilers.py:1279) Check that the archiver exists and can make a library usable by the compiler Executing: ar -V stdout: GNU ar (GNU Binutils) 2.34.0.20200307 Copyright (C) 2020 Free Software Foundation, Inc. This program is free software; you may redistribute it under the terms of the GNU General Public License version 3 or (at your option) any later version. This program has absolutely no warranty. Executing: ar -V stdout: GNU ar (GNU Binutils) 2.34.0.20200307 Copyright (C) 2020 Free Software Foundation, Inc. This program is free software; you may redistribute it under the terms of the GNU General Public License version 3 or (at your option) any later version. This program has absolutely no warranty. Defined make macro "FAST_AR_FLAGS" to "Scq" Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int foo(int a) { return a+1; } Checking for program /usr/bin/ar...found Defined make macro "AR" to "/usr/bin/ar" Checking for program /usr/bin/ranlib...found Defined make macro "RANLIB" to "/usr/bin/ranlib -c" Executing: /usr/bin/ar cr /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/libconf1.a /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conf1.o Executing: /usr/bin/ranlib -c /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/libconf1.a Possible ERROR while running ranlib: stderr: /usr/bin/ranlib: invalid option -- c Ranlib is not functional with your archiver. Try --with-ranlib=true if ranlib is unnecessary. Executing: ar -V stdout: GNU ar (GNU Binutils) 2.34.0.20200307 Copyright (C) 2020 Free Software Foundation, Inc. This program is free software; you may redistribute it under the terms of the GNU General Public License version 3 or (at your option) any later version. This program has absolutely no warranty. Executing: ar -V stdout: GNU ar (GNU Binutils) 2.34.0.20200307 Copyright (C) 2020 Free Software Foundation, Inc. This program is free software; you may redistribute it under the terms of the GNU General Public License version 3 or (at your option) any later version. This program has absolutely no warranty. Defined make macro "FAST_AR_FLAGS" to "Scq" Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int foo(int a) { return a+1; } Checking for program /usr/bin/ar...found Defined make macro "AR" to "/usr/bin/ar" Checking for program /usr/bin/ranlib...found Defined make macro "RANLIB" to "/usr/bin/ranlib" Executing: /usr/bin/ar cr /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/libconf1.a /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conf1.o Executing: /usr/bin/ranlib /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/libconf1.a Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" extern int foo(int); int main() { int b = foo(1); if (b); ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.exe /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -L/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -lconf1 stdout: ipo: error #11018: Cannot open libconf1.lib LINK : fatal error LNK1181: cannot open input file 'libconf1.lib' Possible ERROR while running linker: exit code 157 stdout: ipo: error #11018: Cannot open libconf1.lib LINK : fatal error LNK1181: cannot open input file 'libconf1.lib'Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" extern int foo(int); int main() { int b = foo(1); if (b); ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.exe /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -L/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -lconf1 Defined make macro "AR_FLAGS" to "cr" Defined make macro "AR_LIB_SUFFIX" to "lib" ================================================================================ TEST checkSharedLinker from config.setCompilers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/setCompilers.py:1393) TESTING: checkSharedLinker from config.setCompilers(config/BuildSystem/config/setCompilers.py:1393) Check that the linker can produce shared libraries Checking shared linker /usr/bin/ar using flags [] Checking for program /usr/bin/ar...found Defined make macro "LD_SHARED" to "/usr/bin/ar" Trying C compiler flag Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int (*fprintf_ptr)(FILE*,const char*,...) = fprintf; void foo(void){ fprintf_ptr(stdout,"hello"); return; } void bar(void){foo();} Executing: /usr/bin/ar cr /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/libconftest.lib /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o ; /usr/bin/ranlib /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/libconftest.lib Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int foo(void); int main() { int ret = foo(); if (ret) {} ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.exe /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -L/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -lconftest Using shared linker /usr/bin/ar with flags [] and library extension lib Executing: uname -s stdout: CYGWIN_NT-10.0 Executing: uname -s stdout: CYGWIN_NT-10.0 ================================================================================ TEST checkLinkerWindows from config.setCompilers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/setCompilers.py:1487) TESTING: checkLinkerWindows from config.setCompilers(config/BuildSystem/config/setCompilers.py:1487) Turns off linker warning about unknown .o files extension Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.exe -Qwd10161 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o Valid C linker flag -Qwd10161 Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.cc stdout: conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.exe -Qwd10161 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o Valid Cxx linker flag -Qwd10161 ================================================================================ TEST checkPIC from config.setCompilers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/setCompilers.py:1127) TESTING: checkPIC from config.setCompilers(config/BuildSystem/config/setCompilers.py:1127) Determine the PIC option for each compiler Skip checking PIC options on user request ================================================================================ TEST checkSharedLinkerPaths from config.setCompilers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/setCompilers.py:1505) TESTING: checkSharedLinkerPaths from config.setCompilers(config/BuildSystem/config/setCompilers.py:1505) Determine the shared linker path options - IRIX: -rpath - Linux, OSF: -Wl,-rpath, - Solaris: -R - FreeBSD: -Wl,-R, Executing: uname -s stdout: CYGWIN_NT-10.0 Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -V stdout: icl: command line error: no files specified; for help type "icl /help" Trying C linker flag -Wl,-rpath, Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.exe -Wl,-rpath,/cygdrive/c/cygwin_cache/petsc-3.12.4 -Qwd10161 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o stdout: icl: command line warning #10157: ignoring option '/W'; argument is of wrong type Rejecting C linker flag -Wl,-rpath,/cygdrive/c/cygwin_cache/petsc-3.12.4 due to icl: command line warning #10157: ignoring option '/W'; argument is of wrong type Rejected C linker flag -Wl,-rpath, Trying C linker flag -R Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.exe -R/cygdrive/c/cygwin_cache/petsc-3.12.4 -Qwd10161 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o stdout: icl: command line warning #10006: ignoring unknown option '/R/cygdrive/c/cygwin_cache/petsc-3.12.4' Rejecting C linker flag -R/cygdrive/c/cygwin_cache/petsc-3.12.4 due to icl: command line warning #10006: ignoring unknown option '/R/cygdrive/c/cygwin_cache/petsc-3.12.4' Rejected C linker flag -R Trying C linker flag -rpath Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.exe -rpath /cygdrive/c/cygwin_cache/petsc-3.12.4 -Qwd10161 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o stdout: icl: command line warning #10006: ignoring unknown option '/rpath' ipo: error #11018: Cannot open C:\CYGWIN~1\petsc-3.12.4 LINK : fatal error LNK1104: cannot open file 'C:\CYGWIN~1\petsc-3.12.4' Possible ERROR while running linker: exit code 80 stdout: icl: command line warning #10006: ignoring unknown option '/rpath' ipo: error #11018: Cannot open C:\CYGWIN~1\petsc-3.12.4 LINK : fatal error LNK1104: cannot open file 'C:\CYGWIN~1\petsc-3.12.4' Rejecting linker flag -rpath /cygdrive/c/cygwin_cache/petsc-3.12.4 due to nonzero status from link Rejecting C linker flag -rpath /cygdrive/c/cygwin_cache/petsc-3.12.4 due to icl: command line warning #10006: ignoring unknown option '/rpath' ipo: error #11018: Cannot open C:\CYGWIN~1\petsc-3.12.4 LINK : fatal error LNK1104: cannot open file 'C:\CYGWIN~1\petsc-3.12.4' Rejected C linker flag -rpath Trying C linker flag -Wl,-R, Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.exe -Wl,-R,/cygdrive/c/cygwin_cache/petsc-3.12.4 -Qwd10161 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o stdout: icl: command line warning #10157: ignoring option '/W'; argument is of wrong type Rejecting C linker flag -Wl,-R,/cygdrive/c/cygwin_cache/petsc-3.12.4 due to icl: command line warning #10157: ignoring option '/W'; argument is of wrong type Rejected C linker flag -Wl,-R, Executing: uname -s stdout: CYGWIN_NT-10.0 Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -V stdout: icl: command line error: no files specified; for help type "icl /help" Trying Cxx linker flag -Wl,-rpath, Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.cc stdout: conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.exe -Wl,-rpath,/cygdrive/c/cygwin_cache/petsc-3.12.4 -Qwd10161 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o stdout: icl: command line warning #10157: ignoring option '/W'; argument is of wrong type Rejecting Cxx linker flag -Wl,-rpath,/cygdrive/c/cygwin_cache/petsc-3.12.4 due to icl: command line warning #10157: ignoring option '/W'; argument is of wrong type Rejected Cxx linker flag -Wl,-rpath, Trying Cxx linker flag -R Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.cc stdout: conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.exe -R/cygdrive/c/cygwin_cache/petsc-3.12.4 -Qwd10161 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o stdout: icl: command line warning #10006: ignoring unknown option '/R/cygdrive/c/cygwin_cache/petsc-3.12.4' Rejecting Cxx linker flag -R/cygdrive/c/cygwin_cache/petsc-3.12.4 due to icl: command line warning #10006: ignoring unknown option '/R/cygdrive/c/cygwin_cache/petsc-3.12.4' Rejected Cxx linker flag -R Trying Cxx linker flag -rpath Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.cc stdout: conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.exe -rpath /cygdrive/c/cygwin_cache/petsc-3.12.4 -Qwd10161 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o stdout: icl: command line warning #10006: ignoring unknown option '/rpath' ipo: error #11018: Cannot open C:\CYGWIN~1\petsc-3.12.4 LINK : fatal error LNK1104: cannot open file 'C:\CYGWIN~1\petsc-3.12.4' Possible ERROR while running linker: exit code 80 stdout: icl: command line warning #10006: ignoring unknown option '/rpath' ipo: error #11018: Cannot open C:\CYGWIN~1\petsc-3.12.4 LINK : fatal error LNK1104: cannot open file 'C:\CYGWIN~1\petsc-3.12.4' Rejecting linker flag -rpath /cygdrive/c/cygwin_cache/petsc-3.12.4 due to nonzero status from link Rejecting Cxx linker flag -rpath /cygdrive/c/cygwin_cache/petsc-3.12.4 due to icl: command line warning #10006: ignoring unknown option '/rpath' ipo: error #11018: Cannot open C:\CYGWIN~1\petsc-3.12.4 LINK : fatal error LNK1104: cannot open file 'C:\CYGWIN~1\petsc-3.12.4' Rejected Cxx linker flag -rpath Trying Cxx linker flag -Wl,-R, Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.cc stdout: conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.exe -Wl,-R,/cygdrive/c/cygwin_cache/petsc-3.12.4 -Qwd10161 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o stdout: icl: command line warning #10157: ignoring option '/W'; argument is of wrong type Rejecting Cxx linker flag -Wl,-R,/cygdrive/c/cygwin_cache/petsc-3.12.4 due to icl: command line warning #10157: ignoring option '/W'; argument is of wrong type Rejected Cxx linker flag -Wl,-R, Executing: uname -s stdout: CYGWIN_NT-10.0 Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -V stdout: icl: command line error: no files specified; for help type "icl /help" Trying FC linker flag -Wl,-rpath, Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe ifort -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.F90 Successful compile: Source: program main end Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe ifort -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.exe -Wl,-rpath,/cygdrive/c/cygwin_cache/petsc-3.12.4 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o stdout: ifort: command line warning #10157: ignoring option '/W'; argument is of wrong type Rejecting FC linker flag -Wl,-rpath,/cygdrive/c/cygwin_cache/petsc-3.12.4 due to ifort: command line warning #10157: ignoring option '/W'; argument is of wrong type Rejected FC linker flag -Wl,-rpath, Trying FC linker flag -R Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe ifort -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.F90 Successful compile: Source: program main end Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe ifort -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.exe -R/cygdrive/c/cygwin_cache/petsc-3.12.4 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o stdout: ifort: command line warning #10006: ignoring unknown option '/R/cygdrive/c/cygwin_cache/petsc-3.12.4' Rejecting FC linker flag -R/cygdrive/c/cygwin_cache/petsc-3.12.4 due to ifort: command line warning #10006: ignoring unknown option '/R/cygdrive/c/cygwin_cache/petsc-3.12.4' Rejected FC linker flag -R Trying FC linker flag -rpath Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe ifort -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.F90 Successful compile: Source: program main end Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe ifort -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.exe -rpath /cygdrive/c/cygwin_cache/petsc-3.12.4 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o stdout: ifort: command line warning #10006: ignoring unknown option '/rpath' ifort: command line warning #10161: unrecognized source type 'C:\CYGWIN~1\petsc-3.12.4'; object file assumed ipo: error #11018: Cannot open C:\CYGWIN~1\petsc-3.12.4 LINK : fatal error LNK1104: cannot open file 'C:\CYGWIN~1\petsc-3.12.4' Possible ERROR while running linker: exit code 80 stdout: ifort: command line warning #10006: ignoring unknown option '/rpath' ifort: command line warning #10161: unrecognized source type 'C:\CYGWIN~1\petsc-3.12.4'; object file assumed ipo: error #11018: Cannot open C:\CYGWIN~1\petsc-3.12.4 LINK : fatal error LNK1104: cannot open file 'C:\CYGWIN~1\petsc-3.12.4' Rejecting linker flag -rpath /cygdrive/c/cygwin_cache/petsc-3.12.4 due to nonzero status from link Rejecting FC linker flag -rpath /cygdrive/c/cygwin_cache/petsc-3.12.4 due to ifort: command line warning #10006: ignoring unknown option '/rpath' ifort: command line warning #10161: unrecognized source type 'C:\CYGWIN~1\petsc-3.12.4'; object file assumed ipo: error #11018: Cannot open C:\CYGWIN~1\petsc-3.12.4 LINK : fatal error LNK1104: cannot open file 'C:\CYGWIN~1\petsc-3.12.4' Rejected FC linker flag -rpath Trying FC linker flag -Wl,-R, Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe ifort -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.F90 Successful compile: Source: program main end Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe ifort -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.exe -Wl,-R,/cygdrive/c/cygwin_cache/petsc-3.12.4 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o stdout: ifort: command line warning #10157: ignoring option '/W'; argument is of wrong type Rejecting FC linker flag -Wl,-R,/cygdrive/c/cygwin_cache/petsc-3.12.4 due to ifort: command line warning #10157: ignoring option '/W'; argument is of wrong type Rejected FC linker flag -Wl,-R, ================================================================================ TEST checkLibC from config.setCompilers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/setCompilers.py:1540) TESTING: checkLibC from config.setCompilers(config/BuildSystem/config/setCompilers.py:1540) Test whether we need to explicitly include libc in shared linking - Mac OSX requires an explicit reference to libc for shared linking ================================================================================ TEST checkDynamicLinker from config.setCompilers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/setCompilers.py:1586) TESTING: checkDynamicLinker from config.setCompilers(config/BuildSystem/config/setCompilers.py:1586) Check that the linker can dynamicaly load shared libraries Checking for header: dlfcn.h All intermediate test results are stored in /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.HEA\conftest.c(3): error #2379: cannot open source file "dlfcn.h" #include ^ #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\confdefs.h" #line 2 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conffix.h" #line 3 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:: Preprocess stderr after filtering:: Dynamic loading disabled since dlfcn.h was missing ================================================================================ TEST output from config.setCompilers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/setCompilers.py:1635) TESTING: output from config.setCompilers(config/BuildSystem/config/setCompilers.py:1635) Output module data as defines and substitutions Substituting "CC" with "/cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl" Substituting "CFLAGS" with "" Defined make macro "CC_LINKER_SLFLAG" to "-L" Substituting "CPP" with "/cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E" Substituting "CPPFLAGS" with "" Substituting "CXX" with "/cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl" Substituting "CXX_CXXFLAGS" with "" Substituting "CXXFLAGS" with "" Substituting "CXX_LINKER_SLFLAG" with "-L" Substituting "CXXPP" with "/cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E" Substituting "CXXPPFLAGS" with "" Substituting "FC" with "/cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe ifort" Substituting "FFLAGS" with "" Defined make macro "FC_LINKER_SLFLAG" to "-L" Substituting "LDFLAGS" with "" Substituting "LIBS" with "" Substituting "SHARED_LIBRARY_FLAG" with "" child config.setCompilers 112.073668 ================================================================================ TEST checkSharedDynamicPicOptions from PETSc.options.sharedLibraries(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/PETSc/options/sharedLibraries.py:36) TESTING: checkSharedDynamicPicOptions from PETSc.options.sharedLibraries(config/PETSc/options/sharedLibraries.py:36) ================================================================================ TEST configureSharedLibraries from PETSc.options.sharedLibraries(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/PETSc/options/sharedLibraries.py:52) TESTING: configureSharedLibraries from PETSc.options.sharedLibraries(config/PETSc/options/sharedLibraries.py:52) Checks whether shared libraries should be used, for which you must - Specify --with-shared-libraries - Have found a working shared linker Defines PETSC_USE_SHARED_LIBRARIES if they are used Defined make rule "shared_arch" with dependencies "" and code [] Defined make macro "BUILDSHAREDLIB" to "no" Shared libraries - disabled ================================================================================ TEST configureDynamicLibraries from PETSc.options.sharedLibraries(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/PETSc/options/sharedLibraries.py:94) TESTING: configureDynamicLibraries from PETSc.options.sharedLibraries(config/PETSc/options/sharedLibraries.py:94) Checks whether dynamic loading is available (with dlfcn.h and libdl) ================================================================================ TEST configureSerializedFunctions from PETSc.options.sharedLibraries(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/PETSc/options/sharedLibraries.py:100) TESTING: configureSerializedFunctions from PETSc.options.sharedLibraries(config/PETSc/options/sharedLibraries.py:100) Defines PETSC_SERIALIZE_FUNCTIONS if they are used Requires shared libraries child PETSc.options.sharedLibraries 0.009536 ================================================================================ TEST configureIndexSize from PETSc.options.indexTypes(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/PETSc/options/indexTypes.py:30) TESTING: configureIndexSize from PETSc.options.indexTypes(config/PETSc/options/indexTypes.py:30) Defined make macro "PETSC_INDEX_SIZE" to "32" child PETSc.options.indexTypes 0.003370 ================================================================================ TEST configureCompilerFlags from config.compilerFlags(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/compilerFlags.py:72) TESTING: configureCompilerFlags from config.compilerFlags(config/BuildSystem/config/compilerFlags.py:72) Get the default compiler flags Defined make macro "C_VERSION" to "Win32 Development Tool Front End, version 1.11.3 Mon, Feb 27, 2017 11:10:38 AM \nIntel(R) C++ Intel(R) 64 Compiler for applications running on Intel(R) 64, Version 18.0.5.274 Build 20180823" Defined make macro "MPICC_SHOW" to "Unavailable" Trying C compiler flag -MT Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -MT /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Added C compiler flag -MT Defined make macro "MPICC_SHOW" to "Unavailable" Trying C compiler flag -O3 Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Added C compiler flag -O3 Trying C compiler flag -QxW Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -MT -O3 -QxW /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.c stdout: icl: command line warning #10131: extension 'W' not supported ignored in option '/Qx' conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejecting compiler flag -QxW due to icl: command line warning #10131: extension 'W' not supported ignored in option '/Qx' conftest.c Rejected C compiler flag -QxW Defined make macro "Cxx_VERSION" to "Win32 Development Tool Front End, version 1.11.3 Mon, Feb 27, 2017 11:10:38 AM \nIntel(R) C++ Intel(R) 64 Compiler for applications running on Intel(R) 64, Version 18.0.5.274 Build 20180823" Defined make macro "MPICXX_SHOW" to "Unavailable" Trying Cxx compiler flag -MT Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -MT /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.cc stdout: conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Added Cxx compiler flag -MT Trying Cxx compiler flag -GR Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -MT -GR /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.cc stdout: conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Added Cxx compiler flag -GR Trying Cxx compiler flag -EHsc Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -MT -GR -EHsc /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.cc stdout: conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Added Cxx compiler flag -EHsc Defined make macro "MPICXX_SHOW" to "Unavailable" Trying Cxx compiler flag -O3 Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -MT -GR -EHsc -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.cc stdout: conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Added Cxx compiler flag -O3 Trying Cxx compiler flag -QxW Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -MT -GR -EHsc -O3 -QxW /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.cc stdout: icl: command line warning #10131: extension 'W' not supported ignored in option '/Qx' conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejecting compiler flag -QxW due to icl: command line warning #10131: extension 'W' not supported ignored in option '/Qx' conftest.cc Rejected Cxx compiler flag -QxW Defined make macro "FC_VERSION" to "Win32 Development Tool Front End, version 1.11.3 Mon, Feb 27, 2017 11:10:38 AM \nIntel(R) Visual Fortran Intel(R) 64 Compiler for applications running on Intel(R) 64, Version 18.0.5.274 Build 20180823" Defined make macro "MPIFC_SHOW" to "Unavailable" Trying FC compiler flag -MT Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe ifort -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -MT /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.F90 Successful compile: Source: program main end Added FC compiler flag -MT Defined make macro "MPIFC_SHOW" to "Unavailable" Trying FC compiler flag -O3 Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe ifort -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.F90 Successful compile: Source: program main end Added FC compiler flag -O3 Trying FC compiler flag -QxW Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe ifort -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -MT -O3 -QxW /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.F90 stdout: ifort: command line warning #10131: extension 'W' not supported ignored in option '/Qx' Successful compile: Source: program main end Rejecting compiler flag -QxW due to ifort: command line warning #10131: extension 'W' not supported ignored in option '/Qx' Rejected FC compiler flag -QxW child config.compilerFlags 30.078568 Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl --help | head -n 20 stdout: Win32 Development Tool Front End, version 1.11.3 Mon, Feb 27, 2017 11:10:38 AM Usage: win32fe -- - must be the first argument to win32fe : {cl,icl,df,f90,ifl,bcc32,lib,tlib} cl: Microsoft 32-bit C/C++ Optimizing Compiler icl: Intel C/C++ Optimizing Compiler df: Compaq Visual Fortran Optimizing Compiler f90: Compaq Visual Fortran90 Optimizing Compiler ifl: Intel Fortran Optimizing Compiler ifort: Intel Fortran Optimizing Compiler nvcc: NVIDIA CUDA Compiler Driver bcc32: Borland C++ for Win32 lib: Microsoft Library Manager tlib: Borland Library Manager : --help: Output this help message and help for ================================================================================ TEST checkRestrict from config.compilers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/compilers.py:138) TESTING: checkRestrict from config.compilers(config/BuildSystem/config/compilers.py:138) Check for the C/CXX restrict keyword Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -V stdout: icl: command line error: no files specified; for help type "icl /help" All intermediate test results are stored in /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { float * __restrict x;; return 0; } compilers: Set C restrict keyword to __restrict Defined "C_RESTRICT" to "__restrict" ================================================================================ TEST checkCFormatting from config.compilers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/compilers.py:391) TESTING: checkCFormatting from config.compilers(config/BuildSystem/config/compilers.py:391) Activate format string checking if using the GNU compilers ================================================================================ TEST checkCInline from config.compilers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/compilers.py:108) TESTING: checkCInline from config.compilers(config/BuildSystem/config/compilers.py:108) Check for C inline keyword Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.c stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.COM\conftest.c(3): warning #303: explicit type is missing ("int" assumed) static inline int foo(int a) {return a;} ^ C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.COM\conftest.c(3): error: expected a ";" static inline int foo(int a) {return a;} ^ C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.COM\conftest.c(8): warning #12: parsing restarts here after previous syntax error compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.COM\conftest.c (code 2) Possible ERROR while running compiler: exit code 2 stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.COM\conftest.c(3): warning #303: explicit type is missing ("int" assumed) static inline int foo(int a) {return a;} ^ C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.COM\conftest.c(3): error: expected a ";" static inline int foo(int a) {return a;} ^ C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.COM\conftest.c(8): warning #12: parsing restarts here after previous syntax error compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.COM\conftest.c (code 2)Source: #include "confdefs.h" #include "conffix.h" static inline int foo(int a) {return a;} int main() { foo(1);; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" static __inline int foo(int a) {return a;} int main() { foo(1);; return 0; } compilers: Set C Inline keyword to __inline Defined "C_INLINE" to "__inline" ================================================================================ TEST checkDynamicLoadFlag from config.compilers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/compilers.py:402) TESTING: checkDynamicLoadFlag from config.compilers(config/BuildSystem/config/compilers.py:402) Checks that dlopen() takes RTLD_XXX, and defines PETSC_HAVE_RTLD_XXX if it does ================================================================================ TEST checkCLibraries from config.compilers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/compilers.py:202) TESTING: checkCLibraries from config.compilers(config/BuildSystem/config/compilers.py:202) Determines the libraries needed to link with C compiled code Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include void asub(void) {char s[16];printf("testing %s",s);} Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe ifort -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.F90 Successful compile: Source: program main print*,'testing' stop end Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe ifort -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.exe -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/confc.o C libraries are not needed when using Fortran linker Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include void asub(void) {char s[16];printf("testing %s",s);} Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -MT -GR -EHsc -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.cc stdout: conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main(int argc,char **args) {return 0;} Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.exe -Qwd10161 -MT -GR -EHsc -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/confc.o C libraries are not needed when using C++ linker ================================================================================ TEST checkDependencyGenerationFlag from config.compilers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/compilers.py:1345) TESTING: checkDependencyGenerationFlag from config.compilers(config/BuildSystem/config/compilers.py:1345) Check if -MMD works for dependency generation, and add it if it does Trying C compiler flag -MMD -MP Rejected C compiler flag -MMD -MP Trying C compiler flag -MMD Rejected C compiler flag -MMD Trying C compiler flag -xMMD Rejected C compiler flag -xMMD Trying C compiler flag -qmakedep=gcc Rejected C compiler flag -qmakedep=gcc Trying C compiler flag -MD Rejected C compiler flag -MD because no dependency file (/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.d) was generated Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -MT -O3 -MMD -MP /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.c stdout: icl: command line warning #10006: ignoring unknown option '/MMD' conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejecting compiler flag -MMD -MP due to icl: command line warning #10006: ignoring unknown option '/MMD' conftest.c Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -MT -O3 -MMD /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.c stdout: icl: command line warning #10006: ignoring unknown option '/MMD' conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejecting compiler flag -MMD due to icl: command line warning #10006: ignoring unknown option '/MMD' conftest.c Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -MT -O3 -xMMD /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.c stdout: icl: command line warning #10006: ignoring unknown option '/xMMD' conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejecting compiler flag -xMMD due to icl: command line warning #10006: ignoring unknown option '/xMMD' conftest.c Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -MT -O3 -qmakedep=gcc /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.c stdout: icl: command line warning #10006: ignoring unknown option '/qmakedep=gcc' conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejecting compiler flag -qmakedep=gcc due to icl: command line warning #10006: ignoring unknown option '/qmakedep=gcc' conftest.c Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -MT -O3 -MD /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.c stdout: icl: command line warning #10121: overriding '/MT' with '/MD' conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Trying Cxx compiler flag -MMD -MP Rejected Cxx compiler flag -MMD -MP Trying Cxx compiler flag -MMD Rejected Cxx compiler flag -MMD Trying Cxx compiler flag -xMMD Rejected Cxx compiler flag -xMMD Trying Cxx compiler flag -qmakedep=gcc Rejected Cxx compiler flag -qmakedep=gcc Trying Cxx compiler flag -MD Rejected Cxx compiler flag -MD because no dependency file (/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.d) was generated Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -MT -GR -EHsc -O3 -MMD -MP /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.cc stdout: icl: command line warning #10006: ignoring unknown option '/MMD' conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejecting compiler flag -MMD -MP due to icl: command line warning #10006: ignoring unknown option '/MMD' conftest.cc Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -MT -GR -EHsc -O3 -MMD /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.cc stdout: icl: command line warning #10006: ignoring unknown option '/MMD' conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejecting compiler flag -MMD due to icl: command line warning #10006: ignoring unknown option '/MMD' conftest.cc Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -MT -GR -EHsc -O3 -xMMD /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.cc stdout: icl: command line warning #10006: ignoring unknown option '/xMMD' conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejecting compiler flag -xMMD due to icl: command line warning #10006: ignoring unknown option '/xMMD' conftest.cc Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -MT -GR -EHsc -O3 -qmakedep=gcc /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.cc stdout: icl: command line warning #10006: ignoring unknown option '/qmakedep=gcc' conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejecting compiler flag -qmakedep=gcc due to icl: command line warning #10006: ignoring unknown option '/qmakedep=gcc' conftest.cc Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -MT -GR -EHsc -O3 -MD /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.cc stdout: icl: command line warning #10121: overriding '/MT' with '/MD' conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } ================================================================================ TEST checkC99Flag from config.compilers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/compilers.py:1390) TESTING: checkC99Flag from config.compilers(config/BuildSystem/config/compilers.py:1390) Check for -std=c99 or equivalent flag Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { float x[2],y; y = FLT_ROUNDS; // c++ comment int j = 2; for (int i=0; i<2; i++){ x[i] = i*j*y; } ; return 0; } Accepted C99 compile flag: Defined "HAVE_C99" to "1" ================================================================================ TEST checkRestrict from config.compilers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/compilers.py:138) TESTING: checkRestrict from config.compilers(config/BuildSystem/config/compilers.py:138) Check for the C/CXX restrict keyword Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -V stdout: icl: command line error: no files specified; for help type "icl /help" Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -MT -GR -EHsc -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.cc stdout: conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { float * __restrict x;; return 0; } compilers: Set Cxx restrict keyword to __restrict Defined "CXX_RESTRICT" to "__restrict" ================================================================================ TEST checkCxxOptionalExtensions from config.compilers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/compilers.py:421) TESTING: checkCxxOptionalExtensions from config.compilers(config/BuildSystem/config/compilers.py:421) Check whether the C++ compiler (IBM xlC, OSF5) need special flag for .c files which contain C++ Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -MT -GR -EHsc -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.c stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.c(5): error: identifier "class" is undefined class somename { int i; };; ^ C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.c(5): error: expected a ";" class somename { int i; };; ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.c (code 2) Possible ERROR while running compiler: exit code 2 stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.c(5): error: identifier "class" is undefined class somename { int i; };; ^ C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.c(5): error: expected a ";" class somename { int i; };; ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.c (code 2)Source: #include "confdefs.h" #include "conffix.h" int main() { class somename { int i; };; return 0; } Rejecting compiler flag due to nonzero status from link Rejecting compiler flag due to conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.c(5): error: identifier "class" is undefined class somename { int i; };; ^ C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.c(5): error: expected a ";" class somename { int i; };; ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.c (code 2) PETSc Error: No output file produced Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -MT -GR -EHsc -O3 -+ /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.c stdout: icl: command line warning #10006: ignoring unknown option '/+' conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.c(5): error: identifier "class" is undefined class somename { int i; };; ^ C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.c(5): error: expected a ";" class somename { int i; };; ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.c (code 2) Possible ERROR while running compiler: exit code 2 stdout: icl: command line warning #10006: ignoring unknown option '/+' conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.c(5): error: identifier "class" is undefined class somename { int i; };; ^ C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.c(5): error: expected a ";" class somename { int i; };; ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.c (code 2)Source: #include "confdefs.h" #include "conffix.h" int main() { class somename { int i; };; return 0; } Rejecting compiler flag -+ due to nonzero status from link Rejecting compiler flag -+ due to icl: command line warning #10006: ignoring unknown option '/+' conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.c(5): error: identifier "class" is undefined class somename { int i; };; ^ C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.c(5): error: expected a ";" class somename { int i; };; ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.c (code 2) PETSc Error: No output file produced Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -MT -GR -EHsc -O3 -x cxx -tlocal /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.c stdout: Error: win32fe: Input File Not Found: C:\CYGWIN~1\PETSC-~1.4\cxx Possible ERROR while running compiler: exit code 127 stdout: Error: win32fe: Input File Not Found: C:\CYGWIN~1\PETSC-~1.4\cxxSource: #include "confdefs.h" #include "conffix.h" int main() { class somename { int i; };; return 0; } Rejecting compiler flag -x cxx -tlocal due to nonzero status from link Rejecting compiler flag -x cxx -tlocal due to Error: win32fe: Input File Not Found: C:\CYGWIN~1\PETSC-~1.4\cxx PETSc Error: No output file produced Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -MT -GR -EHsc -O3 -Kc++ /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.c stdout: icl: command line