================================================================================ ================================================================================ Starting configure run at Thu, 12 Mar 2020 19:56:26 -0400 Configure Options: --configModules=PETSc.Configure --optionsModule=config.compilerOptions --with-cc=mpicc --with-cxx=mpiCC --with-fc=mpif90 COPTFLAGS="-g -fast" CXXOPTFLAGS="-g -fast" FOPTFLAGS="-g -fast" --with-ssl=0 --with-batch=0 --with-mpiexec="jsrun -g 1" --with-cuda=1 --with-cudac=nvcc --with-cxx-dialect=cxx11 --download-hypre-configure-arguments=HYPRE_CUDA_SM=70 CUDAFLAGS="-ccbin pgc++" --download-metis --download-parmetis --download-hypre --with-x=0 --with-64-bit-indices=1 --with-debugging=0 PETSC_ARCH=arch-summit-opt64-pgi-hypre-cuda PETSC_DIR=/ccs/home/adams/petsc_install Working directory: /autofs/nccs-svm1_home1/adams/petsc_install Machine platform: ('Linux', 'batch5', '4.14.0-115.14.1.el7a.ppc64le', '#1 SMP Thu Oct 3 05:32:24 EDT 2019', 'ppc64le', 'ppc64le') Python version: 2.7.5 (default, Jun 11 2019, 16:23:49) [GCC 4.8.5 20150623 (Red Hat 4.8.5-36)] ================================================================================ ================================================================================ TEST configureExternalPackagesDir from config.framework(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/framework.py:911) TESTING: configureExternalPackagesDir from config.framework(config/BuildSystem/config/framework.py:911) ================================================================================ TEST configureDebuggers from config.utilities.debuggers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/utilities/debuggers.py:21) TESTING: configureDebuggers from config.utilities.debuggers(config/BuildSystem/config/utilities/debuggers.py:21) Find a default debugger and determine its arguments Running Executable WITHOUT threads to time it out Executing: uname -s stdout: Linux Checking for program /sw/sources/lsf-tools/2.0/summit/bin/gdb...not found Checking for program /sw/summit/xalt/1.2.0/bin/gdb...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/bin/gdb...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/cmake-3.15.2-xit2o3iepxvqbyku77lwcugufilztu7t/bin/gdb...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/bin/gdb...not found Checking for program /sw/summit/forge/20.0.1/bin/gdb...not found Checking for program /sw/summit/cuda/10.1.243/bin/gdb...not found Checking for program /opt/ibm/spectrumcomputing/lsf/10.1.0.9/linux3.10-glibc2.17-ppc64le-csm/bin/gdb...not found Checking for program /usr/bin/gdb...found Defined make macro "GDB" to "/usr/bin/gdb" Defined "USE_DEBUGGER" to ""gdb"" Running Executable WITHOUT threads to time it out Executing: uname -s stdout: Linux Defined make macro "DSYMUTIL" to "true" child config.utilities.debuggers 0.015835 ================================================================================ TEST configureDirectories from PETSc.options.petscdir(/autofs/nccs-svm1_home1/adams/petsc_install/config/PETSc/options/petscdir.py:23) TESTING: configureDirectories from PETSc.options.petscdir(config/PETSc/options/petscdir.py:23) Checks PETSC_DIR and sets if not set Version Information: #define PETSC_VERSION_RELEASE 0 #define PETSC_VERSION_MAJOR 3 #define PETSC_VERSION_MINOR 12 #define PETSC_VERSION_SUBMINOR 4 #define PETSC_VERSION_PATCH 0 #define PETSC_VERSION_DATE "unknown" #define PETSC_VERSION_GIT "unknown" #define PETSC_VERSION_DATE_GIT "unknown" #define PETSC_VERSION_EQ(MAJOR,MINOR,SUBMINOR) \ #define PETSC_VERSION_ PETSC_VERSION_EQ #define PETSC_VERSION_LT(MAJOR,MINOR,SUBMINOR) \ #define PETSC_VERSION_LE(MAJOR,MINOR,SUBMINOR) \ #define PETSC_VERSION_GT(MAJOR,MINOR,SUBMINOR) \ #define PETSC_VERSION_GE(MAJOR,MINOR,SUBMINOR) \ child PETSc.options.petscdir 0.004940 ================================================================================ TEST getDatafilespath from PETSc.options.dataFilesPath(/autofs/nccs-svm1_home1/adams/petsc_install/config/PETSc/options/dataFilesPath.py:29) TESTING: getDatafilespath from PETSc.options.dataFilesPath(config/PETSc/options/dataFilesPath.py:29) Checks what DATAFILESPATH should be child PETSc.options.dataFilesPath 0.001080 ================================================================================ TEST configureGit from config.sourceControl(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/sourceControl.py:24) TESTING: configureGit from config.sourceControl(config/BuildSystem/config/sourceControl.py:24) Find the Git executable Checking for program /sw/sources/lsf-tools/2.0/summit/bin/git...not found Checking for program /sw/summit/xalt/1.2.0/bin/git...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/bin/git...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/cmake-3.15.2-xit2o3iepxvqbyku77lwcugufilztu7t/bin/git...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/bin/git...not found Checking for program /sw/summit/forge/20.0.1/bin/git...not found Checking for program /sw/summit/cuda/10.1.243/bin/git...not found Checking for program /opt/ibm/spectrumcomputing/lsf/10.1.0.9/linux3.10-glibc2.17-ppc64le-csm/bin/git...not found Checking for program /usr/bin/git...found Defined make macro "GIT" to "git" Running Executable WITHOUT threads to time it out Executing: git --version stdout: git version 1.8.3.1 child config.sourceControl 0.007841 ================================================================================ TEST configureInstallationMethod from PETSc.options.petscclone(/autofs/nccs-svm1_home1/adams/petsc_install/config/PETSc/options/petscclone.py:20) TESTING: configureInstallationMethod from PETSc.options.petscclone(config/PETSc/options/petscclone.py:20) lib/petsc/bin/maint exists. This appears to be a repository clone .git directory exists Running Executable WITHOUT threads to time it out Executing: ['git', 'describe', '--match=v*'] stdout: v3.12.4-788-g752b181 Running Executable WITHOUT threads to time it out Executing: ['git', 'log', '-1', '--pretty=format:%H'] stdout: 752b1818c822dc2f790182c2d6ecb176b5ac3260 Running Executable WITHOUT threads to time it out Executing: ['git', 'log', '-1', '--pretty=format:%ci'] stdout: 2020-02-21 11:24:19 -0600 Running Executable WITHOUT threads to time it out Executing: ['git', 'branch'] stdout: * stefanozampini/hypre-cuda-rebased-v2 Defined "VERSION_GIT" to ""v3.12.4-788-g752b181"" Defined "VERSION_DATE_GIT" to ""2020-02-21 11:24:19 -0600"" Defined "VERSION_BRANCH_GIT" to ""stefanozampini/hypre-cuda-rebased-v2"" child PETSc.options.petscclone 0.145871 ================================================================================ TEST setNativeArchitecture from PETSc.options.arch(/autofs/nccs-svm1_home1/adams/petsc_install/config/PETSc/options/arch.py:31) TESTING: setNativeArchitecture from PETSc.options.arch(config/PETSc/options/arch.py:31) ================================================================================ TEST configureArchitecture from PETSc.options.arch(/autofs/nccs-svm1_home1/adams/petsc_install/config/PETSc/options/arch.py:43) TESTING: configureArchitecture from PETSc.options.arch(config/PETSc/options/arch.py:43) Checks PETSC_ARCH and sets if not set =============================================================================== Warning: PETSC_ARCH from environment does not match command-line or name of script. Warning: Using from command-line or name of script: arch-summit-opt64-pgi-hypre-cuda, ignoring environment: arch-summit-opt64-gnu-cuda =============================================================================== No previous hashfile found Setting hashfile: arch-summit-opt64-pgi-hypre-cuda/lib/petsc/conf/configure-hash Deleting configure hash file: arch-summit-opt64-pgi-hypre-cuda/lib/petsc/conf/configure-hash Unable to delete configure hash file: arch-summit-opt64-pgi-hypre-cuda/lib/petsc/conf/configure-hash child PETSc.options.arch 0.139946 ================================================================================ TEST setInstallDir from PETSc.options.installDir(/autofs/nccs-svm1_home1/adams/petsc_install/config/PETSc/options/installDir.py:35) TESTING: setInstallDir from PETSc.options.installDir(config/PETSc/options/installDir.py:35) setup installDir to either prefix or if that is not set to PETSC_DIR/PETSC_ARCH Defined make macro "PREFIXDIR" to "/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda" ================================================================================ TEST saveReconfigure from PETSc.options.installDir(/autofs/nccs-svm1_home1/adams/petsc_install/config/PETSc/options/installDir.py:80) TESTING: saveReconfigure from PETSc.options.installDir(config/PETSc/options/installDir.py:80) ================================================================================ TEST cleanConfDir from PETSc.options.installDir(/autofs/nccs-svm1_home1/adams/petsc_install/config/PETSc/options/installDir.py:73) TESTING: cleanConfDir from PETSc.options.installDir(config/PETSc/options/installDir.py:73) ================================================================================ TEST configureInstallDir from PETSc.options.installDir(/autofs/nccs-svm1_home1/adams/petsc_install/config/PETSc/options/installDir.py:57) TESTING: configureInstallDir from PETSc.options.installDir(config/PETSc/options/installDir.py:57) Makes installDir subdirectories if it does not exist for both prefix install location and PETSc work install location Changed persistence directory to /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/lib/petsc/conf ================================================================================ TEST restoreReconfigure from PETSc.options.installDir(/autofs/nccs-svm1_home1/adams/petsc_install/config/PETSc/options/installDir.py:93) TESTING: restoreReconfigure from PETSc.options.installDir(config/PETSc/options/installDir.py:93) child PETSc.options.installDir 0.009062 ================================================================================ TEST setExternalPackagesDir from PETSc.options.externalpackagesdir(/autofs/nccs-svm1_home1/adams/petsc_install/config/PETSc/options/externalpackagesdir.py:15) TESTING: setExternalPackagesDir from PETSc.options.externalpackagesdir(config/PETSc/options/externalpackagesdir.py:15) ================================================================================ TEST cleanExternalpackagesDir from PETSc.options.externalpackagesdir(/autofs/nccs-svm1_home1/adams/petsc_install/config/PETSc/options/externalpackagesdir.py:22) TESTING: cleanExternalpackagesDir from PETSc.options.externalpackagesdir(config/PETSc/options/externalpackagesdir.py:22) child PETSc.options.externalpackagesdir 0.000278 ================================================================================ TEST configureCLanguage from PETSc.options.languages(/autofs/nccs-svm1_home1/adams/petsc_install/config/PETSc/options/languages.py:27) TESTING: configureCLanguage from PETSc.options.languages(config/PETSc/options/languages.py:27) Choose whether to compile the PETSc library using a C or C++ compiler C language is C Defined "CLANGUAGE_C" to "1" Defined make macro "CLANGUAGE" to "C" child PETSc.options.languages 0.001123 ================================================================================ TEST printEnvVariables from config.setCompilers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/setCompilers.py:1718) TESTING: printEnvVariables from config.setCompilers(config/BuildSystem/config/setCompilers.py:1718) **** printenv **** USER=adams LMOD_FAMILY_MPI=spectrum-mpi XL_LINKER=/sw/summit/xalt/1.2.0/bin/ld __LMOD_REF_COUNT_LOADEDMODULES=hsi/5.0.2.p5:1;xalt/1.2.0:1;lsf-tools/2.0:1;darshan-runtime/3.1.7:1;DefApps:1;cuda/10.1.243:1;forge/20.0.1:1;pgi/19.9:1;cmake/3.15.2:1;spectrum-mpi/10.3.1.2-20200121:1;netlib-lapack/3.8.0:1 PAMI_IBV_ENABLE_DCT=1 __LMOD_REF_COUNT_MODULEPATH=/autofs/nccs-svm1_sw/summit/modulefiles/site/linux-rhel7-ppc64le/spectrum-mpi/10.3.1.2-20200121-zy6l7p3/pgi/19.9:1;/sw/summit/modulefiles/site/linux-rhel7-ppc64le/pgi-extensions:1;/autofs/nccs-svm1_sw/summit/modulefiles/site/linux-rhel7-ppc64le/pgi/19.9:1;/sw/summit/modulefiles/site/linux-rhel7-ppc64le/Core:1;/sw/summit/modulefiles/core:1 LMOD_SETTARG_FULL_SUPPORT=no LSB_MCPU_HOSTS=batch5 1 a27n08 42 PAMI_IBV_ADAPTER_AFFINITY=1 LSB_TRAPSIGS=trap # 15 10 12 2 1 BASH_FUNC_ml()=() { eval $($LMOD_DIR/ml_cmd "$@") } BSUB_BLOCK_EXEC_HOST= CUDA_DIR=/sw/summit/cuda/10.1.243 SHELL=/bin/bash LMOD_MPI_VERSION=10.3.1.2-20200121-zy6l7p3 LSB_UNIXGROUP_INT=adams HISTSIZE=100 LS_EXEC_T=START OLCF_FAMILY_MPI=spectrum-mpi MANPATH=/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/share/man:/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/man:/sw/summit/cuda/10.1.243/doc/man:/sw/sources/hpss/man:/sw/summit/lmod/8.2.10/share/man:/opt/ibm/spectrumcomputing/lsf/10.1.0.9/man::/opt/puppetlabs/puppet/share/man LSB_EEXEC_REAL_GID= XDG_RUNTIME_DIR=/run/user/62983 PYTHONPATH=/sw/summit/xalt/1.2.0/site:/sw/summit/xalt/1.2.0/libexec LSB_APPLICATION_NAME=small __LMOD_REF_COUNT_LIBRARY_PATH=/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/netlib-lapack-3.8.0-osgnhlqnprebssng2vsxn3dtgmwfutbb/lib64:1;/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib:1;/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/darshan-runtime-3.1.7-cnvxicgf5j4ap64qi6v5gxp67hmrjz43/lib:1 LMOD_FAMILY_COMPILER_VERSION=19.9 __LMOD_REF_COUNT_CMAKE_PREFIX_PATH=/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/netlib-lapack-3.8.0-osgnhlqnprebssng2vsxn3dtgmwfutbb:1;/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656:1;/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/cmake-3.15.2-xit2o3iepxvqbyku77lwcugufilztu7t:1;/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc:1;/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/darshan-runtime-3.1.7-cnvxicgf5j4ap64qi6v5gxp67hmrjz43:1 __Init_Default_Modules=1 LSF_INVOKE_CMD=bsub XDG_SESSION_ID=1185 LMOD_FAMILY_COMPILER=pgi __LMOD_Priority_PATH=/sw/sources/lsf-tools/2.0/summit/bin:-9999;/sw/summit/xalt/1.2.0/bin:-9999 LSB_JOBINDEX=0 LS_JOBPID=12107 LSB_JOBID=967283 OLCF_LMOD_ROOT=/sw/summit CXX=/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/bin/pgc++ OMPI_FC=pgfortran HOSTNAME=batch5 JSM_JSRUN_NO_WARN_TOPOLOGY=1 DDT_HOME=/sw/summit/forge/20.0.1 _ModuleTable002_=ZWZpbGVzL3NpdGUvbGludXgtcmhlbDctcHBjNjRsZS9wZ2kvMTkuOS9jbWFrZS8zLjE1LjIubHVhIixbImZ1bGxOYW1lIl09ImNtYWtlLzMuMTUuMiIsWyJsb2FkT3JkZXIiXT05LHByb3BUPXt9LFsic3RhY2tEZXB0aCJdPTAsWyJzdGF0dXMiXT0iYWN0aXZlIixbInVzZXJOYW1lIl09ImNtYWtlIix9LGN1ZGE9e1siZm4iXT0iL3N3L3N1bW1pdC9tb2R1bGVmaWxlcy9zaXRlL2xpbnV4LXJoZWw3LXBwYzY0bGUvQ29yZS9jdWRhLzEwLjEuMjQzIixbImZ1bGxOYW1lIl09ImN1ZGEvMTAuMS4yNDMiLFsibG9hZE9yZGVyIl09Nixwcm9wVD17fSxbInN0YWNrRGVwdGgiXT0wLFsic3RhdHVzIl09ImFjdGl2ZSIsWyJ1c2VyTmFtZSJdPSJjdWRhIix9LFsiZGFyc2hhbi1ydW50aW1l PETSC_ARCH=arch-summit-opt64-pgi-hypre-cuda LSB_JOBRES_PID=12107 MAIL=/var/spool/mail/adams LS_COLORS=rs=0:di=01;34:ln=01;36:mh=00:pi=40;33:so=01;35:do=01;35:bd=40;33;01:cd=40;33;01:or=40;31;01:mi=01;05;37;41:su=37;41:sg=30;43:ca=30;41:tw=30;42:ow=34;42:st=37;44:ex=01;32:*.tar=01;31:*.tgz=01;31:*.arc=01;31:*.arj=01;31:*.taz=01;31:*.lha=01;31:*.lz4=01;31:*.lzh=01;31:*.lzma=01;31:*.tlz=01;31:*.txz=01;31:*.tzo=01;31:*.t7z=01;31:*.zip=01;31:*.z=01;31:*.Z=01;31:*.dz=01;31:*.gz=01;31:*.lrz=01;31:*.lz=01;31:*.lzo=01;31:*.xz=01;31:*.bz2=01;31:*.bz=01;31:*.tbz=01;31:*.tbz2=01;31:*.tz=01;31:*.deb=01;31:*.rpm=01;31:*.jar=01;31:*.war=01;31:*.ear=01;31:*.sar=01;31:*.rar=01;31:*.alz=01;31:*.ace=01;31:*.zoo=01;31:*.cpio=01;31:*.7z=01;31:*.rz=01;31:*.cab=01;31:*.jpg=01;35:*.jpeg=01;35:*.gif=01;35:*.bmp=01;35:*.pbm=01;35:*.pgm=01;35:*.ppm=01;35:*.tga=01;35:*.xbm=01;35:*.xpm=01;35:*.tif=01;35:*.tiff=01;35:*.png=01;35:*.svg=01;35:*.svgz=01;35:*.mng=01;35:*.pcx=01;35:*.mov=01;35:*.mpg=01;35:*.mpeg=01;35:*.m2v=01;35:*.mkv=01;35:*.webm=01;35:*.ogm=01;35:*.mp4=01;35:*.m4v=01;35:*.mp4v=01;35:*.vob=01;35:*.qt=01;35:*.nuv=01;35:*.wmv=01;35:*.asf=01;35:*.rm=01;35:*.rmvb=01;35:*.flc=01;35:*.avi=01;35:*.fli=01;35:*.flv=01;35:*.gl=01;35:*.dl=01;35:*.xcf=01;35:*.xwd=01;35:*.yuv=01;35:*.cgm=01;35:*.emf=01;35:*.axv=01;35:*.anx=01;35:*.ogv=01;35:*.ogx=01;35:*.aac=01;36:*.au=01;36:*.flac=01;36:*.mid=01;36:*.midi=01;36:*.mka=01;36:*.mp3=01;36:*.mpc=01;36:*.ogg=01;36:*.ra=01;36:*.wav=01;36:*.axa=01;36:*.oga=01;36:*.spx=01;36:*.xspf=01;36: OMPI_MCA_io=romio321 __LMOD_REF_COUNT_MANPATH=/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/share/man:1;/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/man:1;/sw/summit/cuda/10.1.243/doc/man:1;/sw/sources/hpss/man:1;/sw/summit/lmod/8.2.10/share/man:1;/opt/ibm/spectrumcomputing/lsf/10.1.0.9/man:1;/opt/puppetlabs/puppet/share/man:1 LSFUSER=adams OLCF_NETLIB_LAPACK_ROOT=/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/netlib-lapack-3.8.0-osgnhlqnprebssng2vsxn3dtgmwfutbb LESSOPEN=||/usr/bin/lesspipe.sh %s OLCF_CUDA_ROOT=/sw/summit/cuda/10.1.243 LSB_ACCT_FILE=/tmp/967283.tmpdir/.1584057234.967283.acct LSF_BINDIR=/opt/ibm/spectrumcomputing/lsf/10.1.0.9/linux3.10-glibc2.17-ppc64le-csm/bin _ModuleTable008_=X3N3L3N1bW1pdC9tb2R1bGVmaWxlcy9zaXRlL2xpbnV4LXJoZWw3LXBwYzY0bGUvcGdpLzE5LjkiLCIvc3cvc3VtbWl0L21vZHVsZWZpbGVzL3NpdGUvbGludXgtcmhlbDctcHBjNjRsZS9Db3JlIiwiL3N3L3N1bW1pdC9tb2R1bGVmaWxlcy9jb3JlIix9LFsic3lzdGVtQmFzZU1QQVRIIl09Ii9zdy9zdW1taXQvbW9kdWxlZmlsZXMvc2l0ZS9saW51eC1yaGVsNy1wcGM2NGxlL0NvcmU6L3N3L3N1bW1pdC9tb2R1bGVmaWxlcy9jb3JlIix9 CPATH=/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/netlib-lapack-3.8.0-osgnhlqnprebssng2vsxn3dtgmwfutbb/include:/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/include:/sw/summit/cuda/10.1.243/include LMOD_ROOT=/sw/summit/lmod LSB_EEXEC_REAL_UID= PAMI_ENABLE_STRIPING=0 LSB_DJOB_NUMPROC=43 LSB_EXEC_HOSTTYPE=LINUXPPC64LE LSF_VERSION=34 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order[r15s:pg] span[hosts=1] cu[type=rack:pref=config]}+42*{select[((CN) && (type == any))] order[r15s:pg] span[ptile=42] cu[type=rack:pref=config]} LMOD_DIR=/sw/summit/lmod/8.2.10/libexec GIT_PS1_SHOWDIRTYSTATE=1 FC=/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/bin/pgfortran LSB_INTERACTIVE=Y __LSF_JOB_TMPDIR__=/tmp/967283.tmpdir LMOD_PKG=/sw/summit/lmod/8.2.10 MODULEPATH_ROOT=/sw/summit/modulefiles HOME=/ccs/home/adams 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OLCF_MODULEPATH_ROOT=/sw/summit/modulefiles LSB_JOBRES_CALLBACK=48997@batch5 _ModuleTable005_=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 LSB_CHKFILENAME=/ccs/home/adams/.lsbatch/1584057234.967283 LSB_SUB_HOST=login2 LSB_XFER_OP= LS_SUBCWD=/ccs/home/adams/petsc_install LSB_ECHKPNT_RSH_CMD=ssh -o 'PasswordAuthentication no' -o 'StrictHostKeyChecking no' CC=/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/bin/pgcc __LMOD_REF_COUNT_CPATH=/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/netlib-lapack-3.8.0-osgnhlqnprebssng2vsxn3dtgmwfutbb/include:1;/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/include:1;/sw/summit/cuda/10.1.243/include:1 OLCF_PGI_ROOT=/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc LSF_LOGDIR=/var/log/lsf LMOD_CMD=/sw/summit/lmod/8.2.10/libexec/lmod PROJWORK=/gpfs/alpine/proj-shared LSB_SHMODE=y OMPI_CC=pgcc BASH_FUNC_module()=() { eval $($LMOD_CMD bash "$@") && eval $(${LMOD_SETTARG_CMD:-:} -s sh) } F77=/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/bin/pgfortran LSB_JOB_EXECUSER=adams XLSF_UIDDIR=/opt/ibm/spectrumcomputing/lsf/10.1.0.9/linux3.10-glibc2.17-ppc64le-csm/lib/uid LSB_JOBNAME=Not_Specified LSB_HOSTS=batch5 a27n08 a27n08 a27n08 a27n08 a27n08 a27n08 a27n08 a27n08 a27n08 a27n08 a27n08 a27n08 a27n08 a27n08 a27n08 a27n08 a27n08 a27n08 a27n08 a27n08 a27n08 a27n08 a27n08 a27n08 a27n08 a27n08 a27n08 a27n08 a27n08 a27n08 a27n08 a27n08 a27n08 a27n08 a27n08 a27n08 a27n08 a27n08 a27n08 a27n08 a27n08 a27n08 OLCF_DARSHAN_RUNTIME_ROOT=/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/darshan-runtime-3.1.7-cnvxicgf5j4ap64qi6v5gxp67hmrjz43 SSH_TTY=/dev/pts/4 LSB_EXIT_PRE_ABORT=99 LSB_JOBFILENAME=/ccs/home/adams/.lsbatch/1584057234.967283 LSB_AFFINITY_HOSTFILE=/ccs/home/adams/.lsbatch/1584057234.967283.hostAffinityFile PAMI_IBV_ENABLE_OOO_AR=1 OMPI_LD_PRELOAD_PREPEND=/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/darshan-runtime-3.1.7-cnvxicgf5j4ap64qi6v5gxp67hmrjz43/lib/libdarshan.so LMOD_SYSTEM_DEFAULT_MODULES=DefApps LSF_ENVDIR=/opt/ibm/spectrumcomputing/lsf/conf HOSTTYPE=LINUXPPC64LE SSH_CLIENT=160.91.202.152 38070 22 LSF_LD_LIBRARY_PATH=/opt/ibm/spectrumcomputing/lsf/10.1.0.9/linux3.10-glibc2.17-ppc64le-csm/lib:/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/gcc-6.4.0/netlib-lapack-3.8.0-wcabdyqhdi5rooxbkqa6x5d7hxyxwdkm/lib64:/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/gcc-6.4.0/spectrum-mpi-10.3.1.2-20200121-awz2q5brde7wgdqqw4ugalrkukeub4eb/lib:/sw/summit/gcc/6.4.0/lib64:/sw/summit/cuda/10.1.243/lib64:/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/darshan-runtime-3.1.7-cnvxicgf5j4ap64qi6v5gxp67hmrjz43/lib LOGNAME=adams ACLOCAL_PATH=/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/cmake-3.15.2-xit2o3iepxvqbyku77lwcugufilztu7t/share/aclocal LSF_LIM_API_NTRIES=1 PATH=/sw/sources/lsf-tools/2.0/summit/bin:/sw/summit/xalt/1.2.0/bin:/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/bin:/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/cmake-3.15.2-xit2o3iepxvqbyku77lwcugufilztu7t/bin:/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/bin:/sw/summit/forge/20.0.1/bin:/sw/summit/cuda/10.1.243/bin:/opt/ibm/spectrumcomputing/lsf/10.1.0.9/linux3.10-glibc2.17-ppc64le-csm/bin:/usr/bin:/usr/sbin:/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/darshan-runtime-3.1.7-cnvxicgf5j4ap64qi6v5gxp67hmrjz43/bin:/sw/sources/hpss/bin:/opt/ibm/spectrumcomputing/lsf/10.1.0.9/linux3.10-glibc2.17-ppc64le-csm/etc:/opt/ibm/csm/bin:/usr/local/bin:/usr/local/sbin:/opt/ibm/flightlog/bin:/opt/ibutils/bin:/opt/ibm/spectrum_mpi/jsm_pmix/bin:/opt/puppetlabs/bin:/usr/lpp/mmfs/bin LSB_QUEUE=batch LSF_JOB_TIMESTAMP_VALUE=1584057262 CSM_ALLOCATION_ID=965196 TERM=xterm CMAKE_PREFIX_PATH=/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/netlib-lapack-3.8.0-osgnhlqnprebssng2vsxn3dtgmwfutbb:/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656:/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/cmake-3.15.2-xit2o3iepxvqbyku77lwcugufilztu7t:/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc:/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/darshan-runtime-3.1.7-cnvxicgf5j4ap64qi6v5gxp67hmrjz43 OPAL_LIBDIR=/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib LSB_DJOB_HOSTFILE=/ccs/home/adams/.lsbatch/1584057234.967283.hostfile LSF_LIBDIR=/opt/ibm/spectrumcomputing/lsf/10.1.0.9/linux3.10-glibc2.17-ppc64le-csm/lib PWD=/ccs/home/adams/petsc_install LSB_SUB_USER=adams _ModuleTable003_=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 XALT_OLCF=1 JOB_TERMINATE_INTERVAL=10 OMPI_DIR=/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656 OLCF_FAMILY_COMPILER_VERSION=19.9 SBD_KRB5CCNAME_VAL= LSB_RES_GET_FANOUT_INFO=Y MEMBERWORK=/gpfs/alpine/scratch/adams PAMI_IBV_QP_SERVICE_LEVEL=8 LSB_BATCH_JID=967283 WORLDWORK=/gpfs/alpine/world-shared LSB_SUB_RES_REQ=1*{select[LN]span[hosts=1]} + 42*{select[CN]span[ptile=42]} LMOD_sys=Linux LOADEDMODULES=hsi/5.0.2.p5:xalt/1.2.0:lsf-tools/2.0:darshan-runtime/3.1.7:DefApps:cuda/10.1.243:forge/20.0.1:pgi/19.9:cmake/3.15.2:spectrum-mpi/10.3.1.2-20200121:netlib-lapack/3.8.0 LSF_CGROUP_TOPDIR_KEY=summit HISTCONTROL=ignoredups OLCF_CMAKE_ROOT=/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/cmake-3.15.2-xit2o3iepxvqbyku77lwcugufilztu7t LS_EXECCWD=/ccs/home/adams/petsc_install _ModuleTable004_=ImZvcmdlIix9LGhzaT17WyJmbiJdPSIvc3cvc3VtbWl0L21vZHVsZWZpbGVzL3NpdGUvbGludXgtcmhlbDctcHBjNjRsZS9Db3JlL2hzaS81LjAuMi5wNS5sdWEiLFsiZnVsbE5hbWUiXT0iaHNpLzUuMC4yLnA1IixbImxvYWRPcmRlciJdPTEscHJvcFQ9e30sWyJzdGFja0RlcHRoIl09MSxbInN0YXR1cyJdPSJhY3RpdmUiLFsidXNlck5hbWUiXT0iaHNpIix9LFsibHNmLXRvb2xzIl09e1siZm4iXT0iL3N3L3N1bW1pdC9tb2R1bGVmaWxlcy9zaXRlL2xpbnV4LXJoZWw3LXBwYzY0bGUvQ29yZS9sc2YtdG9vbHMvMi4wLmx1YSIsWyJmdWxsTmFtZSJdPSJsc2YtdG9vbHMvMi4wIixbImxvYWRPcmRlciJdPTMscHJvcFQ9e30sWyJzdGFja0RlcHRoIl09MSxbInN0YXR1cyJdPSJh OLCF_HSI_ROOT=/sw/sources/hpss BINARY_TYPE_HPC= ================================================================================ TEST resetEnvCompilers from config.setCompilers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/setCompilers.py:1725) TESTING: resetEnvCompilers from config.setCompilers(config/BuildSystem/config/setCompilers.py:1725) CC (set to /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/bin/pgcc) found in environment variables - ignoring since also set on command line CXX (set to /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/bin/pgc++) found in environment variables - ignoring since also set on command line FC (set to /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/bin/pgfortran) found in environment variables - ignoring since also set on command line =============================================================================== ***** WARNING: F77 (set to /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/bin/pgfortran) found in environment variables - ignoring use ./configure F77=$F77 if you really want to use that value ****** =============================================================================== ================================================================================ TEST checkEnvCompilers from config.setCompilers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/setCompilers.py:1755) TESTING: checkEnvCompilers from config.setCompilers(config/BuildSystem/config/setCompilers.py:1755) ================================================================================ TEST checkMPICompilerOverride from config.setCompilers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/setCompilers.py:1688) TESTING: checkMPICompilerOverride from config.setCompilers(config/BuildSystem/config/setCompilers.py:1688) Check if --with-mpi-dir is used along with CC CXX or FC compiler options. This usually prevents mpi compilers from being used - so issue a warning ================================================================================ TEST requireMpiLdPath from config.setCompilers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/setCompilers.py:1709) TESTING: requireMpiLdPath from config.setCompilers(config/BuildSystem/config/setCompilers.py:1709) OpenMPI wrappers require LD_LIBRARY_PATH set ================================================================================ TEST checkInitialFlags from config.setCompilers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/setCompilers.py:458) TESTING: checkInitialFlags from config.setCompilers(config/BuildSystem/config/setCompilers.py:458) Initialize the compiler and linker flags Initialized CFLAGS to Initialized CFLAGS to Initialized LDFLAGS to Initialized CUDAFLAGS to -ccbin pgc++ Initialized CUDAFLAGS to -ccbin pgc++ Initialized LDFLAGS to Initialized CXXFLAGS to Initialized CXX_CXXFLAGS to Initialized LDFLAGS to Initialized FFLAGS to Initialized FFLAGS to Initialized LDFLAGS to Initialized CPPFLAGS to Initialized FPPFLAGS to Initialized CUDAPPFLAGS to -Wno-deprecated-gpu-targets Initialized CXXPPFLAGS to Initialized CC_LINKER_FLAGS to [] Initialized CXX_LINKER_FLAGS to [] Initialized FC_LINKER_FLAGS to [] Initialized CUDAC_LINKER_FLAGS to [] Initialized sharedLibraryFlags to [] Initialized dynamicLibraryFlags to [] ================================================================================ TEST checkCCompiler from config.setCompilers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/setCompilers.py:628) TESTING: checkCCompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:628) Locate a functional C compiler Checking for program /sw/sources/lsf-tools/2.0/summit/bin/mpicc...not found Checking for program /sw/summit/xalt/1.2.0/bin/mpicc...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/bin/mpicc...found Defined make macro "CC" to "mpicc" All intermediate test results are stored in /tmp/petsc-zrcSd3 All intermediate test results are stored in /tmp/petsc-zrcSd3/config.setCompilers Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers /tmp/petsc-zrcSd3/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers /tmp/petsc-zrcSd3/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.setCompilers/conftest /tmp/petsc-zrcSd3/config.setCompilers/conftest.o Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers /tmp/petsc-zrcSd3/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.setCompilers/conftest /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -lpetsc-ufod4vtr9mqHvKIQiVAm Possible ERROR while running linker: exit code 2 stderr: /usr/bin/ld: cannot find -lpetsc-ufod4vtr9mqHvKIQiVAm Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers /tmp/petsc-zrcSd3/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.setCompilers/conftest /tmp/petsc-zrcSd3/config.setCompilers/conftest.o Testing executable /tmp/petsc-zrcSd3/config.setCompilers/conftest to see if it can be run Executing: /tmp/petsc-zrcSd3/config.setCompilers/conftest Running Executable with threads to time it out at 60 Executing: /tmp/petsc-zrcSd3/config.setCompilers/conftest Running Executable WITHOUT threads to time it out Executing: mpicc --version stdout: pgcc 19.9-0 linuxpower target on Linuxpower PGI Compilers and Tools Copyright (c) 2019, NVIDIA CORPORATION. All rights reserved. Since MPI c compiler starts with mpi, force searches for other compilers to only look for MPI compilers ================================================================================ TEST checkCPreprocessor from config.setCompilers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/setCompilers.py:667) TESTING: checkCPreprocessor from config.setCompilers(config/BuildSystem/config/setCompilers.py:667) Locate a functional C preprocessor Checking for program /sw/sources/lsf-tools/2.0/summit/bin/mpicc...not found Checking for program /sw/summit/xalt/1.2.0/bin/mpicc...