warning #10006: ignoring unknown option '/Kc++' conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.c(5): error: identifier "class" is undefined class somename { int i; };; ^ C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.c(5): error: expected a ";" class somename { int i; };; ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.c (code 2) Possible ERROR while running compiler: exit code 2 stdout: icl: command line warning #10006: ignoring unknown option '/Kc++' conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.c(5): error: identifier "class" is undefined class somename { int i; };; ^ C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.c(5): error: expected a ";" class somename { int i; };; ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.c (code 2)Source: #include "confdefs.h" #include "conffix.h" int main() { class somename { int i; };; return 0; } Rejecting compiler flag -Kc++ due to nonzero status from link Rejecting compiler flag -Kc++ due to icl: command line warning #10006: ignoring unknown option '/Kc++' conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.c(5): error: identifier "class" is undefined class somename { int i; };; ^ C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.c(5): error: expected a ";" class somename { int i; };; ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.c (code 2) PETSc Error: No output file produced Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -MT -GR -EHsc -O3 -x c++ /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.c stdout: Error: win32fe: Input File Not Found: C:\CYGWIN~1\PETSC-~1.4\c++ Possible ERROR while running compiler: exit code 127 stdout: Error: win32fe: Input File Not Found: C:\CYGWIN~1\PETSC-~1.4\c++Source: #include "confdefs.h" #include "conffix.h" int main() { class somename { int i; };; return 0; } Rejecting compiler flag -x c++ due to nonzero status from link Rejecting compiler flag -x c++ due to Error: win32fe: Input File Not Found: C:\CYGWIN~1\PETSC-~1.4\c++ PETSc Error: No output file produced Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -MT -GR -EHsc -O3 -TP /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { class somename { int i; };; return 0; } Added Cxx compiler flag -TP ================================================================================ TEST checkCxxInline from config.compilers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/compilers.py:123) TESTING: checkCxxInline from config.compilers(config/BuildSystem/config/compilers.py:123) Check for C++ inline keyword Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -MT -GR -EHsc -O3 -TP /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.cc stdout: conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" static inline int foo(int a) {return a;} int main() { foo(1);; return 0; } compilers: Set Cxx Inline keyword to inline Defined "CXX_INLINE" to "inline" ================================================================================ TEST checkCxxLibraries from config.compilers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/compilers.py:533) TESTING: checkCxxLibraries from config.compilers(config/BuildSystem/config/compilers.py:533) Determines the libraries needed to link with C++ from C and Fortran Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -MT -GR -EHsc -O3 -TP /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.cc stdout: conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include void asub(void) {std::vector v; try { throw 20; } catch (int e) { std::cout << "An exception occurred"; }} Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main(int argc,char **args) {return 0;} Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/confc.o C++ libraries are not needed when using C linker Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -MT -GR -EHsc -O3 -TP /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.cc stdout: conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include void asub(void) {std::vector v; try { throw 20; } catch (int e) { std::cout << "An exception occurred"; }} Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe ifort -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.F90 Successful compile: Source: program main print*,'testing' stop end Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe ifort -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.exe -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/confc.o C++ libraries are not needed when using FC linker ================================================================================ TEST checkCxxDialect from config.compilers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/compilers.py:449) TESTING: checkCxxDialect from config.compilers(config/BuildSystem/config/compilers.py:449) Determine the Cxx dialect supported by the compiler [and correspoding compiler option - if any]. -with-cxx-dialect can take options: auto: use highest dialect configure can determine cxx17: [future?] cxx14: gnu++14 or c++14 cxx11: gnu++11 or c++11 0: disable CxxDialect check and use compiler default checkCxxDialect: checking CXX14 with flag: Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -MT -GR -EHsc -O3 -TP /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.cc stdout: conftest.cc C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.cc(7): error: identifier "constexpr" is undefined template constexpr T Cubed( T x ) { return x*x*x; } ^ C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.cc(7): error: "T" is not a function or static data member template constexpr T Cubed( T x ) { return x*x*x; } ^ C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.cc(23): warning #12: parsing restarts here after previous syntax error C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.cc(23): error: expected a ";" compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.cc (code 2) Possible ERROR while running compiler: exit code 2 stdout: conftest.cc C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.cc(7): error: identifier "constexpr" is undefined template constexpr T Cubed( T x ) { return x*x*x; } ^ C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.cc(7): error: "T" is not a function or static data member template constexpr T Cubed( T x ) { return x*x*x; } ^ C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.cc(23): warning #12: parsing restarts here after previous syntax error C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.cc(23): error: expected a ";" compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.cc (code 2)Source: #include "confdefs.h" #include "conffix.h" #include #include #include template constexpr T Cubed( T x ) { return x*x*x; } int main() { std::random_device rd; std::mt19937 mt(rd()); std::normal_distribution dist(0,1); const double x = dist(mt); std::cout << x; constexpr std::complex I(0.0,1.0); auto lambda = [](auto x, auto y) {return x + y;}; return lambda(3,4); ; return 0; } Rejecting compiler flag due to nonzero status from link Rejecting compiler flag due to conftest.cc C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.cc(7): error: identifier "constexpr" is undefined template constexpr T Cubed( T x ) { return x*x*x; } ^ C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.cc(7): error: "T" is not a function or static data member template constexpr T Cubed( T x ) { return x*x*x; } ^ C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.cc(23): warning #12: parsing restarts here after previous syntax error C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.cc(23): error: expected a ";" compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.cc (code 2) PETSc Error: No output file produced checkCxxDialect: checking CXX14 with flag: -std=c++14 Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -MT -GR -EHsc -O3 -std=c++14 -TP /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.cc stdout: conftest.cc Command-line error: the version of Microsoft being emulated must be at least Microsoft* Visual Studio 2015 Update 3 to use "-std:c++14" compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.cc (code 4) Possible ERROR while running compiler: exit code 4 stdout: conftest.cc Command-line error: the version of Microsoft being emulated must be at least Microsoft* Visual Studio 2015 Update 3 to use "-std:c++14" compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.cc (code 4)Source: #include "confdefs.h" #include "conffix.h" #include #include #include template constexpr T Cubed( T x ) { return x*x*x; } int main() { std::random_device rd; std::mt19937 mt(rd()); std::normal_distribution dist(0,1); const double x = dist(mt); std::cout << x; constexpr std::complex I(0.0,1.0); auto lambda = [](auto x, auto y) {return x + y;}; return lambda(3,4); ; return 0; } Rejecting compiler flag -std=c++14 due to nonzero status from link Rejecting compiler flag -std=c++14 due to conftest.cc Command-line error: the version of Microsoft being emulated must be at least Microsoft* Visual Studio 2015 Update 3 to use "-std:c++14" compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.cc (code 4) PETSc Error: No output file produced checkCxxDialect: checking CXX11 with flag: Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -MT -GR -EHsc -O3 -TP /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.cc stdout: conftest.cc C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.cc(7): error: identifier "constexpr" is undefined template constexpr T Cubed( T x ) { return x*x*x; } ^ C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.cc(7): error: "T" is not a function or static data member template constexpr T Cubed( T x ) { return x*x*x; } ^ C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.cc(19): warning #12: parsing restarts here after previous syntax error C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.cc(19): error: expected a ";" compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.cc (code 2) Possible ERROR while running compiler: exit code 2 stdout: conftest.cc C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.cc(7): error: identifier "constexpr" is undefined template constexpr T Cubed( T x ) { return x*x*x; } ^ C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.cc(7): error: "T" is not a function or static data member template constexpr T Cubed( T x ) { return x*x*x; } ^ C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.cc(19): warning #12: parsing restarts here after previous syntax error C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.cc(19): error: expected a ";" compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.cc (code 2)Source: #include "confdefs.h" #include "conffix.h" #include #include #include template constexpr T Cubed( T x ) { return x*x*x; } int main() { std::random_device rd; std::mt19937 mt(rd()); std::normal_distribution dist(0,1); const double x = dist(mt); std::cout << x; ; return 0; } Rejecting compiler flag due to nonzero status from link Rejecting compiler flag due to conftest.cc C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.cc(7): error: identifier "constexpr" is undefined template constexpr T Cubed( T x ) { return x*x*x; } ^ C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.cc(7): error: "T" is not a function or static data member template constexpr T Cubed( T x ) { return x*x*x; } ^ C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.cc(19): warning #12: parsing restarts here after previous syntax error C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.cc(19): error: expected a ";" compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.cc (code 2) PETSc Error: No output file produced checkCxxDialect: checking CXX11 with flag: -std=c++11 Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -MT -GR -EHsc -O3 -std=c++11 -TP /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.cc stdout: icl: command line warning #10159: invalid argument for option '/std' conftest.cc C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.cc(7): error: identifier "constexpr" is undefined template constexpr T Cubed( T x ) { return x*x*x; } ^ C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.cc(7): error: "T" is not a function or static data member template constexpr T Cubed( T x ) { return x*x*x; } ^ C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.cc(19): warning #12: parsing restarts here after previous syntax error C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.cc(19): error: expected a ";" compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.cc (code 2) Possible ERROR while running compiler: exit code 2 stdout: icl: command line warning #10159: invalid argument for option '/std' conftest.cc C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.cc(7): error: identifier "constexpr" is undefined template constexpr T Cubed( T x ) { return x*x*x; } ^ C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.cc(7): error: "T" is not a function or static data member template constexpr T Cubed( T x ) { return x*x*x; } ^ C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.cc(19): warning #12: parsing restarts here after previous syntax error C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.cc(19): error: expected a ";" compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.cc (code 2)Source: #include "confdefs.h" #include "conffix.h" #include #include #include template constexpr T Cubed( T x ) { return x*x*x; } int main() { std::random_device rd; std::mt19937 mt(rd()); std::normal_distribution dist(0,1); const double x = dist(mt); std::cout << x; ; return 0; } Rejecting compiler flag -std=c++11 due to nonzero status from link Rejecting compiler flag -std=c++11 due to icl: command line warning #10159: invalid argument for option '/std' conftest.cc C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.cc(7): error: identifier "constexpr" is undefined template constexpr T Cubed( T x ) { return x*x*x; } ^ C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.cc(7): error: "T" is not a function or static data member template constexpr T Cubed( T x ) { return x*x*x; } ^ C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.cc(19): warning #12: parsing restarts here after previous syntax error C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.cc(19): error: expected a ";" compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.cc (code 2) PETSc Error: No output file produced checkCxxDialect: checking CXX11 with flag: -std=c++0x Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -MT -GR -EHsc -O3 -std=c++0x -TP /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.cc stdout: icl: command line warning #10159: invalid argument for option '/std' conftest.cc C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.cc(7): error: identifier "constexpr" is undefined template constexpr T Cubed( T x ) { return x*x*x; } ^ C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.cc(7): error: "T" is not a function or static data member template constexpr T Cubed( T x ) { return x*x*x; } ^ C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.cc(19): warning #12: parsing restarts here after previous syntax error C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.cc(19): error: expected a ";" compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.cc (code 2) Possible ERROR while running compiler: exit code 2 stdout: icl: command line warning #10159: invalid argument for option '/std' conftest.cc C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.cc(7): error: identifier "constexpr" is undefined template constexpr T Cubed( T x ) { return x*x*x; } ^ C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.cc(7): error: "T" is not a function or static data member template constexpr T Cubed( T x ) { return x*x*x; } ^ C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.cc(19): warning #12: parsing restarts here after previous syntax error C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.cc(19): error: expected a ";" compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.cc (code 2)Source: #include "confdefs.h" #include "conffix.h" #include #include #include template constexpr T Cubed( T x ) { return x*x*x; } int main() { std::random_device rd; std::mt19937 mt(rd()); std::normal_distribution dist(0,1); const double x = dist(mt); std::cout << x; ; return 0; } Rejecting compiler flag -std=c++0x due to nonzero status from link Rejecting compiler flag -std=c++0x due to icl: command line warning #10159: invalid argument for option '/std' conftest.cc C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.cc(7): error: identifier "constexpr" is undefined template constexpr T Cubed( T x ) { return x*x*x; } ^ C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.cc(7): error: "T" is not a function or static data member template constexpr T Cubed( T x ) { return x*x*x; } ^ C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.cc(19): warning #12: parsing restarts here after previous syntax error C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.cc(19): error: expected a ";" compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.SET\conftest.cc (code 2) PETSc Error: No output file produced Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -V stdout: icl: command line error: no files specified; for help type "icl /help" ================================================================================ TEST checkFortranNameMangling from config.compilers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/compilers.py:838) TESTING: checkFortranNameMangling from config.compilers(config/BuildSystem/config/compilers.py:838) Checks Fortran name mangling, and defines HAVE_FORTRAN_UNDERSCORE, HAVE_FORTRAN_NOUNDERSCORE, HAVE_FORTRAN_CAPS, or HAVE_FORTRAN_STDCALL Testing Fortran mangling type underscore with code void d1chk_(void){return;} Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" void d1chk_(void){return;} Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe ifort -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.F90 Successful compile: Source: program main call d1chk() end Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe ifort -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.exe -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/confc.o stdout: conftest.obj : error LNK2019: unresolved external symbol D1CHK referenced in function MAIN__ C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.COM\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: exit code 96 stdout: conftest.obj : error LNK2019: unresolved external symbol D1CHK referenced in function MAIN__ C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.COM\conftest.exe : fatal error LNK1120: 1 unresolved externalsTesting Fortran mangling type unchanged with code void d1chk(void){return;} Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" void d1chk(void){return;} Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe ifort -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.F90 Successful compile: Source: program main call d1chk() end Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe ifort -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.exe -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/confc.o stdout: conftest.obj : error LNK2019: unresolved external symbol D1CHK referenced in function MAIN__ C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.COM\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: exit code 96 stdout: conftest.obj : error LNK2019: unresolved external symbol D1CHK referenced in function MAIN__ C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.COM\conftest.exe : fatal error LNK1120: 1 unresolved externalsTesting Fortran mangling type caps with code void D1CHK(void){return;} Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" void D1CHK(void){return;} Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe ifort -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.F90 Successful compile: Source: program main call d1chk() end Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe ifort -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.exe -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/confc.o compilers: Fortran name mangling is caps Defined "HAVE_FORTRAN_CAPS" to "1" Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe ifort --version stdout: Win32 Development Tool Front End, version 1.11.3 Mon, Feb 27, 2017 11:10:38 AM Intel(R) Visual Fortran Intel(R) 64 Compiler for applications running on Intel(R) 64, Version 18.0.5.274 Build 20180823 Defined "FORTRAN_CHARLEN_T" to "int" ================================================================================ TEST checkFortranNameManglingDouble from config.compilers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/compilers.py:879) TESTING: checkFortranNameManglingDouble from config.compilers(config/BuildSystem/config/compilers.py:879) Checks if symbols containing an underscore append an extra underscore, and defines HAVE_FORTRAN_UNDERSCORE_UNDERSCORE if necessary Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" void d1_chk__(void){return;} Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe ifort -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.F90 Successful compile: Source: program main call d1_chk() end Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe ifort -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.exe -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/confc.o stdout: conftest.obj : error LNK2019: unresolved external symbol D1_CHK referenced in function MAIN__ C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.COM\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: exit code 96 stdout: conftest.obj : error LNK2019: unresolved external symbol D1_CHK referenced in function MAIN__ C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.COM\conftest.exe : fatal error LNK1120: 1 unresolved externals================================================================================ TEST checkFortranLibraries from config.compilers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/compilers.py:889) TESTING: checkFortranLibraries from config.compilers(config/BuildSystem/config/compilers.py:889) Substitutes for FLIBS the libraries needed to link with Fortran This macro is intended to be used in those situations when it is necessary to mix, e.g. C++ and Fortran 77, source code into a single program or shared library. For example, if object files from a C++ and Fortran 77 compiler must be linked together, then the C++ compiler/linker must be used for linking (since special C++-ish things need to happen at link time like calling global constructors, instantiating templates, enabling exception support, etc.). However, the Fortran 77 intrinsic and run-time libraries must be linked in as well, but the C++ compiler/linker does not know how to add these Fortran 77 libraries. This code was translated from the autoconf macro which was packaged in its current form by Matthew D. Langston . However, nearly all of this macro came from the OCTAVE_FLIBS macro in octave-2.0.13/aclocal.m4, and full credit should go to John W. Eaton for writing this extremely useful macro. Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe ifort -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.F90 stdout: C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.COM\conftest.F90(2): warning #5117: Bad # preprocessor line #include -^ Successful compile: Source: program main #include call MPI_Allreduce() end Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe ifort -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.exe -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.o stdout: conftest.obj : error LNK2019: unresolved external symbol MPI_ALLREDUCE referenced in function MAIN__ C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.COM\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: exit code 96 stdout: conftest.obj : error LNK2019: unresolved external symbol MPI_ALLREDUCE referenced in function MAIN__ C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.COM\conftest.exe : fatal error LNK1120: 1 unresolved externalsExecuting: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe ifort -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.F90 Successful compile: Source: subroutine asub() print*,'testing' return end Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main(int argc,char **args) {return 0;} Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/confc.o Fortran libraries are not needed when using C linker Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe ifort -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.F90 Successful compile: Source: subroutine asub() print*,'testing' return end Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -MT -GR -EHsc -O3 -TP /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.cc stdout: conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main(int argc,char **args) {return 0;} Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.exe -Qwd10161 -MT -GR -EHsc -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/confc.o Fortran libraries are not needed when using C++ linker ================================================================================ TEST checkFortranLinkingCxx from config.compilers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/compilers.py:1310) TESTING: checkFortranLinkingCxx from config.compilers(config/BuildSystem/config/compilers.py:1310) Check that Fortran can link C++ libraries Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -MT -GR -EHsc -O3 -TP /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.cc stdout: conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" extern "C" void D1CHK(void); void foo(void){D1CHK();} Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -MT -GR -EHsc -O3 -TP /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.cc stdout: conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" extern "C" void D1CHK(void); void D1CHK(void){return;} Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe ifort -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.F90 Successful compile: Source: program main call d1chk() end Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe ifort -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.exe -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/conftest.o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/cxxobj.o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers/confc.o compilers: Fortran can link C++ functions ================================================================================ TEST setupFrameworkCompilers from config.compilers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/compilers.py:1455) TESTING: setupFrameworkCompilers from config.compilers(config/BuildSystem/config/compilers.py:1455) child config.compilers 110.679868 ================================================================================ TEST configureClosure from config.utilities.closure(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/utilities/closure.py:17) TESTING: configureClosure from config.utilities.closure(config/BuildSystem/config/utilities/closure.py:17) Determine if Apple ^close syntax is supported in C All intermediate test results are stored in /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure/conftest.c stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.CLO\conftest.c(6): error: expected an identifier int (^closure)(int);; ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.CLO\conftest.c (code 2) Possible ERROR while running compiler: exit code 2 stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.CLO\conftest.c(6): error: expected an identifier int (^closure)(int);; ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.CLO\conftest.c (code 2)Source: #include "confdefs.h" #include "conffix.h" #include int main() { int (^closure)(int);; return 0; } Compile failed inside link child config.utilities.closure 1.822144 ================================================================================ TEST checkFortranTypeSizes from config.compilersFortran(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/compilersFortran.py:56) TESTING: checkFortranTypeSizes from config.compilersFortran(config/BuildSystem/config/compilersFortran.py:56) Check whether real*8 is supported and suggest flags which will allow support All intermediate test results are stored in /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilersFortran Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe ifort -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilersFortran/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilersFortran -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilersFortran/conftest.F90 Successful compile: Source: program main real*8 variable end ================================================================================ TEST checkFortranPreprocessor from config.compilersFortran(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/compilersFortran.py:73) TESTING: checkFortranPreprocessor from config.compilersFortran(config/BuildSystem/config/compilersFortran.py:73) Determine if Fortran handles preprocessing properly Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe ifort -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilersFortran -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -MT -O3 -fpp /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.F90 Successful compile: Source: program main #define dummy dummy #ifndef dummy fooey #endif end Added FC compiler flag -fpp compilers: Fortran uses -fpp preprocessor ================================================================================ TEST checkFortranDefineCompilerOption from config.compilersFortran(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/compilersFortran.py:96) TESTING: checkFortranDefineCompilerOption from config.compilersFortran(config/BuildSystem/config/compilersFortran.py:96) Check if -WF,-Dfoobar or -Dfoobar is the compiler option to define a macro Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe ifort -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilersFortran -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -MT -O3 -fpp -DTesting /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.F90 Successful compile: Source: program main #define dummy dummy #ifndef Testing fooey #endif end Defined make macro "FC_DEFINE_FLAG" to "-D" compilers: Fortran uses -D for defining macro ================================================================================ TEST checkFortran90 from config.compilersFortran(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/compilersFortran.py:146) TESTING: checkFortran90 from config.compilersFortran(config/BuildSystem/config/compilersFortran.py:146) Determine whether the Fortran compiler handles F90 Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe ifort -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilersFortran/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilersFortran -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -MT -O3 -fpp /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilersFortran/conftest.F90 Successful compile: Source: program main INTEGER, PARAMETER :: int = SELECTED_INT_KIND(8) INTEGER (KIND=int) :: ierr ierr = 1 end Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe ifort -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilersFortran/conftest.exe -MT -O3 -fpp /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilersFortran/conftest.o Defined "USING_F90" to "1" Fortran compiler supports F90 ================================================================================ TEST checkFortran90FreeForm from config.compilersFortran(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/compilersFortran.py:159) TESTING: checkFortran90FreeForm from config.compilersFortran(config/BuildSystem/config/compilersFortran.py:159) Determine whether the Fortran compiler handles F90FreeForm We also require that the compiler handles lines longer than 132 characters Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe ifort -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilersFortran/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilersFortran -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -MT -O3 -fpp /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilersFortran/conftest.F90 Successful compile: Source: program main INTEGER, PARAMETER :: int = SELECTED_INT_KIND(8); INTEGER (KIND=int) :: ierr; ierr = 1 end Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe ifort -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilersFortran/conftest.exe -MT -O3 -fpp /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilersFortran/conftest.o Defined "USING_F90FREEFORM" to "1" Fortran compiler supports F90FreeForm ================================================================================ TEST checkFortran2003 from config.compilersFortran(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/compilersFortran.py:173) TESTING: checkFortran2003 from config.compilersFortran(config/BuildSystem/config/compilersFortran.py:173) Determine whether the Fortran compiler handles F2003 Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe ifort -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilersFortran/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilersFortran -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -MT -O3 -fpp /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilersFortran/conftest.F90 Successful compile: Source: module Base_module type, public :: base_type integer :: A contains procedure, public :: Print => BasePrint end type base_type contains subroutine BasePrint(this) class(base_type) :: this end subroutine BasePrint end module Base_module program main use,intrinsic :: iso_c_binding Type(C_Ptr),Dimension(:),Pointer :: CArray character(kind=c_char),pointer :: nullc => null() character(kind=c_char,len=5),dimension(:),pointer::list1 allocate(list1(5)) CArray = (/(c_loc(list1(i)),i=1,5),c_loc(nullc)/) end Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe ifort -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilersFortran/conftest.exe -MT -O3 -fpp /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilersFortran/conftest.o Defined "USING_F2003" to "1" Fortran compiler supports F2003 ================================================================================ TEST checkFortran90Array from config.compilersFortran(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/compilersFortran.py:208) TESTING: checkFortran90Array from config.compilersFortran(config/BuildSystem/config/compilersFortran.py:208) Check for F90 array interfaces Executing: uname -s stdout: CYGWIN_NT-10.0 Cygwin detected: ignoring HAVE_F90_2PTR_ARG test ================================================================================ TEST checkFortranModuleInclude from config.compilersFortran(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/compilersFortran.py:295) TESTING: checkFortranModuleInclude from config.compilersFortran(config/BuildSystem/config/compilersFortran.py:295) Figures out what flag is used to specify the include path for Fortran modules Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe ifort -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilersFortran/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilersFortran -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -MT -O3 -fpp /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilersFortran/conftest.F90 Successful compile: Source: module configtest integer testint parameter (testint = 42) end module configtest Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe ifort -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilersFortran/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilersFortran -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilersFortran/confdir -MT -O3 -fpp /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilersFortran/conftest.F90 Successful compile: Source: program main use configtest write(*,*) testint end Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe ifort -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilersFortran/conftest.exe -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilersFortran/confdir -MT -O3 -fpp /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilersFortran/conftest.o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilersFortran/configtest.o compilers: Fortran module include flag -I found ================================================================================ TEST checkFortranModuleOutput from config.compilersFortran(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/compilersFortran.py:361) TESTING: checkFortranModuleOutput from config.compilersFortran(config/BuildSystem/config/compilersFortran.py:361) Figures out what flag is used to specify the include path for Fortran modules Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe ifort -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilersFortran/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilersFortran -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -module /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilersFortran/confdir -MT -O3 -fpp /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilersFortran/conftest.F90 Possible ERROR while running compiler: exit code 127 Source: module configtest integer testint parameter (testint = 42) end module configtest compilers: Fortran module output flag -module compile failed Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe ifort -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilersFortran/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilersFortran -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -module:/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilersFortran/confdir -MT -O3 -fpp /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilersFortran/conftest.F90 Successful compile: Source: module configtest integer testint parameter (testint = 42) end module configtest compilers: Fortran module output flag -module: found ================================================================================ TEST checkFortranTypeStar from config.compilersFortran(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/compilersFortran.py:135) TESTING: checkFortranTypeStar from config.compilersFortran(config/BuildSystem/config/compilersFortran.py:135) Determine whether the Fortran compiler handles type(*) Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe ifort -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilersFortran/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilersFortran -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -MT -O3 -fpp /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilersFortran/conftest.F90 Successful compile: Source: program main interface subroutine a(b) type(*) :: b(:) end subroutine end interface end Defined "HAVE_FORTRAN_TYPE_STAR" to "1" Fortran compiler supports type(*) ================================================================================ TEST checkFortranTypeInitialize from config.compilersFortran(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/compilersFortran.py:125) TESTING: checkFortranTypeInitialize from config.compilersFortran(config/BuildSystem/config/compilersFortran.py:125) Determines if PETSc objects in Fortran are initialized by default (doesn't work with common blocks) Defined "FORTRAN_TYPE_INITIALIZE" to " = -2" Initializing Fortran objects ================================================================================ TEST configureFortranFlush from config.compilersFortran(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/compilersFortran.py:116) TESTING: configureFortranFlush from config.compilersFortran(config/BuildSystem/config/compilersFortran.py:116) Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe ifort -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilersFortran/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilersFortran -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -MT -O3 -fpp /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilersFortran/conftest.F90 Successful compile: Source: program main call flush(6) end Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe ifort -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilersFortran/conftest.exe -MT -O3 -fpp /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilersFortran/conftest.o Defined "HAVE_FORTRAN_FLUSH" to "1" ================================================================================ TEST checkDependencyGenerationFlag from config.compilersFortran(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/compilersFortran.py:406) TESTING: checkDependencyGenerationFlag from config.compilersFortran(config/BuildSystem/config/compilersFortran.py:406) Check if -MMD works for dependency generation, and add it if it does Trying FC compiler flag -MMD -MP Rejected FC compiler flag -MMD -MP Trying FC compiler flag -MMD Rejected FC compiler flag -MMD Trying FC compiler flag -xMMD Rejected FC compiler flag -xMMD Trying FC compiler flag -qmakedep=gcc Rejected FC compiler flag -qmakedep=gcc Trying FC compiler flag -MD Rejected FC compiler flag -MD because no dependency file (/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.d) was generated Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe ifort -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilersFortran -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -MT -O3 -fpp -MMD -MP /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.F90 stdout: ifort: command line warning #10006: ignoring unknown option '/MMD' Successful compile: Source: program main end Rejecting compiler flag -MMD -MP due to ifort: command line warning #10006: ignoring unknown option '/MMD' Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe ifort -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilersFortran -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -MT -O3 -fpp -MMD /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.F90 stdout: ifort: command line warning #10006: ignoring unknown option '/MMD' Successful compile: Source: program main end Rejecting compiler flag -MMD due to ifort: command line warning #10006: ignoring unknown option '/MMD' Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe ifort -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilersFortran -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -MT -O3 -fpp -xMMD /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.F90 stdout: ifort: command line warning #10006: ignoring unknown option '/xMMD' Successful compile: Source: program main end Rejecting compiler flag -xMMD due to ifort: command line warning #10006: ignoring unknown option '/xMMD' Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe ifort -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilersFortran -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -MT -O3 -fpp -qmakedep=gcc /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.F90 stdout: ifort: command line warning #10006: ignoring unknown option '/qmakedep=gcc' Successful compile: Source: program main end Rejecting compiler flag -qmakedep=gcc due to ifort: command line warning #10006: ignoring unknown option '/qmakedep=gcc' Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe ifort -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilersFortran -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -MT -O3 -fpp -MD /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers/conftest.F90 stdout: ifort: command line warning #10121: overriding '/MT' with '/MD' Successful compile: Source: program main end child config.compilersFortran 49.462405 ================================================================================ TEST checkStdC from config.headers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/headers.py:105) TESTING: checkStdC from config.headers(config/BuildSystem/config/headers.py:105) Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #include #include int main() { ; return 0; } Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #define ISLOWER(c) ('a' <= (c) && (c) <= 'z') #define TOUPPER(c) (ISLOWER(c) ? 