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/bin/mpicc...found Defined make macro "CPP" to "mpicc -E" Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers /tmp/petsc-zrcSd3/config.setCompilers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: ================================================================================ TEST checkCUDACompiler from config.setCompilers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/setCompilers.py:703) TESTING: checkCUDACompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:703) Locate a functional CUDA compiler Checking for program /sw/sources/lsf-tools/2.0/summit/bin/nvcc...not found Checking for program /sw/summit/xalt/1.2.0/bin/nvcc...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/bin/nvcc...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/cmake-3.15.2-xit2o3iepxvqbyku77lwcugufilztu7t/bin/nvcc...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/bin/nvcc...not found Checking for program /sw/summit/forge/20.0.1/bin/nvcc...not found Checking for program /sw/summit/cuda/10.1.243/bin/nvcc...found Defined make macro "CUDAC" to "nvcc" Running Executable WITHOUT threads to time it out Executing: nvcc -c -o /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers -ccbin pgc++ -Wno-deprecated-gpu-targets /tmp/petsc-zrcSd3/config.setCompilers/conftest.cu Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: nvcc --version stdout: nvcc: NVIDIA (R) Cuda compiler driver Copyright (c) 2005-2019 NVIDIA Corporation Built on Sun_Jul_28_19:07:52_PDT_2019 Cuda compilation tools, release 10.1, V10.1.243 ================================================================================ TEST checkCUDAPreprocessor from config.setCompilers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/setCompilers.py:743) TESTING: checkCUDAPreprocessor from config.setCompilers(config/BuildSystem/config/setCompilers.py:743) Locate a functional CUDA preprocessor Checking for program /sw/sources/lsf-tools/2.0/summit/bin/nvcc...not found Checking for program /sw/summit/xalt/1.2.0/bin/nvcc...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/bin/nvcc...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/cmake-3.15.2-xit2o3iepxvqbyku77lwcugufilztu7t/bin/nvcc...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/bin/nvcc...not found Checking for program /sw/summit/forge/20.0.1/bin/nvcc...not found Checking for program /sw/summit/cuda/10.1.243/bin/nvcc...found Defined make macro "CUDAPP" to "nvcc -E" Preprocessing source: #include "confdefs.h" #include "conffix.h" #include __global__ void testFunction() {return;}; Running Executable WITHOUT threads to time it out Executing: nvcc -E -I/tmp/petsc-zrcSd3/config.setCompilers -Wno-deprecated-gpu-targets /tmp/petsc-zrcSd3/config.setCompilers/conftest.cu Preprocess stderr before filtering:: Preprocess stderr after filtering:: ================================================================================ TEST checkCxxCompiler from config.setCompilers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/setCompilers.py:842) TESTING: checkCxxCompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:842) Locate a functional Cxx compiler Checking for program /sw/sources/lsf-tools/2.0/summit/bin/mpiCC...not found Checking for program /sw/summit/xalt/1.2.0/bin/mpiCC...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/bin/mpiCC...found Defined make macro "CXX" to "mpiCC" Running Executable WITHOUT threads to time it out Executing: mpiCC -c -o /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers /tmp/petsc-zrcSd3/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpiCC -c -o /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers /tmp/petsc-zrcSd3/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpiCC -o /tmp/petsc-zrcSd3/config.setCompilers/conftest /tmp/petsc-zrcSd3/config.setCompilers/conftest.o Running Executable WITHOUT threads to time it out Executing: mpiCC -c -o /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers /tmp/petsc-zrcSd3/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpiCC -o /tmp/petsc-zrcSd3/config.setCompilers/conftest /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -lpetsc-ufod4vtr9mqHvKIQiVAm Possible ERROR while running linker: exit code 2 stderr: /usr/bin/ld: cannot find -lpetsc-ufod4vtr9mqHvKIQiVAm Running Executable WITHOUT threads to time it out Executing: mpiCC -c -o /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers /tmp/petsc-zrcSd3/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpiCC -o /tmp/petsc-zrcSd3/config.setCompilers/conftest /tmp/petsc-zrcSd3/config.setCompilers/conftest.o Testing executable /tmp/petsc-zrcSd3/config.setCompilers/conftest to see if it can be run Executing: /tmp/petsc-zrcSd3/config.setCompilers/conftest Running Executable with threads to time it out at 60 Executing: /tmp/petsc-zrcSd3/config.setCompilers/conftest Running Executable WITHOUT threads to time it out Executing: mpiCC --version stdout: pgc++ 19.9-0 linuxpower target on Linuxpower PGI Compilers and Tools Copyright (c) 2019, NVIDIA CORPORATION. All rights reserved. ================================================================================ TEST checkCxxPreprocessor from config.setCompilers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/setCompilers.py:883) TESTING: checkCxxPreprocessor from config.setCompilers(config/BuildSystem/config/setCompilers.py:883) Locate a functional Cxx preprocessor Checking for program /sw/sources/lsf-tools/2.0/summit/bin/mpiCC...not found Checking for program /sw/summit/xalt/1.2.0/bin/mpiCC...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/bin/mpiCC...found Defined make macro "CXXPP" to "mpiCC -E" Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpiCC -E -I/tmp/petsc-zrcSd3/config.setCompilers /tmp/petsc-zrcSd3/config.setCompilers/conftest.cc Preprocess stderr before filtering:: Preprocess stderr after filtering:: ================================================================================ TEST checkFortranCompiler from config.setCompilers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/setCompilers.py:984) TESTING: checkFortranCompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:984) Locate a functional Fortran compiler Checking for program /sw/sources/lsf-tools/2.0/summit/bin/mpif90...not found Checking for program /sw/summit/xalt/1.2.0/bin/mpif90...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/bin/mpif90...found Defined make macro "FC" to "mpif90" Running Executable WITHOUT threads to time it out Executing: mpif90 -c -o /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers /tmp/petsc-zrcSd3/config.setCompilers/conftest.F90 Successful compile: Source: program main end Running Executable WITHOUT threads to time it out Executing: mpif90 -c -o /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers /tmp/petsc-zrcSd3/config.setCompilers/conftest.F90 Successful compile: Source: program main end Running Executable WITHOUT threads to time it out Executing: mpif90 -o /tmp/petsc-zrcSd3/config.setCompilers/conftest /tmp/petsc-zrcSd3/config.setCompilers/conftest.o Running Executable WITHOUT threads to time it out Executing: mpif90 -c -o /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers /tmp/petsc-zrcSd3/config.setCompilers/conftest.F90 Successful compile: Source: program main end Running Executable WITHOUT threads to time it out Executing: mpif90 -o /tmp/petsc-zrcSd3/config.setCompilers/conftest /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -lpetsc-ufod4vtr9mqHvKIQiVAm Possible ERROR while running linker: exit code 2 stderr: /usr/bin/ld: cannot find -lpetsc-ufod4vtr9mqHvKIQiVAm Running Executable WITHOUT threads to time it out Executing: mpif90 -c -o /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers /tmp/petsc-zrcSd3/config.setCompilers/conftest.F90 Successful compile: Source: program main end Running Executable WITHOUT threads to time it out Executing: mpif90 -o /tmp/petsc-zrcSd3/config.setCompilers/conftest /tmp/petsc-zrcSd3/config.setCompilers/conftest.o Testing executable /tmp/petsc-zrcSd3/config.setCompilers/conftest to see if it can be run Executing: /tmp/petsc-zrcSd3/config.setCompilers/conftest Running Executable with threads to time it out at 60 Executing: /tmp/petsc-zrcSd3/config.setCompilers/conftest Running Executable WITHOUT threads to time it out Executing: mpif90 --version stdout: pgfortran 19.9-0 linuxpower target on Linuxpower PGI Compilers and Tools Copyright (c) 2019, NVIDIA CORPORATION. All rights reserved. ================================================================================ TEST checkFortranPreprocessor from config.setCompilers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/setCompilers.py:1021) TESTING: checkFortranPreprocessor from config.setCompilers(config/BuildSystem/config/setCompilers.py:1021) Locate a functional Fortran preprocessor Checking for program /sw/sources/lsf-tools/2.0/summit/bin/mpif90...not found Checking for program /sw/summit/xalt/1.2.0/bin/mpif90...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/bin/mpif90...found Defined make macro "FPP" to "mpif90 -E" Deleting "FPP" Checking for program /sw/sources/lsf-tools/2.0/summit/bin/mpif90...not found Checking for program /sw/summit/xalt/1.2.0/bin/mpif90...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/bin/mpif90...found Defined make macro "FPP" to "mpif90 --use cpp32" Deleting "FPP" ================================================================================ TEST checkFortranComments from config.setCompilers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/setCompilers.py:1043) TESTING: checkFortranComments from config.setCompilers(config/BuildSystem/config/setCompilers.py:1043) Make sure fortran comment "!" works Running Executable WITHOUT threads to time it out Executing: mpif90 -c -o /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers /tmp/petsc-zrcSd3/config.setCompilers/conftest.F90 Successful compile: Source: program main ! comment end Fortran comments can use ! in column 1 ================================================================================ TEST checkLargeFileIO from config.setCompilers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/setCompilers.py:1174) TESTING: checkLargeFileIO from config.setCompilers(config/BuildSystem/config/setCompilers.py:1174) ================================================================================ TEST checkArchiver from config.setCompilers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/setCompilers.py:1273) TESTING: checkArchiver from config.setCompilers(config/BuildSystem/config/setCompilers.py:1273) Check that the archiver exists and can make a library usable by the compiler Running Executable WITHOUT threads to time it out Executing: ar -V stdout: GNU ar version 2.27-34.base.el7_6.1 Copyright (C) 2016 Free Software Foundation, Inc. This program is free software; you may redistribute it under the terms of the GNU General Public License version 3 or (at your option) any later version. This program has absolutely no warranty. Running Executable WITHOUT threads to time it out Executing: ar -V stdout: GNU ar version 2.27-34.base.el7_6.1 Copyright (C) 2016 Free Software Foundation, Inc. This program is free software; you may redistribute it under the terms of the GNU General Public License version 3 or (at your option) any later version. This program has absolutely no warranty. Defined make macro "FAST_AR_FLAGS" to "Scq" Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers /tmp/petsc-zrcSd3/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int foo(int a) { return a+1; } Checking for program /sw/sources/lsf-tools/2.0/summit/bin/ar...not found Checking for program /sw/summit/xalt/1.2.0/bin/ar...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/bin/ar...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/cmake-3.15.2-xit2o3iepxvqbyku77lwcugufilztu7t/bin/ar...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/bin/ar...not found Checking for program /sw/summit/forge/20.0.1/bin/ar...not found Checking for program /sw/summit/cuda/10.1.243/bin/ar...not found Checking for program /opt/ibm/spectrumcomputing/lsf/10.1.0.9/linux3.10-glibc2.17-ppc64le-csm/bin/ar...not found Checking for program /usr/bin/ar...found Defined make macro "AR" to "/usr/bin/ar" Checking for program /sw/sources/lsf-tools/2.0/summit/bin/ranlib...not found Checking for program /sw/summit/xalt/1.2.0/bin/ranlib...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/bin/ranlib...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/cmake-3.15.2-xit2o3iepxvqbyku77lwcugufilztu7t/bin/ranlib...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/bin/ranlib...not found Checking for program /sw/summit/forge/20.0.1/bin/ranlib...not found Checking for program /sw/summit/cuda/10.1.243/bin/ranlib...not found Checking for program /opt/ibm/spectrumcomputing/lsf/10.1.0.9/linux3.10-glibc2.17-ppc64le-csm/bin/ranlib...not found Checking for program /usr/bin/ranlib...found Defined make macro "RANLIB" to "/usr/bin/ranlib -c" Running Executable WITHOUT threads to time it out Executing: /usr/bin/ar cr /tmp/petsc-zrcSd3/config.setCompilers/libconf1.a /tmp/petsc-zrcSd3/config.setCompilers/conf1.o Running Executable WITHOUT threads to time it out Executing: /usr/bin/ranlib -c /tmp/petsc-zrcSd3/config.setCompilers/libconf1.a Possible ERROR while running ranlib: stderr: /usr/bin/ranlib: invalid option -- 'c' Ranlib is not functional with your archiver. Try --with-ranlib=true if ranlib is unnecessary. Running Executable WITHOUT threads to time it out Executing: ar -V stdout: GNU ar version 2.27-34.base.el7_6.1 Copyright (C) 2016 Free Software Foundation, Inc. This program is free software; you may redistribute it under the terms of the GNU General Public License version 3 or (at your option) any later version. This program has absolutely no warranty. Running Executable WITHOUT threads to time it out Executing: ar -V stdout: GNU ar version 2.27-34.base.el7_6.1 Copyright (C) 2016 Free Software Foundation, Inc. This program is free software; you may redistribute it under the terms of the GNU General Public License version 3 or (at your option) any later version. This program has absolutely no warranty. Defined make macro "FAST_AR_FLAGS" to "Scq" Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers /tmp/petsc-zrcSd3/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int foo(int a) { return a+1; } Checking for program /sw/sources/lsf-tools/2.0/summit/bin/ar...not found Checking for program /sw/summit/xalt/1.2.0/bin/ar...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/bin/ar...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/cmake-3.15.2-xit2o3iepxvqbyku77lwcugufilztu7t/bin/ar...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/bin/ar...not found Checking for program /sw/summit/forge/20.0.1/bin/ar...not found Checking for program /sw/summit/cuda/10.1.243/bin/ar...not found Checking for program /opt/ibm/spectrumcomputing/lsf/10.1.0.9/linux3.10-glibc2.17-ppc64le-csm/bin/ar...not found Checking for program /usr/bin/ar...found Defined make macro "AR" to "/usr/bin/ar" Checking for program /sw/sources/lsf-tools/2.0/summit/bin/ranlib...not found Checking for program /sw/summit/xalt/1.2.0/bin/ranlib...