'A' + ((c) - 'a') : (c)) #define XOR(e, f) (((e) && !(f)) || (!(e) && (f))) int main() { int i; for(i = 0; i < 256; i++) if (XOR(islower(i), ISLOWER(i)) || toupper(i) != TOUPPER(i)) exit(2); exit(0); ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.o Testing executable /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.exe to see if it can be run Executing: /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.exe Executing: /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.exe ================================================================================ TEST checkStat from config.headers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/headers.py:138) TESTING: checkStat from config.headers(config/BuildSystem/config/headers.py:138) Checks whether stat file-mode macros are broken, and defines STAT_MACROS_BROKEN if they are Preprocessing source: #include "confdefs.h" #include "conffix.h" #include #include #if defined(S_ISBLK) && defined(S_IFDIR) # if S_ISBLK (S_IFDIR) You lose. # endif #endif #if defined(S_ISBLK) && defined(S_IFCHR) # if S_ISBLK (S_IFCHR) You lose. # endif #endif #if defined(S_ISLNK) && defined(S_IFREG) # if S_ISLNK (S_IFREG) You lose. # endif #endif #if defined(S_ISSOCK) && defined(S_IFREG) # if S_ISSOCK (S_IFREG) You lose. # endif #endif Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c ================================================================================ TEST checkSysWait from config.headers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/headers.py:173) TESTING: checkSysWait from config.headers(config/BuildSystem/config/headers.py:173) Check for POSIX.1 compatible sys/wait.h, and defines HAVE_SYS_WAIT_H if found Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.HEA\conftest.c(5): catastrophic error: cannot open source file "sys/wait.h" #include ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.HEA\conftest.c (code 4) Possible ERROR while running compiler: exit code 4 stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.HEA\conftest.c(5): catastrophic error: cannot open source file "sys/wait.h" #include ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.HEA\conftest.c (code 4)Source: #include "confdefs.h" #include "conffix.h" #include #include #ifndef WEXITSTATUS #define WEXITSTATUS(stat_val) ((unsigned)(stat_val) >> 8) #endif #ifndef WIFEXITED #define WIFEXITED(stat_val) (((stat_val) & 255) == 0) #endif int main() { int s; wait (&s); s = WIFEXITED (s) ? WEXITSTATUS (s) : 1; ; return 0; } ================================================================================ TEST checkTime from config.headers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/headers.py:195) TESTING: checkTime from config.headers(config/BuildSystem/config/headers.py:195) Checks if you can safely include both and , and if so defines TIME_WITH_SYS_TIME Checking for header: time.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_TIME_H" to "1" Checking for header: sys/time.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.HEA\conftest.c(3): error #2379: cannot open source file "sys/time.h" #include ^ #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\confdefs.h" #line 2 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conffix.h" #line 3 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:: Preprocess stderr after filtering:: ================================================================================ TEST checkMath from config.headers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/headers.py:201) TESTING: checkMath from config.headers(config/BuildSystem/config/headers.py:201) Checks for the math headers and defines Checking for header: math.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.HEA\conftest.c(6): error: identifier "M_PI" is undefined double pi = M_PI; ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.HEA\conftest.c (code 2) Possible ERROR while running compiler: exit code 2 stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.HEA\conftest.c(6): error: identifier "M_PI" is undefined double pi = M_PI; ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.HEA\conftest.c (code 2)Source: #include "confdefs.h" #include "conffix.h" #include int main() { double pi = M_PI; if (pi); ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #define _USE_MATH_DEFINES 1 #include int main() { double pi = M_PI; if (pi); ; return 0; } Defined "_USE_MATH_DEFINES" to "1" Activated Windows math #defines, like M_PI ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: setjmp.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SETJMP_H" to "1" ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: dos.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_DOS_H" to "1" ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: fcntl.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_FCNTL_H" to "1" ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: float.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_FLOAT_H" to "1" ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: io.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_IO_H" to "1" ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: malloc.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_MALLOC_H" to "1" ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: pwd.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.HEA\conftest.c(3): error #2379: cannot open source file "pwd.h" #include ^ #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\confdefs.h" #line 2 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conffix.h" #line 3 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:: Preprocess stderr after filtering:: ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: strings.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.HEA\conftest.c(3): error #2379: cannot open source file "strings.h" #include ^ #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\confdefs.h" #line 2 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conffix.h" #line 3 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:: Preprocess stderr after filtering:: ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: unistd.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.HEA\conftest.c(3): error #2379: cannot open source file "unistd.h" #include ^ #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\confdefs.h" #line 2 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conffix.h" #line 3 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:: Preprocess stderr after filtering:: ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/sysinfo.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.HEA\conftest.c(3): error #2379: cannot open source file "sys/sysinfo.h" #include ^ #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\confdefs.h" #line 2 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conffix.h" #line 3 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:: Preprocess stderr after filtering:: ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: machine/endian.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.HEA\conftest.c(3): error #2379: cannot open source file "machine/endian.h" #include ^ #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\confdefs.h" #line 2 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conffix.h" #line 3 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:: Preprocess stderr after filtering:: ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/param.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.HEA\conftest.c(3): error #2379: cannot open source file "sys/param.h" #include ^ #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\confdefs.h" #line 2 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conffix.h" #line 3 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:: Preprocess stderr after filtering:: ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/procfs.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.HEA\conftest.c(3): error #2379: cannot open source file "sys/procfs.h" #include ^ #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\confdefs.h" #line 2 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conffix.h" #line 3 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:: Preprocess stderr after filtering:: ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/resource.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.HEA\conftest.c(3): error #2379: cannot open source file "sys/resource.h" #include ^ #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\confdefs.h" #line 2 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conffix.h" #line 3 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:: Preprocess stderr after filtering:: ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/systeminfo.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.HEA\conftest.c(3): error #2379: cannot open source file "sys/systeminfo.h" #include ^ #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\confdefs.h" #line 2 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conffix.h" #line 3 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:: Preprocess stderr after filtering:: ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/times.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.HEA\conftest.c(3): error #2379: cannot open source file "sys/times.h" #include ^ #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\confdefs.h" #line 2 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conffix.h" #line 3 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:: Preprocess stderr after filtering:: ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/utsname.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.HEA\conftest.c(3): error #2379: cannot open source file "sys/utsname.h" #include ^ #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\confdefs.h" #line 2 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conffix.h" #line 3 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:: Preprocess stderr after filtering:: ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/socket.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.HEA\conftest.c(3): error #2379: cannot open source file "sys/socket.h" #include ^ #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\confdefs.h" #line 2 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conffix.h" #line 3 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:: Preprocess stderr after filtering:: ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/wait.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.HEA\conftest.c(3): error #2379: cannot open source file "sys/wait.h" #include ^ #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\confdefs.h" #line 2 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conffix.h" #line 3 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:: Preprocess stderr after filtering:: ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: netinet/in.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.HEA\conftest.c(3): error #2379: cannot open source file "netinet/in.h" #include ^ #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\confdefs.h" #line 2 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conffix.h" #line 3 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:: Preprocess stderr after filtering:: ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: netdb.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.HEA\conftest.c(3): error #2379: cannot open source file "netdb.h" #include ^ #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\confdefs.h" #line 2 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conffix.h" #line 3 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:: Preprocess stderr after filtering:: ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: Direct.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_DIRECT_H" to "1" ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: time.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_TIME_H" to "1" ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: Ws2tcpip.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_WS2TCPIP_H" to "1" ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/types.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SYS_TYPES_H" to "1" ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: WindowsX.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_WINDOWSX_H" to "1" ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: float.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_FLOAT_H" to "1" ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: ieeefp.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.HEA\conftest.c(3): error #2379: cannot open source file "ieeefp.h" #include ^ #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\confdefs.h" #line 2 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conffix.h" #line 3 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:: Preprocess stderr after filtering:: ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: stdint.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_STDINT_H" to "1" ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: pthread.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.HEA\conftest.c(3): error #2379: cannot open source file "pthread.h" #include ^ #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\confdefs.h" #line 2 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conffix.h" #line 3 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:: Preprocess stderr after filtering:: ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: inttypes.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_INTTYPES_H" to "1" ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: immintrin.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_IMMINTRIN_H" to "1" ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: zmmintrin.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 4 stdout: conftest.c C:\PROGRA~2\INTELS~1\COMPIL~1.274\windows\compiler\include\icc\zmmintrin.h(15): catastrophic error: #error directive: "Header should only be included from ." #error "Header should only be included from ." ^ #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\confdefs.h" #line 2 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conffix.h" #line 3 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\PROGRA~2\\INTELS~1\\COMPIL~1.274\\windows\\compiler\\include\\icc\\zmmintrin.h" Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:: Preprocess stderr after filtering:: ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: setjmp.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SETJMP_H" to "1" ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: dos.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_DOS_H" to "1" ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: fcntl.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_FCNTL_H" to "1" ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: float.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_FLOAT_H" to "1" ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: io.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_IO_H" to "1" ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: malloc.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_MALLOC_H" to "1" ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: pwd.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.HEA\conftest.c(3): error #2379: cannot open source file "pwd.h" #include ^ #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\confdefs.h" #line 2 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conffix.h" #line 3 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:: Preprocess stderr after filtering:: ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: strings.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.HEA\conftest.c(3): error #2379: cannot open source file "strings.h" #include ^ #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\confdefs.h" #line 2 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conffix.h" #line 3 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:: Preprocess stderr after filtering:: ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: unistd.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.HEA\conftest.c(3): error #2379: cannot open source file "unistd.h" #include ^ #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\confdefs.h" #line 2 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conffix.h" #line 3 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:: Preprocess stderr after filtering:: ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/sysinfo.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.HEA\conftest.c(3): error #2379: cannot open source file "sys/sysinfo.h" #include ^ #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\confdefs.h" #line 2 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conffix.h" #line 3 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:: Preprocess stderr after filtering:: ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: machine/endian.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.HEA\conftest.c(3): error #2379: cannot open source file "machine/endian.h" #include ^ #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\confdefs.h" #line 2 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conffix.h" #line 3 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:: Preprocess stderr after filtering:: ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/param.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.HEA\conftest.c(3): error #2379: cannot open source file "sys/param.h" #include ^ #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\confdefs.h" #line 2 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conffix.h" #line 3 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:: Preprocess stderr after filtering:: ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/procfs.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.HEA\conftest.c(3): error #2379: cannot open source file "sys/procfs.h" #include ^ #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\confdefs.h" #line 2 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conffix.h" #line 3 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:: Preprocess stderr after filtering:: ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/resource.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.HEA\conftest.c(3): error #2379: cannot open source file "sys/resource.h" #include ^ #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\confdefs.h" #line 2 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conffix.h" #line 3 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:: Preprocess stderr after filtering:: ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/systeminfo.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.HEA\conftest.c(3): error #2379: cannot open source file "sys/systeminfo.h" #include ^ #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\confdefs.h" #line 2 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conffix.h" #line 3 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:: Preprocess stderr after filtering:: ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/times.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.HEA\conftest.c(3): error #2379: cannot open source file "sys/times.h" #include ^ #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\confdefs.h" #line 2 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conffix.h" #line 3 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:: Preprocess stderr after filtering:: ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/utsname.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.HEA\conftest.c(3): error #2379: cannot open source file "sys/utsname.h" #include ^ #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\confdefs.h" #line 2 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conffix.h" #line 3 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:: Preprocess stderr after filtering:: ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/socket.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.HEA\conftest.c(3): error #2379: cannot open source file "sys/socket.h" #include ^ #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\confdefs.h" #line 2 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conffix.h" #line 3 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:: Preprocess stderr after filtering:: ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/wait.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.HEA\conftest.c(3): error #2379: cannot open source file "sys/wait.h" #include ^ #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\confdefs.h" #line 2 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conffix.h" #line 3 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:: Preprocess stderr after filtering:: ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: netinet/in.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.HEA\conftest.c(3): error #2379: cannot open source file "netinet/in.h" #include ^ #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\confdefs.h" #line 2 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conffix.h" #line 3 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:: Preprocess stderr after filtering:: ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: netdb.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.HEA\conftest.c(3): error #2379: cannot open source file "netdb.h" #include ^ #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\confdefs.h" #line 2 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conffix.h" #line 3 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:: Preprocess stderr after filtering:: ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: Direct.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_DIRECT_H" to "1" ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: time.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_TIME_H" to "1" ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: Ws2tcpip.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_WS2TCPIP_H" to "1" ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/types.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SYS_TYPES_H" to "1" ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: WindowsX.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_WINDOWSX_H" to "1" ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: float.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_FLOAT_H" to "1" ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: ieeefp.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.HEA\conftest.c(3): error #2379: cannot open source file "ieeefp.h" #include ^ #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\confdefs.h" #line 2 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conffix.h" #line 3 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:: Preprocess stderr after filtering:: ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: stdint.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_STDINT_H" to "1" ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: pthread.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.HEA\conftest.c(3): error #2379: cannot open source file "pthread.h" #include ^ #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\confdefs.h" #line 2 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conffix.h" #line 3 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:: Preprocess stderr after filtering:: ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: inttypes.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_INTTYPES_H" to "1" ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: immintrin.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_IMMINTRIN_H" to "1" ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: zmmintrin.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 4 stdout: conftest.c C:\PROGRA~2\INTELS~1\COMPIL~1.274\windows\compiler\include\icc\zmmintrin.h(15): catastrophic error: #error directive: "Header should only be included from ." #error "Header should only be included from ." ^ #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\confdefs.h" #line 2 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conffix.h" #line 3 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\PROGRA~2\\INTELS~1\\COMPIL~1.274\\windows\\compiler\\include\\icc\\zmmintrin.h" Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:: Preprocess stderr after filtering:: ================================================================================ TEST checkRecursiveMacros from config.headers(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/headers.py:216) TESTING: checkRecursiveMacros from config.headers(config/BuildSystem/config/headers.py:216) Checks that the preprocessor allows recursive macros, and if not defines HAVE_BROKEN_RECURSIVE_MACRO Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" void a(int i, int j) {} #define a(b) a(b,__LINE__) int main() { a(0); ; return 0; } child config.headers 113.726298 ================================================================================ TEST configureCacheDetails from config.utilities.cacheDetails(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/utilities/cacheDetails.py:78) TESTING: configureCacheDetails from config.utilities.cacheDetails(config/BuildSystem/config/utilities/cacheDetails.py:78) Try to determine the size and associativity of the cache. All intermediate test results are stored in /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails/conftest.c stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.CAC\conftest.c(3): catastrophic error: cannot open source file "unistd.h" #include ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.CAC\conftest.c (code 4) Possible ERROR while running compiler: exit code 4 stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.CAC\conftest.c(3): catastrophic error: cannot open source file "unistd.h" #include ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.CAC\conftest.c (code 4)Source: #include "confdefs.h" #include "conffix.h" #include long getconf_LEVEL1_DCACHE_LINESIZE() { long val = sysconf(_SC_LEVEL1_DCACHE_LINESIZE); return (16 <= val && val <= 2147483647) ? val : 32; } int main() { ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails/conftest.c stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.CAC\conftest.c(4): warning #144: a value of type "int" cannot be used to initialize an entity of type "FILE *" long getconf_LEVEL1_DCACHE_LINESIZE() { long val=-1; FILE *f = popen("getconf LEVEL1_DCACHE_LINESIZE","r"); fscanf(f,"%ld",&val); pclose(f); return (16 <= val && val <= 2147483647) ? val : 32; } ^ Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include long getconf_LEVEL1_DCACHE_LINESIZE() { long val=-1; FILE *f = popen("getconf LEVEL1_DCACHE_LINESIZE","r"); fscanf(f,"%ld",&val); pclose(f); return (16 <= val && val <= 2147483647) ? val : 32; } int main() { ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails/conftest.c stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.CAC\conftest.c(5): warning #144: a value of type "int" cannot be used to initialize an entity of type "FILE *" long getconf_LEVEL1_DCACHE_LINESIZE() { long val=-1; FILE *f = popen("getconf LEVEL1_DCACHE_LINESIZE","r"); fscanf(f,"%ld",&val); pclose(f); return (16 <= val && val <= 2147483647) ? val : 32; } ^ Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include long getconf_LEVEL1_DCACHE_LINESIZE() { long val=-1; FILE *f = popen("getconf LEVEL1_DCACHE_LINESIZE","r"); fscanf(f,"%ld",&val); pclose(f); return (16 <= val && val <= 2147483647) ? val : 32; } int main() { FILE *output = fopen("conftestval","w"); if (!output) return 1; fprintf(output,"%ld",getconf_LEVEL1_DCACHE_LINESIZE()); fclose(output);; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails/conftest.o stdout: conftest.obj : error LNK2019: unresolved external symbol popen referenced in function main conftest.obj : error LNK2019: unresolved external symbol pclose referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.CAC\conftest.exe : fatal error LNK1120: 2 unresolved externals Possible ERROR while running linker: exit code 96 stdout: conftest.obj : error LNK2019: unresolved external symbol popen referenced in function main conftest.obj : error LNK2019: unresolved external symbol pclose referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.CAC\conftest.exe : fatal error LNK1120: 2 unresolved externalsCould not determine LEVEL1_DCACHE_LINESIZE, using default 32 Defined "LEVEL1_DCACHE_LINESIZE" to "32" child config.utilities.cacheDetails 7.611160 ================================================================================ TEST check_struct_sigaction from config.types(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/types.py:43) TESTING: check_struct_sigaction from config.types(config/BuildSystem/config/types.py:43) Checks if "struct sigaction" exists in signal.h. This check is for C89 check. Checking for type: struct sigaction All intermediate test results are stored in /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types/conftest.c stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.TYP\conftest.c(11): error: incomplete type is not allowed struct sigaction a;; ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.TYP\conftest.c (code 2) Possible ERROR while running compiler: exit code 2 stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.TYP\conftest.c(11): error: incomplete type is not allowed struct sigaction a;; ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.TYP\conftest.c (code 2)Source: #include "confdefs.h" #include "conffix.h" #include #include #include #include int main() { struct sigaction a;; return 0; } struct sigaction found ================================================================================ TEST check__int64 from config.types(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/types.py:49) TESTING: check__int64 from config.types(config/BuildSystem/config/types.py:49) Checks if __int64 exists. This is primarily for windows. Checking for type: __int64 Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #include int main() { __int64 a;; return 0; } __int64 found Defined "HAVE___INT64" to "1" ================================================================================ TEST checkSizeTypes from config.types(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/types.py:55) TESTING: checkSizeTypes from config.types(config/BuildSystem/config/types.py:55) Checks for types associated with sizes, such as size_t. Checking for type: size_t Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #include int main() { size_t a;; return 0; } size_t found ================================================================================ TEST checkFileTypes from config.types(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/types.py:65) TESTING: checkFileTypes from config.types(config/BuildSystem/config/types.py:65) Checks for types associated with files, such as mode_t, off_t, etc. Checking for type: mode_t Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types/conftest.c stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.TYP\conftest.c(11): error: identifier "mode_t" is undefined mode_t a;; ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.TYP\conftest.c (code 2) Possible ERROR while running compiler: exit code 2 stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.TYP\conftest.c(11): error: identifier "mode_t" is undefined mode_t a;; ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.TYP\conftest.c (code 2)Source: #include "confdefs.h" #include "conffix.h" #include #include #include int main() { mode_t a;; return 0; } Typedefed "int" to "mode_t" Checking for type: off_t Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #include int main() { off_t a;; return 0; } off_t found ================================================================================ TEST checkIntegerTypes from config.types(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/types.py:60) TESTING: checkIntegerTypes from config.types(config/BuildSystem/config/types.py:60) Checks for types associated with integers, such as int32_t. Checking for type: int32_t Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types/conftest.c stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.TYP\conftest.c(11): error: identifier "int32_t" is undefined int32_t a;; ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.TYP\conftest.c (code 2) Possible ERROR while running compiler: exit code 2 stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.TYP\conftest.c(11): error: identifier "int32_t" is undefined int32_t a;; ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.TYP\conftest.c (code 2)Source: #include "confdefs.h" #include "conffix.h" #include #include #include int main() { int32_t a;; return 0; } Typedefed "int" to "int32_t" ================================================================================ TEST checkPID from config.types(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/types.py:71) TESTING: checkPID from config.types(config/BuildSystem/config/types.py:71) Checks for pid_t, and defines it if necessary Checking for type: pid_t Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types/conftest.c stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.TYP\conftest.c(11): error: identifier "pid_t" is undefined pid_t a;; ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.TYP\conftest.c (code 2) Possible ERROR while running compiler: exit code 2 stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.TYP\conftest.c(11): error: identifier "pid_t" is undefined pid_t a;; ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.TYP\conftest.c (code 2)Source: #include "confdefs.h" #include "conffix.h" #include #include #include int main() { pid_t a;; return 0; } Typedefed "int" to "pid_t" ================================================================================ TEST checkUID from config.types(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/types.py:75) TESTING: checkUID from config.types(config/BuildSystem/config/types.py:75) Checks for uid_t and gid_t, and defines them if necessary Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types/conftest.c Defined "uid_t" to "int" Defined "gid_t" to "int" ================================================================================ TEST checkC99Complex from config.types(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/types.py:82) TESTING: checkC99Complex from config.types(config/BuildSystem/config/types.py:82) Check for complex numbers in in C99 std Note that since PETSc source code uses _Complex we test specifically for that, not complex Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types/conftest.c stdout: conftest.c C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2018.5.274\windows\compiler\include\complex.h(34): warning #1224: #warning directive: "The /Qstd=c99 compilation option is required to enable C99 support for C programs" # warning "The /Qstd=c99 compilation option is required to enable C99 support for C programs" ^ C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.TYP\conftest.c(6): error: expected a ";" double _Complex x; ^ C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.TYP\conftest.c(7): error: identifier "x" is undefined x = I; ^ C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.TYP\conftest.c(7): error: identifier "I" is undefined x = I; ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.TYP\conftest.c (code 2) Possible ERROR while running compiler: exit code 2 stdout: conftest.c C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2018.5.274\windows\compiler\include\complex.h(34): warning #1224: #warning directive: "The /Qstd=c99 compilation option is required to enable C99 support for C programs" # warning "The /Qstd=c99 compilation option is required to enable C99 support for C programs" ^ C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.TYP\conftest.c(6): error: expected a ";" double _Complex x; ^ C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.TYP\conftest.c(7): error: identifier "x" is undefined x = I; ^ C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.TYP\conftest.c(7): error: identifier "I" is undefined x = I; ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.TYP\conftest.c (code 2)Source: #include "confdefs.h" #include "conffix.h" #include int main() { double _Complex x; x = I; ; return 0; } ================================================================================ TEST checkCxxComplex from config.types(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/types.py:93) TESTING: checkCxxComplex from config.types(config/BuildSystem/config/types.py:93) Check for complex numbers in namespace std Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -MT -GR -EHsc -O3 -TP /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types/conftest.cc stdout: conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { std::complex x; ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types/conftest.exe -Qwd10161 -MT -GR -EHsc -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types/conftest.o Defined "HAVE_CXX_COMPLEX" to "1" ================================================================================ TEST checkFortranKind from config.types(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/types.py:114) TESTING: checkFortranKind from config.types(config/BuildSystem/config/types.py:114) Checks whether selected_int_kind etc work USE_FORTRANKIND Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe ifort -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilersFortran -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -MT -O3 -fpp /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types/conftest.F90 Successful compile: Source: program main integer(kind=selected_int_kind(10)) i real(kind=selected_real_kind(10)) d end Defined "USE_FORTRANKIND" to "1" ================================================================================ TEST checkConst from config.types(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/types.py:126) TESTING: checkConst from config.types(config/BuildSystem/config/types.py:126) Checks for working const, and if not found defines it to empty string Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types/conftest.c stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.TYP\conftest.c(25): warning #592: variable "x" is used before its value is set if (x[0]); ^ C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.TYP\conftest.c(30): warning #592: variable "t" is used before its value is set *t++ = 0; ^ C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.TYP\conftest.c(46): warning #592: variable "b" is used before its value is set struct s *b; b->j = 5; ^ Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { /* Ultrix mips cc rejects this. */ typedef int charset[2]; const charset x; /* SunOS 4.1.1 cc rejects this. */ char const *const *ccp; char **p; /* NEC SVR4.0.2 mips cc rejects this. */ struct point {int x, y;}; static struct point const zero = {0,0}; /* AIX XL C 1.02.0.0 rejects this. It does not let you subtract one const X* pointer from another in an arm of an if-expression whose if-part is not a constant expression */ const char *g = "string"; ccp = &g + (g ? g-g : 0); /* HPUX 7.0 cc rejects these. */ ++ccp; p = (char**) ccp; ccp = (char const *const *) p; /* This section avoids unused variable warnings */ if (zero.x); if (x[0]); { /* SCO 3.2v4 cc rejects this. */ char *t; char const *s = 0 ? (char *) 0 : (char const *) 0; *t++ = 0; if (*s); } { /* Someone thinks the Sun supposedly-ANSI compiler will reject this. */ int x[] = {25, 17}; const int *foo = &x[0]; ++foo; } { /* Sun SC1.0 ANSI compiler rejects this -- but not the above. */ typedef const int *iptr; iptr p = 0; ++p; } { /* AIX XL C 1.02.0.0 rejects this saying "k.c", line 2.27: 1506-025 (S) Operand must be a modifiable lvalue. */ struct s { int j; const int *ap[3]; }; struct s *b; b->j = 5; } { /* ULTRIX-32 V3.1 (Rev 9) vcc rejects this */ const int foo = 10; /* Get rid of unused variable warning */ if (foo); } ; return 0; } ================================================================================ TEST checkSizeof from config.types(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/types.py:182) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:182) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: short Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #include #include char assert_sizeof[(sizeof(short)==2)*2-1]; Defined "SIZEOF_SHORT" to "2" ================================================================================ TEST checkSizeof from config.types(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/types.py:182) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:182) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: int Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #include #include char assert_sizeof[(sizeof(int)==4)*2-1]; Defined "SIZEOF_INT" to "4" ================================================================================ TEST checkSizeof from config.types(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/types.py:182) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:182) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: long Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types/conftest.c stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.TYP\conftest.c(8): error: the size of an array must be greater than zero char assert_sizeof[(sizeof(long)==8)*2-1]; ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.TYP\conftest.c (code 2) Possible ERROR while running compiler: exit code 2 stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.TYP\conftest.c(8): error: the size of an array must be greater than zero char assert_sizeof[(sizeof(long)==8)*2-1]; ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.TYP\conftest.c (code 2)Source: #include "confdefs.h" #include "conffix.h" #include #include #include #include char assert_sizeof[(sizeof(long)==8)*2-1]; Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #include #include char assert_sizeof[(sizeof(long)==4)*2-1]; Defined "SIZEOF_LONG" to "4" ================================================================================ TEST checkSizeof from config.types(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/types.py:182) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:182) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: void * Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #include #include char assert_sizeof[(sizeof(void *)==8)*2-1]; Defined "SIZEOF_VOID_P" to "8" ================================================================================ TEST checkSizeof from config.types(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/types.py:182) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:182) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: long long Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #include #include char assert_sizeof[(sizeof(long long)==8)*2-1]; Defined "SIZEOF_LONG_LONG" to "8" ================================================================================ TEST checkSizeof from config.types(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/types.py:182) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:182) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: size_t Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #include #include char assert_sizeof[(sizeof(size_t)==8)*2-1]; Defined "SIZEOF_SIZE_T" to "8" ================================================================================ TEST checkVisibility from config.types(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/types.py:213) TESTING: checkVisibility from config.types(config/BuildSystem/config/types.py:213) Disabled visibility attributes due to static build child config.types 42.877256 ================================================================================ TEST configureMemAlign from PETSc.options.memAlign(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/PETSc/options/memAlign.py:29) TESTING: configureMemAlign from PETSc.options.memAlign(config/PETSc/options/memAlign.py:29) Choose alignment Defined "MEMALIGN" to "16" Memory alignment is 16 child PETSc.options.memAlign 0.005143 ================================================================================ TEST check from config.libraries(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/libraries.py:157) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:157) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [handle_sigfpes] in library ['fpe'] [] All intermediate test results are stored in /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char handle_sigfpes(); static void _check_handle_sigfpes() { handle_sigfpes(); } int main() { _check_handle_sigfpes();; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries/conftest.o -lfpe stdout: ipo: error #11018: Cannot open libfpe.lib LINK : fatal error LNK1181: cannot open input file 'libfpe.lib' Possible ERROR while running linker: exit code 157 stdout: ipo: error #11018: Cannot open libfpe.lib LINK : fatal error LNK1181: cannot open input file 'libfpe.lib'================================================================================ TEST check from config.libraries(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/libraries.py:157) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:157) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [socket] in library ['socket', 'nsl'] [] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char socket(); static void _check_socket() { socket(); } int main() { _check_socket();; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries/conftest.o -lsocket -lnsl stdout: ipo: error #11018: Cannot open libsocket.lib ipo: error #11018: Cannot open libnsl.lib LINK : fatal error LNK1181: cannot open input file 'libsocket.lib' Possible ERROR while running linker: exit code 157 stdout: ipo: error #11018: Cannot open libsocket.lib ipo: error #11018: Cannot open libnsl.lib LINK : fatal error LNK1181: cannot open input file 'libsocket.lib'================================================================================ TEST check from config.libraries(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/libraries.py:157) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:157) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [handle_sigfpes] in library ['fpe'] [] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char handle_sigfpes(); static void _check_handle_sigfpes() { handle_sigfpes(); } int main() { _check_handle_sigfpes();; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries/conftest.o -lfpe stdout: ipo: error #11018: Cannot open libfpe.lib LINK : fatal error LNK1181: cannot open input file 'libfpe.lib' Possible ERROR while running linker: exit code 157 stdout: ipo: error #11018: Cannot open libfpe.lib LINK : fatal error LNK1181: cannot open input file 'libfpe.lib'================================================================================ TEST check from config.libraries(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/libraries.py:157) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:157) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [socket] in library ['socket', 'nsl'] [] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char socket(); static void _check_socket() { socket(); } int main() { _check_socket();; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries/conftest.o -lsocket -lnsl stdout: ipo: error #11018: Cannot open libsocket.lib ipo: error #11018: Cannot open libnsl.lib LINK : fatal error LNK1181: cannot open input file 'libsocket.lib' Possible ERROR while running linker: exit code 157 stdout: ipo: error #11018: Cannot open libsocket.lib ipo: error #11018: Cannot open libnsl.lib LINK : fatal error LNK1181: cannot open input file 'libsocket.lib'================================================================================ TEST checkMath from config.libraries(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/libraries.py:264) TESTING: checkMath from config.libraries(config/BuildSystem/config/libraries.py:264) Check for sin() in libm, the math library Checking for functions [sin floor log10 pow] in library [''] [] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include double sin(double); static void _check_sin() { double x,y; scanf("%lf",&x); y = sin(x); printf("%f",y); ; } #include double floor(double); static void _check_floor() { double x,y; scanf("%lf",&x); y = floor(x); printf("%f",y); ; } #include double log10(double); static void _check_log10() { double x,y; scanf("%lf",&x); y = log10(x); printf("%f",y); ; } #include double pow(double, double); static void _check_pow() { double x,y; scanf("%lf",&x); y = pow(x,x); printf("%f",y); ; } int main() { _check_sin(); _check_floor(); _check_log10(); _check_pow();; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries/conftest.o CheckMath: using math library [] ================================================================================ TEST checkMathErf from config.libraries(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/libraries.py:283) TESTING: checkMathErf from config.libraries(config/BuildSystem/config/libraries.py:283) Check for erf() in libm, the math library Checking for functions [erf] in library [] [] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_erf() { double (*checkErf)(double) = erf;double x = 0,y; y = (*checkErf)(x); } int main() { _check_erf();; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries/conftest.o erf() found Defined "HAVE_ERF" to "1" ================================================================================ TEST checkMathTgamma from config.libraries(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/libraries.py:292) TESTING: checkMathTgamma from config.libraries(config/BuildSystem/config/libraries.py:292) Check for tgamma() in libm, the math library Checking for functions [tgamma] in library [] [] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_tgamma() { double (*checkTgamma)(double) = tgamma;double x = 0,y; y = (*checkTgamma)(x); } int main() { _check_tgamma();; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries/conftest.o tgamma() found Defined "HAVE_TGAMMA" to "1" ================================================================================ TEST checkMathFenv from config.libraries(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/libraries.py:301) TESTING: checkMathFenv from config.libraries(config/BuildSystem/config/libraries.py:301) Checks if can be used with FE_DFL_ENV Checking for functions [fesetenv] in library [] [] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_fesetenv() { fesetenv(FE_DFL_ENV);; } int main() { _check_fesetenv();; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries/conftest.o Defined "HAVE_FENV_H" to "1" ================================================================================ TEST checkMathLog2 from config.libraries(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/libraries.py:309) TESTING: checkMathLog2 from config.libraries(config/BuildSystem/config/libraries.py:309) Check for log2() in libm, the math library Checking for functions [log2] in library [] [] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_log2() { double (*checkLog2)(double) = log2; double x = 2.5, y = (*checkLog2)(x); } int main() { _check_log2();; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries/conftest.o log2() found Defined "HAVE_LOG2" to "1" ================================================================================ TEST checkRealtime from config.libraries(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/libraries.py:318) TESTING: checkRealtime from config.libraries(config/BuildSystem/config/libraries.py:318) Check for presence of clock_gettime() in realtime library (POSIX Realtime extensions) Checking for functions [clock_gettime] in library [''] [] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries/conftest.c stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.LIB\conftest.c(5): error: incomplete type is not allowed static void _check_clock_gettime() { struct timespec tp; clock_gettime(CLOCK_REALTIME,&tp);; } ^ C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.LIB\conftest.c(5): error: identifier "CLOCK_REALTIME" is undefined static void _check_clock_gettime() { struct timespec tp; clock_gettime(CLOCK_REALTIME,&tp);; } ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.LIB\conftest.c (code 2) Possible ERROR while running compiler: exit code 2 stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.LIB\conftest.c(5): error: incomplete type is not allowed static void _check_clock_gettime() { struct timespec tp; clock_gettime(CLOCK_REALTIME,&tp);; } ^ C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.LIB\conftest.c(5): error: identifier "CLOCK_REALTIME" is undefined static void _check_clock_gettime() { struct timespec tp; clock_gettime(CLOCK_REALTIME,&tp);; } ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.LIB\conftest.c (code 2)Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_clock_gettime() { struct timespec tp; clock_gettime(CLOCK_REALTIME,&tp);; } int main() { _check_clock_gettime();; return 0; } Compile failed inside link Checking for functions [clock_gettime] in library ['rt'] [] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries/conftest.c stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.LIB\conftest.c(5): error: incomplete type is not allowed static void _check_clock_gettime() { struct timespec tp; clock_gettime(CLOCK_REALTIME,&tp);; } ^ C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.LIB\conftest.c(5): error: identifier "CLOCK_REALTIME" is undefined static void _check_clock_gettime() { struct timespec tp; clock_gettime(CLOCK_REALTIME,&tp);; } ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.LIB\conftest.c (code 2) Possible ERROR while running compiler: exit code 2 stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.LIB\conftest.c(5): error: incomplete type is not allowed static void _check_clock_gettime() { struct timespec tp; clock_gettime(CLOCK_REALTIME,&tp);; } ^ C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.LIB\conftest.c(5): error: identifier "CLOCK_REALTIME" is undefined static void _check_clock_gettime() { struct timespec tp; clock_gettime(CLOCK_REALTIME,&tp);; } ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.LIB\conftest.c (code 2)Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_clock_gettime() { struct timespec tp; clock_gettime(CLOCK_REALTIME,&tp);; } int main() { _check_clock_gettime();; return 0; } Compile failed inside link Warning: No realtime library found ================================================================================ TEST checkDynamic from config.libraries(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/libraries.py:334) TESTING: checkDynamic from config.libraries(config/BuildSystem/config/libraries.py:334) Check for the header and libraries necessary for dynamic library manipulation Checking for functions [dlopen] in library ['dl'] [] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dlopen(); static void _check_dlopen() { dlopen(); } int main() { _check_dlopen();; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries/conftest.o -ldl stdout: ipo: error #11018: Cannot open libdl.lib LINK : fatal error LNK1181: cannot open input file 'libdl.lib' Possible ERROR while running linker: exit code 157 stdout: ipo: error #11018: Cannot open libdl.lib LINK : fatal error LNK1181: cannot open input file 'libdl.lib'Checking for header: dlfcn.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.HEA\conftest.c(3): error #2379: cannot open source file "dlfcn.h" #include ^ #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\confdefs.h" #line 2 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conffix.h" typedef int int32_t; typedef int mode_t; typedef int pid_t; #line 3 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:: Preprocess stderr after filtering:: child config.libraries 43.326210 ================================================================================ TEST configureLibraryOptions from PETSc.options.libraryOptions(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/PETSc/options/libraryOptions.py:37) TESTING: configureLibraryOptions from PETSc.options.libraryOptions(config/PETSc/options/libraryOptions.py:37) Sets PETSC_USE_DEBUG, PETSC_USE_INFO, PETSC_USE_LOG, PETSC_USE_CTABLE, PETSC_USE_FORTRAN_KERNELS, and PETSC_USE_AVX512_KERNELS Defined "USE_LOG" to "1" Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -qversion stdout: icl: command line warning #10006: ignoring unknown option '/qversion' icl: command line error: no files specified; for help type "icl /help" Defined "USE_MALLOC_COALESCED" to "1" Defined "USE_INFO" to "1" Defined "USE_CTABLE" to "1" Defined "USE_BACKWARD_LOOP" to "1" **********Checking if running on BGL/IBM detected Checking for functions [bgl_perfctr_void] in library [''] [] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char bgl_perfctr_void(); static void _check_bgl_perfctr_void() { bgl_perfctr_void(); } int main() { _check_bgl_perfctr_void();; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries/conftest.o stdout: conftest.obj : error LNK2019: unresolved external symbol bgl_perfctr_void referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.LIB\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: exit code 96 stdout: conftest.obj : error LNK2019: unresolved external symbol bgl_perfctr_void referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.LIB\conftest.exe : fatal error LNK1120: 1 unresolved externals Checking for functions [ADIOI_BGL_Open] in library [''] [] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char ADIOI_BGL_Open(); static void _check_ADIOI_BGL_Open() { ADIOI_BGL_Open(); } int main() { _check_ADIOI_BGL_Open();; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries/conftest.o stdout: conftest.obj : error LNK2019: unresolved external symbol ADIOI_BGL_Open referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.LIB\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: exit code 96 stdout: conftest.obj : error LNK2019: unresolved external symbol ADIOI_BGL_Open referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.LIB\conftest.exe : fatal error LNK1120: 1 unresolved externals *********BGL/IBM test failure Defined "USE_AVX512_KERNELS" to "1" Defined "Alignx(a,b)" to " " ================================================================================ TEST configureISColorValueType from PETSc.options.libraryOptions(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/PETSc/options/libraryOptions.py:95) TESTING: configureISColorValueType from PETSc.options.libraryOptions(config/PETSc/options/libraryOptions.py:95) Sets PETSC_IS_COLOR_VALUE_TYPE, MPIU_COLORING_VALUE, IS_COLORING_MAX required by ISColor Defined "MPIU_COLORING_VALUE" to "MPI_UNSIGNED_SHORT" Defined "IS_COLORING_MAX" to "USHRT_MAX" Defined "IS_COLOR_VALUE_TYPE" to "short" Defined "IS_COLOR_VALUE_TYPE_F" to "integer2" child PETSc.options.libraryOptions 8.135874 child config.atomics 0.000006 ================================================================================ TEST checkSysinfo from config.functions(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/functions.py:106) TESTING: checkSysinfo from config.functions(config/BuildSystem/config/functions.py:106) Check whether sysinfo takes three arguments, and if it does define HAVE_SYSINFO_3ARG Checking for functions [sysinfo] All intermediate test results are stored in /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char sysinfo(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_sysinfo) || defined (__stub___sysinfo) sysinfo_will_always_fail_with_ENOSYS(); #else sysinfo(); #endif ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o stdout: conftest.obj : error LNK2019: unresolved external symbol sysinfo referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: exit code 96 stdout: conftest.obj : error LNK2019: unresolved external symbol sysinfo referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 1 unresolved externals================================================================================ TEST checkVPrintf from config.functions(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/functions.py:125) TESTING: checkVPrintf from config.functions(config/BuildSystem/config/functions.py:125) Checks whether vprintf requires a char * last argument, and if it does defines HAVE_VPRINTF_CHAR Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.c stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.c(8): warning #592: variable "Argp" is used before its value is set vprintf( "%d", Argp ); ^ Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include int main() { va_list Argp; vprintf( "%d", Argp ); ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o ================================================================================ TEST checkVFPrintf from config.functions(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/functions.py:131) TESTING: checkVFPrintf from config.functions(config/BuildSystem/config/functions.py:131) Checks whether vfprintf requires a char * last argument, and if it does defines HAVE_VFPRINTF_CHAR Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.c stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.c(8): warning #592: variable "Argp" is used before its value is set vfprintf(stdout, "%d", Argp ); ^ Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include int main() { va_list Argp; vfprintf(stdout, "%d", Argp ); ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o ================================================================================ TEST checkVSNPrintf from config.functions(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/functions.py:137) TESTING: checkVSNPrintf from config.functions(config/BuildSystem/config/functions.py:137) Checks whether vsnprintf requires a char * last argument, and if it does defines HAVE_VSNPRINTF_CHAR Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.c stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.c(8): warning #592: variable "Argp" is used before its value is set vsnprintf(str,5, "%d", Argp ); ^ Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include int main() { va_list Argp;char str[6]; vsnprintf(str,5, "%d", Argp ); ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o Defined "HAVE_VSNPRINTF" to "1" ================================================================================ TEST checkNanosleep from config.functions(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/functions.py:167) TESTING: checkNanosleep from config.functions(config/BuildSystem/config/functions.py:167) Check for functional nanosleep() - as time.h behaves differently for different compiler flags - like -std=c89 Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.c stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.c(6): error: incomplete type is not allowed struct timespec tp; ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.c (code 2) Possible ERROR while running compiler: exit code 2 stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.c(6): error: incomplete type is not allowed struct timespec tp; ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.c (code 2)Source: #include "confdefs.h" #include "conffix.h" #include int main() { struct timespec tp; tp.tv_sec = 0; tp.tv_nsec = (long)(1e9); nanosleep(&tp,0); ; return 0; } Compile failed inside link ================================================================================ TEST checkMemmove from config.functions(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/functions.py:173) TESTING: checkMemmove from config.functions(config/BuildSystem/config/functions.py:173) Check for functional memmove() - as MS VC requires correct includes to for this test Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { char c1[1], c2[1] = "c"; size_t n=1; memmove(c1,c2,n); ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o Defined "HAVE_MEMMOVE" to "1" ================================================================================ TEST checkSignalHandlerType from config.functions(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/functions.py:143) TESTING: checkSignalHandlerType from config.functions(config/BuildSystem/config/functions.py:143) Checks the type of C++ signals handlers, and defines SIGNAL_CAST to the correct value Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -MT -GR -EHsc -O3 -TP /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.cc stdout: conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include static void myhandler(int sig) {} int main() { signal(SIGFPE,myhandler); ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.exe -Qwd10161 -MT -GR -EHsc -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o Defined "SIGNAL_CAST" to " " ================================================================================ TEST checkFreeReturnType from config.functions(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/functions.py:153) TESTING: checkFreeReturnType from config.functions(config/BuildSystem/config/functions.py:153) Checks whether free returns void or int, and defines HAVE_FREE_RETURN_INT Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.c stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.c(6): warning #592: variable "p" is used before its value is set int ierr; void *p; ierr = free(p); return 0; ^ C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.c(6): error: a value of type "void" cannot be assigned to an entity of type "int" int ierr; void *p; ierr = free(p); return 0; ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.c (code 2) Possible ERROR while running compiler: exit code 2 stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.c(6): warning #592: variable "p" is used before its value is set int ierr; void *p; ierr = free(p); return 0; ^ C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.c(6): error: a value of type "void" cannot be assigned to an entity of type "int" int ierr; void *p; ierr = free(p); return 0; ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.c (code 2)Source: #include "confdefs.h" #include "conffix.h" #include int main() { int ierr; void *p; ierr = free(p); return 0; ; return 0; } Compile failed inside link ================================================================================ TEST checkVariableArgumentLists from config.functions(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/functions.py:159) TESTING: checkVariableArgumentLists from config.functions(config/BuildSystem/config/functions.py:159) Checks whether the variable argument list functionality is working Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.c stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.c(7): warning #592: variable "l2" is used before its value is set va_copy(l1, l2); ^ Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { va_list l1, l2; va_copy(l1, l2); return 0; ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o Defined "HAVE_VA_COPY" to "1" ================================================================================ TEST checkClassify from config.functions(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/functions.py:85) TESTING: checkClassify from config.functions(config/BuildSystem/config/functions.py:85) Recursive decompose to rapidly classify functions as found or missing To confirm that a function is missing, we require a compile/link failure with only that function in a compilation unit. In contrast, we can confirm that many functions are present by compiling them all together in a large compilation unit. We optimistically compile everything together, then trim all functions that were named in the error message and bisect the result. The trimming is only an optimization to increase the likelihood of a big-batch compile succeeding; we do not rely on the compiler naming missing functions. Checking for functions [rand getdomainname _access snprintf realpath dlsym bzero _getcwd getwd uname _lseek sleep _sleep lseek usleep dlclose gethostname clock access _snprintf dlerror fork getpagesize sbreak memalign getcwd gethostbyname readlink _set_output_format PXFGETARG strcasecmp dlopen drand48 socket popen getrusage _mkdir time stricmp] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char rand(); char getdomainname(); char _access(); char snprintf(); char realpath(); char dlsym(); char bzero(); char _getcwd(); char getwd(); char uname(); char _lseek(); char sleep(); char _sleep(); char lseek(); char usleep(); char dlclose(); char gethostname(); char clock(); char access(); char _snprintf(); char dlerror(); char fork(); char getpagesize(); char sbreak(); char memalign(); char getcwd(); char gethostbyname(); char readlink(); char _set_output_format(); char PXFGETARG(); char strcasecmp(); char dlopen(); char drand48(); char socket(); char popen(); char getrusage(); char _mkdir(); char time(); char stricmp(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_rand) || defined (__stub___rand) rand_will_always_fail_with_ENOSYS(); #else rand(); #endif #if defined (__stub_getdomainname) || defined (__stub___getdomainname) getdomainname_will_always_fail_with_ENOSYS(); #else getdomainname(); #endif #if defined (__stub__access) || defined (__stub____access) _access_will_always_fail_with_ENOSYS(); #else _access(); #endif #if defined (__stub_snprintf) || defined (__stub___snprintf) snprintf_will_always_fail_with_ENOSYS(); #else snprintf(); #endif #if defined (__stub_realpath) || defined (__stub___realpath) realpath_will_always_fail_with_ENOSYS(); #else realpath(); #endif #if defined (__stub_dlsym) || defined (__stub___dlsym) dlsym_will_always_fail_with_ENOSYS(); #else dlsym(); #endif #if defined (__stub_bzero) || defined (__stub___bzero) bzero_will_always_fail_with_ENOSYS(); #else bzero(); #endif #if defined (__stub__getcwd) || defined (__stub____getcwd) _getcwd_will_always_fail_with_ENOSYS(); #else _getcwd(); #endif #if defined (__stub_getwd) || defined (__stub___getwd) getwd_will_always_fail_with_ENOSYS(); #else getwd(); #endif #if defined (__stub_uname) || defined (__stub___uname) uname_will_always_fail_with_ENOSYS(); #else uname(); #endif #if defined (__stub__lseek) || defined (__stub____lseek) _lseek_will_always_fail_with_ENOSYS(); #else _lseek(); #endif #if defined (__stub_sleep) || defined (__stub___sleep) sleep_will_always_fail_with_ENOSYS(); #else sleep(); #endif #if defined (__stub__sleep) || defined (__stub____sleep) _sleep_will_always_fail_with_ENOSYS(); #else _sleep(); #endif #if defined (__stub_lseek) || defined (__stub___lseek) lseek_will_always_fail_with_ENOSYS(); #else lseek(); #endif #if defined (__stub_usleep) || defined (__stub___usleep) usleep_will_always_fail_with_ENOSYS(); #else usleep(); #endif #if defined (__stub_dlclose) || defined (__stub___dlclose) dlclose_will_always_fail_with_ENOSYS(); #else dlclose(); #endif #if defined (__stub_gethostname) || defined (__stub___gethostname) gethostname_will_always_fail_with_ENOSYS(); #else gethostname(); #endif #if defined (__stub_clock) || defined (__stub___clock) clock_will_always_fail_with_ENOSYS(); #else clock(); #endif #if defined (__stub_access) || defined (__stub___access) access_will_always_fail_with_ENOSYS(); #else access(); #endif #if defined (__stub__snprintf) || defined (__stub____snprintf) _snprintf_will_always_fail_with_ENOSYS(); #else _snprintf(); #endif #if defined (__stub_dlerror) || defined (__stub___dlerror) dlerror_will_always_fail_with_ENOSYS(); #else dlerror(); #endif #if defined (__stub_fork) || defined (__stub___fork) fork_will_always_fail_with_ENOSYS(); #else fork(); #endif #if defined (__stub_getpagesize) || defined (__stub___getpagesize) getpagesize_will_always_fail_with_ENOSYS(); #else getpagesize(); #endif #if defined (__stub_sbreak) || defined (__stub___sbreak) sbreak_will_always_fail_with_ENOSYS(); #else sbreak(); #endif #if defined (__stub_memalign) || defined (__stub___memalign) memalign_will_always_fail_with_ENOSYS(); #else memalign(); #endif #if defined (__stub_getcwd) || defined (__stub___getcwd) getcwd_will_always_fail_with_ENOSYS(); #else getcwd(); #endif #if defined (__stub_gethostbyname) || defined (__stub___gethostbyname) gethostbyname_will_always_fail_with_ENOSYS(); #else gethostbyname(); #endif #if defined (__stub_readlink) || defined (__stub___readlink) readlink_will_always_fail_with_ENOSYS(); #else readlink(); #endif #if defined (__stub__set_output_format) || defined (__stub____set_output_format) _set_output_format_will_always_fail_with_ENOSYS(); #else _set_output_format(); #endif #if defined (__stub_PXFGETARG) || defined (__stub___PXFGETARG) PXFGETARG_will_always_fail_with_ENOSYS(); #else PXFGETARG(); #endif #if defined (__stub_strcasecmp) || defined (__stub___strcasecmp) strcasecmp_will_always_fail_with_ENOSYS(); #else strcasecmp(); #endif #if defined (__stub_dlopen) || defined (__stub___dlopen) dlopen_will_always_fail_with_ENOSYS(); #else dlopen(); #endif #if defined (__stub_drand48) || defined (__stub___drand48) drand48_will_always_fail_with_ENOSYS(); #else drand48(); #endif #if defined (__stub_socket) || defined (__stub___socket) socket_will_always_fail_with_ENOSYS(); #else socket(); #endif #if defined (__stub_popen) || defined (__stub___popen) popen_will_always_fail_with_ENOSYS(); #else popen(); #endif #if defined (__stub_getrusage) || defined (__stub___getrusage) getrusage_will_always_fail_with_ENOSYS(); #else getrusage(); #endif #if defined (__stub__mkdir) || defined (__stub____mkdir) _mkdir_will_always_fail_with_ENOSYS(); #else _mkdir(); #endif #if defined (__stub_time) || defined (__stub___time) time_will_always_fail_with_ENOSYS(); #else time(); #endif #if defined (__stub_stricmp) || defined (__stub___stricmp) stricmp_will_always_fail_with_ENOSYS(); #else stricmp(); #endif ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o stdout: conftest.obj : error LNK2019: unresolved external symbol getdomainname referenced in function main conftest.obj : error LNK2019: unresolved external symbol snprintf referenced in function main conftest.obj : error LNK2019: unresolved external symbol realpath referenced in function main conftest.obj : error LNK2019: unresolved external symbol dlsym referenced in function main conftest.obj : error LNK2019: unresolved external symbol bzero referenced in function main conftest.obj : error LNK2019: unresolved external symbol getwd referenced in function main conftest.obj : error LNK2019: unresolved external symbol uname referenced in function main conftest.obj : error LNK2019: unresolved external symbol sleep referenced in function main conftest.obj : error LNK2019: unresolved external symbol usleep referenced in function main conftest.obj : error LNK2019: unresolved external symbol dlclose referenced in function main conftest.obj : error LNK2019: unresolved external symbol gethostname referenced in function main conftest.obj : error LNK2019: unresolved external symbol dlerror referenced in function main conftest.obj : error LNK2019: unresolved external symbol fork referenced in function main conftest.obj : error LNK2019: unresolved external symbol getpagesize referenced in function main conftest.obj : error LNK2019: unresolved external symbol sbreak referenced in function main conftest.obj : error LNK2019: unresolved external symbol memalign referenced in function main conftest.obj : error LNK2019: unresolved external symbol gethostbyname referenced in function main conftest.obj : error LNK2019: unresolved external symbol readlink referenced in function main conftest.obj : error LNK2019: unresolved external symbol PXFGETARG referenced in function main conftest.obj : error LNK2019: unresolved external symbol strcasecmp referenced in function main conftest.obj : error LNK2019: unresolved external symbol dlopen referenced in function main conftest.obj : error LNK2019: unresolved external symbol drand48 referenced in function main conftest.obj : error LNK2019: unresolved external symbol socket referenced in function main conftest.obj : error LNK2019: unresolved external symbol popen referenced in function main conftest.obj : error LNK2019: unresolved external symbol getrusage referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 25 unresolved externals Possible ERROR while running linker: exit code 96 stdout: conftest.obj : error LNK2019: unresolved external symbol getdomainname referenced in function main conftest.obj : error LNK2019: unresolved external symbol snprintf referenced in function main conftest.obj : error LNK2019: unresolved external symbol realpath referenced in function main conftest.obj : error LNK2019: unresolved external symbol dlsym referenced in function main conftest.obj : error LNK2019: unresolved external symbol bzero referenced in function main conftest.obj : error LNK2019: unresolved external symbol getwd referenced in function main conftest.obj : error LNK2019: unresolved external symbol uname referenced in function main conftest.obj : error LNK2019: unresolved external symbol sleep referenced in function main conftest.obj : error LNK2019: unresolved external symbol usleep referenced in function main conftest.obj : error LNK2019: unresolved external symbol dlclose referenced in function main conftest.obj : error LNK2019: unresolved external symbol gethostname referenced in function main conftest.obj : error LNK2019: unresolved external symbol dlerror referenced in function main conftest.obj : error LNK2019: unresolved external symbol fork referenced in function main conftest.obj : error LNK2019: unresolved external symbol getpagesize referenced in function main conftest.obj : error LNK2019: unresolved external symbol sbreak referenced in function main conftest.obj : error LNK2019: unresolved external symbol memalign referenced in function main conftest.obj : error LNK2019: unresolved external symbol gethostbyname referenced in function main conftest.obj : error LNK2019: unresolved external symbol readlink referenced in function main conftest.obj : error LNK2019: unresolved external symbol PXFGETARG referenced in function main conftest.obj : error LNK2019: unresolved external symbol strcasecmp referenced in function main conftest.obj : error LNK2019: unresolved external symbol dlopen referenced in function main conftest.obj : error LNK2019: unresolved external symbol drand48 referenced in function main conftest.obj : error LNK2019: unresolved external symbol socket referenced in function main conftest.obj : error LNK2019: unresolved external symbol popen referenced in function main conftest.obj : error LNK2019: unresolved external symbol getrusage referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 25 unresolved externalsChecking for functions [rand getdomainname _access snprintf realpath dlsym bzero _getcwd getwd uname _lseek sleep _sleep lseek usleep dlclose gethostname clock access] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char rand(); char getdomainname(); char _access(); char snprintf(); char realpath(); char dlsym(); char bzero(); char _getcwd(); char getwd(); char uname(); char _lseek(); char sleep(); char _sleep(); char lseek(); char usleep(); char dlclose(); char gethostname(); char clock(); char access(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_rand) || defined (__stub___rand) rand_will_always_fail_with_ENOSYS(); #else rand(); #endif #if defined (__stub_getdomainname) || defined (__stub___getdomainname) getdomainname_will_always_fail_with_ENOSYS(); #else getdomainname(); #endif #if defined (__stub__access) || defined (__stub____access) _access_will_always_fail_with_ENOSYS(); #else _access(); #endif #if defined (__stub_snprintf) || defined (__stub___snprintf) snprintf_will_always_fail_with_ENOSYS(); #else snprintf(); #endif #if defined (__stub_realpath) || defined (__stub___realpath) realpath_will_always_fail_with_ENOSYS(); #else realpath(); #endif #if defined (__stub_dlsym) || defined (__stub___dlsym) dlsym_will_always_fail_with_ENOSYS(); #else dlsym(); #endif #if defined (__stub_bzero) || defined (__stub___bzero) bzero_will_always_fail_with_ENOSYS(); #else bzero(); #endif #if defined (__stub__getcwd) || defined (__stub____getcwd) _getcwd_will_always_fail_with_ENOSYS(); #else _getcwd(); #endif #if defined (__stub_getwd) || defined (__stub___getwd) getwd_will_always_fail_with_ENOSYS(); #else getwd(); #endif #if defined (__stub_uname) || defined (__stub___uname) uname_will_always_fail_with_ENOSYS(); #else uname(); #endif #if defined (__stub__lseek) || defined (__stub____lseek) _lseek_will_always_fail_with_ENOSYS(); #else _lseek(); #endif #if defined (__stub_sleep) || defined (__stub___sleep) sleep_will_always_fail_with_ENOSYS(); #else sleep(); #endif #if defined (__stub__sleep) || defined (__stub____sleep) _sleep_will_always_fail_with_ENOSYS(); #else _sleep(); #endif #if defined (__stub_lseek) || defined (__stub___lseek) lseek_will_always_fail_with_ENOSYS(); #else lseek(); #endif #if defined (__stub_usleep) || defined (__stub___usleep) usleep_will_always_fail_with_ENOSYS(); #else usleep(); #endif #if defined (__stub_dlclose) || defined (__stub___dlclose) dlclose_will_always_fail_with_ENOSYS(); #else dlclose(); #endif #if defined (__stub_gethostname) || defined (__stub___gethostname) gethostname_will_always_fail_with_ENOSYS(); #else gethostname(); #endif #if defined (__stub_clock) || defined (__stub___clock) clock_will_always_fail_with_ENOSYS(); #else clock(); #endif #if defined (__stub_access) || defined (__stub___access) access_will_always_fail_with_ENOSYS(); #else access(); #endif ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o stdout: conftest.obj : error LNK2019: unresolved external symbol getdomainname referenced in function main conftest.obj : error LNK2019: unresolved external symbol snprintf referenced in function main conftest.obj : error LNK2019: unresolved external symbol realpath referenced in function main conftest.obj : error LNK2019: unresolved external symbol dlsym referenced in function main conftest.obj : error LNK2019: unresolved external symbol bzero referenced in function main conftest.obj : error LNK2019: unresolved external symbol getwd referenced in function main conftest.obj : error LNK2019: unresolved external symbol uname referenced in function main conftest.obj : error LNK2019: unresolved external symbol sleep referenced in function main conftest.obj : error LNK2019: unresolved external symbol usleep referenced in function main conftest.obj : error LNK2019: unresolved external symbol dlclose referenced in function main conftest.obj : error LNK2019: unresolved external symbol gethostname referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 11 unresolved externals Possible ERROR while running linker: exit code 96 stdout: conftest.obj : error LNK2019: unresolved external symbol getdomainname referenced in function main conftest.obj : error LNK2019: unresolved external symbol snprintf referenced in function main conftest.obj : error LNK2019: unresolved external symbol realpath referenced in function main conftest.obj : error LNK2019: unresolved external symbol dlsym referenced in function main conftest.obj : error LNK2019: unresolved external symbol bzero referenced in function main conftest.obj : error LNK2019: unresolved external symbol getwd referenced in function main conftest.obj : error LNK2019: unresolved external symbol uname referenced in function main conftest.obj : error LNK2019: unresolved external symbol sleep referenced in function main conftest.obj : error LNK2019: unresolved external symbol usleep referenced in function main conftest.obj : error LNK2019: unresolved external symbol dlclose referenced in function main conftest.obj : error LNK2019: unresolved external symbol gethostname referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 11 unresolved externalsChecking for functions [rand getdomainname _access snprintf realpath dlsym bzero _getcwd getwd] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char rand(); char getdomainname(); char _access(); char snprintf(); char realpath(); char dlsym(); char bzero(); char _getcwd(); char getwd(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_rand) || defined (__stub___rand) rand_will_always_fail_with_ENOSYS(); #else rand(); #endif #if defined (__stub_getdomainname) || defined (__stub___getdomainname) getdomainname_will_always_fail_with_ENOSYS(); #else getdomainname(); #endif #if defined (__stub__access) || defined (__stub____access) _access_will_always_fail_with_ENOSYS(); #else _access(); #endif #if defined (__stub_snprintf) || defined (__stub___snprintf) snprintf_will_always_fail_with_ENOSYS(); #else snprintf(); #endif #if defined (__stub_realpath) || defined (__stub___realpath) realpath_will_always_fail_with_ENOSYS(); #else realpath(); #endif #if defined (__stub_dlsym) || defined (__stub___dlsym) dlsym_will_always_fail_with_ENOSYS(); #else dlsym(); #endif #if defined (__stub_bzero) || defined (__stub___bzero) bzero_will_always_fail_with_ENOSYS(); #else bzero(); #endif #if defined (__stub__getcwd) || defined (__stub____getcwd) _getcwd_will_always_fail_with_ENOSYS(); #else _getcwd(); #endif #if defined (__stub_getwd) || defined (__stub___getwd) getwd_will_always_fail_with_ENOSYS(); #else getwd(); #endif ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o stdout: conftest.obj : error LNK2019: unresolved external symbol getdomainname referenced in function main conftest.obj : error LNK2019: unresolved external symbol snprintf referenced in function main conftest.obj : error LNK2019: unresolved external symbol realpath referenced in function main conftest.obj : error LNK2019: unresolved external symbol dlsym referenced in function main conftest.obj : error LNK2019: unresolved external symbol bzero referenced in function main conftest.obj : error LNK2019: unresolved external symbol getwd referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 6 unresolved externals Possible ERROR while running linker: exit code 96 stdout: conftest.obj : error LNK2019: unresolved external symbol getdomainname referenced in function main conftest.obj : error LNK2019: unresolved external symbol snprintf referenced in function main conftest.obj : error LNK2019: unresolved external symbol realpath referenced in function main conftest.obj : error LNK2019: unresolved external symbol dlsym referenced in function main conftest.obj : error LNK2019: unresolved external symbol bzero referenced in function main conftest.obj : error LNK2019: unresolved external symbol getwd referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 6 unresolved externalsChecking for functions [rand getdomainname _access snprintf] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char rand(); char getdomainname(); char _access(); char snprintf(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_rand) || defined (__stub___rand) rand_will_always_fail_with_ENOSYS(); #else rand(); #endif #if defined (__stub_getdomainname) || defined (__stub___getdomainname) getdomainname_will_always_fail_with_ENOSYS(); #else getdomainname(); #endif #if defined (__stub__access) || defined (__stub____access) _access_will_always_fail_with_ENOSYS(); #else _access(); #endif #if defined (__stub_snprintf) || defined (__stub___snprintf) snprintf_will_always_fail_with_ENOSYS(); #else snprintf(); #endif ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o stdout: conftest.obj : error LNK2019: unresolved external symbol getdomainname referenced in function main conftest.obj : error LNK2019: unresolved external symbol snprintf referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 2 unresolved externals Possible ERROR while running linker: exit code 96 stdout: conftest.obj : error LNK2019: unresolved external symbol getdomainname referenced in function main conftest.obj : error LNK2019: unresolved external symbol snprintf referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 2 unresolved externalsChecking for functions [rand] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char rand(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_rand) || defined (__stub___rand) rand_will_always_fail_with_ENOSYS(); #else rand(); #endif ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o Defined "HAVE_RAND" to "1" Checking for functions [getdomainname] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char getdomainname(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_getdomainname) || defined (__stub___getdomainname) getdomainname_will_always_fail_with_ENOSYS(); #else getdomainname(); #endif ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o stdout: conftest.obj : error LNK2019: unresolved external symbol getdomainname referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: exit code 96 stdout: conftest.obj : error LNK2019: unresolved external symbol getdomainname referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 1 unresolved externalsChecking for functions [_access] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _access(); #ifdef __cplusplus } #endif int main() { #if defined (__stub__access) || defined (__stub____access) _access_will_always_fail_with_ENOSYS(); #else _access(); #endif ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o Defined "HAVE__ACCESS" to "1" Checking for functions [snprintf] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char snprintf(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_snprintf) || defined (__stub___snprintf) snprintf_will_always_fail_with_ENOSYS(); #else snprintf(); #endif ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o stdout: conftest.obj : error LNK2019: unresolved external symbol snprintf referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: exit code 96 stdout: conftest.obj : error LNK2019: unresolved external symbol snprintf referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 1 unresolved externalsChecking for functions [realpath dlsym bzero _getcwd getwd] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char realpath(); char dlsym(); char bzero(); char _getcwd(); char getwd(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_realpath) || defined (__stub___realpath) realpath_will_always_fail_with_ENOSYS(); #else realpath(); #endif #if defined (__stub_dlsym) || defined (__stub___dlsym) dlsym_will_always_fail_with_ENOSYS(); #else dlsym(); #endif #if defined (__stub_bzero) || defined (__stub___bzero) bzero_will_always_fail_with_ENOSYS(); #else bzero(); #endif #if defined (__stub__getcwd) || defined (__stub____getcwd) _getcwd_will_always_fail_with_ENOSYS(); #else _getcwd(); #endif #if defined (__stub_getwd) || defined (__stub___getwd) getwd_will_always_fail_with_ENOSYS(); #else getwd(); #endif ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o stdout: conftest.obj : error LNK2019: unresolved external symbol realpath referenced in function main conftest.obj : error LNK2019: unresolved external symbol dlsym referenced in function main conftest.obj : error LNK2019: unresolved external symbol bzero referenced in function main conftest.obj : error LNK2019: unresolved external symbol getwd referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 4 unresolved externals Possible ERROR while running linker: exit code 96 stdout: conftest.obj : error LNK2019: unresolved external symbol realpath referenced in function main conftest.obj : error LNK2019: unresolved external symbol dlsym referenced in function main conftest.obj : error LNK2019: unresolved external symbol bzero referenced in function main conftest.obj : error LNK2019: unresolved external symbol getwd referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 4 unresolved externalsChecking for functions [realpath dlsym] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char realpath(); char dlsym(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_realpath) || defined (__stub___realpath) realpath_will_always_fail_with_ENOSYS(); #else realpath(); #endif #if defined (__stub_dlsym) || defined (__stub___dlsym) dlsym_will_always_fail_with_ENOSYS(); #else dlsym(); #endif ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o stdout: conftest.obj : error LNK2019: unresolved external symbol realpath referenced in function main conftest.obj : error LNK2019: unresolved external symbol dlsym referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 2 unresolved externals Possible ERROR while running linker: exit code 96 stdout: conftest.obj : error LNK2019: unresolved external symbol realpath referenced in function main conftest.obj : error LNK2019: unresolved external symbol dlsym referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 2 unresolved externalsChecking for functions [realpath] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char realpath(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_realpath) || defined (__stub___realpath) realpath_will_always_fail_with_ENOSYS(); #else realpath(); #endif ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o stdout: conftest.obj : error LNK2019: unresolved external symbol realpath referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: exit code 96 stdout: conftest.obj : error LNK2019: unresolved external symbol realpath referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 1 unresolved externalsChecking for functions [dlsym] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char dlsym(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_dlsym) || defined (__stub___dlsym) dlsym_will_always_fail_with_ENOSYS(); #else dlsym(); #endif ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o stdout: conftest.obj : error LNK2019: unresolved external symbol dlsym referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: exit code 96 stdout: conftest.obj : error LNK2019: unresolved external symbol dlsym referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 1 unresolved externalsChecking for functions [bzero _getcwd getwd] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char bzero(); char _getcwd(); char getwd(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_bzero) || defined (__stub___bzero) bzero_will_always_fail_with_ENOSYS(); #else bzero(); #endif #if defined (__stub__getcwd) || defined (__stub____getcwd) _getcwd_will_always_fail_with_ENOSYS(); #else _getcwd(); #endif #if defined (__stub_getwd) || defined (__stub___getwd) getwd_will_always_fail_with_ENOSYS(); #else getwd(); #endif ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o stdout: conftest.obj : error LNK2019: unresolved external symbol bzero referenced in function main conftest.obj : error LNK2019: unresolved external symbol getwd referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 2 unresolved externals Possible ERROR while running linker: exit code 96 stdout: conftest.obj : error LNK2019: unresolved external symbol bzero referenced in function main conftest.obj : error LNK2019: unresolved external symbol getwd referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 2 unresolved externalsChecking for functions [bzero] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char bzero(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_bzero) || defined (__stub___bzero) bzero_will_always_fail_with_ENOSYS(); #else bzero(); #endif ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o stdout: conftest.obj : error LNK2019: unresolved external symbol bzero referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: exit code 96 stdout: conftest.obj : error LNK2019: unresolved external symbol bzero referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 1 unresolved externalsChecking for functions [_getcwd] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _getcwd(); #ifdef __cplusplus } #endif int main() { #if defined (__stub__getcwd) || defined (__stub____getcwd) _getcwd_will_always_fail_with_ENOSYS(); #else _getcwd(); #endif ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o Defined "HAVE__GETCWD" to "1" Checking for functions [getwd] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char getwd(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_getwd) || defined (__stub___getwd) getwd_will_always_fail_with_ENOSYS(); #else getwd(); #endif ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o stdout: conftest.obj : error LNK2019: unresolved external symbol getwd referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: exit code 96 stdout: conftest.obj : error LNK2019: unresolved external symbol getwd referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 1 unresolved externalsChecking for functions [uname _lseek sleep _sleep lseek usleep dlclose gethostname clock access] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char uname(); char _lseek(); char sleep(); char _sleep(); char lseek(); char usleep(); char dlclose(); char gethostname(); char clock(); char access(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_uname) || defined (__stub___uname) uname_will_always_fail_with_ENOSYS(); #else uname(); #endif #if defined (__stub__lseek) || defined (__stub____lseek) _lseek_will_always_fail_with_ENOSYS(); #else _lseek(); #endif #if defined (__stub_sleep) || defined (__stub___sleep) sleep_will_always_fail_with_ENOSYS(); #else sleep(); #endif #if defined (__stub__sleep) || defined (__stub____sleep) _sleep_will_always_fail_with_ENOSYS(); #else _sleep(); #endif #if defined (__stub_lseek) || defined (__stub___lseek) lseek_will_always_fail_with_ENOSYS(); #else lseek(); #endif #if defined (__stub_usleep) || defined (__stub___usleep) usleep_will_always_fail_with_ENOSYS(); #else usleep(); #endif #if defined (__stub_dlclose) || defined (__stub___dlclose) dlclose_will_always_fail_with_ENOSYS(); #else dlclose(); #endif #if defined (__stub_gethostname) || defined (__stub___gethostname) gethostname_will_always_fail_with_ENOSYS(); #else gethostname(); #endif #if defined (__stub_clock) || defined (__stub___clock) clock_will_always_fail_with_ENOSYS(); #else clock(); #endif #if defined (__stub_access) || defined (__stub___access) access_will_always_fail_with_ENOSYS(); #else access(); #endif ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o stdout: conftest.obj : error LNK2019: unresolved external symbol uname referenced in function main conftest.obj : error LNK2019: unresolved external symbol sleep referenced in function main conftest.obj : error LNK2019: unresolved external symbol usleep referenced in function main conftest.obj : error LNK2019: unresolved external symbol dlclose referenced in function main conftest.obj : error LNK2019: unresolved external symbol gethostname referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 5 unresolved externals Possible ERROR while running linker: exit code 96 stdout: conftest.obj : error LNK2019: unresolved external symbol uname referenced in function main conftest.obj : error LNK2019: unresolved external symbol sleep referenced in function main conftest.obj : error LNK2019: unresolved external symbol usleep referenced in function main conftest.obj : error LNK2019: unresolved external symbol dlclose referenced in function main conftest.obj : error LNK2019: unresolved external symbol gethostname referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 5 unresolved externalsChecking for functions [uname _lseek sleep _sleep lseek] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char uname(); char _lseek(); char sleep(); char _sleep(); char lseek(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_uname) || defined (__stub___uname) uname_will_always_fail_with_ENOSYS(); #else uname(); #endif #if defined (__stub__lseek) || defined (__stub____lseek) _lseek_will_always_fail_with_ENOSYS(); #else _lseek(); #endif #if defined (__stub_sleep) || defined (__stub___sleep) sleep_will_always_fail_with_ENOSYS(); #else sleep(); #endif #if defined (__stub__sleep) || defined (__stub____sleep) _sleep_will_always_fail_with_ENOSYS(); #else _sleep(); #endif #if defined (__stub_lseek) || defined (__stub___lseek) lseek_will_always_fail_with_ENOSYS(); #else lseek(); #endif ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o stdout: conftest.obj : error LNK2019: unresolved external symbol uname referenced in function main conftest.obj : error LNK2019: unresolved external symbol sleep referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 2 unresolved externals Possible ERROR while running linker: exit code 96 stdout: conftest.obj : error LNK2019: unresolved external symbol uname referenced in function main conftest.obj : error LNK2019: unresolved external symbol sleep referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 2 unresolved externalsChecking for functions [uname _lseek] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char uname(); char _lseek(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_uname) || defined (__stub___uname) uname_will_always_fail_with_ENOSYS(); #else uname(); #endif #if defined (__stub__lseek) || defined (__stub____lseek) _lseek_will_always_fail_with_ENOSYS(); #else _lseek(); #endif ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o stdout: conftest.obj : error LNK2019: unresolved external symbol uname referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: exit code 96 stdout: conftest.obj : error LNK2019: unresolved external symbol uname referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 1 unresolved externalsChecking for functions [uname] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char uname(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_uname) || defined (__stub___uname) uname_will_always_fail_with_ENOSYS(); #else uname(); #endif ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o stdout: conftest.obj : error LNK2019: unresolved external symbol uname referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: exit code 96 stdout: conftest.obj : error LNK2019: unresolved external symbol uname referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 1 unresolved externalsChecking for functions [_lseek] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _lseek(); #ifdef __cplusplus } #endif int main() { #if defined (__stub__lseek) || defined (__stub____lseek) _lseek_will_always_fail_with_ENOSYS(); #else _lseek(); #endif ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o Defined "HAVE__LSEEK" to "1" Checking for functions [sleep _sleep lseek] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char sleep(); char _sleep(); char lseek(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_sleep) || defined (__stub___sleep) sleep_will_always_fail_with_ENOSYS(); #else sleep(); #endif #if defined (__stub__sleep) || defined (__stub____sleep) _sleep_will_always_fail_with_ENOSYS(); #else _sleep(); #endif #if defined (__stub_lseek) || defined (__stub___lseek) lseek_will_always_fail_with_ENOSYS(); #else lseek(); #endif ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o stdout: conftest.obj : error LNK2019: unresolved external symbol sleep referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: exit code 96 stdout: conftest.obj : error LNK2019: unresolved external symbol sleep referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 1 unresolved externalsChecking for functions [sleep] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char sleep(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_sleep) || defined (__stub___sleep) sleep_will_always_fail_with_ENOSYS(); #else sleep(); #endif ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o stdout: conftest.obj : error LNK2019: unresolved external symbol sleep referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: exit code 96 stdout: conftest.obj : error LNK2019: unresolved external symbol sleep referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 1 unresolved externalsChecking for functions [_sleep] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _sleep(); #ifdef __cplusplus } #endif int main() { #if defined (__stub__sleep) || defined (__stub____sleep) _sleep_will_always_fail_with_ENOSYS(); #else _sleep(); #endif ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o Defined "HAVE__SLEEP" to "1" Checking for functions [lseek] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char lseek(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_lseek) || defined (__stub___lseek) lseek_will_always_fail_with_ENOSYS(); #else lseek(); #endif ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o Defined "HAVE_LSEEK" to "1" Checking for functions [usleep dlclose gethostname clock access] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char usleep(); char dlclose(); char gethostname(); char clock(); char access(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_usleep) || defined (__stub___usleep) usleep_will_always_fail_with_ENOSYS(); #else usleep(); #endif #if defined (__stub_dlclose) || defined (__stub___dlclose) dlclose_will_always_fail_with_ENOSYS(); #else dlclose(); #endif #if defined (__stub_gethostname) || defined (__stub___gethostname) gethostname_will_always_fail_with_ENOSYS(); #else gethostname(); #endif #if defined (__stub_clock) || defined (__stub___clock) clock_will_always_fail_with_ENOSYS(); #else clock(); #endif #if defined (__stub_access) || defined (__stub___access) access_will_always_fail_with_ENOSYS(); #else access(); #endif ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o stdout: conftest.obj : error LNK2019: unresolved external symbol usleep referenced in function main conftest.obj : error LNK2019: unresolved external symbol dlclose referenced in function main conftest.obj : error LNK2019: unresolved external symbol gethostname referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 3 unresolved externals Possible ERROR while running linker: exit code 96 stdout: conftest.obj : error LNK2019: unresolved external symbol usleep referenced in function main conftest.obj : error LNK2019: unresolved external symbol dlclose referenced in function main conftest.obj : error LNK2019: unresolved external symbol gethostname referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 3 unresolved externalsChecking for functions [usleep dlclose] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char usleep(); char dlclose(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_usleep) || defined (__stub___usleep) usleep_will_always_fail_with_ENOSYS(); #else usleep(); #endif #if defined (__stub_dlclose) || defined (__stub___dlclose) dlclose_will_always_fail_with_ENOSYS(); #else dlclose(); #endif ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o stdout: conftest.obj : error LNK2019: unresolved external symbol usleep referenced in function main conftest.obj : error LNK2019: unresolved external symbol dlclose referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 2 unresolved externals Possible ERROR while running linker: exit code 96 stdout: conftest.obj : error LNK2019: unresolved external symbol usleep referenced in function main conftest.obj : error LNK2019: unresolved external symbol dlclose referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 2 unresolved externalsChecking for functions [usleep] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char usleep(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_usleep) || defined (__stub___usleep) usleep_will_always_fail_with_ENOSYS(); #else usleep(); #endif ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o stdout: conftest.obj : error LNK2019: unresolved external symbol usleep referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: exit code 96 stdout: conftest.obj : error LNK2019: unresolved external symbol usleep referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 1 unresolved externalsChecking for functions [dlclose] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char dlclose(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_dlclose) || defined (__stub___dlclose) dlclose_will_always_fail_with_ENOSYS(); #else dlclose(); #endif ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o stdout: conftest.obj : error LNK2019: unresolved external symbol dlclose referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: exit code 96 stdout: conftest.obj : error LNK2019: unresolved external symbol dlclose referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 1 unresolved externalsChecking for functions [gethostname clock access] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char gethostname(); char clock(); char access(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_gethostname) || defined (__stub___gethostname) gethostname_will_always_fail_with_ENOSYS(); #else gethostname(); #endif #if defined (__stub_clock) || defined (__stub___clock) clock_will_always_fail_with_ENOSYS(); #else clock(); #endif #if defined (__stub_access) || defined (__stub___access) access_will_always_fail_with_ENOSYS(); #else access(); #endif ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o stdout: conftest.obj : error LNK2019: unresolved external symbol gethostname referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: exit code 96 stdout: conftest.obj : error LNK2019: unresolved external symbol gethostname referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 1 unresolved externalsChecking for functions [gethostname] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char gethostname(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_gethostname) || defined (__stub___gethostname) gethostname_will_always_fail_with_ENOSYS(); #else gethostname(); #endif ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o stdout: conftest.obj : error LNK2019: unresolved external symbol gethostname referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: exit code 96 stdout: conftest.obj : error LNK2019: unresolved external symbol gethostname referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 1 unresolved externalsChecking for functions [clock] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char clock(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_clock) || defined (__stub___clock) clock_will_always_fail_with_ENOSYS(); #else clock(); #endif ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o Defined "HAVE_CLOCK" to "1" Checking for functions [access] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char access(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_access) || defined (__stub___access) access_will_always_fail_with_ENOSYS(); #else access(); #endif ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o Defined "HAVE_ACCESS" to "1" Checking for functions [_snprintf dlerror fork getpagesize sbreak memalign getcwd gethostbyname readlink _set_output_format PXFGETARG strcasecmp dlopen drand48 socket popen getrusage _mkdir time stricmp] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _snprintf(); char dlerror(); char fork(); char getpagesize(); char sbreak(); char memalign(); char getcwd(); char gethostbyname(); char readlink(); char _set_output_format(); char PXFGETARG(); char strcasecmp(); char dlopen(); char drand48(); char socket(); char popen(); char getrusage(); char _mkdir(); char time(); char stricmp(); #ifdef __cplusplus } #endif int main() { #if defined (__stub__snprintf) || defined (__stub____snprintf) _snprintf_will_always_fail_with_ENOSYS(); #else _snprintf(); #endif #if defined (__stub_dlerror) || defined (__stub___dlerror) dlerror_will_always_fail_with_ENOSYS(); #else dlerror(); #endif #if defined (__stub_fork) || defined (__stub___fork) fork_will_always_fail_with_ENOSYS(); #else fork(); #endif #if defined (__stub_getpagesize) || defined (__stub___getpagesize) getpagesize_will_always_fail_with_ENOSYS(); #else getpagesize(); #endif #if defined (__stub_sbreak) || defined (__stub___sbreak) sbreak_will_always_fail_with_ENOSYS(); #else sbreak(); #endif #if defined (__stub_memalign) || defined (__stub___memalign) memalign_will_always_fail_with_ENOSYS(); #else memalign(); #endif #if defined (__stub_getcwd) || defined (__stub___getcwd) getcwd_will_always_fail_with_ENOSYS(); #else getcwd(); #endif #if defined (__stub_gethostbyname) || defined (__stub___gethostbyname) gethostbyname_will_always_fail_with_ENOSYS(); #else gethostbyname(); #endif #if defined (__stub_readlink) || defined (__stub___readlink) readlink_will_always_fail_with_ENOSYS(); #else readlink(); #endif #if defined (__stub__set_output_format) || defined (__stub____set_output_format) _set_output_format_will_always_fail_with_ENOSYS(); #else _set_output_format(); #endif #if defined (__stub_PXFGETARG) || defined (__stub___PXFGETARG) PXFGETARG_will_always_fail_with_ENOSYS(); #else PXFGETARG(); #endif #if defined (__stub_strcasecmp) || defined (__stub___strcasecmp) strcasecmp_will_always_fail_with_ENOSYS(); #else strcasecmp(); #endif #if defined (__stub_dlopen) || defined (__stub___dlopen) dlopen_will_always_fail_with_ENOSYS(); #else dlopen(); #endif #if defined (__stub_drand48) || defined (__stub___drand48) drand48_will_always_fail_with_ENOSYS(); #else drand48(); #endif #if defined (__stub_socket) || defined (__stub___socket) socket_will_always_fail_with_ENOSYS(); #else socket(); #endif #if defined (__stub_popen) || defined (__stub___popen) popen_will_always_fail_with_ENOSYS(); #else popen(); #endif #if defined (__stub_getrusage) || defined (__stub___getrusage) getrusage_will_always_fail_with_ENOSYS(); #else getrusage(); #endif #if defined (__stub__mkdir) || defined (__stub____mkdir) _mkdir_will_always_fail_with_ENOSYS(); #else _mkdir(); #endif #if defined (__stub_time) || defined (__stub___time) time_will_always_fail_with_ENOSYS(); #else time(); #endif #if defined (__stub_stricmp) || defined (__stub___stricmp) stricmp_will_always_fail_with_ENOSYS(); #else stricmp(); #endif ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o stdout: conftest.obj : error LNK2019: unresolved external symbol dlerror referenced in function main conftest.obj : error LNK2019: unresolved external symbol fork referenced in function main conftest.obj : error LNK2019: unresolved external symbol getpagesize referenced in function main conftest.obj : error LNK2019: unresolved external symbol sbreak referenced in function main conftest.obj : error LNK2019: unresolved external symbol memalign referenced in function main conftest.obj : error LNK2019: unresolved external symbol gethostbyname referenced in function main conftest.obj : error LNK2019: unresolved external symbol readlink referenced in function main conftest.obj : error LNK2019: unresolved external symbol PXFGETARG referenced in function main conftest.obj : error LNK2019: unresolved external symbol strcasecmp referenced in function main conftest.obj : error LNK2019: unresolved external symbol dlopen referenced in function main conftest.obj : error LNK2019: unresolved external symbol drand48 referenced in function main conftest.obj : error LNK2019: unresolved external symbol socket referenced in function main conftest.obj : error LNK2019: unresolved external symbol popen referenced in function main conftest.obj : error LNK2019: unresolved external symbol getrusage referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 14 unresolved externals Possible ERROR while running linker: exit code 96 stdout: conftest.obj : error LNK2019: unresolved external symbol dlerror referenced in function main conftest.obj : error LNK2019: unresolved external symbol fork referenced in function main conftest.obj : error LNK2019: unresolved external symbol getpagesize referenced in function main conftest.obj : error LNK2019: unresolved external symbol sbreak referenced in function main conftest.obj : error LNK2019: unresolved external symbol memalign referenced in function main conftest.obj : error LNK2019: unresolved external symbol gethostbyname referenced in function main conftest.obj : error LNK2019: unresolved external symbol readlink referenced in function main conftest.obj : error LNK2019: unresolved external symbol PXFGETARG referenced in function main conftest.obj : error LNK2019: unresolved external symbol strcasecmp referenced in function main conftest.obj : error LNK2019: unresolved external symbol dlopen referenced in function main conftest.obj : error LNK2019: unresolved external symbol drand48 referenced in function main conftest.obj : error LNK2019: unresolved external symbol socket referenced in function main conftest.obj : error LNK2019: unresolved external symbol popen referenced in function main conftest.obj : error LNK2019: unresolved external symbol getrusage referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 14 unresolved externalsChecking for functions [_snprintf dlerror fork getpagesize sbreak memalign getcwd gethostbyname readlink _set_output_format] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _snprintf(); char dlerror(); char fork(); char getpagesize(); char sbreak(); char memalign(); char getcwd(); char gethostbyname(); char readlink(); char _set_output_format(); #ifdef __cplusplus } #endif int main() { #if defined (__stub__snprintf) || defined (__stub____snprintf) _snprintf_will_always_fail_with_ENOSYS(); #else _snprintf(); #endif #if defined (__stub_dlerror) || defined (__stub___dlerror) dlerror_will_always_fail_with_ENOSYS(); #else dlerror(); #endif #if defined (__stub_fork) || defined (__stub___fork) fork_will_always_fail_with_ENOSYS(); #else fork(); #endif #if defined (__stub_getpagesize) || defined (__stub___getpagesize) getpagesize_will_always_fail_with_ENOSYS(); #else getpagesize(); #endif #if defined (__stub_sbreak) || defined (__stub___sbreak) sbreak_will_always_fail_with_ENOSYS(); #else sbreak(); #endif #if defined (__stub_memalign) || defined (__stub___memalign) memalign_will_always_fail_with_ENOSYS(); #else memalign(); #endif #if defined (__stub_getcwd) || defined (__stub___getcwd) getcwd_will_always_fail_with_ENOSYS(); #else getcwd(); #endif #if defined (__stub_gethostbyname) || defined (__stub___gethostbyname) gethostbyname_will_always_fail_with_ENOSYS(); #else gethostbyname(); #endif #if defined (__stub_readlink) || defined (__stub___readlink) readlink_will_always_fail_with_ENOSYS(); #else readlink(); #endif #if defined (__stub__set_output_format) || defined (__stub____set_output_format) _set_output_format_will_always_fail_with_ENOSYS(); #else _set_output_format(); #endif ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o stdout: conftest.obj : error LNK2019: unresolved external symbol dlerror referenced in function main conftest.obj : error LNK2019: unresolved external symbol fork referenced in function main conftest.obj : error LNK2019: unresolved external symbol getpagesize referenced in function main conftest.obj : error LNK2019: unresolved external symbol sbreak referenced in function main conftest.obj : error LNK2019: unresolved external symbol memalign referenced in function main conftest.obj : error LNK2019: unresolved external symbol gethostbyname referenced in function main conftest.obj : error LNK2019: unresolved external symbol readlink referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 7 unresolved externals Possible ERROR while running linker: exit code 96 stdout: conftest.obj : error LNK2019: unresolved external symbol dlerror referenced in function main conftest.obj : error LNK2019: unresolved external symbol fork referenced in function main conftest.obj : error LNK2019: unresolved external symbol getpagesize referenced in function main conftest.obj : error LNK2019: unresolved external symbol sbreak referenced in function main conftest.obj : error LNK2019: unresolved external symbol memalign referenced in function main conftest.obj : error LNK2019: unresolved external symbol gethostbyname referenced in function main conftest.obj : error LNK2019: unresolved external symbol readlink referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 7 unresolved externalsChecking for functions [_snprintf dlerror fork getpagesize sbreak] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _snprintf(); char dlerror(); char fork(); char getpagesize(); char sbreak(); #ifdef __cplusplus } #endif int main() { #if defined (__stub__snprintf) || defined (__stub____snprintf) _snprintf_will_always_fail_with_ENOSYS(); #else _snprintf(); #endif #if defined (__stub_dlerror) || defined (__stub___dlerror) dlerror_will_always_fail_with_ENOSYS(); #else dlerror(); #endif #if defined (__stub_fork) || defined (__stub___fork) fork_will_always_fail_with_ENOSYS(); #else fork(); #endif #if defined (__stub_getpagesize) || defined (__stub___getpagesize) getpagesize_will_always_fail_with_ENOSYS(); #else getpagesize(); #endif #if defined (__stub_sbreak) || defined (__stub___sbreak) sbreak_will_always_fail_with_ENOSYS(); #else sbreak(); #endif ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o stdout: conftest.obj : error LNK2019: unresolved external symbol dlerror referenced in function main conftest.obj : error LNK2019: unresolved external symbol fork referenced in function main conftest.obj : error LNK2019: unresolved external symbol getpagesize referenced in function main conftest.obj : error LNK2019: unresolved external symbol sbreak referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 4 unresolved externals Possible ERROR while running linker: exit code 96 stdout: conftest.obj : error LNK2019: unresolved external symbol dlerror referenced in function main conftest.obj : error LNK2019: unresolved external symbol fork referenced in function main conftest.obj : error LNK2019: unresolved external symbol getpagesize referenced in function main conftest.obj : error LNK2019: unresolved external symbol sbreak referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 4 unresolved externalsChecking for functions [_snprintf dlerror] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _snprintf(); char dlerror(); #ifdef __cplusplus } #endif int main() { #if defined (__stub__snprintf) || defined (__stub____snprintf) _snprintf_will_always_fail_with_ENOSYS(); #else _snprintf(); #endif #if defined (__stub_dlerror) || defined (__stub___dlerror) dlerror_will_always_fail_with_ENOSYS(); #else dlerror(); #endif ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o stdout: conftest.obj : error LNK2019: unresolved external symbol dlerror referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: exit code 96 stdout: conftest.obj : error LNK2019: unresolved external symbol dlerror referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 1 unresolved externalsChecking for functions [_snprintf] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _snprintf(); #ifdef __cplusplus } #endif int main() { #if defined (__stub__snprintf) || defined (__stub____snprintf) _snprintf_will_always_fail_with_ENOSYS(); #else _snprintf(); #endif ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o Defined "HAVE__SNPRINTF" to "1" Checking for functions [dlerror] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char dlerror(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_dlerror) || defined (__stub___dlerror) dlerror_will_always_fail_with_ENOSYS(); #else dlerror(); #endif ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o stdout: conftest.obj : error LNK2019: unresolved external symbol dlerror referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: exit code 96 stdout: conftest.obj : error LNK2019: unresolved external symbol dlerror referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 1 unresolved externalsChecking for functions [fork getpagesize sbreak] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char fork(); char getpagesize(); char sbreak(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_fork) || defined (__stub___fork) fork_will_always_fail_with_ENOSYS(); #else fork(); #endif #if defined (__stub_getpagesize) || defined (__stub___getpagesize) getpagesize_will_always_fail_with_ENOSYS(); #else getpagesize(); #endif #if defined (__stub_sbreak) || defined (__stub___sbreak) sbreak_will_always_fail_with_ENOSYS(); #else sbreak(); #endif ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o stdout: conftest.obj : error LNK2019: unresolved external symbol fork referenced in function main conftest.obj : error LNK2019: unresolved external symbol getpagesize referenced in function main conftest.obj : error LNK2019: unresolved external symbol sbreak referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 3 unresolved externals Possible ERROR while running linker: exit code 96 stdout: conftest.obj : error LNK2019: unresolved external symbol fork referenced in function main conftest.obj : error LNK2019: unresolved external symbol getpagesize referenced in function main conftest.obj : error LNK2019: unresolved external symbol sbreak referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 3 unresolved externalsChecking for functions [fork] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char fork(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_fork) || defined (__stub___fork) fork_will_always_fail_with_ENOSYS(); #else fork(); #endif ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o stdout: conftest.obj : error LNK2019: unresolved external symbol fork referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: exit code 96 stdout: conftest.obj : error LNK2019: unresolved external symbol fork referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 1 unresolved externalsChecking for functions [getpagesize] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char getpagesize(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_getpagesize) || defined (__stub___getpagesize) getpagesize_will_always_fail_with_ENOSYS(); #else getpagesize(); #endif ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o stdout: conftest.obj : error LNK2019: unresolved external symbol getpagesize referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: exit code 96 stdout: conftest.obj : error LNK2019: unresolved external symbol getpagesize referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 1 unresolved externalsChecking for functions [sbreak] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char sbreak(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_sbreak) || defined (__stub___sbreak) sbreak_will_always_fail_with_ENOSYS(); #else sbreak(); #endif ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o stdout: conftest.obj : error LNK2019: unresolved external symbol sbreak referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: exit code 96 stdout: conftest.obj : error LNK2019: unresolved external symbol sbreak referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 1 unresolved externalsChecking for functions [memalign getcwd gethostbyname readlink _set_output_format] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char memalign(); char getcwd(); char gethostbyname(); char readlink(); char _set_output_format(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_memalign) || defined (__stub___memalign) memalign_will_always_fail_with_ENOSYS(); #else memalign(); #endif #if defined (__stub_getcwd) || defined (__stub___getcwd) getcwd_will_always_fail_with_ENOSYS(); #else getcwd(); #endif #if defined (__stub_gethostbyname) || defined (__stub___gethostbyname) gethostbyname_will_always_fail_with_ENOSYS(); #else gethostbyname(); #endif #if defined (__stub_readlink) || defined (__stub___readlink) readlink_will_always_fail_with_ENOSYS(); #else readlink(); #endif #if defined (__stub__set_output_format) || defined (__stub____set_output_format) _set_output_format_will_always_fail_with_ENOSYS(); #else _set_output_format(); #endif ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o stdout: conftest.obj : error LNK2019: unresolved external symbol memalign referenced in function main conftest.obj : error LNK2019: unresolved external symbol gethostbyname referenced in function main conftest.obj : error LNK2019: unresolved external symbol readlink referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 3 unresolved externals Possible ERROR while running linker: exit code 96 stdout: conftest.obj : error LNK2019: unresolved external symbol memalign referenced in function main conftest.obj : error LNK2019: unresolved external symbol gethostbyname referenced in function main conftest.obj : error LNK2019: unresolved external symbol readlink referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 3 unresolved externalsChecking for functions [memalign getcwd] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char memalign(); char getcwd(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_memalign) || defined (__stub___memalign) memalign_will_always_fail_with_ENOSYS(); #else memalign(); #endif #if defined (__stub_getcwd) || defined (__stub___getcwd) getcwd_will_always_fail_with_ENOSYS(); #else getcwd(); #endif ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o stdout: conftest.obj : error LNK2019: unresolved external symbol memalign referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: exit code 96 stdout: conftest.obj : error LNK2019: unresolved external symbol memalign referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 1 unresolved externalsChecking for functions [memalign] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char memalign(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_memalign) || defined (__stub___memalign) memalign_will_always_fail_with_ENOSYS(); #else memalign(); #endif ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o stdout: conftest.obj : error LNK2019: unresolved external symbol memalign referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: exit code 96 stdout: conftest.obj : error LNK2019: unresolved external symbol memalign referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 1 unresolved externalsChecking for functions [getcwd] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char getcwd(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_getcwd) || defined (__stub___getcwd) getcwd_will_always_fail_with_ENOSYS(); #else getcwd(); #endif ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o Defined "HAVE_GETCWD" to "1" Checking for functions [gethostbyname readlink _set_output_format] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char gethostbyname(); char readlink(); char _set_output_format(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_gethostbyname) || defined (__stub___gethostbyname) gethostbyname_will_always_fail_with_ENOSYS(); #else gethostbyname(); #endif #if defined (__stub_readlink) || defined (__stub___readlink) readlink_will_always_fail_with_ENOSYS(); #else readlink(); #endif #if defined (__stub__set_output_format) || defined (__stub____set_output_format) _set_output_format_will_always_fail_with_ENOSYS(); #else _set_output_format(); #endif ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o stdout: conftest.obj : error LNK2019: unresolved external symbol gethostbyname referenced in function main conftest.obj : error LNK2019: unresolved external symbol readlink referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 2 unresolved externals Possible ERROR while running linker: exit code 96 stdout: conftest.obj : error LNK2019: unresolved external symbol gethostbyname referenced in function main conftest.obj : error LNK2019: unresolved external symbol readlink referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 2 unresolved externalsChecking for functions [gethostbyname] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char gethostbyname(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_gethostbyname) || defined (__stub___gethostbyname) gethostbyname_will_always_fail_with_ENOSYS(); #else gethostbyname(); #endif ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o stdout: conftest.obj : error LNK2019: unresolved external symbol gethostbyname referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: exit code 96 stdout: conftest.obj : error LNK2019: unresolved external symbol gethostbyname referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 1 unresolved externalsChecking for functions [readlink] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char readlink(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_readlink) || defined (__stub___readlink) readlink_will_always_fail_with_ENOSYS(); #else readlink(); #endif ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o stdout: conftest.obj : error LNK2019: unresolved external symbol readlink referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: exit code 96 stdout: conftest.obj : error LNK2019: unresolved external symbol readlink referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 1 unresolved externalsChecking for functions [_set_output_format] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _set_output_format(); #ifdef __cplusplus } #endif int main() { #if defined (__stub__set_output_format) || defined (__stub____set_output_format) _set_output_format_will_always_fail_with_ENOSYS(); #else _set_output_format(); #endif ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o Defined "HAVE__SET_OUTPUT_FORMAT" to "1" Checking for functions [PXFGETARG strcasecmp dlopen drand48 socket popen getrusage _mkdir time stricmp] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char PXFGETARG(); char strcasecmp(); char dlopen(); char drand48(); char socket(); char popen(); char getrusage(); char _mkdir(); char time(); char stricmp(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_PXFGETARG) || defined (__stub___PXFGETARG) PXFGETARG_will_always_fail_with_ENOSYS(); #else PXFGETARG(); #endif #if defined (__stub_strcasecmp) || defined (__stub___strcasecmp) strcasecmp_will_always_fail_with_ENOSYS(); #else strcasecmp(); #endif #if defined (__stub_dlopen) || defined (__stub___dlopen) dlopen_will_always_fail_with_ENOSYS(); #else dlopen(); #endif #if defined (__stub_drand48) || defined (__stub___drand48) drand48_will_always_fail_with_ENOSYS(); #else drand48(); #endif #if defined (__stub_socket) || defined (__stub___socket) socket_will_always_fail_with_ENOSYS(); #else socket(); #endif #if defined (__stub_popen) || defined (__stub___popen) popen_will_always_fail_with_ENOSYS(); #else popen(); #endif #if defined (__stub_getrusage) || defined (__stub___getrusage) getrusage_will_always_fail_with_ENOSYS(); #else getrusage(); #endif #if defined (__stub__mkdir) || defined (__stub____mkdir) _mkdir_will_always_fail_with_ENOSYS(); #else _mkdir(); #endif #if defined (__stub_time) || defined (__stub___time) time_will_always_fail_with_ENOSYS(); #else time(); #endif #if defined (__stub_stricmp) || defined (__stub___stricmp) stricmp_will_always_fail_with_ENOSYS(); #else stricmp(); #endif ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o stdout: conftest.obj : error LNK2019: unresolved external symbol PXFGETARG referenced in function main conftest.obj : error LNK2019: unresolved external symbol strcasecmp referenced in function main conftest.obj : error LNK2019: unresolved external symbol dlopen referenced in function main conftest.obj : error LNK2019: unresolved external symbol drand48 referenced in function main conftest.obj : error LNK2019: unresolved external symbol socket referenced in function main conftest.obj : error LNK2019: unresolved external symbol popen referenced in function main conftest.obj : error LNK2019: unresolved external symbol getrusage referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 7 unresolved externals Possible ERROR while running linker: exit code 96 stdout: conftest.obj : error LNK2019: unresolved external symbol PXFGETARG referenced in function main conftest.obj : error LNK2019: unresolved external symbol strcasecmp referenced in function main conftest.obj : error LNK2019: unresolved external symbol dlopen referenced in function main conftest.obj : error LNK2019: unresolved external symbol drand48 referenced in function main conftest.obj : error LNK2019: unresolved external symbol socket referenced in function main conftest.obj : error LNK2019: unresolved external symbol popen referenced in function main conftest.obj : error LNK2019: unresolved external symbol getrusage referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 7 unresolved externalsChecking for functions [PXFGETARG strcasecmp dlopen drand48 socket] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char PXFGETARG(); char strcasecmp(); char dlopen(); char drand48(); char socket(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_PXFGETARG) || defined (__stub___PXFGETARG) PXFGETARG_will_always_fail_with_ENOSYS(); #else PXFGETARG(); #endif #if defined (__stub_strcasecmp) || defined (__stub___strcasecmp) strcasecmp_will_always_fail_with_ENOSYS(); #else strcasecmp(); #endif #if defined (__stub_dlopen) || defined (__stub___dlopen) dlopen_will_always_fail_with_ENOSYS(); #else dlopen(); #endif #if defined (__stub_drand48) || defined (__stub___drand48) drand48_will_always_fail_with_ENOSYS(); #else drand48(); #endif #if defined (__stub_socket) || defined (__stub___socket) socket_will_always_fail_with_ENOSYS(); #else socket(); #endif ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o stdout: conftest.obj : error LNK2019: unresolved external symbol PXFGETARG referenced in function main conftest.obj : error LNK2019: unresolved external symbol strcasecmp referenced in function main conftest.obj : error LNK2019: unresolved external symbol dlopen referenced in function main conftest.obj : error LNK2019: unresolved external symbol drand48 referenced in function main conftest.obj : error LNK2019: unresolved external symbol socket referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 5 unresolved externals Possible ERROR while running linker: exit code 96 stdout: conftest.obj : error LNK2019: unresolved external symbol PXFGETARG referenced in function main conftest.obj : error LNK2019: unresolved external symbol strcasecmp referenced in function main conftest.obj : error LNK2019: unresolved external symbol dlopen referenced in function main conftest.obj : error LNK2019: unresolved external symbol drand48 referenced in function main conftest.obj : error LNK2019: unresolved external symbol socket referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 5 unresolved externalsChecking for functions [PXFGETARG strcasecmp] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char PXFGETARG(); char strcasecmp(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_PXFGETARG) || defined (__stub___PXFGETARG) PXFGETARG_will_always_fail_with_ENOSYS(); #else PXFGETARG(); #endif #if defined (__stub_strcasecmp) || defined (__stub___strcasecmp) strcasecmp_will_always_fail_with_ENOSYS(); #else strcasecmp(); #endif ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o stdout: conftest.obj : error LNK2019: unresolved external symbol PXFGETARG referenced in function main conftest.obj : error LNK2019: unresolved external symbol strcasecmp referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 2 unresolved externals Possible ERROR while running linker: exit code 96 stdout: conftest.obj : error LNK2019: unresolved external symbol PXFGETARG referenced in function main conftest.obj : error LNK2019: unresolved external symbol strcasecmp referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 2 unresolved externalsChecking for functions [PXFGETARG] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char PXFGETARG(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_PXFGETARG) || defined (__stub___PXFGETARG) PXFGETARG_will_always_fail_with_ENOSYS(); #else PXFGETARG(); #endif ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o stdout: conftest.obj : error LNK2019: unresolved external symbol PXFGETARG referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: exit code 96 stdout: conftest.obj : error LNK2019: unresolved external symbol PXFGETARG referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 1 unresolved externalsChecking for functions [strcasecmp] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char strcasecmp(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_strcasecmp) || defined (__stub___strcasecmp) strcasecmp_will_always_fail_with_ENOSYS(); #else strcasecmp(); #endif ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o stdout: conftest.obj : error LNK2019: unresolved external symbol strcasecmp referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: exit code 96 stdout: conftest.obj : error LNK2019: unresolved external symbol strcasecmp referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 1 unresolved externalsChecking for functions [dlopen drand48 socket] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char dlopen(); char drand48(); char socket(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_dlopen) || defined (__stub___dlopen) dlopen_will_always_fail_with_ENOSYS(); #else dlopen(); #endif #if defined (__stub_drand48) || defined (__stub___drand48) drand48_will_always_fail_with_ENOSYS(); #else drand48(); #endif #if defined (__stub_socket) || defined (__stub___socket) socket_will_always_fail_with_ENOSYS(); #else socket(); #endif ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o stdout: conftest.obj : error LNK2019: unresolved external symbol dlopen referenced in function main conftest.obj : error LNK2019: unresolved external symbol drand48 referenced in function main conftest.obj : error LNK2019: unresolved external symbol socket referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 3 unresolved externals Possible ERROR while running linker: exit code 96 stdout: conftest.obj : error LNK2019: unresolved external symbol dlopen referenced in function main conftest.obj : error LNK2019: unresolved external symbol drand48 referenced in function main conftest.obj : error LNK2019: unresolved external symbol socket referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 3 unresolved externalsChecking for functions [dlopen] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char dlopen(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_dlopen) || defined (__stub___dlopen) dlopen_will_always_fail_with_ENOSYS(); #else dlopen(); #endif ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o stdout: conftest.obj : error LNK2019: unresolved external symbol dlopen referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: exit code 96 stdout: conftest.obj : error LNK2019: unresolved external symbol dlopen referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 1 unresolved externalsChecking for functions [drand48] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char drand48(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_drand48) || defined (__stub___drand48) drand48_will_always_fail_with_ENOSYS(); #else drand48(); #endif ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o stdout: conftest.obj : error LNK2019: unresolved external symbol drand48 referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: exit code 96 stdout: conftest.obj : error LNK2019: unresolved external symbol drand48 referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 1 unresolved externalsChecking for functions [socket] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char socket(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_socket) || defined (__stub___socket) socket_will_always_fail_with_ENOSYS(); #else socket(); #endif ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o stdout: conftest.obj : error LNK2019: unresolved external symbol socket referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: exit code 96 stdout: conftest.obj : error LNK2019: unresolved external symbol socket referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 1 unresolved externalsChecking for functions [popen getrusage _mkdir time stricmp] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char popen(); char getrusage(); char _mkdir(); char time(); char stricmp(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_popen) || defined (__stub___popen) popen_will_always_fail_with_ENOSYS(); #else popen(); #endif #if defined (__stub_getrusage) || defined (__stub___getrusage) getrusage_will_always_fail_with_ENOSYS(); #else getrusage(); #endif #if defined (__stub__mkdir) || defined (__stub____mkdir) _mkdir_will_always_fail_with_ENOSYS(); #else _mkdir(); #endif #if defined (__stub_time) || defined (__stub___time) time_will_always_fail_with_ENOSYS(); #else time(); #endif #if defined (__stub_stricmp) || defined (__stub___stricmp) stricmp_will_always_fail_with_ENOSYS(); #else stricmp(); #endif ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o stdout: conftest.obj : error LNK2019: unresolved external symbol popen referenced in function main conftest.obj : error LNK2019: unresolved external symbol getrusage referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 2 unresolved externals Possible ERROR while running linker: exit code 96 stdout: conftest.obj : error LNK2019: unresolved external symbol popen referenced in function main conftest.obj : error LNK2019: unresolved external symbol getrusage referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 2 unresolved externalsChecking for functions [popen getrusage] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char popen(); char getrusage(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_popen) || defined (__stub___popen) popen_will_always_fail_with_ENOSYS(); #else popen(); #endif #if defined (__stub_getrusage) || defined (__stub___getrusage) getrusage_will_always_fail_with_ENOSYS(); #else getrusage(); #endif ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o stdout: conftest.obj : error LNK2019: unresolved external symbol popen referenced in function main conftest.obj : error LNK2019: unresolved external symbol getrusage referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 2 unresolved externals Possible ERROR while running linker: exit code 96 stdout: conftest.obj : error LNK2019: unresolved external symbol popen referenced in function main conftest.obj : error LNK2019: unresolved external symbol getrusage referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 2 unresolved externalsChecking for functions [popen] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char popen(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_popen) || defined (__stub___popen) popen_will_always_fail_with_ENOSYS(); #else popen(); #endif ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o stdout: conftest.obj : error LNK2019: unresolved external symbol popen referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: exit code 96 stdout: conftest.obj : error LNK2019: unresolved external symbol popen referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 1 unresolved externalsChecking for functions [getrusage] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char getrusage(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_getrusage) || defined (__stub___getrusage) getrusage_will_always_fail_with_ENOSYS(); #else getrusage(); #endif ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o stdout: conftest.obj : error LNK2019: unresolved external symbol getrusage referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: exit code 96 stdout: conftest.obj : error LNK2019: unresolved external symbol getrusage referenced in function main C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.exe : fatal error LNK1120: 1 unresolved externalsChecking for functions [_mkdir time stricmp] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _mkdir(); char time(); char stricmp(); #ifdef __cplusplus } #endif int main() { #if defined (__stub__mkdir) || defined (__stub____mkdir) _mkdir_will_always_fail_with_ENOSYS(); #else _mkdir(); #endif #if defined (__stub_time) || defined (__stub___time) time_will_always_fail_with_ENOSYS(); #else time(); #endif #if defined (__stub_stricmp) || defined (__stub___stricmp) stricmp_will_always_fail_with_ENOSYS(); #else stricmp(); #endif ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o Defined "HAVE__MKDIR" to "1" Defined "HAVE_TIME" to "1" Defined "HAVE_STRICMP" to "1" ================================================================================ TEST checkMmap from config.functions(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/functions.py:179) TESTING: checkMmap from config.functions(config/BuildSystem/config/functions.py:179) Check for functional mmap() to allocate shared memory and define HAVE_MMAP Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions/conftest.c stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.c(3): catastrophic error: cannot open source file "sys/mman.h" #include ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.c (code 4) Possible ERROR while running compiler: exit code 4 stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.c(3): catastrophic error: cannot open source file "sys/mman.h" #include ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FUN\conftest.c (code 4)Source: #include "confdefs.h" #include "conffix.h" #include #include #include #include int main() { int fd; fd=open("/tmp/file",O_RDWR); mmap((void*)0,100,PROT_READ|PROT_WRITE,MAP_SHARED,fd,0); ; return 0; } Compile failed inside link child config.functions 284.596649 ================================================================================ TEST configureMemorySize from config.utilities.getResidentSetSize(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/utilities/getResidentSetSize.py:31) TESTING: configureMemorySize from config.utilities.getResidentSetSize(config/BuildSystem/config/utilities/getResidentSetSize.py:31) Try to determine how to measure the memory usage Defined "USE_PROC_FOR_SIZE" to "1" Using /proc for PetscMemoryGetCurrentUsage() child config.utilities.getResidentSetSize 0.006986 ================================================================================ TEST configureFortranCommandLine from config.utilities.fortranCommandLine(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/utilities/fortranCommandLine.py:27) TESTING: configureFortranCommandLine from config.utilities.fortranCommandLine(config/BuildSystem/config/utilities/fortranCommandLine.py:27) Check for the mechanism to retrieve command line arguments in Fortran Checking for functions [] in library [''] [] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe ifort -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilersFortran -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -MT -O3 -fpp /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries/conftest.F90 Successful compile: Source: program main integer i character*(80) arg i = command_argument_count() call get_command_argument(i,arg) end Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe ifort -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries/conftest.exe -MT -O3 -fpp /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries/conftest.o Defined "HAVE_FORTRAN_GET_COMMAND_ARGUMENT" to "1" child config.utilities.fortranCommandLine 3.660044 ================================================================================ TEST configureFeatureTestMacros from config.utilities.featureTestMacros(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/utilities/featureTestMacros.py:13) TESTING: configureFeatureTestMacros from config.utilities.featureTestMacros(config/BuildSystem/config/utilities/featureTestMacros.py:13) Checks if certain feature test macros are support All intermediate test results are stored in /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.featureTestMacros Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.featureTestMacros/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.featureTestMacros -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.featureTestMacros/conftest.c stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FEA\conftest.c(4): catastrophic error: cannot open source file "sysctl.h" #include ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FEA\conftest.c (code 4) Possible ERROR while running compiler: exit code 4 stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FEA\conftest.c(4): catastrophic error: cannot open source file "sysctl.h" #include ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FEA\conftest.c (code 4)Source: #include "confdefs.h" #include "conffix.h" #define _POSIX_C_SOURCE 200112L #include int main() { ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.featureTestMacros/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.featureTestMacros -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.featureTestMacros/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #define _BSD_SOURCE #include int main() { ; return 0; } Defined "_BSD_SOURCE" to "1" Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.featureTestMacros/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.featureTestMacros -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.featureTestMacros/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #define _DEFAULT_SOURCE #include int main() { ; return 0; } Defined "_DEFAULT_SOURCE" to "1" Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.featureTestMacros/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.featureTestMacros -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.featureTestMacros/conftest.c stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FEA\conftest.c(4): catastrophic error: cannot open source file "sched.h" #include ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FEA\conftest.c (code 4) Possible ERROR while running compiler: exit code 4 stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FEA\conftest.c(4): catastrophic error: cannot open source file "sched.h" #include ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.FEA\conftest.c (code 4)Source: #include "confdefs.h" #include "conffix.h" #define _GNU_SOURCE #include int main() { cpu_set_t mset; CPU_ZERO(&mset);; return 0; } child config.utilities.featureTestMacros 10.483108 ================================================================================ TEST configureMissingUtypeTypedefs from config.utilities.missing(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/utilities/missing.py:55) TESTING: configureMissingUtypeTypedefs from config.utilities.missing(config/BuildSystem/config/utilities/missing.py:55) Checks if u_short is undefined All intermediate test results are stored in /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.featureTestMacros -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing/conftest.c stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c(6): error: identifier "u_short" is undefined u_short foo; ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c (code 2) Possible ERROR while running compiler: exit code 2 stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c(6): error: identifier "u_short" is undefined u_short foo; ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c (code 2)Source: #include "confdefs.h" #include "conffix.h" #include int main() { u_short foo; ; return 0; } Defined "NEEDS_UTYPE_TYPEDEFS" to "1" ================================================================================ TEST configureMissingFunctions from config.utilities.missing(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/utilities/missing.py:61) TESTING: configureMissingFunctions from config.utilities.missing(config/BuildSystem/config/utilities/missing.py:61) Checks for SOCKETS Checking for functions [socket] in library ['Ws2_32.lib'] [] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.featureTestMacros -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_socket() { socket(0,0,0);; } int main() { _check_socket();; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries/conftest.o Ws2_32.lib Defined "HAVE_LIBWS2_32" to "1" Adding ['Ws2_32.lib'] to LIBS Defined "HAVE_WINSOCK2_H" to "1" Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.featureTestMacros -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { closesocket(0); return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing/conftest.o Ws2_32.lib Defined "HAVE_CLOSESOCKET" to "1" Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.featureTestMacros -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { WSAGetLastError(); return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing/conftest.o Ws2_32.lib Defined "HAVE_WSAGETLASTERROR" to "1" ================================================================================ TEST configureMissingSignals from config.utilities.missing(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/utilities/missing.py:79) TESTING: configureMissingSignals from config.utilities.missing(config/BuildSystem/config/utilities/missing.py:79) Check for missing signals, and define MISSING_ if necessary Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.featureTestMacros -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGABRT; if (i); ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.featureTestMacros -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing/conftest.c stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c(6): error: identifier "SIGALRM" is undefined int i=SIGALRM; ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c (code 2) Possible ERROR while running compiler: exit code 2 stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c(6): error: identifier "SIGALRM" is undefined int i=SIGALRM; ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c (code 2)Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGALRM; if (i); ; return 0; } Defined "MISSING_SIGALRM" to "1" Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.featureTestMacros -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing/conftest.c stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c(6): error: identifier "SIGBUS" is undefined int i=SIGBUS; ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c (code 2) Possible ERROR while running compiler: exit code 2 stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c(6): error: identifier "SIGBUS" is undefined int i=SIGBUS; ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c (code 2)Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGBUS; if (i); ; return 0; } Defined "MISSING_SIGBUS" to "1" Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.featureTestMacros -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing/conftest.c stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c(6): error: identifier "SIGCHLD" is undefined int i=SIGCHLD; ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c (code 2) Possible ERROR while running compiler: exit code 2 stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c(6): error: identifier "SIGCHLD" is undefined int i=SIGCHLD; ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c (code 2)Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGCHLD; if (i); ; return 0; } Defined "MISSING_SIGCHLD" to "1" Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.featureTestMacros -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing/conftest.c stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c(6): error: identifier "SIGCONT" is undefined int i=SIGCONT; ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c (code 2) Possible ERROR while running compiler: exit code 2 stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c(6): error: identifier "SIGCONT" is undefined int i=SIGCONT; ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c (code 2)Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGCONT; if (i); ; return 0; } Defined "MISSING_SIGCONT" to "1" Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.featureTestMacros -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGFPE; if (i); ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.featureTestMacros -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing/conftest.c stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c(6): error: identifier "SIGHUP" is undefined int i=SIGHUP; ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c (code 2) Possible ERROR while running compiler: exit code 2 stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c(6): error: identifier "SIGHUP" is undefined int i=SIGHUP; ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c (code 2)Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGHUP; if (i); ; return 0; } Defined "MISSING_SIGHUP" to "1" Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.featureTestMacros -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGILL; if (i); ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.featureTestMacros -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGINT; if (i); ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.featureTestMacros -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing/conftest.c stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c(6): error: identifier "SIGKILL" is undefined int i=SIGKILL; ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c (code 2) Possible ERROR while running compiler: exit code 2 stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c(6): error: identifier "SIGKILL" is undefined int i=SIGKILL; ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c (code 2)Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGKILL; if (i); ; return 0; } Defined "MISSING_SIGKILL" to "1" Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.featureTestMacros -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing/conftest.c stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c(6): error: identifier "SIGPIPE" is undefined int i=SIGPIPE; ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c (code 2) Possible ERROR while running compiler: exit code 2 stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c(6): error: identifier "SIGPIPE" is undefined int i=SIGPIPE; ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c (code 2)Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGPIPE; if (i); ; return 0; } Defined "MISSING_SIGPIPE" to "1" Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.featureTestMacros -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing/conftest.c stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c(6): error: identifier "SIGQUIT" is undefined int i=SIGQUIT; ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c (code 2) Possible ERROR while running compiler: exit code 2 stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c(6): error: identifier "SIGQUIT" is undefined int i=SIGQUIT; ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c (code 2)Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGQUIT; if (i); ; return 0; } Defined "MISSING_SIGQUIT" to "1" Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.featureTestMacros -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGSEGV; if (i); ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.featureTestMacros -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing/conftest.c stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c(6): error: identifier "SIGSTOP" is undefined int i=SIGSTOP; ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c (code 2) Possible ERROR while running compiler: exit code 2 stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c(6): error: identifier "SIGSTOP" is undefined int i=SIGSTOP; ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c (code 2)Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGSTOP; if (i); ; return 0; } Defined "MISSING_SIGSTOP" to "1" Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.featureTestMacros -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing/conftest.c stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c(6): error: identifier "SIGSYS" is undefined int i=SIGSYS; ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c (code 2) Possible ERROR while running compiler: exit code 2 stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c(6): error: identifier "SIGSYS" is undefined int i=SIGSYS; ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c (code 2)Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGSYS; if (i); ; return 0; } Defined "MISSING_SIGSYS" to "1" Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.featureTestMacros -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGTERM; if (i); ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.featureTestMacros -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing/conftest.c stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c(6): error: identifier "SIGTRAP" is undefined int i=SIGTRAP; ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c (code 2) Possible ERROR while running compiler: exit code 2 stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c(6): error: identifier "SIGTRAP" is undefined int i=SIGTRAP; ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c (code 2)Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGTRAP; if (i); ; return 0; } Defined "MISSING_SIGTRAP" to "1" Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.featureTestMacros -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing/conftest.c stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c(6): error: identifier "SIGTSTP" is undefined int i=SIGTSTP; ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c (code 2) Possible ERROR while running compiler: exit code 2 stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c(6): error: identifier "SIGTSTP" is undefined int i=SIGTSTP; ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c (code 2)Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGTSTP; if (i); ; return 0; } Defined "MISSING_SIGTSTP" to "1" Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.featureTestMacros -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing/conftest.c stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c(6): error: identifier "SIGURG" is undefined int i=SIGURG; ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c (code 2) Possible ERROR while running compiler: exit code 2 stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c(6): error: identifier "SIGURG" is undefined int i=SIGURG; ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c (code 2)Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGURG; if (i); ; return 0; } Defined "MISSING_SIGURG" to "1" Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.featureTestMacros -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing/conftest.c stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c(6): error: identifier "SIGUSR1" is undefined int i=SIGUSR1; ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c (code 2) Possible ERROR while running compiler: exit code 2 stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c(6): error: identifier "SIGUSR1" is undefined int i=SIGUSR1; ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c (code 2)Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGUSR1; if (i); ; return 0; } Defined "MISSING_SIGUSR1" to "1" Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.featureTestMacros -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing/conftest.c stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c(6): error: identifier "SIGUSR2" is undefined int i=SIGUSR2; ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c (code 2) Possible ERROR while running compiler: exit code 2 stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c(6): error: identifier "SIGUSR2" is undefined int i=SIGUSR2; ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c (code 2)Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGUSR2; if (i); ; return 0; } Defined "MISSING_SIGUSR2" to "1" ================================================================================ TEST configureMissingGetdomainnamePrototype from config.utilities.missing(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/utilities/missing.py:96) TESTING: configureMissingGetdomainnamePrototype from config.utilities.missing(config/BuildSystem/config/utilities/missing.py:96) Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.featureTestMacros -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing/conftest.c stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c(21): error: identifier "getdomainname" is undefined int (*getdomainname_ptr)(char*,size_t) = getdomainname; ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c (code 2) Possible ERROR while running compiler: exit code 2 stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c(21): error: identifier "getdomainname" is undefined int (*getdomainname_ptr)(char*,size_t) = getdomainname; ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c (code 2)Source: #include "confdefs.h" #include "conffix.h" #if !defined(_BSD_SOURCE) #define _BSD_SOURCE #endif #if !defined(_DEFAULT_SOURCE) #define _DEFAULT_SOURCE #endif #ifdef PETSC_HAVE_UNISTD_H #include #endif #ifdef PETSC_HAVE_NETDB_H #include #endif int main() { int (*getdomainname_ptr)(char*,size_t) = getdomainname; char test[10]; if (getdomainname_ptr(test,10)) return 1; ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.featureTestMacros -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing/conftest.c stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c(21): error: identifier "getdomainname" is undefined int (*getdomainname_ptr)(char*,int) = getdomainname; ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c (code 2) Possible ERROR while running compiler: exit code 2 stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c(21): error: identifier "getdomainname" is undefined int (*getdomainname_ptr)(char*,int) = getdomainname; ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c (code 2)Source: #include "confdefs.h" #include "conffix.h" #if !defined(_BSD_SOURCE) #define _BSD_SOURCE #endif #if !defined(_DEFAULT_SOURCE) #define _DEFAULT_SOURCE #endif #ifdef PETSC_HAVE_UNISTD_H #include #endif #ifdef PETSC_HAVE_NETDB_H #include #endif int main() { int (*getdomainname_ptr)(char*,int) = getdomainname; char test[10]; if (getdomainname_ptr(test,10)) return 1; ; return 0; } Added prototype #include int getdomainname(char *, size_t); to language C Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing -MT -GR -EHsc -O3 -TP /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing/conftest.cc stdout: conftest.cc C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.cc(21): error: identifier "getdomainname" is undefined int (*getdomainname_ptr)(char*,size_t) = getdomainname; ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.cc (code 2) Possible ERROR while running compiler: exit code 2 stdout: conftest.cc C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.cc(21): error: identifier "getdomainname" is undefined int (*getdomainname_ptr)(char*,size_t) = getdomainname; ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.cc (code 2)Source: #include "confdefs.h" #include "conffix.h" #if !defined(_BSD_SOURCE) #define _BSD_SOURCE #endif #if !defined(_DEFAULT_SOURCE) #define _DEFAULT_SOURCE #endif #ifdef PETSC_HAVE_UNISTD_H #include #endif #ifdef PETSC_HAVE_NETDB_H #include #endif int main() { int (*getdomainname_ptr)(char*,size_t) = getdomainname; char test[10]; if (getdomainname_ptr(test,10)) return 1; ; return 0; } Compile failed inside link Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing -MT -GR -EHsc -O3 -TP /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing/conftest.cc stdout: conftest.cc C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.cc(21): error: identifier "getdomainname" is undefined int (*getdomainname_ptr)(char*,int) = getdomainname; ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.cc (code 2) Possible ERROR while running compiler: exit code 2 stdout: conftest.cc C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.cc(21): error: identifier "getdomainname" is undefined int (*getdomainname_ptr)(char*,int) = getdomainname; ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.cc (code 2)Source: #include "confdefs.h" #include "conffix.h" #if !defined(_BSD_SOURCE) #define _BSD_SOURCE #endif #if !defined(_DEFAULT_SOURCE) #define _DEFAULT_SOURCE #endif #ifdef PETSC_HAVE_UNISTD_H #include #endif #ifdef PETSC_HAVE_NETDB_H #include #endif int main() { int (*getdomainname_ptr)(char*,int) = getdomainname; char test[10]; if (getdomainname_ptr(test,10)) return 1; ; return 0; } Compile failed inside link Added prototype #include int getdomainname(char *, size_t); to language extern C ================================================================================ TEST configureMissingSrandPrototype from config.utilities.missing(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/utilities/missing.py:121) TESTING: configureMissingSrandPrototype from config.utilities.missing(config/BuildSystem/config/utilities/missing.py:121) Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.featureTestMacros -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing/conftest.c stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c(16): error: identifier "drand48" is undefined double (*drand48_ptr)(void) = drand48; ^ C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c(17): error: identifier "srand48" is undefined void (*srand48_ptr)(long int) = srand48; ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c (code 2) Possible ERROR while running compiler: exit code 2 stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c(16): error: identifier "drand48" is undefined double (*drand48_ptr)(void) = drand48; ^ C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c(17): error: identifier "srand48" is undefined void (*srand48_ptr)(long int) = srand48; ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.c (code 2)Source: #include "confdefs.h" #include "conffix.h" #if !defined(_BSD_SOURCE) #define _BSD_SOURCE #endif #if !defined(_DEFAULT_SOURCE) #define _DEFAULT_SOURCE #endif #include int main() { double (*drand48_ptr)(void) = drand48; void (*srand48_ptr)(long int) = srand48; long int seed=10; srand48_ptr(seed); if (drand48_ptr() > 0.5) return 1; ; return 0; } Added prototype double drand48(void); to language C Added prototype void srand48(long int); to language C Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing -MT -GR -EHsc -O3 -TP /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing/conftest.cc stdout: conftest.cc C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.cc(16): error: identifier "drand48" is undefined double (*drand48_ptr)(void) = drand48; ^ C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.cc(17): error: identifier "srand48" is undefined void (*srand48_ptr)(long int) = srand48; ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.cc (code 2) Possible ERROR while running compiler: exit code 2 stdout: conftest.cc C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.cc(16): error: identifier "drand48" is undefined double (*drand48_ptr)(void) = drand48; ^ C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.cc(17): error: identifier "srand48" is undefined void (*srand48_ptr)(long int) = srand48; ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.MIS\conftest.cc (code 2)Source: #include "confdefs.h" #include "conffix.h" #if !defined(_BSD_SOURCE) #define _BSD_SOURCE #endif #if !defined(_DEFAULT_SOURCE) #define _DEFAULT_SOURCE #endif #include int main() { double (*drand48_ptr)(void) = drand48; void (*srand48_ptr)(long int) = srand48; long int seed=10; srand48_ptr(seed); if (drand48_ptr() > 0.5) return 1; ; return 0; } Compile failed inside link Added prototype double drand48(void); to language extern C Added prototype void srand48(long int); to language extern C child config.utilities.missing 89.728705 ================================================================================ TEST configureFPTrap from config.utilities.FPTrap(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/utilities/FPTrap.py:27) TESTING: configureFPTrap from config.utilities.FPTrap(config/BuildSystem/config/utilities/FPTrap.py:27) Checking the handling of floating point traps Checking for header: sigfpe.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: conftest.c #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\confdefs.h" #line 2 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conffix.h" typedef int int32_t; typedef int mode_t; typedef int pid_t; #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\stddef.h" #pragma once #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 27 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 39 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 53 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #pragma once #line 188 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 197 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 209 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 216 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 232 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 333 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 360 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 505 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 512 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 549 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 585 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 605 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 612 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #pragma region Input Buffer SAL 1 compatibility macros #line 1016 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 1300 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 1391 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 1399 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 1419 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #pragma endregion Input Buffer SAL 1 compatibility macros #line 1564 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 1620 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 1672 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 2067 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 2081 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 2103 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 2111 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 2387 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 2644 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 2855 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 2878 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 2888 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 2898 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 2911 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 2919 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 2931 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 2965 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\ConcurrencySal.h" #pragma once #line 265 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\ConcurrencySal.h" #line 286 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\ConcurrencySal.h" #line 305 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\ConcurrencySal.h" #line 331 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\ConcurrencySal.h" #line 344 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\ConcurrencySal.h" #line 2991 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 68 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #pragma pack(push,8) #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\vadefs.h" #pragma once #pragma pack(push,8) #line 45 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\vadefs.h" typedef unsigned __int64 uintptr_t; typedef char * va_list; #line 80 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\vadefs.h" #line 117 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\vadefs.h" extern void __cdecl __va_start(va_list *, ...); #line 127 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\vadefs.h" #line 139 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\vadefs.h" #pragma pack(pop) #line 75 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 103 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 116 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 130 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 162 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 178 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 186 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 193 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 205 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 213 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 223 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 235 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 243 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 290 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 304 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 324 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 345 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 368 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 388 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 400 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 417 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 428 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 439 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 453 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 463 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 473 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 491 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" typedef unsigned __int64 size_t; typedef size_t rsize_t; typedef __int64 intptr_t; #line 525 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" typedef __int64 ptrdiff_t; typedef unsigned short wchar_t; typedef unsigned short wint_t; typedef unsigned short wctype_t; #line 554 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" typedef int errno_t; typedef long __time32_t; typedef __int64 __time64_t; typedef __time64_t time_t; #line 593 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 607 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 625 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" void __cdecl _invalid_parameter_noinfo(void); __declspec(noreturn) void __cdecl _invalid_parameter_noinfo_noreturn(void); __declspec(noreturn) void __cdecl _invoke_watson( const wchar_t *, const wchar_t *, const wchar_t *, unsigned int, uintptr_t); #line 689 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 844 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 857 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 1926 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" struct threadlocaleinfostruct; struct threadmbcinfostruct; typedef struct threadlocaleinfostruct * pthreadlocinfo; typedef struct threadmbcinfostruct * pthreadmbcinfo; struct __lc_time_data; typedef struct localeinfo_struct { pthreadloC:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.HEA\conftest.c(3): error #2379: cannot open source file "sigfpe.h" #include ^ cinfo locinfo; pthreadmbcinfo mbcinfo; } _locale_tstruct, *_locale_t; typedef struct localerefcount { char *locale; wchar_t *wlocale; int *refcount; int *wrefcount; } locrefcount; typedef struct threadlocaleinfostruct { int refcount; unsigned int lc_codepage; unsigned int lc_collate_cp; unsigned int lc_time_cp; locrefcount lc_category[6]; int lc_clike; int mb_cur_max; int * lconv_intl_refcount; int * lconv_num_refcount; int * lconv_mon_refcount; struct lconv * lconv; int * ctype1_refcount; unsigned short * ctype1; const unsigned short * pctype; const unsigned char * pclmap; const unsigned char * pcumap; struct __lc_time_data * lc_time_curr; wchar_t * locale_name[6]; } threadlocinfo; #line 2143 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #pragma pack(pop) #line 21 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\stddef.h" #line 34 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\stddef.h" extern int * __cdecl _errno(void); errno_t __cdecl _set_errno( int _Value); errno_t __cdecl _get_errno( int * _Value); #line 60 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\stddef.h" extern unsigned long __cdecl __threadid(void); extern uintptr_t __cdecl __threadhandle(void); #line 16 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conffix.h" int getdomainname(char *, size_t); double drand48(void); void srand48(long int); #line 3 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:: Preprocess stderr after filtering:: Checking for header: fpxcp.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: conftest.c #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\confdefs.h" #line 2 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conffix.h" typedef int int32_t; typedef int mode_t; typedef int pid_t; #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\stddef.h" #pragma once #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 27 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 39 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 53 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #pragma once #line 188 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 197 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 209 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 216 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 232 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 333 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 360 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 505 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 512 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 549 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 585 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 605 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 612 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #pragma region Input Buffer SAL 1 compatibility macros #line 1016 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 1300 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 1391 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 1399 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 1419 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #pragma endregion Input Buffer SAL 1 compatibility macros #line 1564 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 1620 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 1672 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 2067 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 2081 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 2103 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 2111 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 2387 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 2644 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 2855 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 2878 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 2888 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 2898 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 2911 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 2919 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 2931 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 2965 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\ConcurrencySal.h" #pragma once #line 265 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\ConcurrencySal.h" #line 286 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\ConcurrencySal.h" #line 305 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\ConcurrencySal.h" #line 331 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\ConcurrencySal.h" #line 344 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\ConcurrencySal.h" #line 2991 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 68 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #pragma pack(push,8) #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\vadefs.h" #pragma once #pragma pack(push,8) #line 45 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\vadefs.h" typedef unsigned __int64 uintptr_t; typedef char * va_list; #line 80 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\vadefs.h" #line 117 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\vadefs.h" extern void __cdecl __va_start(va_list *, ...); #line 127 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\vadefs.h" #line 139 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\vadefs.h" #pragma pack(pop) #line 75 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 103 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 116 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 130 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 162 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 178 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 186 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 193 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 205 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 213 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 223 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 235 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 243 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 290 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 304 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 324 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 345 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 368 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 388 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 400 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 417 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 428 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 439 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 453 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 463 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 473 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 491 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" typedef unsigned __int64 size_t; typedef size_t rsize_t; typedef __int64 intptr_t; #line 525 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" typedef __int64 ptrdiff_t; typedef unsigned short wchar_t; typedef unsigned short wint_t; typedef unsigned short wctype_t; #line 554 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" typedef int errno_t; typedef long __time32_t; typedef __int64 __time64_t; typedef __time64_t time_t; #line 593 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 607 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 625 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" void __cdecl _invalid_parameter_noinfo(void); __declspec(noreturn) void __cdecl _invalid_parameter_noinfo_noreturn(void); __declspec(noreturn) void __cdecl _invoke_watson( const wchar_t *, const wchar_t *, const wchar_t *, unsigned int, uintptr_t); #line 689 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 844 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 857 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 1926 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" struct threadlocaleinfostruct; struct threadmbcinfostruct; typedef struct threadlocaleinfostruct * pthreadlocinfo; typedef struct threadmbcinfostruct * pthreadmbcinfo; struct __lc_time_data; typedef struct localeinfo_struct { pthreadloC:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.HEA\conftest.c(3): error #2379: cannot open source file "fpxcp.h" #include ^ cinfo locinfo; pthreadmbcinfo mbcinfo; } _locale_tstruct, *_locale_t; typedef struct localerefcount { char *locale; wchar_t *wlocale; int *refcount; int *wrefcount; } locrefcount; typedef struct threadlocaleinfostruct { int refcount; unsigned int lc_codepage; unsigned int lc_collate_cp; unsigned int lc_time_cp; locrefcount lc_category[6]; int lc_clike; int mb_cur_max; int * lconv_intl_refcount; int * lconv_num_refcount; int * lconv_mon_refcount; struct lconv * lconv; int * ctype1_refcount; unsigned short * ctype1; const unsigned short * pctype; const unsigned char * pclmap; const unsigned char * pcumap; struct __lc_time_data * lc_time_curr; wchar_t * locale_name[6]; } threadlocinfo; #line 2143 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #pragma pack(pop) #line 21 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\stddef.h" #line 34 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\stddef.h" extern int * __cdecl _errno(void); errno_t __cdecl _set_errno( int _Value); errno_t __cdecl _get_errno( int * _Value); #line 60 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\stddef.h" extern unsigned long __cdecl __threadid(void); extern uintptr_t __cdecl __threadhandle(void); #line 16 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conffix.h" int getdomainname(char *, size_t); double drand48(void); void srand48(long int); #line 3 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:: Preprocess stderr after filtering:: Checking for header: floatingpoint.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -E -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: conftest.c #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\confdefs.h" #line 2 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" #line 1 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conffix.h" typedef int int32_t; typedef int mode_t; typedef int pid_t; #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\stddef.h" #pragma once #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 27 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 39 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 53 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #pragma once #line 188 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 197 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 209 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 216 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 232 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 333 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 360 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 505 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 512 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 549 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 585 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 605 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 612 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #pragma region Input Buffer SAL 1 compatibility macros #line 1016 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 1300 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 1391 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 1399 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 1419 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #pragma endregion Input Buffer SAL 1 compatibility macros #line 1564 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 1620 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 1672 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 2067 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 2081 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 2103 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 2111 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 2387 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 2644 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 2855 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 2878 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 2888 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 2898 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 2911 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 2919 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 2931 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 2965 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\ConcurrencySal.h" #pragma once #line 265 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\ConcurrencySal.h" #line 286 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\ConcurrencySal.h" #line 305 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\ConcurrencySal.h" #line 331 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\ConcurrencySal.h" #line 344 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\ConcurrencySal.h" #line 2991 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\sal.h" #line 68 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #pragma pack(push,8) #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\vadefs.h" #pragma once #pragma pack(push,8) #line 45 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\vadefs.h" typedef unsigned __int64 uintptr_t; typedef char * va_list; #line 80 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\vadefs.h" #line 117 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\vadefs.h" extern void __cdecl __va_start(va_list *, ...); #line 127 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\vadefs.h" #line 139 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\vadefs.h" #pragma pack(pop) #line 75 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 103 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 116 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 130 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 162 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 178 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 186 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 193 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 205 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 213 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 223 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 235 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 243 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 290 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 304 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 324 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 345 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 368 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 388 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 400 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 417 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 428 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 439 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 453 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 463 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 473 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 491 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" typedef unsigned __int64 size_t; typedef size_t rsize_t; typedef __int64 intptr_t; #line 525 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" typedef __int64 ptrdiff_t; typedef unsigned short wchar_t; typedef unsigned short wint_t; typedef unsigned short wctype_t; #line 554 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" typedef int errno_t; typedef long __time32_t; typedef __int64 __time64_t; typedef __time64_t time_t; #line 593 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 607 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 625 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" void __cdecl _invalid_parameter_noinfo(void); __declspec(noreturn) void __cdecl _invalid_parameter_noinfo_noreturn(void); __declspec(noreturn) void __cdecl _invoke_watson( const wchar_t *, const wchar_t *, const wchar_t *, unsigned int, uintptr_t); #line 689 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 844 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 857 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #line 1926 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" struct threadlocaleinfostruct; struct threadmbcinfostruct; typedef struct threadlocaleinfostruct * pthreadlocinfo; typedef struct threadmbcinfostruct * pthreadmbcinfo; struct __lc_time_data; typedef struct localeinfo_struct { pthreadloC:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.HEA\conftest.c(3): error #2379: cannot open source file "floatingpoint.h" #include ^ cinfo locinfo; pthreadmbcinfo mbcinfo; } _locale_tstruct, *_locale_t; typedef struct localerefcount { char *locale; wchar_t *wlocale; int *refcount; int *wrefcount; } locrefcount; typedef struct threadlocaleinfostruct { int refcount; unsigned int lc_codepage; unsigned int lc_collate_cp; unsigned int lc_time_cp; locrefcount lc_category[6]; int lc_clike; int mb_cur_max; int * lconv_intl_refcount; int * lconv_num_refcount; int * lconv_mon_refcount; struct lconv * lconv; int * ctype1_refcount; unsigned short * ctype1; const unsigned short * pctype; const unsigned char * pclmap; const unsigned char * pcumap; struct __lc_time_data * lc_time_curr; wchar_t * locale_name[6]; } threadlocinfo; #line 2143 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\crtdefs.h" #pragma pack(pop) #line 21 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\stddef.h" #line 34 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\stddef.h" extern int * __cdecl _errno(void); errno_t __cdecl _set_errno( int _Value); errno_t __cdecl _get_errno( int * _Value); #line 60 "C:\\Program Files (x86)\\Microsoft Visual Studio 12.0\\VC\\INCLUDE\\stddef.h" extern unsigned long __cdecl __threadid(void); extern uintptr_t __cdecl __threadhandle(void); #line 16 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conffix.h" int getdomainname(char *, size_t); double drand48(void); void srand48(long int); #line 3 "C:\\Users\\qlu\\AppData\\Local\\Temp\\PE3463~1\\CONFIG~1.HEA\\conftest.c" Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:: Preprocess stderr after filtering:: child config.utilities.FPTrap 4.323362 ================================================================================ TEST configureScalarType from PETSc.options.scalarTypes(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/PETSc/options/scalarTypes.py:40) TESTING: configureScalarType from PETSc.options.scalarTypes(config/PETSc/options/scalarTypes.py:40) Choose between real and complex numbers Scalar type is real All intermediate test results are stored in /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/PETSc.options.scalarTypes Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/PETSc.options.scalarTypes/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.featureTestMacros -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/PETSc.options.scalarTypes -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/PETSc.options.scalarTypes/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { double b = 2.0; int a = isnormal(b); ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/PETSc.options.scalarTypes/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/PETSc.options.scalarTypes/conftest.o Ws2_32.lib Defined "HAVE_ISNORMAL" to "1" Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/PETSc.options.scalarTypes/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.featureTestMacros -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/PETSc.options.scalarTypes -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/PETSc.options.scalarTypes/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { double b = 2.0; int a = isnan(b); ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/PETSc.options.scalarTypes/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/PETSc.options.scalarTypes/conftest.o Ws2_32.lib Defined "HAVE_ISNAN" to "1" Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/PETSc.options.scalarTypes/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.featureTestMacros -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/PETSc.options.scalarTypes -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/PETSc.options.scalarTypes/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { double b = 2.0; int a = isinf(b); ; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/PETSc.options.scalarTypes/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/PETSc.options.scalarTypes/conftest.o Ws2_32.lib Defined "HAVE_ISINF" to "1" ================================================================================ TEST configurePrecision from PETSc.options.scalarTypes(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/PETSc/options/scalarTypes.py:81) TESTING: configurePrecision from PETSc.options.scalarTypes(config/PETSc/options/scalarTypes.py:81) Set the default real number precision for PETSc objects Checking C compiler works with __float128 Checking for functions [logq] in library ['quadmath'] [] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.featureTestMacros -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/PETSc.options.scalarTypes -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries/conftest.c stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.LIB\conftest.c(4): catastrophic error: cannot open source file "quadmath.h" #include ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.LIB\conftest.c (code 4) Possible ERROR while running compiler: exit code 4 stdout: conftest.c C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.LIB\conftest.c(4): catastrophic error: cannot open source file "quadmath.h" #include ^ compilation aborted for C:\Users\qlu\AppData\Local\Temp\PE3463~1\CONFIG~1.LIB\conftest.c (code 4)Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_logq() { __float128 f; logq(f);; } int main() { _check_logq();; return 0; } Compile failed inside link Defined "USE_REAL_DOUBLE" to "1" Defined make macro "PETSC_SCALAR_SIZE" to "64" Precision is double child PETSc.options.scalarTypes 15.601614 ================================================================================ TEST configureMkdir from config.programs(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/programs.py:22) TESTING: configureMkdir from config.programs(config/BuildSystem/config/programs.py:22) Make sure we can have mkdir automatically make intermediate directories Checking for program /usr/bin/mkdir...found Executing: /usr/bin/mkdir -p .conftest/tmp Adding -p flag to /usr/bin/mkdir -p to automatically create directories Defined make macro "MKDIR" to "/usr/bin/mkdir -p" ================================================================================ TEST configureAutoreconf from config.programs(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/programs.py:44) TESTING: configureAutoreconf from config.programs(config/BuildSystem/config/programs.py:44) Check for autoreconf Checking for program /usr/bin/autoreconf...