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/bin/ranlib...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/cmake-3.15.2-xit2o3iepxvqbyku77lwcugufilztu7t/bin/ranlib...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/bin/ranlib...not found Checking for program /sw/summit/forge/20.0.1/bin/ranlib...not found Checking for program /sw/summit/cuda/10.1.243/bin/ranlib...not found Checking for program /opt/ibm/spectrumcomputing/lsf/10.1.0.9/linux3.10-glibc2.17-ppc64le-csm/bin/ranlib...not found Checking for program /usr/bin/ranlib...found Defined make macro "RANLIB" to "/usr/bin/ranlib" Running Executable WITHOUT threads to time it out Executing: /usr/bin/ar cr /tmp/petsc-zrcSd3/config.setCompilers/libconf1.a /tmp/petsc-zrcSd3/config.setCompilers/conf1.o Running Executable WITHOUT threads to time it out Executing: /usr/bin/ranlib /tmp/petsc-zrcSd3/config.setCompilers/libconf1.a Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers /tmp/petsc-zrcSd3/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" extern int foo(int); int main() { int b = foo(1); if (b); ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.setCompilers/conftest /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -L/tmp/petsc-zrcSd3/config.setCompilers -lconf1 Defined make macro "AR_FLAGS" to "cr" Defined make macro "AR_LIB_SUFFIX" to "a" ================================================================================ TEST checkSharedLinker from config.setCompilers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/setCompilers.py:1387) TESTING: checkSharedLinker from config.setCompilers(config/BuildSystem/config/setCompilers.py:1387) Check that the linker can produce shared libraries Running Executable WITHOUT threads to time it out Executing: uname -s stdout: Linux Checking shared linker mpicc using flags ['-shared'] Checking for program /sw/sources/lsf-tools/2.0/summit/bin/mpicc...not found Checking for program /sw/summit/xalt/1.2.0/bin/mpicc...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/bin/mpicc...found Defined make macro "LD_SHARED" to "mpicc" Trying C compiler flag Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers /tmp/petsc-zrcSd3/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers /tmp/petsc-zrcSd3/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.setCompilers/conftest -shared /tmp/petsc-zrcSd3/config.setCompilers/conftest.o Valid C linker flag -shared Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers /tmp/petsc-zrcSd3/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int (*fprintf_ptr)(FILE*,const char*,...) = fprintf; void foo(void){ fprintf_ptr(stdout,"hello"); return; } void bar(void){foo();} Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.setCompilers/libconftest.so -shared /tmp/petsc-zrcSd3/config.setCompilers/conftest.o Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers /tmp/petsc-zrcSd3/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int foo(void); int main() { int ret = foo(); if (ret) {} ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.setCompilers/conftest /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -L/tmp/petsc-zrcSd3/config.setCompilers -lconftest Using shared linker mpicc with flags ['-shared'] and library extension so Running Executable WITHOUT threads to time it out Executing: uname -s stdout: Linux Running Executable WITHOUT threads to time it out Executing: uname -s stdout: Linux ================================================================================ TEST checkPIC from config.setCompilers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/setCompilers.py:1121) TESTING: checkPIC from config.setCompilers(config/BuildSystem/config/setCompilers.py:1121) Determine the PIC option for each compiler Trying Cxx for PIC code without any compiler flag Running Executable WITHOUT threads to time it out Executing: mpiCC -c -o /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers /tmp/petsc-zrcSd3/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpiCC -c -o /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers /tmp/petsc-zrcSd3/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int (*fprintf_ptr)(FILE*,const char*,...) = fprintf; void foo(void){ fprintf_ptr(stdout,"hello"); return; } void bar(void){foo();} Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.setCompilers/libconftest.so -shared /tmp/petsc-zrcSd3/config.setCompilers/conftest.o Accepted Cxx PIC code without compiler flag Trying FC for PIC code without any compiler flag Running Executable WITHOUT threads to time it out Executing: mpif90 -c -o /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers /tmp/petsc-zrcSd3/config.setCompilers/conftest.F90 Successful compile: Source: program main end Running Executable WITHOUT threads to time it out Executing: mpif90 -c -o /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers /tmp/petsc-zrcSd3/config.setCompilers/conftest.F90 Successful compile: Source: function foo(a) real:: a,x,bar common /xx/ x x=a foo = bar(x) end Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.setCompilers/libconftest.so -shared /tmp/petsc-zrcSd3/config.setCompilers/conftest.o Accepted FC PIC code without compiler flag Trying CUDA for PIC code without any compiler flag Running Executable WITHOUT threads to time it out Executing: nvcc -c -o /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers -ccbin pgc++ -Wno-deprecated-gpu-targets /tmp/petsc-zrcSd3/config.setCompilers/conftest.cu Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: nvcc -c -o /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers -ccbin pgc++ -Wno-deprecated-gpu-targets /tmp/petsc-zrcSd3/config.setCompilers/conftest.cu Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int (*fprintf_ptr)(FILE*,const char*,...) = fprintf; void foo(void){ fprintf_ptr(stdout,"hello"); return; } void bar(void){foo();} Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.setCompilers/libconftest.so -shared /tmp/petsc-zrcSd3/config.setCompilers/conftest.o Accepted CUDA PIC code without compiler flag ================================================================================ TEST checkSharedLinkerPaths from config.setCompilers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/setCompilers.py:1499) TESTING: checkSharedLinkerPaths from config.setCompilers(config/BuildSystem/config/setCompilers.py:1499) Determine the shared linker path options - IRIX: -rpath - Linux, OSF: -Wl,-rpath, - Solaris: -R - FreeBSD: -Wl,-R, Running Executable WITHOUT threads to time it out Executing: uname -s stdout: Linux Running Executable WITHOUT threads to time it out Executing: mpicc -V stdout: pgcc 19.9-0 linuxpower target on Linuxpower PGI Compilers and Tools Copyright (c) 2019, NVIDIA CORPORATION. All rights reserved. Trying C linker flag -Wl,-rpath, Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers /tmp/petsc-zrcSd3/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.setCompilers/conftest -Wl,-rpath,/autofs/nccs-svm1_home1/adams/petsc_install /tmp/petsc-zrcSd3/config.setCompilers/conftest.o Valid C linker flag -Wl,-rpath,/autofs/nccs-svm1_home1/adams/petsc_install Running Executable WITHOUT threads to time it out Executing: uname -s stdout: Linux Running Executable WITHOUT threads to time it out Executing: mpicc -V stdout: pgcc 19.9-0 linuxpower target on Linuxpower PGI Compilers and Tools Copyright (c) 2019, NVIDIA CORPORATION. All rights reserved. Trying Cxx linker flag -Wl,-rpath, Running Executable WITHOUT threads to time it out Executing: mpiCC -c -o /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers /tmp/petsc-zrcSd3/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpiCC -o /tmp/petsc-zrcSd3/config.setCompilers/conftest -Wl,-rpath,/autofs/nccs-svm1_home1/adams/petsc_install /tmp/petsc-zrcSd3/config.setCompilers/conftest.o Valid Cxx linker flag -Wl,-rpath,/autofs/nccs-svm1_home1/adams/petsc_install Running Executable WITHOUT threads to time it out Executing: uname -s stdout: Linux Running Executable WITHOUT threads to time it out Executing: mpicc -V stdout: pgcc 19.9-0 linuxpower target on Linuxpower PGI Compilers and Tools Copyright (c) 2019, NVIDIA CORPORATION. All rights reserved. Trying FC linker flag -Wl,-rpath, Running Executable WITHOUT threads to time it out Executing: mpif90 -c -o /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers /tmp/petsc-zrcSd3/config.setCompilers/conftest.F90 Successful compile: Source: program main end Running Executable WITHOUT threads to time it out Executing: mpif90 -o /tmp/petsc-zrcSd3/config.setCompilers/conftest -Wl,-rpath,/autofs/nccs-svm1_home1/adams/petsc_install /tmp/petsc-zrcSd3/config.setCompilers/conftest.o Valid FC linker flag -Wl,-rpath,/autofs/nccs-svm1_home1/adams/petsc_install Running Executable WITHOUT threads to time it out Executing: uname -s stdout: Linux Running Executable WITHOUT threads to time it out Executing: mpicc -V stdout: pgcc 19.9-0 linuxpower target on Linuxpower PGI Compilers and Tools Copyright (c) 2019, NVIDIA CORPORATION. All rights reserved. Trying CUDA linker flag -Wl,-rpath, Running Executable WITHOUT threads to time it out Executing: nvcc -c -o /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers -ccbin pgc++ -Wno-deprecated-gpu-targets /tmp/petsc-zrcSd3/config.setCompilers/conftest.cu Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: nvcc -o /tmp/petsc-zrcSd3/config.setCompilers/conftest -ccbin pgc++ /tmp/petsc-zrcSd3/config.setCompilers/conftest.o Valid CUDA linker flag -Wl,-rpath,/autofs/nccs-svm1_home1/adams/petsc_install ================================================================================ TEST checkLibC from config.setCompilers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/setCompilers.py:1534) TESTING: checkLibC from config.setCompilers(config/BuildSystem/config/setCompilers.py:1534) Test whether we need to explicitly include libc in shared linking - Mac OSX requires an explicit reference to libc for shared linking Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers /tmp/petsc-zrcSd3/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int foo(void) {void *chunk = malloc(31); free(chunk); return 0;} Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.setCompilers/libconftest.so -shared /tmp/petsc-zrcSd3/config.setCompilers/conftest.o Shared linking does not require an explicit libc reference ================================================================================ TEST checkDynamicLinker from config.setCompilers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/setCompilers.py:1580) TESTING: checkDynamicLinker from config.setCompilers(config/BuildSystem/config/setCompilers.py:1580) Check that the linker can dynamicaly load shared libraries Checking for header: dlfcn.h All intermediate test results are stored in /tmp/petsc-zrcSd3/config.headers Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_DLFCN_H" to "1" Checking for functions [dlopen dlsym dlclose] in library ['dl'] [] All intermediate test results are stored in /tmp/petsc-zrcSd3/config.libraries Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.libraries/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.libraries /tmp/petsc-zrcSd3/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dlopen(); static void _check_dlopen() { dlopen(); } char dlsym(); static void _check_dlsym() { dlsym(); } char dlclose(); static void _check_dlclose() { dlclose(); } int main() { _check_dlopen(); _check_dlsym(); _check_dlclose();; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.libraries/conftest /tmp/petsc-zrcSd3/config.libraries/conftest.o -ldl Defined "HAVE_LIBDL" to "1" Adding ['dl'] to LIBS Running Executable WITHOUT threads to time it out Executing: uname -s stdout: Linux Checking dynamic linker mpicc using flags ['-shared'] Checking for program /sw/sources/lsf-tools/2.0/summit/bin/mpicc...not found Checking for program /sw/summit/xalt/1.2.0/bin/mpicc...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/bin/mpicc...found Defined make macro "DYNAMICLINKER" to "mpicc" Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.setCompilers /tmp/petsc-zrcSd3/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.setCompilers/conftest -shared /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -ldl Valid C linker flag -shared Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.setCompilers /tmp/petsc-zrcSd3/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int foo(void) {printf("test");return 0;} Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.setCompilers/libconftest.so -shared /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -ldl Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.setCompilers /tmp/petsc-zrcSd3/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include int main() { void *handle = dlopen("/tmp/petsc-zrcSd3/config.setCompilers/libconftest.so", 0); int (*foo)(void) = (int (*)(void)) dlsym(handle, "foo"); if (!foo) { printf("Could not load symbol\n"); return -1; } if ((*foo)()) { printf("Invalid return from foo()\n"); return -1; } if (dlclose(handle)) { printf("Could not close library\n"); return -1; } ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.setCompilers/conftest /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -ldl Using dynamic linker mpicc with flags ['-shared'] and library extension so ================================================================================ TEST output from config.setCompilers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/setCompilers.py:1629) TESTING: output from config.setCompilers(config/BuildSystem/config/setCompilers.py:1629) Output module data as defines and substitutions Substituting "CC" with "mpicc" Substituting "CFLAGS" with "" Defined make macro "CC_LINKER_SLFLAG" to "-Wl,-rpath," Substituting "CPP" with "mpicc -E" Substituting "CPPFLAGS" with "" Substituting "CUDAC" with "nvcc" Substituting "CUDAFLAGS" with "-ccbin pgc++" Substituting "CUDAPP" with "nvcc -E" Substituting "CUDAPPFLAGS" with "-Wno-deprecated-gpu-targets" Substituting "CXX" with "mpiCC" Substituting "CXX_CXXFLAGS" with "" Substituting "CXXFLAGS" with "" Substituting "CXX_LINKER_SLFLAG" with "-Wl,-rpath," Substituting "CXXPP" with "mpiCC -E" Substituting "CXXPPFLAGS" with "" Substituting "FC" with "mpif90" Substituting "FFLAGS" with "" Defined make macro "FC_LINKER_SLFLAG" to "-Wl,-rpath," Substituting "LDFLAGS" with "" Substituting "LIBS" with "-ldl " Substituting "SHARED_LIBRARY_FLAG" with "-shared" child config.setCompilers 30.443175 ================================================================================ TEST checkSharedDynamicPicOptions from PETSc.options.sharedLibraries(/autofs/nccs-svm1_home1/adams/petsc_install/config/PETSc/options/sharedLibraries.py:36) TESTING: checkSharedDynamicPicOptions from PETSc.options.sharedLibraries(config/PETSc/options/sharedLibraries.py:36) ================================================================================ TEST configureSharedLibraries from PETSc.options.sharedLibraries(/autofs/nccs-svm1_home1/adams/petsc_install/config/PETSc/options/sharedLibraries.py:52) TESTING: configureSharedLibraries from PETSc.options.sharedLibraries(config/PETSc/options/sharedLibraries.py:52) Checks whether shared libraries should be used, for which you must - Specify --with-shared-libraries - Have found a working shared linker Defines PETSC_USE_SHARED_LIBRARIES if they are used Running Executable WITHOUT threads to time it out Executing: uname -s stdout: Linux Defined make rule "shared_arch" with dependencies "shared_linux" and code [] Defined make macro "SONAME_FUNCTION" to "$(1).so.$(2)" Defined make macro "SL_LINKER_FUNCTION" to "-shared -Wl,-soname,$(call SONAME_FUNCTION,$(notdir $(1)),$(2))" Defined make macro "BUILDSHAREDLIB" to "yes" Defined "USE_SHARED_LIBRARIES" to "1" ================================================================================ TEST configureDynamicLibraries from PETSc.options.sharedLibraries(/autofs/nccs-svm1_home1/adams/petsc_install/config/PETSc/options/sharedLibraries.py:94) TESTING: configureDynamicLibraries from PETSc.options.sharedLibraries(config/PETSc/options/sharedLibraries.py:94) Checks whether dynamic loading is available (with dlfcn.h and libdl) Defined "HAVE_DYNAMIC_LIBRARIES" to "1" ================================================================================ TEST configureSerializedFunctions from PETSc.options.sharedLibraries(/autofs/nccs-svm1_home1/adams/petsc_install/config/PETSc/options/sharedLibraries.py:100) TESTING: configureSerializedFunctions from PETSc.options.sharedLibraries(config/PETSc/options/sharedLibraries.py:100) Defines PETSC_SERIALIZE_FUNCTIONS if they are used Requires shared libraries child PETSc.options.sharedLibraries 0.010171 ================================================================================ TEST configureIndexSize from PETSc.options.indexTypes(/autofs/nccs-svm1_home1/adams/petsc_install/config/PETSc/options/indexTypes.py:39) TESTING: configureIndexSize from PETSc.options.indexTypes(config/PETSc/options/indexTypes.py:39) Defined "USE_64BIT_INDICES" to "1" Checking for functions [__floatdidf] in library ['-lgcc_s.1'] [] Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.libraries/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.libraries /tmp/petsc-zrcSd3/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char __floatdidf(); static void _check___floatdidf() { __floatdidf(); } int main() { _check___floatdidf();; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.libraries/conftest /tmp/petsc-zrcSd3/config.libraries/conftest.o -lgcc_s.1 -ldl Possible ERROR while running linker: exit code 2 stderr: /usr/bin/ld: cannot find -lgcc_s.1 Defined make macro "PETSC_INDEX_SIZE" to "64" child PETSc.options.indexTypes 0.829832 ================================================================================ TEST configureCompilerFlags from config.compilerFlags(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/compilerFlags.py:72) TESTING: configureCompilerFlags from config.compilerFlags(config/BuildSystem/config/compilerFlags.py:72) Get the default compiler flags Defined make macro "C_VERSION" to "pgcc 19.9-0 linuxpower target on Linuxpower " Defined make macro "MPICC_SHOW" to "pgcc -I/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/include -lpthread -L/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib -lmpiprofilesupport -lmpi_ibm" Trying C compiler flag -g -fast Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.libraries -g -fast /tmp/petsc-zrcSd3/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Added C compiler flag -g -fast Defined make macro "Cxx_VERSION" to "pgc++ 19.9-0 linuxpower target on Linuxpower " Defined make macro "MPICXX_SHOW" to "pgc++ -I/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/include -lpthread -L/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib -lmpiprofilesupport -lmpi_ibm" Trying Cxx compiler flag -g -fast Running Executable WITHOUT threads to time it out Executing: mpiCC -c -o /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers -g -fast /tmp/petsc-zrcSd3/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Added Cxx compiler flag -g -fast Defined make macro "FC_VERSION" to "pgfortran 19.9-0 linuxpower target on Linuxpower " Defined make macro "MPIFC_SHOW" to "pgfortran -I/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/include -lpthread -I/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib/PGI -L/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib -lmpiprofilesupport -lmpi_ibm_usempi -lmpi_ibm_mpifh -lmpi_ibm" Trying FC compiler flag -g -fast Running Executable WITHOUT threads to time it out Executing: mpif90 -c -o /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers -g -fast /tmp/petsc-zrcSd3/config.setCompilers/conftest.F90 Successful compile: Source: program main end Added FC compiler flag -g -fast Defined make macro "CUDA_VERSION" to "nvcc: NVIDIA (R) Cuda compiler driver" Ignoring default options which were overridden using --CUDAFLAGS -ccbin pgc++ Defined make macro "MPICC_SHOW" to "Unavailable" Trying CUDA compiler flag -O Running Executable WITHOUT threads to time it out Executing: nvcc -c -o /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers -ccbin pgc++ -O -Wno-deprecated-gpu-targets /tmp/petsc-zrcSd3/config.setCompilers/conftest.cu Possible ERROR while running compiler: exit code 1 stderr: nvcc fatal : '-Wno-deprecated-gpu-targets': expected a number Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejecting compiler flag -O due to nonzero status from link Rejecting compiler flag -O due to nvcc fatal : '-Wno-deprecated-gpu-targets': expected a number PETSc Error: No output file produced Rejected CUDA compiler flag -O child config.compilerFlags 1.638079 Running Executable WITHOUT threads to time it out Executing: mpicc --help | head -n 20 ================================================================================ TEST checkRestrict from config.compilers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/compilers.py:138) TESTING: checkRestrict from config.compilers(config/BuildSystem/config/compilers.py:138) Check for the C/CXX restrict keyword Running Executable WITHOUT threads to time it out Executing: mpicc -V stdout: pgcc 19.9-0 linuxpower target on Linuxpower PGI Compilers and Tools Copyright (c) 2019, NVIDIA CORPORATION. All rights reserved. All intermediate test results are stored in /tmp/petsc-zrcSd3/config.compilers Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.compilers/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.libraries -g -fast /tmp/petsc-zrcSd3/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { float * __restrict x;; return 0; } compilers: Set C restrict keyword to __restrict Defined "C_RESTRICT" to "__restrict" ================================================================================ TEST checkCFormatting from config.compilers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/compilers.py:391) TESTING: checkCFormatting from config.compilers(config/BuildSystem/config/compilers.py:391) Activate format string checking if using the GNU compilers ================================================================================ TEST checkCInline from config.compilers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/compilers.py:108) TESTING: checkCInline from config.compilers(config/BuildSystem/config/compilers.py:108) Check for C inline keyword Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.compilers/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.compilers -g -fast /tmp/petsc-zrcSd3/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" static inline int foo(int a) {return a;} int main() { foo(1);; return 0; } compilers: Set C Inline keyword to inline Defined "C_INLINE" to "inline" ================================================================================ TEST checkDynamicLoadFlag from config.compilers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/compilers.py:402) TESTING: checkDynamicLoadFlag from config.compilers(config/BuildSystem/config/compilers.py:402) Checks that dlopen() takes RTLD_XXX, and defines PETSC_HAVE_RTLD_XXX if it does Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.compilers/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.compilers -g -fast /tmp/petsc-zrcSd3/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include char *libname; int main() { dlopen(libname, RTLD_LAZY);dlopen(libname, RTLD_NOW);dlopen(libname, RTLD_LOCAL);dlopen(libname, RTLD_GLOBAL); ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.compilers/conftest -g -fast /tmp/petsc-zrcSd3/config.compilers/conftest.o -ldl Defined "HAVE_RTLD_LAZY" to "1" Defined "HAVE_RTLD_NOW" to "1" Defined "HAVE_RTLD_LOCAL" to "1" Defined "HAVE_RTLD_GLOBAL" to "1" ================================================================================ TEST checkCLibraries from config.compilers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/compilers.py:202) TESTING: checkCLibraries from config.compilers(config/BuildSystem/config/compilers.py:202) Determines the libraries needed to link with C compiled code Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.compilers/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.compilers -g -fast /tmp/petsc-zrcSd3/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include void asub(void) {char s[16];printf("testing %s",s);} Running Executable WITHOUT threads to time it out Executing: mpif90 -c -o /tmp/petsc-zrcSd3/config.compilers/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -g -fast /tmp/petsc-zrcSd3/config.compilers/conftest.F90 Successful compile: Source: program main print*,'testing' stop end Running Executable WITHOUT threads to time it out Executing: mpif90 -o /tmp/petsc-zrcSd3/config.compilers/conftest -g -fast /tmp/petsc-zrcSd3/config.compilers/conftest.o /tmp/petsc-zrcSd3/config.compilers/confc.o -ldl C libraries are not needed when using Fortran linker Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.compilers/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.compilers -g -fast /tmp/petsc-zrcSd3/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include void asub(void) {char s[16];printf("testing %s",s);} Running Executable WITHOUT threads to time it out Executing: mpiCC -c -o /tmp/petsc-zrcSd3/config.compilers/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -g -fast /tmp/petsc-zrcSd3/config.compilers/conftest.cc Possible ERROR while running compiler: stderr: "/tmp/petsc-zrcSd3/config.compilers/conftest.cc", line 5: warning: last line of file ends without a newline ^ Source: #include "confdefs.h" #include "conffix.h" int main(int argc,char **args) {return 0;} Running Executable WITHOUT threads to time it out Executing: mpiCC -o /tmp/petsc-zrcSd3/config.compilers/conftest -g -fast /tmp/petsc-zrcSd3/config.compilers/conftest.o /tmp/petsc-zrcSd3/config.compilers/confc.o -ldl C libraries are not needed when using C++ linker ================================================================================ TEST checkDependencyGenerationFlag from config.compilers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/compilers.py:1345) TESTING: checkDependencyGenerationFlag from config.compilers(config/BuildSystem/config/compilers.py:1345) Check if -MMD works for dependency generation, and add it if it does Trying C compiler flag -MMD -MP Rejected C compiler flag -MMD -MP Trying C compiler flag -MMD Rejected C compiler flag -MMD because no dependency file (/tmp/petsc-zrcSd3/config.setCompilers/conftest.d) was generated Trying C compiler flag -xMMD Rejected C compiler flag -xMMD Trying C compiler flag -qmakedep=gcc Rejected C compiler flag -qmakedep=gcc Trying C compiler flag -MD Rejected C compiler flag -MD because no dependency file (/tmp/petsc-zrcSd3/config.setCompilers/conftest.d) was generated Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -g -fast -MMD -MP /tmp/petsc-zrcSd3/config.setCompilers/conftest.c Possible ERROR while running compiler: exit code 1 stderr: pgcc-Error-Unknown switch: -MP Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejecting compiler flag -MMD -MP due to nonzero status from link Rejecting compiler flag -MMD -MP due to pgcc-Error-Unknown switch: -MP PETSc Error: No output file produced Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -g -fast -MMD /tmp/petsc-zrcSd3/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -g -fast -xMMD /tmp/petsc-zrcSd3/config.setCompilers/conftest.c Possible ERROR while running compiler: exit code 1 stderr: pgcc-Error-Unknown switch: -xMMD Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejecting compiler flag -xMMD due to nonzero status from link Rejecting compiler flag -xMMD due to pgcc-Error-Unknown switch: -xMMD PETSc Error: No output file produced Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -g -fast -qmakedep=gcc /tmp/petsc-zrcSd3/config.setCompilers/conftest.c Possible ERROR while running compiler: exit code 1 stderr: pgcc-Error-Unknown switch: -qmakedep=gcc Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejecting compiler flag -qmakedep=gcc due to nonzero status from link Rejecting compiler flag -qmakedep=gcc due to pgcc-Error-Unknown switch: -qmakedep=gcc PETSc Error: No output file produced Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -g -fast -MD /tmp/petsc-zrcSd3/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Trying Cxx compiler flag -MMD -MP Rejected Cxx compiler flag -MMD -MP Trying Cxx compiler flag -MMD Rejected Cxx compiler flag -MMD because no dependency file (/tmp/petsc-zrcSd3/config.setCompilers/conftest.d) was generated Trying Cxx compiler flag -xMMD Rejected Cxx compiler flag -xMMD Trying Cxx compiler flag -qmakedep=gcc Rejected Cxx compiler flag -qmakedep=gcc Trying Cxx compiler flag -MD Rejected Cxx compiler flag -MD because no dependency file (/tmp/petsc-zrcSd3/config.setCompilers/conftest.d) was generated Running Executable WITHOUT threads to time it out Executing: mpiCC -c -o /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.setCompilers -g -fast -MMD -MP /tmp/petsc-zrcSd3/config.setCompilers/conftest.cc Possible ERROR while running compiler: exit code 1 stderr: pgc++-Error-Unknown switch: -MP Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejecting compiler flag -MMD -MP due to nonzero status from link Rejecting compiler flag -MMD -MP due to pgc++-Error-Unknown switch: -MP PETSc Error: No output file produced Running Executable WITHOUT threads to time it out Executing: mpiCC -c -o /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.setCompilers -g -fast -MMD /tmp/petsc-zrcSd3/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpiCC -c -o /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.setCompilers -g -fast -xMMD /tmp/petsc-zrcSd3/config.setCompilers/conftest.cc Possible ERROR while running compiler: exit code 1 stderr: pgc++-Error-Unknown switch: -xMMD Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejecting compiler flag -xMMD due to nonzero status from link Rejecting compiler flag -xMMD due to pgc++-Error-Unknown switch: -xMMD PETSc Error: No output file produced Running Executable WITHOUT threads to time it out Executing: mpiCC -c -o /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.setCompilers -g -fast -qmakedep=gcc /tmp/petsc-zrcSd3/config.setCompilers/conftest.cc Possible ERROR while running compiler: exit code 1 stderr: pgc++-Error-Unknown switch: -qmakedep=gcc Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejecting compiler flag -qmakedep=gcc due to nonzero status from link Rejecting compiler flag -qmakedep=gcc due to pgc++-Error-Unknown switch: -qmakedep=gcc PETSc Error: No output file produced Running Executable WITHOUT threads to time it out Executing: mpiCC -c -o /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.setCompilers -g -fast -MD /tmp/petsc-zrcSd3/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Trying CUDA compiler flag -MMD -MP Rejected CUDA compiler flag -MMD -MP Trying CUDA compiler flag -MMD Rejected CUDA compiler flag -MMD Trying CUDA compiler flag -xMMD Rejected CUDA compiler flag -xMMD Trying CUDA compiler flag -qmakedep=gcc Rejected CUDA compiler flag -qmakedep=gcc Trying CUDA compiler flag -MD Rejected CUDA compiler flag -MD Running Executable WITHOUT threads to time it out Executing: nvcc -c -o /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers -ccbin pgc++ -MMD -MP -Wno-deprecated-gpu-targets /tmp/petsc-zrcSd3/config.setCompilers/conftest.cu Possible ERROR while running compiler: exit code 1 stderr: nvcc fatal : Unknown option 'MMD' Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejecting compiler flag -MMD -MP due to nonzero status from link Rejecting compiler flag -MMD -MP due to nvcc fatal : Unknown option 'MMD' PETSc Error: No output file produced Running Executable WITHOUT threads to time it out Executing: nvcc -c -o /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers -ccbin pgc++ -MMD -Wno-deprecated-gpu-targets /tmp/petsc-zrcSd3/config.setCompilers/conftest.cu Possible ERROR while running compiler: exit code 1 stderr: nvcc fatal : Unknown option 'MMD' Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejecting compiler flag -MMD due to nonzero status from link Rejecting compiler flag -MMD due to nvcc fatal : Unknown option 'MMD' PETSc Error: No output file produced Running Executable WITHOUT threads to time it out Executing: nvcc -c -o /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers -ccbin pgc++ -xMMD -Wno-deprecated-gpu-targets /tmp/petsc-zrcSd3/config.setCompilers/conftest.cu Possible ERROR while running compiler: exit code 1 stderr: nvcc fatal : Unknown option 'xMMD' Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejecting compiler flag -xMMD due to nonzero status from link Rejecting compiler flag -xMMD due to nvcc fatal : Unknown option 'xMMD' PETSc Error: No output file produced Running Executable WITHOUT threads to time it out Executing: nvcc -c -o /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers -ccbin pgc++ -qmakedep=gcc -Wno-deprecated-gpu-targets /tmp/petsc-zrcSd3/config.setCompilers/conftest.cu Possible ERROR while running compiler: exit code 1 stderr: nvcc fatal : Unknown option 'qmakedep' Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejecting compiler flag -qmakedep=gcc due to nonzero status from link Rejecting compiler flag -qmakedep=gcc due to nvcc fatal : Unknown option 'qmakedep' PETSc Error: No output file produced Running Executable WITHOUT threads to time it out Executing: nvcc -c -o /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers -ccbin pgc++ -MD -Wno-deprecated-gpu-targets /tmp/petsc-zrcSd3/config.setCompilers/conftest.cu Possible ERROR while running compiler: exit code 1 stderr: nvcc fatal : Unknown option 'MD' Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejecting compiler flag -MD due to nonzero status from link Rejecting compiler flag -MD due to nvcc fatal : Unknown option 'MD' PETSc Error: No output file produced ================================================================================ TEST checkC99Flag from config.compilers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/compilers.py:1390) TESTING: checkC99Flag from config.compilers(config/BuildSystem/config/compilers.py:1390) Check for -std=c99 or equivalent flag Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -g -fast /tmp/petsc-zrcSd3/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { float x[2],y; y = FLT_ROUNDS; // c++ comment int j = 2; for (int i=0; i<2; i++){ x[i] = i*j*y; } ; return 0; } Accepted C99 compile flag: Defined "HAVE_C99" to "1" Running Executable WITHOUT threads to time it out Executing: mpiCC --help | head -n 20 ================================================================================ TEST checkRestrict from config.compilers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/compilers.py:138) TESTING: checkRestrict from config.compilers(config/BuildSystem/config/compilers.py:138) Check for the C/CXX restrict keyword Running Executable WITHOUT threads to time it out Executing: mpicc -V stdout: pgcc 19.9-0 linuxpower target on Linuxpower PGI Compilers and Tools Copyright (c) 2019, NVIDIA CORPORATION. All rights reserved. Running Executable WITHOUT threads to time it out Executing: mpiCC -c -o /tmp/petsc-zrcSd3/config.compilers/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -g -fast /tmp/petsc-zrcSd3/config.compilers/conftest.cc Possible ERROR while running compiler: stderr: "/tmp/petsc-zrcSd3/config.compilers/conftest.cc", line 5: warning: variable "x" was declared but never referenced float * __restrict x;; ^ Source: #include "confdefs.h" #include "conffix.h" int main() { float * __restrict x;; return 0; } compilers: Set Cxx restrict keyword to __restrict Defined "CXX_RESTRICT" to "__restrict" ================================================================================ TEST checkCxxOptionalExtensions from config.compilers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/compilers.py:421) TESTING: checkCxxOptionalExtensions from config.compilers(config/BuildSystem/config/compilers.py:421) Check whether the C++ compiler (IBM xlC, OSF5) need special flag for .c files which contain C++ Running Executable WITHOUT threads to time it out Executing: mpiCC -c -o /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -g -fast /tmp/petsc-zrcSd3/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { class somename { int i; };; return 0; } ================================================================================ TEST checkCxxInline from config.compilers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/compilers.py:123) TESTING: checkCxxInline from config.compilers(config/BuildSystem/config/compilers.py:123) Check for C++ inline keyword Running Executable WITHOUT threads to time it out Executing: mpiCC -c -o /tmp/petsc-zrcSd3/config.compilers/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -g -fast /tmp/petsc-zrcSd3/config.compilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" static inline int foo(int a) {return a;} int main() { foo(1);; return 0; } compilers: Set Cxx Inline keyword to inline Defined "CXX_INLINE" to "inline" ================================================================================ TEST checkCxxLibraries from config.compilers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/compilers.py:533) TESTING: checkCxxLibraries from config.compilers(config/BuildSystem/config/compilers.py:533) Determines the libraries needed to link with C++ from C and Fortran Running Executable WITHOUT threads to time it out Executing: mpiCC -c -o /tmp/petsc-zrcSd3/config.compilers/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -g -fast /tmp/petsc-zrcSd3/config.compilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include void asub(void) {std::vector v; try { throw 20; } catch (int e) { std::cout << "An exception occurred"; }} Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.compilers/conftest.o -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -g -fast /tmp/petsc-zrcSd3/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main(int argc,char **args) {return 0;} Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.compilers/conftest -g -fast /tmp/petsc-zrcSd3/config.compilers/conftest.o /tmp/petsc-zrcSd3/config.compilers/confc.o -ldl Possible ERROR while running linker: exit code 2 stderr: /tmp/petsc-zrcSd3/config.compilers/confc.o: In function `asub()': /tmp/petsc-zrcSd3/config.compilers/conftest.cc:7: undefined reference to `__cxa_allocate_exception' /tmp/petsc-zrcSd3/config.compilers/conftest.cc:7: undefined reference to `__cxa_throw' /tmp/petsc-zrcSd3/config.compilers/conftest.cc:7: undefined reference to `__cxa_get_exception_ptr' /tmp/petsc-zrcSd3/config.compilers/conftest.cc:7: undefined reference to `__cxa_begin_catch' /tmp/petsc-zrcSd3/config.compilers/conftest.cc:535: undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /tmp/petsc-zrcSd3/config.compilers/conftest.cc:7: undefined reference to `__cxa_end_catch' /tmp/petsc-zrcSd3/config.compilers/conftest.cc:7: undefined reference to `__cxa_end_catch' /tmp/petsc-zrcSd3/config.compilers/confc.o: In function `__sti___46__tmp_petsc_zrcSd3_config_compilers_conftest_cc__Z4asubv': /tmp/petsc-zrcSd3/config.compilers/conftest.cc:74: undefined reference to `std::ios_base::Init::Init()' /tmp/petsc-zrcSd3/config.compilers/confc.o:(.data+0x0): undefined reference to `typeinfo for int' /tmp/petsc-zrcSd3/config.compilers/confc.o:(.toc+0x0): undefined reference to `typeinfo for int' /tmp/petsc-zrcSd3/config.compilers/confc.o:(.toc+0x8): undefined reference to `std::cout' /tmp/petsc-zrcSd3/config.compilers/confc.o:(.toc+0x10): undefined reference to `std::ios_base::Init::~Init()' /tmp/petsc-zrcSd3/config.compilers/confc.o:(.data.DW.ref.__gxx_personality_v0[DW.ref.__gxx_personality_v0]+0x0): undefined reference to `__gxx_personality_v0' /usr/bin/ld: link errors found, deleting executable `/tmp/petsc-zrcSd3/config.compilers/conftest' Running Executable WITHOUT threads to time it out Executing: uname -s stdout: Linux Running Executable WITHOUT threads to time it out Executing: mpiCC -c -o /tmp/petsc-zrcSd3/config.compilers/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -g -fast /tmp/petsc-zrcSd3/config.compilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include void asub(void) {std::vector v; try { throw 20; } catch (int e) { std::cout << "An exception occurred"; }} Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.compilers/conftest.o -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -g -fast /tmp/petsc-zrcSd3/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main(int argc,char **args) {return 0;} Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.compilers/conftest -g -fast /tmp/petsc-zrcSd3/config.compilers/conftest.o /tmp/petsc-zrcSd3/config.compilers/confc.o -lstdc++ -ldl compilers: C++ requires -lstdc++ to link with C compiler Running Executable WITHOUT threads to time it out Executing: mpiCC -c -o /tmp/petsc-zrcSd3/config.compilers/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -g -fast /tmp/petsc-zrcSd3/config.compilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include void asub(void) {std::vector v; try { throw 20; } catch (int e) { std::cout << "An exception occurred"; }} Running Executable WITHOUT threads to time it out Executing: mpif90 -c -o /tmp/petsc-zrcSd3/config.compilers/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -g -fast /tmp/petsc-zrcSd3/config.compilers/conftest.F90 Successful compile: Source: program main print*,'testing' stop end Running Executable WITHOUT threads to time it out Executing: mpif90 -o /tmp/petsc-zrcSd3/config.compilers/conftest -g -fast /tmp/petsc-zrcSd3/config.compilers/conftest.o /tmp/petsc-zrcSd3/config.compilers/confc.o -lstdc++ -ldl C++ libraries are not needed when using FC linker ================================================================================ TEST checkCxxDialect from config.compilers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/compilers.py:449) TESTING: checkCxxDialect from config.compilers(config/BuildSystem/config/compilers.py:449) Determine the Cxx dialect supported by the compiler [and correspoding compiler option - if any]. -with-cxx-dialect can take options: auto: use highest dialect configure can determine cxx17: [future?] cxx14: gnu++14 or c++14 cxx11: gnu++11 or c++11 0: disable CxxDialect check and use compiler default checkCxxDialect: checking CXX11 with flag: Running Executable WITHOUT threads to time it out Executing: mpiCC -c -o /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -g -fast /tmp/petsc-zrcSd3/config.setCompilers/conftest.cc Possible ERROR while running compiler: exit code 2 stderr: "/usr/lib/gcc/ppc64le-redhat-linux/4.8.5/../../../../include/c++/4.8.5/bits/c++ 0x_warning.h", line 32: catastrophic error: #error directive: This file requires compiler and library support for the ISO C++ 2011 standard. This support is currently experimental, and must be enabled with the -std=c++11 or -std=gnu++11 compiler options. #error This file requires compiler and library support for the \ ^ 1 catastrophic error detected in the compilation of "/tmp/petsc-zrcSd3/config.setCompilers/conftest.cc". Compilation terminated. Source: #include "confdefs.h" #include "conffix.h" #include #include #include template constexpr T Cubed( T x ) { return x*x*x; } int main() { std::random_device rd; std::mt19937 mt(rd()); std::normal_distribution dist(0,1); const double x = dist(mt); std::cout << x; ; return 0; } Rejecting compiler flag due to nonzero status from link Rejecting compiler flag due to "/usr/lib/gcc/ppc64le-redhat-linux/4.8.5/../../../../include/c++/4.8.5/bits/c++ 0x_warning.h", line 32: catastrophic error: #error directive: This file requires compiler and library support for the ISO C++ 2011 standard. This support is currently experimental, and must be enabled with the -std=c++11 or -std=gnu++11 compiler options. #error This file requires compiler and library support for the \ ^ 1 catastrophic error detected in the compilation of "/tmp/petsc-zrcSd3/config.setCompilers/conftest.cc". Compilation terminated. PETSc Error: No output file produced checkCxxDialect: checking CXX11 with flag: -std=c++11 Defined "HAVE_CXX_DIALECT_CXX11" to "1" Running Executable WITHOUT threads to time it out Executing: mpiCC -c -o /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -g -fast -std=c++11 /tmp/petsc-zrcSd3/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #include template constexpr T Cubed( T x ) { return x*x*x; } int main() { std::random_device rd; std::mt19937 mt(rd()); std::normal_distribution dist(0,1); const double x = dist(mt); std::cout << x; ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpiCC -V stdout: pgc++ 19.9-0 linuxpower target on Linuxpower PGI Compilers and Tools Copyright (c) 