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/bin/intel64/autoreconf...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64/compiler/autoreconf...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64_win/compiler/autoreconf...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/Common7/IDE/CommonExtensions/Microsoft/TestWindow/autoreconf...not found Checking for program /cygdrive/c/Program Files (x86)/MSBuild/12.0/bin/amd64/autoreconf...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/VC/BIN/amd64/autoreconf...not found Checking for program /cygdrive/c/WINDOWS/Microsoft.NET/Framework64/v4.0.30319/autoreconf...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/VC/VCPackages/autoreconf...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/Common7/IDE/autoreconf...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/Common7/Tools/autoreconf...not found Checking for program /cygdrive/c/Program Files (x86)/HTML Help Workshop/autoreconf...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/Team Tools/Performance Tools/x64/autoreconf...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/Team Tools/Performance Tools/autoreconf...not found Checking for program /cygdrive/c/Program Files (x86)/Windows Kits/8.1/bin/x64/autoreconf...not found Checking for program /cygdrive/c/Program Files (x86)/Windows Kits/8.1/bin/x86/autoreconf...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft SDKs/Windows/v8.1A/bin/NETFX 4.5.1 Tools/x64/autoreconf...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/mpi/intel64/bin/autoreconf...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/debugger_2018/gdb/intel64/bin/autoreconf...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/debugger_2018/libipt/intel64/lib/autoreconf...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64/ipp/autoreconf...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64_win/mkl/autoreconf...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64_win/compiler/autoreconf...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64/tbb/vc12/autoreconf...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64/tbb/vc12/autoreconf...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64_win/daal/autoreconf...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64_win/tbb/vc_mt/autoreconf...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/Advisor 2018/bin32/autoreconf...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/VTune Amplifier 2018/bin64/autoreconf...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/Inspector 2018/bin32/autoreconf...not found Checking for program /cygdrive/c/Program Files (x86)/Common Files/Intel/Shared Libraries/redist/intel64_win/mpirt/autoreconf...not found Checking for program /cygdrive/c/Program Files (x86)/Common Files/Intel/Shared Libraries/redist/ia32_win/mpirt/autoreconf...not found Checking for program /cygdrive/c/Program Files (x86)/Common Files/Intel/Shared Libraries/redist/intel64_win/compiler/autoreconf...not found Checking for program /cygdrive/c/Program Files (x86)/Common Files/Intel/Shared Libraries/redist/ia32_win/compiler/autoreconf...not found Checking for program /cygdrive/c/Program Files (x86)/Common Files/Oracle/Java/javapath/autoreconf...not found Checking for program /cygdrive/c/ProgramData/Oracle/Java/javapath/autoreconf...not found Checking for program /cygdrive/c/Common/Oracle/InstantClient112x64/bin/autoreconf...not found Checking for program /cygdrive/c/Common/Oracle/InstantClient112x86/bin/autoreconf...not found Checking for program /cygdrive/c/Common/Oracle/InstantClient112x86/autoreconf...not found Checking for program /cygdrive/c/Common/Oracle/InstantClient112x64/autoreconf...not found Checking for program /cygdrive/c/WINDOWS/system32/autoreconf...not found Checking for program /cygdrive/c/WINDOWS/autoreconf...not found Checking for program /cygdrive/c/WINDOWS/System32/Wbem/autoreconf...not found Checking for program /cygdrive/c/WINDOWS/System32/WindowsPowerShell/v1.0/autoreconf...not found Checking for program /cygdrive/c/WINDOWS/System32/OpenSSH/autoreconf...not found Checking for program /cygdrive/c/Program Files (x86)/BBWin/bin/autoreconf...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft SQL Server/90/Tools/binn/autoreconf...not found Checking for program /cygdrive/c/APPS/PE/bin/autoreconf...not found Checking for program /cygdrive/c/Program Files (x86)/Java/jre6/bin/autoreconf...not found Checking for program /cygdrive/c/APPS/PE/efclient/bin/autoreconf...not found Checking for program /cygdrive/c/Program Files/TortoiseSVN/bin/autoreconf...not found Checking for program /cygdrive/c/Program Files (x86)/Windows Kits/8.1/Windows Performance Toolkit/autoreconf...not found Checking for program /cygdrive/c/Program Files/Microsoft SQL Server/110/Tools/Binn/autoreconf...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft SDKs/TypeScript/1.0/autoreconf...not found Checking for program /cygdrive/c/Program Files/Microsoft SQL Server/120/Tools/Binn/autoreconf...not found Checking for program /cygdrive/c/Users/qlu/AppData/Local/Microsoft/WindowsApp/autoreconf...not found Checking for program /cygdrive/c/Program Files/mpich2x64/lib"/autoreconf...not found Checking for program /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/autoreconf...not found Checking for program /usr/bin/libtoolize...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/bin/intel64/libtoolize...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64/compiler/libtoolize...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64_win/compiler/libtoolize...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/Common7/IDE/CommonExtensions/Microsoft/TestWindow/libtoolize...not found Checking for program /cygdrive/c/Program Files (x86)/MSBuild/12.0/bin/amd64/libtoolize...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/VC/BIN/amd64/libtoolize...not found Checking for program /cygdrive/c/WINDOWS/Microsoft.NET/Framework64/v4.0.30319/libtoolize...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/VC/VCPackages/libtoolize...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/Common7/IDE/libtoolize...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/Common7/Tools/libtoolize...not found Checking for program /cygdrive/c/Program Files (x86)/HTML Help Workshop/libtoolize...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/Team Tools/Performance Tools/x64/libtoolize...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/Team Tools/Performance Tools/libtoolize...not found Checking for program /cygdrive/c/Program Files (x86)/Windows Kits/8.1/bin/x64/libtoolize...not found Checking for program /cygdrive/c/Program Files (x86)/Windows Kits/8.1/bin/x86/libtoolize...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft SDKs/Windows/v8.1A/bin/NETFX 4.5.1 Tools/x64/libtoolize...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/mpi/intel64/bin/libtoolize...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/debugger_2018/gdb/intel64/bin/libtoolize...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/debugger_2018/libipt/intel64/lib/libtoolize...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64/ipp/libtoolize...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64_win/mkl/libtoolize...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64_win/compiler/libtoolize...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64/tbb/vc12/libtoolize...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64/tbb/vc12/libtoolize...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64_win/daal/libtoolize...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64_win/tbb/vc_mt/libtoolize...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/Advisor 2018/bin32/libtoolize...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/VTune Amplifier 2018/bin64/libtoolize...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/Inspector 2018/bin32/libtoolize...not found Checking for program /cygdrive/c/Program Files (x86)/Common Files/Intel/Shared Libraries/redist/intel64_win/mpirt/libtoolize...not found Checking for program /cygdrive/c/Program Files (x86)/Common Files/Intel/Shared Libraries/redist/ia32_win/mpirt/libtoolize...not found Checking for program /cygdrive/c/Program Files (x86)/Common Files/Intel/Shared Libraries/redist/intel64_win/compiler/libtoolize...not found Checking for program /cygdrive/c/Program Files (x86)/Common Files/Intel/Shared Libraries/redist/ia32_win/compiler/libtoolize...not found Checking for program /cygdrive/c/Program Files (x86)/Common Files/Oracle/Java/javapath/libtoolize...not found Checking for program /cygdrive/c/ProgramData/Oracle/Java/javapath/libtoolize...not found Checking for program /cygdrive/c/Common/Oracle/InstantClient112x64/bin/libtoolize...not found Checking for program /cygdrive/c/Common/Oracle/InstantClient112x86/bin/libtoolize...not found Checking for program /cygdrive/c/Common/Oracle/InstantClient112x86/libtoolize...not found Checking for program /cygdrive/c/Common/Oracle/InstantClient112x64/libtoolize...not found Checking for program /cygdrive/c/WINDOWS/system32/libtoolize...not found Checking for program /cygdrive/c/WINDOWS/libtoolize...not found Checking for program /cygdrive/c/WINDOWS/System32/Wbem/libtoolize...not found Checking for program /cygdrive/c/WINDOWS/System32/WindowsPowerShell/v1.0/libtoolize...not found Checking for program /cygdrive/c/WINDOWS/System32/OpenSSH/libtoolize...not found Checking for program /cygdrive/c/Program Files (x86)/BBWin/bin/libtoolize...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft SQL Server/90/Tools/binn/libtoolize...not found Checking for program /cygdrive/c/APPS/PE/bin/libtoolize...not found Checking for program /cygdrive/c/Program Files (x86)/Java/jre6/bin/libtoolize...not found Checking for program /cygdrive/c/APPS/PE/efclient/bin/libtoolize...not found Checking for program /cygdrive/c/Program Files/TortoiseSVN/bin/libtoolize...not found Checking for program /cygdrive/c/Program Files (x86)/Windows Kits/8.1/Windows Performance Toolkit/libtoolize...not found Checking for program /cygdrive/c/Program Files/Microsoft SQL Server/110/Tools/Binn/libtoolize...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft SDKs/TypeScript/1.0/libtoolize...not found Checking for program /cygdrive/c/Program Files/Microsoft SQL Server/120/Tools/Binn/libtoolize...not found Checking for program /cygdrive/c/Users/qlu/AppData/Local/Microsoft/WindowsApp/libtoolize...not found Checking for program /cygdrive/c/Program Files/mpich2x64/lib"/libtoolize...not found Checking for program /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/libtoolize...not found Checking for program /usr/bin/glibtoolize...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/bin/intel64/glibtoolize...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64/compiler/glibtoolize...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64_win/compiler/glibtoolize...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/Common7/IDE/CommonExtensions/Microsoft/TestWindow/glibtoolize...not found Checking for program /cygdrive/c/Program Files (x86)/MSBuild/12.0/bin/amd64/glibtoolize...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/VC/BIN/amd64/glibtoolize...not found Checking for program /cygdrive/c/WINDOWS/Microsoft.NET/Framework64/v4.0.30319/glibtoolize...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/VC/VCPackages/glibtoolize...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/Common7/IDE/glibtoolize...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/Common7/Tools/glibtoolize...not found Checking for program /cygdrive/c/Program Files (x86)/HTML Help Workshop/glibtoolize...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/Team Tools/Performance Tools/x64/glibtoolize...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/Team Tools/Performance Tools/glibtoolize...not found Checking for program /cygdrive/c/Program Files (x86)/Windows Kits/8.1/bin/x64/glibtoolize...not found Checking for program /cygdrive/c/Program Files (x86)/Windows Kits/8.1/bin/x86/glibtoolize...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft SDKs/Windows/v8.1A/bin/NETFX 4.5.1 Tools/x64/glibtoolize...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/mpi/intel64/bin/glibtoolize...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/debugger_2018/gdb/intel64/bin/glibtoolize...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/debugger_2018/libipt/intel64/lib/glibtoolize...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64/ipp/glibtoolize...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64_win/mkl/glibtoolize...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64_win/compiler/glibtoolize...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64/tbb/vc12/glibtoolize...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64/tbb/vc12/glibtoolize...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64_win/daal/glibtoolize...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64_win/tbb/vc_mt/glibtoolize...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/Advisor 2018/bin32/glibtoolize...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/VTune Amplifier 2018/bin64/glibtoolize...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/Inspector 2018/bin32/glibtoolize...not found Checking for program /cygdrive/c/Program Files (x86)/Common Files/Intel/Shared Libraries/redist/intel64_win/mpirt/glibtoolize...not found Checking for program /cygdrive/c/Program Files (x86)/Common Files/Intel/Shared Libraries/redist/ia32_win/mpirt/glibtoolize...not found Checking for program /cygdrive/c/Program Files (x86)/Common Files/Intel/Shared Libraries/redist/intel64_win/compiler/glibtoolize...not found Checking for program /cygdrive/c/Program Files (x86)/Common Files/Intel/Shared Libraries/redist/ia32_win/compiler/glibtoolize...not found Checking for program /cygdrive/c/Program Files (x86)/Common Files/Oracle/Java/javapath/glibtoolize...not found Checking for program /cygdrive/c/ProgramData/Oracle/Java/javapath/glibtoolize...not found Checking for program /cygdrive/c/Common/Oracle/InstantClient112x64/bin/glibtoolize...not found Checking for program /cygdrive/c/Common/Oracle/InstantClient112x86/bin/glibtoolize...not found Checking for program /cygdrive/c/Common/Oracle/InstantClient112x86/glibtoolize...not found Checking for program /cygdrive/c/Common/Oracle/InstantClient112x64/glibtoolize...not found Checking for program /cygdrive/c/WINDOWS/system32/glibtoolize...not found Checking for program /cygdrive/c/WINDOWS/glibtoolize...not found Checking for program /cygdrive/c/WINDOWS/System32/Wbem/glibtoolize...not found Checking for program /cygdrive/c/WINDOWS/System32/WindowsPowerShell/v1.0/glibtoolize...not found Checking for program /cygdrive/c/WINDOWS/System32/OpenSSH/glibtoolize...not found Checking for program /cygdrive/c/Program Files (x86)/BBWin/bin/glibtoolize...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft SQL Server/90/Tools/binn/glibtoolize...not found Checking for program /cygdrive/c/APPS/PE/bin/glibtoolize...not found Checking for program /cygdrive/c/Program Files (x86)/Java/jre6/bin/glibtoolize...not found Checking for program /cygdrive/c/APPS/PE/efclient/bin/glibtoolize...not found Checking for program /cygdrive/c/Program Files/TortoiseSVN/bin/glibtoolize...not found Checking for program /cygdrive/c/Program Files (x86)/Windows Kits/8.1/Windows Performance Toolkit/glibtoolize...not found Checking for program /cygdrive/c/Program Files/Microsoft SQL Server/110/Tools/Binn/glibtoolize...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft SDKs/TypeScript/1.0/glibtoolize...not found Checking for program /cygdrive/c/Program Files/Microsoft SQL Server/120/Tools/Binn/glibtoolize...not found Checking for program /cygdrive/c/Users/qlu/AppData/Local/Microsoft/WindowsApp/glibtoolize...not found Checking for program /cygdrive/c/Program Files/mpich2x64/lib"/glibtoolize...not found Checking for program /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/glibtoolize...not found ================================================================================ TEST configurePrograms from config.programs(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/programs.py:71) TESTING: configurePrograms from config.programs(config/BuildSystem/config/programs.py:71) Check for the programs needed to build and run PETSc Checking for program /usr/bin/sh...found Defined make macro "SHELL" to "/usr/bin/sh" Checking for program /usr/bin/sed...found Defined make macro "SED" to "/usr/bin/sed" All intermediate test results are stored in /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.programs Executing: /usr/bin/sed -i s/sed/sd/g "/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.programs/sed1" Adding SEDINPLACE cmd: /usr/bin/sed -i Defined make macro "SEDINPLACE" to "/usr/bin/sed -i" Checking for program /usr/bin/mv...found Defined make macro "MV" to "/usr/bin/mv" Checking for program /usr/bin/cp...found Defined make macro "CP" to "/usr/bin/cp" Checking for program /usr/bin/grep...found Defined make macro "GREP" to "/usr/bin/grep" Checking for program /usr/bin/rm...found Defined make macro "RM" to "/usr/bin/rm -f" Checking for program /usr/bin/diff...found Executing: "/usr/bin/diff" -w "/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.programs/diff1" "/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.programs/diff2" Defined make macro "DIFF" to "/usr/bin/diff -w" Checking for program /usr/ucb/ps...not found Checking for program /usr/usb/ps...not found Checking for program /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/ps...not found Defined make macro "PYTHON" to "/usr/bin/python" Checking for program /usr/bin/m4...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/bin/intel64/m4...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64/compiler/m4...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64_win/compiler/m4...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/Common7/IDE/CommonExtensions/Microsoft/TestWindow/m4...not found Checking for program /cygdrive/c/Program Files (x86)/MSBuild/12.0/bin/amd64/m4...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/VC/BIN/amd64/m4...not found Checking for program /cygdrive/c/WINDOWS/Microsoft.NET/Framework64/v4.0.30319/m4...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/VC/VCPackages/m4...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/Common7/IDE/m4...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/Common7/Tools/m4...not found Checking for program /cygdrive/c/Program Files (x86)/HTML Help Workshop/m4...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/Team Tools/Performance Tools/x64/m4...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 12.0/Team Tools/Performance Tools/m4...not found Checking for program /cygdrive/c/Program Files (x86)/Windows Kits/8.1/bin/x64/m4...not found Checking for program /cygdrive/c/Program Files (x86)/Windows Kits/8.1/bin/x86/m4...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft SDKs/Windows/v8.1A/bin/NETFX 4.5.1 Tools/x64/m4...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/mpi/intel64/bin/m4...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/debugger_2018/gdb/intel64/bin/m4...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/debugger_2018/libipt/intel64/lib/m4...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64/ipp/m4...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64_win/mkl/m4...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64_win/compiler/m4...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64/tbb/vc12/m4...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64/tbb/vc12/m4...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64_win/daal/m4...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/compilers_and_libraries_2018.5.274/windows/redist/intel64_win/tbb/vc_mt/m4...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/Advisor 2018/bin32/m4...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/VTune Amplifier 2018/bin64/m4...not found Checking for program /cygdrive/c/Program Files (x86)/IntelSWTools/Inspector 2018/bin32/m4...not found Checking for program /cygdrive/c/Program Files (x86)/Common Files/Intel/Shared Libraries/redist/intel64_win/mpirt/m4...not found Checking for program /cygdrive/c/Program Files (x86)/Common Files/Intel/Shared Libraries/redist/ia32_win/mpirt/m4...not found Checking for program /cygdrive/c/Program Files (x86)/Common Files/Intel/Shared Libraries/redist/intel64_win/compiler/m4...not found Checking for program /cygdrive/c/Program Files (x86)/Common Files/Intel/Shared Libraries/redist/ia32_win/compiler/m4...not found Checking for program /cygdrive/c/Program Files (x86)/Common Files/Oracle/Java/javapath/m4...not found Checking for program /cygdrive/c/ProgramData/Oracle/Java/javapath/m4...not found Checking for program /cygdrive/c/Common/Oracle/InstantClient112x64/bin/m4...not found Checking for program /cygdrive/c/Common/Oracle/InstantClient112x86/bin/m4...not found Checking for program /cygdrive/c/Common/Oracle/InstantClient112x86/m4...not found Checking for program /cygdrive/c/Common/Oracle/InstantClient112x64/m4...not found Checking for program /cygdrive/c/WINDOWS/system32/m4...not found Checking for program /cygdrive/c/WINDOWS/m4...not found Checking for program /cygdrive/c/WINDOWS/System32/Wbem/m4...not found Checking for program /cygdrive/c/WINDOWS/System32/WindowsPowerShell/v1.0/m4...not found Checking for program /cygdrive/c/WINDOWS/System32/OpenSSH/m4...not found Checking for program /cygdrive/c/Program Files (x86)/BBWin/bin/m4...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft SQL Server/90/Tools/binn/m4...not found Checking for program /cygdrive/c/APPS/PE/bin/m4...not found Checking for program /cygdrive/c/Program Files (x86)/Java/jre6/bin/m4...not found Checking for program /cygdrive/c/APPS/PE/efclient/bin/m4...not found Checking for program /cygdrive/c/Program Files/TortoiseSVN/bin/m4...not found Checking for program /cygdrive/c/Program Files (x86)/Windows Kits/8.1/Windows Performance Toolkit/m4...not found Checking for program /cygdrive/c/Program Files/Microsoft SQL Server/110/Tools/Binn/m4...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft SDKs/TypeScript/1.0/m4...not found Checking for program /cygdrive/c/Program Files/Microsoft SQL Server/120/Tools/Binn/m4...not found Checking for program /cygdrive/c/Users/qlu/AppData/Local/Microsoft/WindowsApp/m4...not found Checking for program /cygdrive/c/Program Files/mpich2x64/lib"/m4...not found Checking for program /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/m4...not found child config.programs 1.318886 ================================================================================ TEST configureMake from config.packages.make(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/packages/make.py:87) TESTING: configureMake from config.packages.make(config/BuildSystem/config/packages/make.py:87) Check Guesses for GNU make Executing: /usr/bin/make --version stdout: GNU Make 4.3 Built for x86_64-pc-cygwin Copyright (C) 1988-2020 Free Software Foundation, Inc. License GPLv3+: GNU GPL version 3 or later This is free software: you are free to change and redistribute it. There is NO WARRANTY, to the extent permitted by law. Checking for program /usr/bin/make...found Defined make macro "MAKE" to "/usr/bin/make" ================================================================================ TEST setupGNUMake from config.packages.make(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/packages/make.py:121) TESTING: setupGNUMake from config.packages.make(config/BuildSystem/config/packages/make.py:121) Setup other GNU make stuff Executing: uname -s stdout: CYGWIN_NT-10.0 Executing: uname -s stdout: CYGWIN_NT-10.0 Defined make rule "libc" with dependencies "${LIBNAME}(${OBJSC})" and code [] Defined make rule "libcxx" with dependencies "${LIBNAME}(${OBJSCXX})" and code [] Defined make rule "libcu" with dependencies "${LIBNAME}(${OBJSCU})" and code [] Defined make rule "libf" with dependencies "${OBJSF}" and code -${AR} ${AR_FLAGS} ${LIBNAME} ${OBJSF} Defined make macro "OMAKE_PRINTDIR " to "/usr/bin/make --print-directory" Defined make macro "OMAKE" to "/usr/bin/make --no-print-directory" Defined make macro "MAKE_PAR_OUT_FLG" to "--output-sync=recurse" ================================================================================ TEST configureMakeNP from config.packages.make(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/packages/make.py:168) TESTING: configureMakeNP from config.packages.make(config/BuildSystem/config/packages/make.py:168) check no of cores on the build machine [perhaps to do make '-j ncores'] module multiprocessing found 16 cores: using make_np = 13 Defined make macro "MAKE_NP" to "13" Defined make macro "MAKE_TEST_NP" to "8" Defined make macro "MAKE_LOAD" to "24.0" Defined make macro "NPMAX" to "16" child config.packages.make 1.346793 ================================================================================ TEST alternateConfigureLibrary from config.packages.OpenMPI(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/package.py:917) TESTING: alternateConfigureLibrary from config.packages.OpenMPI(config/BuildSystem/config/package.py:917) Called if --with-packagename=0; does nothing by default child config.packages.OpenMPI 0.001136 Executing: uname -s stdout: CYGWIN_NT-10.0 ================================================================================ TEST alternateConfigureLibrary from config.packages.MPICH(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/package.py:917) TESTING: alternateConfigureLibrary from config.packages.MPICH(config/BuildSystem/config/package.py:917) Called if --with-packagename=0; does nothing by default child config.packages.MPICH 0.428647 ================================================================================ TEST checkDependencies from config.packages.MPI(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/package.py:834) TESTING: checkDependencies from config.packages.MPI(config/BuildSystem/config/package.py:834) ================================================================================ TEST configureLibrary from config.packages.MPI(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/packages/MPI.py:584) TESTING: configureLibrary from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:584) ================================================================================== Checking for a functional MPI Checking for library in User specified MPI libraries: ['/cygdrive/c/Program', 'Files', '(x86)/IntelSWTools/mpi/2019.6.166/intel64/lib/impicxx.lib'] Contents: ['bin', 'etc', 'include', 'lib', 'libfabric', 'test'] ================================================================================ TEST check from config.libraries(/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/libraries.py:157) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:157) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [MPI_Init MPI_Comm_create] in library ['/cygdrive/c/Program', 'Files', '(x86)/IntelSWTools/mpi/2019.6.166/intel64/lib/impicxx.lib'] [] Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -c -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries/conftest.o -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.compilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.closure -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.setCompilers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.headers -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.cacheDetails -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.types -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.functions -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.featureTestMacros -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.utilities.missing -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries -I/cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/PETSc.options.scalarTypes -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries/conftest.c stdout: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Init(); static void _check_MPI_Init() { MPI_Init(); } char MPI_Comm_create(); static void _check_MPI_Comm_create() { MPI_Comm_create(); } int main() { _check_MPI_Init(); _check_MPI_Comm_create();; return 0; } Executing: /cygdrive/c/cygwin_cache/petsc-3.12.4/lib/petsc/bin/win32fe/win32fe icl -o /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries/conftest.exe -Qwd10161 -MT -O3 /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/config.libraries/conftest.o /cygdrive/c/Program -lFiles \(x86\)/IntelSWTools/mpi/2019.6.166/intel64/lib/impicxx.lib Ws2_32.lib stdout: Warning: win32fe: File Not Found: (x86)/IntelSWTools/mpi/2019.6.166/intel64/lib/impicxx.lib ipo: error #11018: Cannot open C:\\Program ipo: error #11018: Cannot open libFiles.lib ipo: error #11018: Cannot open (x86)/IntelSWTools/mpi/2019.6.166/intel64/lib/impicxx.lib LINK : fatal error LNK1181: cannot open input file 'C:\\Program.obj' Possible ERROR while running linker: exit code 157 stdout: Warning: win32fe: File Not Found: (x86)/IntelSWTools/mpi/2019.6.166/intel64/lib/impicxx.lib ipo: error #11018: Cannot open C:\\Program ipo: error #11018: Cannot open libFiles.lib ipo: error #11018: Cannot open (x86)/IntelSWTools/mpi/2019.6.166/intel64/lib/impicxx.lib LINK : fatal error LNK1181: cannot open input file 'C:\\Program.obj'**** Configure header /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/confdefs.h **** #if !defined(INCLUDED_UNKNOWN) #define INCLUDED_UNKNOWN #define IS_COLORING_MAX USHRT_MAX #define MPIU_COLORING_VALUE MPI_UNSIGNED_SHORT #define _USE_MATH_DEFINES 1 #define PETSC_CLANGUAGE_C 1 #define PETSC_HAVE_ERF 1 #define PETSC_HAVE_FENV_H 1 #define PETSC_HAVE_LOG2 1 #define PETSC_HAVE_TGAMMA 1 #define PETSC_CXX_INLINE inline #define PETSC_CXX_RESTRICT __restrict #define PETSC_C_INLINE __inline #define PETSC_C_RESTRICT __restrict #define PETSC_FORTRAN_CHARLEN_T int #define PETSC_HAVE_C99 1 #define PETSC_HAVE_FORTRAN_CAPS 1 #define PETSC_HAVE_DIRECT_H 1 #define PETSC_HAVE_DOS_H 1 #define PETSC_HAVE_FCNTL_H 1 #define PETSC_HAVE_FLOAT_H 1 #define PETSC_HAVE_IMMINTRIN_H 1 #define PETSC_HAVE_INTTYPES_H 1 #define PETSC_HAVE_IO_H 1 #define PETSC_HAVE_MALLOC_H 1 #define PETSC_HAVE_SETJMP_H 1 #define PETSC_HAVE_STDINT_H 1 #define PETSC_HAVE_SYS_TYPES_H 1 #define PETSC_HAVE_TIME_H 1 #define PETSC_HAVE_WINDOWSX_H 1 #define PETSC_HAVE_WS2TCPIP_H 1 #define PETSC_HAVE_ISINF 1 #define PETSC_HAVE_ISNAN 1 #define PETSC_HAVE_ISNORMAL 1 #define PETSC_USE_REAL_DOUBLE 1 #define PETSC_HAVE_CXX_COMPLEX 1 #define PETSC_HAVE___INT64 1 #define PETSC_SIZEOF_INT 4 #define PETSC_SIZEOF_LONG 4 #define PETSC_SIZEOF_LONG_LONG 8 #define PETSC_SIZEOF_SHORT 2 #define PETSC_SIZEOF_SIZE_T 8 #define PETSC_SIZEOF_VOID_P 8 #define PETSC_USE_FORTRANKIND 1 #define PETSC_gid_t int #define PETSC_uid_t int #define PETSC_HAVE_ACCESS 1 #define PETSC_HAVE_CLOCK 1 #define PETSC_HAVE_GETCWD 1 #define PETSC_HAVE_LSEEK 1 #define PETSC_HAVE_MEMMOVE 1 #define PETSC_HAVE_RAND 1 #define PETSC_HAVE_STRICMP 1 #define PETSC_HAVE_TIME 1 #define PETSC_HAVE_VA_COPY 1 #define PETSC_HAVE_VSNPRINTF 1 #define PETSC_HAVE__ACCESS 1 #define PETSC_HAVE__GETCWD 1 #define PETSC_HAVE__LSEEK 1 #define PETSC_HAVE__MKDIR 1 #define PETSC_HAVE__SET_OUTPUT_FORMAT 1 #define PETSC_HAVE__SLEEP 1 #define PETSC_HAVE__SNPRINTF 1 #define PETSC_SIGNAL_CAST #define PETSC_FORTRAN_TYPE_INITIALIZE = -2 #define PETSC_HAVE_FORTRAN_FLUSH 1 #define PETSC_HAVE_FORTRAN_TYPE_STAR 1 #define PETSC_USING_F2003 1 #define PETSC_USING_F90 1 #define PETSC_USING_F90FREEFORM 1 #define PETSC_Alignx(a,b) #define PETSC_IS_COLOR_VALUE_TYPE short #define PETSC_IS_COLOR_VALUE_TYPE_F integer2 #define PETSC_USE_AVX512_KERNELS 1 #define PETSC_USE_BACKWARD_LOOP 1 #define PETSC_USE_CTABLE 1 #define PETSC_USE_INFO 1 #define PETSC_USE_LOG 1 #define PETSC_USE_MALLOC_COALESCED 1 #define PETSC_MEMALIGN 16 #define PETSC_LEVEL1_DCACHE_LINESIZE 32 #define PETSC__BSD_SOURCE 1 #define PETSC__DEFAULT_SOURCE 1 #define PETSC_HAVE_FORTRAN_GET_COMMAND_ARGUMENT 1 #define PETSC_USE_PROC_FOR_SIZE 1 #define PETSC_HAVE_CLOSESOCKET 1 #define PETSC_HAVE_WINSOCK2_H 1 #define PETSC_HAVE_WSAGETLASTERROR 1 #define PETSC_MISSING_SIGALRM 1 #define PETSC_MISSING_SIGBUS 1 #define PETSC_MISSING_SIGCHLD 1 #define PETSC_MISSING_SIGCONT 1 #define PETSC_MISSING_SIGHUP 1 #define PETSC_MISSING_SIGKILL 1 #define PETSC_MISSING_SIGPIPE 1 #define PETSC_MISSING_SIGQUIT 1 #define PETSC_MISSING_SIGSTOP 1 #define PETSC_MISSING_SIGSYS 1 #define PETSC_MISSING_SIGTRAP 1 #define PETSC_MISSING_SIGTSTP 1 #define PETSC_MISSING_SIGURG 1 #define PETSC_MISSING_SIGUSR1 1 #define PETSC_MISSING_SIGUSR2 1 #define PETSC_NEEDS_UTYPE_TYPEDEFS 1 #endif **** C specific Configure header /cygdrive/c/Users/qlu/AppData/Local/Temp/petsc-5CgK5O/conffix.h **** #if !defined(INCLUDED_UNKNOWN) #define INCLUDED_UNKNOWN typedef int int32_t; typedef int mode_t; typedef int pid_t; #if defined(__cplusplus) extern "C" { #include int getdomainname(char *, size_t); double drand48(void); void srand48(long int); } #else #include int getdomainname(char *, size_t); double drand48(void); void srand48(long int); #endif #endif ******************************************************************************* UNABLE to CONFIGURE with GIVEN OPTIONS (see configure.log for details): ------------------------------------------------------------------------------- --with-mpi-lib=['/cygdrive/c/Program', 'Files', '(x86)/IntelSWTools/mpi/2019.6.166/intel64/lib/impicxx.lib'] and --with-mpi-include=['/cygdrive/c/Program Files (x86)/IntelSWTools/mpi/2019.6.166/intel64/include'] did not work ******************************************************************************* File "/cygdrive/c/cygwin_cache/petsc-3.12.4/config/configure.py", line 447, in petsc_configure framework.configure(out = sys.stdout) File "/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/framework.py", line 1195, in configure self.processChildren() File "/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/framework.py", line 1184, in processChildren self.serialEvaluation(self.childGraph) File "/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/framework.py", line 1159, in serialEvaluation child.configure() File "/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/package.py", line 1088, in configure self.executeTest(self.configureLibrary) File "/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/base.py", line 139, in executeTest ret = test(*args,**kargs) File "/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/packages/MPI.py", line 589, in configureLibrary config.package.Package.configureLibrary(self) File "/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/package.py", line 866, in configureLibrary for location, directory, lib, incl in self.generateGuesses(): File "/cygdrive/c/cygwin_cache/petsc-3.12.4/config/BuildSystem/config/package.py", line 533, in generateGuesses raise RuntimeError(msg) ================================================================================ Finishing configure run at Mon, 30 Mar 2020 19:54:45 -0500 ================================================================================