2019, NVIDIA CORPORATION. All rights reserved. ================================================================================ TEST checkFortranNameMangling from config.compilers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/compilers.py:838) TESTING: checkFortranNameMangling from config.compilers(config/BuildSystem/config/compilers.py:838) Checks Fortran name mangling, and defines HAVE_FORTRAN_UNDERSCORE, HAVE_FORTRAN_NOUNDERSCORE, HAVE_FORTRAN_CAPS, or HAVE_FORTRAN_STDCALL Testing Fortran mangling type underscore with code void d1chk_(void){return;} Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.compilers/conftest.o -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -g -fast /tmp/petsc-zrcSd3/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" void d1chk_(void){return;} Running Executable WITHOUT threads to time it out Executing: mpif90 -c -o /tmp/petsc-zrcSd3/config.compilers/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -g -fast /tmp/petsc-zrcSd3/config.compilers/conftest.F90 Successful compile: Source: program main call d1chk() end Running Executable WITHOUT threads to time it out Executing: mpif90 -o /tmp/petsc-zrcSd3/config.compilers/conftest -g -fast /tmp/petsc-zrcSd3/config.compilers/conftest.o /tmp/petsc-zrcSd3/config.compilers/confc.o -lstdc++ -ldl compilers: Fortran name mangling is underscore Defined "HAVE_FORTRAN_UNDERSCORE" to "1" Running Executable WITHOUT threads to time it out Executing: mpif90 --version stdout: pgfortran 19.9-0 linuxpower target on Linuxpower PGI Compilers and Tools Copyright (c) 2019, NVIDIA CORPORATION. All rights reserved. Defined "FORTRAN_CHARLEN_T" to "int" ================================================================================ TEST checkFortranNameManglingDouble from config.compilers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/compilers.py:879) TESTING: checkFortranNameManglingDouble from config.compilers(config/BuildSystem/config/compilers.py:879) Checks if symbols containing an underscore append an extra underscore, and defines HAVE_FORTRAN_UNDERSCORE_UNDERSCORE if necessary Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.compilers/conftest.o -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -g -fast /tmp/petsc-zrcSd3/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" void d1_chk__(void){return;} Running Executable WITHOUT threads to time it out Executing: mpif90 -c -o /tmp/petsc-zrcSd3/config.compilers/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -g -fast /tmp/petsc-zrcSd3/config.compilers/conftest.F90 Successful compile: Source: program main call d1_chk() end Running Executable WITHOUT threads to time it out Executing: mpif90 -o /tmp/petsc-zrcSd3/config.compilers/conftest -g -fast /tmp/petsc-zrcSd3/config.compilers/conftest.o /tmp/petsc-zrcSd3/config.compilers/confc.o -lstdc++ -ldl Possible ERROR while running linker: exit code 2 stderr: /tmp/petsc-zrcSd3/config.compilers/conftest.o: In function `MAIN_': /tmp/petsc-zrcSd3/config.compilers/conftest.F90:2: undefined reference to `d1_chk_' /usr/bin/ld: link errors found, deleting executable `/tmp/petsc-zrcSd3/config.compilers/conftest' ================================================================================ TEST checkFortranLibraries from config.compilers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/compilers.py:889) TESTING: checkFortranLibraries from config.compilers(config/BuildSystem/config/compilers.py:889) Substitutes for FLIBS the libraries needed to link with Fortran This macro is intended to be used in those situations when it is necessary to mix, e.g. C++ and Fortran 77, source code into a single program or shared library. For example, if object files from a C++ and Fortran 77 compiler must be linked together, then the C++ compiler/linker must be used for linking (since special C++-ish things need to happen at link time like calling global constructors, instantiating templates, enabling exception support, etc.). However, the Fortran 77 intrinsic and run-time libraries must be linked in as well, but the C++ compiler/linker does not know how to add these Fortran 77 libraries. This code was translated from the autoconf macro which was packaged in its current form by Matthew D. Langston . However, nearly all of this macro came from the OCTAVE_FLIBS macro in octave-2.0.13/aclocal.m4, and full credit should go to John W. Eaton for writing this extremely useful macro. Running Executable WITHOUT threads to time it out Executing: mpif90 -c -o /tmp/petsc-zrcSd3/config.compilers/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -g -fast /tmp/petsc-zrcSd3/config.compilers/conftest.F90 Successful compile: Source: program main #include call MPI_Allreduce() end Running Executable WITHOUT threads to time it out Executing: mpif90 -o /tmp/petsc-zrcSd3/config.compilers/conftest -g -fast /tmp/petsc-zrcSd3/config.compilers/conftest.o -lstdc++ -ldl Running Executable WITHOUT threads to time it out Executing: mpif90 -c -o /tmp/petsc-zrcSd3/config.compilers/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -g -fast /tmp/petsc-zrcSd3/config.compilers/conftest.F90 Successful compile: Source: subroutine asub() print*,'testing' call MPI_Allreduce() return end Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.compilers/conftest.o -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -g -fast /tmp/petsc-zrcSd3/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main(int argc,char **args) {return 0;} Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.compilers/conftest -g -fast /tmp/petsc-zrcSd3/config.compilers/conftest.o /tmp/petsc-zrcSd3/config.compilers/confc.o -lstdc++ -ldl Possible ERROR while running linker: exit code 2 stderr: /tmp/petsc-zrcSd3/config.compilers/confc.o: In function `asub_': /tmp/petsc-zrcSd3/config.compilers/conftest.F90:2: undefined reference to `pgf90io_src_info03a' /tmp/petsc-zrcSd3/config.compilers/conftest.F90:2: undefined reference to `pgf90io_print_init' /tmp/petsc-zrcSd3/config.compilers/conftest.F90:2: undefined reference to `pgf90io_sc_ch_ldw' /tmp/petsc-zrcSd3/config.compilers/conftest.F90:2: undefined reference to `pgf90io_ldw_end' /tmp/petsc-zrcSd3/config.compilers/conftest.F90:3: undefined reference to `mpi_allreduce_' /usr/bin/ld: link errors found, deleting executable `/tmp/petsc-zrcSd3/config.compilers/conftest' Fortran code cannot directly be linked with C linker, therefore will determine needed Fortran libraries Running Executable WITHOUT threads to time it out Executing: mpif90 -c -o /tmp/petsc-zrcSd3/config.compilers/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -g -fast /tmp/petsc-zrcSd3/config.compilers/conftest.F90 Successful compile: Source: program main end Running Executable WITHOUT threads to time it out Executing: mpif90 -o /tmp/petsc-zrcSd3/config.compilers/conftest -v -g -fast /tmp/petsc-zrcSd3/config.compilers/conftest.o -lstdc++ -ldl Possible ERROR while running linker: stderr: Export PGI_CURR_CUDA_HOME=/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/2019/cuda/ Export PGI=/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc /sw/summit/xalt/1.2.0/bin/ld /usr/lib64/crt1.o /usr/lib64/crti.o /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib/trace_init.o /usr/lib/gcc/ppc64le-redhat-linux/4.8.5/crtbegin.o /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib/f90main.o -dynamic-linker /lib64/ld64.so.2 /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib/pgi.ld --no-tls-optimize -L/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib -L/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -L/usr/lib64 -L/usr/lib/gcc/ppc64le-redhat-linux/4.8.5 /tmp/petsc-zrcSd3/config.compilers/conftest.o -lstdc++ -ldl -lpthread -lmpiprofilesupport -lmpi_ibm_usempi -lmpi_ibm_mpifh -lmpi_ibm -rpath /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -o /tmp/petsc-zrcSd3/config.compilers/conftest -L/usr/lib/gcc/ppc64le-redhat-linux/4.8.5/../../../../lib64 -lpgf90rtl -lpgf90 -lpgf90_rpm1 -lpgf902 -lpgf90rtl -lpgftnrtl -as-needed -latomic -no-as-needed -lpgkomp -lomp -as-needed -lomptarget -no-as-needed -ldl -lpthread --start-group -lpgmath -lpgc --end-group -lrt -lpthread -lmass_simdp9 -lmassvp9 -lmassp9 -lm -lgcc --as-needed -lgcc_s --no-as-needed -lc -lgcc --as-needed -lgcc_s --no-as-needed /usr/lib/gcc/ppc64le-redhat-linux/4.8.5/crtend.o /usr/lib64/crtn.o Adding -lpgftnrtl before -lpgf90rtl in librarylist Defined "HAVE_PGF90_COMPILER" to "1" compilers: Checking arg Export compilers: Unknown arg Export compilers: Checking arg PGI_CURR_CUDA_HOME=/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/2019/cuda/ compilers: Unknown arg PGI_CURR_CUDA_HOME=/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/2019/cuda/ compilers: Checking arg Export compilers: Unknown arg Export compilers: Checking arg PGI=/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc compilers: Unknown arg PGI=/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc compilers: Checking arg /sw/summit/xalt/1.2.0/bin/ld compilers: Unknown arg /sw/summit/xalt/1.2.0/bin/ld compilers: Checking arg /usr/lib64/crt1.o compilers: Unknown arg /usr/lib64/crt1.o compilers: Checking arg /usr/lib64/crti.o compilers: Unknown arg /usr/lib64/crti.o compilers: Checking arg /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib/trace_init.o compilers: Unknown arg /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib/trace_init.o compilers: Checking arg /usr/lib/gcc/ppc64le-redhat-linux/4.8.5/crtbegin.o compilers: Unknown arg /usr/lib/gcc/ppc64le-redhat-linux/4.8.5/crtbegin.o compilers: Checking arg /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib/f90main.o compilers: Unknown arg /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib/f90main.o compilers: Checking arg -dynamic-linker compilers: Unknown arg -dynamic-linker compilers: Checking arg /lib64/ld64.so.2 compilers: Unknown arg /lib64/ld64.so.2 compilers: Checking arg /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib/pgi.ld Found strange PGI file ending with .ld, adding it compilers: Checking arg --no-tls-optimize compilers: Unknown arg --no-tls-optimize compilers: Checking arg -L/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib compilers: Found library directory: -L/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib compilers: Checking arg -L/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib compilers: Found library directory: -L/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib compilers: Checking arg -L/usr/lib64 compilers: Checking arg -L/usr/lib/gcc/ppc64le-redhat-linux/4.8.5 compilers: Found library directory: -L/usr/lib/gcc/ppc64le-redhat-linux/4.8.5 compilers: Checking arg /tmp/petsc-zrcSd3/config.compilers/conftest.o compilers: Unknown arg /tmp/petsc-zrcSd3/config.compilers/conftest.o compilers: Checking arg -lstdc++ compilers: Found library: -lstdc++ compilers: Checking arg -ldl compilers: Found library: -ldl compilers: Checking arg -lpthread compilers: Found library: -lpthread compilers: Checking arg -lmpiprofilesupport compilers: Found library: -lmpiprofilesupport compilers: Checking arg -lmpi_ibm_usempi compilers: Found library: -lmpi_ibm_usempi compilers: Checking arg -lmpi_ibm_mpifh compilers: Found library: -lmpi_ibm_mpifh compilers: Checking arg -lmpi_ibm compilers: Found library: -lmpi_ibm compilers: Checking arg -rpath compilers: Found -rpath library: /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib compilers: Checking arg -o compilers: Unknown arg -o compilers: Checking arg /tmp/petsc-zrcSd3/config.compilers/conftest compilers: Unknown arg /tmp/petsc-zrcSd3/config.compilers/conftest compilers: Checking arg -L/usr/lib/gcc/ppc64le-redhat-linux/4.8.5/../../../../lib64 compilers: Checking arg -lpgf90rtl compilers: Found library: -lpgf90rtl compilers: Checking arg -lpgf90 compilers: Found library: -lpgf90 compilers: Checking arg -lpgf90_rpm1 compilers: Found library: -lpgf90_rpm1 compilers: Checking arg -lpgf902 compilers: Found library: -lpgf902 compilers: Checking arg -lpgftnrtl compilers: Found library: -lpgftnrtl compilers: Checking arg -lpgf90rtl compilers: Already in lflags: -lpgf90rtl compilers: Checking arg -lpgftnrtl compilers: Already in lflags: -lpgftnrtl compilers: Checking arg -as-needed compilers: Unknown arg -as-needed compilers: Checking arg -latomic compilers: Found library: -latomic compilers: Checking arg -no-as-needed compilers: Unknown arg -no-as-needed compilers: Checking arg -lpgkomp compilers: Found library: -lpgkomp compilers: Checking arg -lomp compilers: Found library: -lomp compilers: Checking arg -as-needed compilers: Unknown arg -as-needed compilers: Checking arg -lomptarget compilers: Found library: -lomptarget compilers: Checking arg -no-as-needed compilers: Unknown arg -no-as-needed compilers: Checking arg -ldl compilers: Already in lflags: -ldl compilers: Checking arg -lpthread compilers: Already in lflags: -lpthread compilers: Checking arg --start-group compilers: Unknown arg --start-group compilers: Checking arg -lpgmath compilers: Found library: -lpgmath compilers: Checking arg -lpgc compilers: Found library: -lpgc compilers: Checking arg --end-group compilers: Unknown arg --end-group compilers: Checking arg -lrt compilers: Found library: -lrt compilers: Checking arg -lpthread compilers: Already in lflags: -lpthread compilers: Checking arg -lmass_simdp9 compilers: Found library: -lmass_simdp9 compilers: Checking arg -lmassvp9 compilers: Found library: -lmassvp9 compilers: Checking arg -lmassp9 compilers: Found library: -lmassp9 compilers: Checking arg -lm compilers: Found library: -lm compilers: Checking arg -lgcc compilers: Found system library therefore skipping: -lgcc compilers: Checking arg --as-needed compilers: Unknown arg --as-needed compilers: Checking arg -lgcc_s compilers: Found library: -lgcc_s compilers: Checking arg --no-as-needed compilers: Unknown arg --no-as-needed compilers: Checking arg -lc compilers: Found system library therefore skipping: -lc compilers: Checking arg -lgcc compilers: Found system library therefore skipping: -lgcc compilers: Checking arg --as-needed compilers: Unknown arg --as-needed compilers: Checking arg -lgcc_s compilers: Already in lflags: -lgcc_s compilers: Checking arg --no-as-needed compilers: Unknown arg --no-as-needed compilers: Checking arg /usr/lib/gcc/ppc64le-redhat-linux/4.8.5/crtend.o compilers: Unknown arg /usr/lib/gcc/ppc64le-redhat-linux/4.8.5/crtend.o compilers: Checking arg /usr/lib64/crtn.o compilers: Unknown arg /usr/lib64/crtn.o compilers: Libraries needed to link Fortran code with the C linker: ['/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib/pgi.ld', '-Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib', '-L/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib', '-Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib', '-L/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib', '-Wl,-rpath,/usr/lib/gcc/ppc64le-redhat-linux/4.8.5', '-L/usr/lib/gcc/ppc64le-redhat-linux/4.8.5', '-lstdc++', '-ldl', '-lpthread', '-lmpiprofilesupport', '-lmpi_ibm_usempi', '-lmpi_ibm_mpifh', '-lmpi_ibm', '-Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib', '-lpgf90rtl', '-lpgf90', '-lpgf90_rpm1', '-lpgf902', '-lpgftnrtl', '-latomic', '-lpgkomp', '-lomp', '-lomptarget', '-lpgmath', '-lpgc', '-lrt', '-lmass_simdp9', '-lmassvp9', '-lmassp9', '-lm', '-lgcc_s'] compilers: Libraries needed to link Fortran main with the C linker: [] compilers: Check that Fortran libraries can be used with C as the linker Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -g -fast /tmp/petsc-zrcSd3/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -g -fast /tmp/petsc-zrcSd3/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.setCompilers/conftest -g -fast /tmp/petsc-zrcSd3/config.setCompilers/conftest.o /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib/pgi.ld -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib -L/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -L/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -Wl,-rpath,/usr/lib/gcc/ppc64le-redhat-linux/4.8.5 -L/usr/lib/gcc/ppc64le-redhat-linux/4.8.5 -lstdc++ -ldl -lpthread -lmpiprofilesupport -lmpi_ibm_usempi -lmpi_ibm_mpifh -lmpi_ibm -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -lpgf90rtl -lpgf90 -lpgf90_rpm1 -lpgf902 -lpgftnrtl -latomic -lpgkomp -lomp -lomptarget -lpgmath -lpgc -lrt -lmass_simdp9 -lmassvp9 -lmassp9 -lm -lgcc_s -lstdc++ -ldl Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -g -fast /tmp/petsc-zrcSd3/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.setCompilers/conftest -g -fast /tmp/petsc-zrcSd3/config.setCompilers/conftest.o /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib/pgi.ld -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib -L/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -L/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -Wl,-rpath,/usr/lib/gcc/ppc64le-redhat-linux/4.8.5 -L/usr/lib/gcc/ppc64le-redhat-linux/4.8.5 -lstdc++ -ldl -lpthread -lmpiprofilesupport -lmpi_ibm_usempi -lmpi_ibm_mpifh -lmpi_ibm -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -lpgf90rtl -lpgf90 -lpgf90_rpm1 -lpgf902 -lpgftnrtl -latomic -lpgkomp -lomp -lomptarget -lpgmath -lpgc -lrt -lmass_simdp9 -lmassvp9 -lmassp9 -lm -lgcc_s -lstdc++ -ldl -lpetsc-ufod4vtr9mqHvKIQiVAm Possible ERROR while running linker: exit code 2 stderr: /usr/bin/ld: cannot find -lpetsc-ufod4vtr9mqHvKIQiVAm Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -g -fast /tmp/petsc-zrcSd3/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.setCompilers/conftest -g -fast /tmp/petsc-zrcSd3/config.setCompilers/conftest.o /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib/pgi.ld -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib -L/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -L/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -Wl,-rpath,/usr/lib/gcc/ppc64le-redhat-linux/4.8.5 -L/usr/lib/gcc/ppc64le-redhat-linux/4.8.5 -lstdc++ -ldl -lpthread -lmpiprofilesupport -lmpi_ibm_usempi -lmpi_ibm_mpifh -lmpi_ibm -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -lpgf90rtl -lpgf90 -lpgf90_rpm1 -lpgf902 -lpgftnrtl -latomic -lpgkomp -lomp -lomptarget -lpgmath -lpgc -lrt -lmass_simdp9 -lmassvp9 -lmassp9 -lm -lgcc_s -lstdc++ -ldl Testing executable /tmp/petsc-zrcSd3/config.setCompilers/conftest to see if it can be run Executing: /tmp/petsc-zrcSd3/config.setCompilers/conftest Running Executable with threads to time it out at 60 Executing: /tmp/petsc-zrcSd3/config.setCompilers/conftest compilers: Check that Fortran libraries can be used with C++ as linker compilers: Fortran libraries can be used from C++ Running Executable WITHOUT threads to time it out Executing: mpiCC -c -o /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -g -fast -std=c++11 /tmp/petsc-zrcSd3/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpiCC -c -o /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -g -fast -std=c++11 /tmp/petsc-zrcSd3/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpiCC -o /tmp/petsc-zrcSd3/config.setCompilers/conftest -g -fast /tmp/petsc-zrcSd3/config.setCompilers/conftest.o /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib/pgi.ld -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib -L/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -L/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -Wl,-rpath,/usr/lib/gcc/ppc64le-redhat-linux/4.8.5 -L/usr/lib/gcc/ppc64le-redhat-linux/4.8.5 -lstdc++ -ldl -lpthread -lmpiprofilesupport -lmpi_ibm_usempi -lmpi_ibm_mpifh -lmpi_ibm -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -lpgf90rtl -lpgf90 -lpgf90_rpm1 -lpgf902 -lpgftnrtl -latomic -lpgkomp -lomp -lomptarget -lpgmath -lpgc -lrt -lmass_simdp9 -lmassvp9 -lmassp9 -lm -lgcc_s -lstdc++ -ldl Running Executable WITHOUT threads to time it out Executing: mpiCC -c -o /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -g -fast -std=c++11 /tmp/petsc-zrcSd3/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpiCC -o /tmp/petsc-zrcSd3/config.setCompilers/conftest -g -fast /tmp/petsc-zrcSd3/config.setCompilers/conftest.o /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib/pgi.ld -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib -L/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -L/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -Wl,-rpath,/usr/lib/gcc/ppc64le-redhat-linux/4.8.5 -L/usr/lib/gcc/ppc64le-redhat-linux/4.8.5 -lstdc++ -ldl -lpthread -lmpiprofilesupport -lmpi_ibm_usempi -lmpi_ibm_mpifh -lmpi_ibm -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -lpgf90rtl -lpgf90 -lpgf90_rpm1 -lpgf902 -lpgftnrtl -latomic -lpgkomp -lomp -lomptarget -lpgmath -lpgc -lrt -lmass_simdp9 -lmassvp9 -lmassp9 -lm -lgcc_s -lstdc++ -ldl -lpetsc-ufod4vtr9mqHvKIQiVAm Possible ERROR while running linker: exit code 2 stderr: /usr/bin/ld: cannot find -lpetsc-ufod4vtr9mqHvKIQiVAm Running Executable WITHOUT threads to time it out Executing: mpiCC -c -o /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -g -fast -std=c++11 /tmp/petsc-zrcSd3/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpiCC -o /tmp/petsc-zrcSd3/config.setCompilers/conftest -g -fast /tmp/petsc-zrcSd3/config.setCompilers/conftest.o /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib/pgi.ld -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib -L/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -L/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -Wl,-rpath,/usr/lib/gcc/ppc64le-redhat-linux/4.8.5 -L/usr/lib/gcc/ppc64le-redhat-linux/4.8.5 -lstdc++ -ldl -lpthread -lmpiprofilesupport -lmpi_ibm_usempi -lmpi_ibm_mpifh -lmpi_ibm -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -lpgf90rtl -lpgf90 -lpgf90_rpm1 -lpgf902 -lpgftnrtl -latomic -lpgkomp -lomp -lomptarget -lpgmath -lpgc -lrt -lmass_simdp9 -lmassvp9 -lmassp9 -lm -lgcc_s -lstdc++ -ldl Testing executable /tmp/petsc-zrcSd3/config.setCompilers/conftest to see if it can be run Executing: /tmp/petsc-zrcSd3/config.setCompilers/conftest Running Executable with threads to time it out at 60 Executing: /tmp/petsc-zrcSd3/config.setCompilers/conftest ================================================================================ TEST checkFortranLinkingCxx from config.compilers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/compilers.py:1310) TESTING: checkFortranLinkingCxx from config.compilers(config/BuildSystem/config/compilers.py:1310) Check that Fortran can link C++ libraries Running Executable WITHOUT threads to time it out Executing: mpiCC -c -o /tmp/petsc-zrcSd3/config.compilers/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -g -fast -std=c++11 /tmp/petsc-zrcSd3/config.compilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" extern "C" void d1chk_(void); void foo(void){d1chk_();} Running Executable WITHOUT threads to time it out Executing: mpiCC -c -o /tmp/petsc-zrcSd3/config.compilers/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -g -fast -std=c++11 /tmp/petsc-zrcSd3/config.compilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" extern "C" void d1chk_(void); void d1chk_(void){return;} Running Executable WITHOUT threads to time it out Executing: mpif90 -c -o /tmp/petsc-zrcSd3/config.compilers/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -g -fast /tmp/petsc-zrcSd3/config.compilers/conftest.F90 Successful compile: Source: program main call d1chk() end Running Executable WITHOUT threads to time it out Executing: mpif90 -o /tmp/petsc-zrcSd3/config.compilers/conftest -g -fast /tmp/petsc-zrcSd3/config.compilers/conftest.o /tmp/petsc-zrcSd3/config.compilers/cxxobj.o /tmp/petsc-zrcSd3/config.compilers/confc.o -lstdc++ -ldl compilers: Fortran can link C++ functions ================================================================================ TEST setupFrameworkCompilers from config.compilers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/compilers.py:1455) TESTING: setupFrameworkCompilers from config.compilers(config/BuildSystem/config/compilers.py:1455) child config.compilers 24.914493 ================================================================================ TEST configureClosure from config.utilities.closure(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/utilities/closure.py:17) TESTING: configureClosure from config.utilities.closure(config/BuildSystem/config/utilities/closure.py:17) Determine if Apple ^close syntax is supported in C All intermediate test results are stored in /tmp/petsc-zrcSd3/config.utilities.closure Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.utilities.closure/conftest.o -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.compilers -g -fast /tmp/petsc-zrcSd3/config.utilities.closure/conftest.c Possible ERROR while running compiler: exit code 2 stderr: PGC-S-0037-Syntax error: Recovery attempted by deleting '^' (/tmp/petsc-zrcSd3/config.utilities.closure/conftest.c: 6) PGC/power Linux 19.9-0: compilation completed with severe errors Source: #include "confdefs.h" #include "conffix.h" #include int main() { int (^closure)(int);; return 0; } Compile failed inside link child config.utilities.closure 0.114534 ================================================================================ TEST checkFortranTypeSizes from config.compilersFortran(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/compilersFortran.py:56) TESTING: checkFortranTypeSizes from config.compilersFortran(config/BuildSystem/config/compilersFortran.py:56) Check whether real*8 is supported and suggest flags which will allow support All intermediate test results are stored in /tmp/petsc-zrcSd3/config.compilersFortran Running Executable WITHOUT threads to time it out Executing: mpif90 -c -o /tmp/petsc-zrcSd3/config.compilersFortran/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -g -fast /tmp/petsc-zrcSd3/config.compilersFortran/conftest.F90 Successful compile: Source: program main real*8 variable end ================================================================================ TEST checkFortranPreprocessor from config.compilersFortran(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/compilersFortran.py:73) TESTING: checkFortranPreprocessor from config.compilersFortran(config/BuildSystem/config/compilersFortran.py:73) Determine if Fortran handles preprocessing properly Running Executable WITHOUT threads to time it out Executing: mpif90 -c -o /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.setCompilers -g -fast /tmp/petsc-zrcSd3/config.setCompilers/conftest.F90 Successful compile: Source: program main #define dummy dummy #ifndef dummy fooey #endif end compilers: Fortran uses preprocessor ================================================================================ TEST checkFortranDefineCompilerOption from config.compilersFortran(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/compilersFortran.py:96) TESTING: checkFortranDefineCompilerOption from config.compilersFortran(config/BuildSystem/config/compilersFortran.py:96) Check if -WF,-Dfoobar or -Dfoobar is the compiler option to define a macro Running Executable WITHOUT threads to time it out Executing: mpif90 -c -o /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.setCompilers -g -fast -DTesting /tmp/petsc-zrcSd3/config.setCompilers/conftest.F90 Successful compile: Source: program main #define dummy dummy #ifndef Testing fooey #endif end Defined make macro "FC_DEFINE_FLAG" to "-D" compilers: Fortran uses -D for defining macro ================================================================================ TEST checkFortran90 from config.compilersFortran(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/compilersFortran.py:146) TESTING: checkFortran90 from config.compilersFortran(config/BuildSystem/config/compilersFortran.py:146) Determine whether the Fortran compiler handles F90 Running Executable WITHOUT threads to time it out Executing: mpif90 -c -o /tmp/petsc-zrcSd3/config.compilersFortran/conftest.o -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilersFortran -g -fast /tmp/petsc-zrcSd3/config.compilersFortran/conftest.F90 Successful compile: Source: program main REAL(KIND=SELECTED_REAL_KIND(10)) d INTEGER, PARAMETER :: int = SELECTED_INT_KIND(8) INTEGER (KIND=int) :: ierr ierr = 1 end Running Executable WITHOUT threads to time it out Executing: mpif90 -o /tmp/petsc-zrcSd3/config.compilersFortran/conftest -g -fast /tmp/petsc-zrcSd3/config.compilersFortran/conftest.o -lstdc++ -ldl Fortran compiler supports F90 ================================================================================ TEST checkFortran90FreeForm from config.compilersFortran(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/compilersFortran.py:162) TESTING: checkFortran90FreeForm from config.compilersFortran(config/BuildSystem/config/compilersFortran.py:162) Determine whether the Fortran compiler handles F90FreeForm We also require that the compiler handles lines longer than 132 characters Running Executable WITHOUT threads to time it out Executing: mpif90 -c -o /tmp/petsc-zrcSd3/config.compilersFortran/conftest.o -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilersFortran -g -fast /tmp/petsc-zrcSd3/config.compilersFortran/conftest.F90 Successful compile: Source: program main INTEGER, PARAMETER :: int = SELECTED_INT_KIND(8); INTEGER (KIND=int) :: ierr; ierr = 1 end Running Executable WITHOUT threads to time it out Executing: mpif90 -o /tmp/petsc-zrcSd3/config.compilersFortran/conftest -g -fast /tmp/petsc-zrcSd3/config.compilersFortran/conftest.o -lstdc++ -ldl Defined "USING_F90FREEFORM" to "1" Fortran compiler supports F90FreeForm ================================================================================ TEST checkFortran2003 from config.compilersFortran(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/compilersFortran.py:176) TESTING: checkFortran2003 from config.compilersFortran(config/BuildSystem/config/compilersFortran.py:176) Determine whether the Fortran compiler handles F2003 Running Executable WITHOUT threads to time it out Executing: mpif90 -c -o /tmp/petsc-zrcSd3/config.compilersFortran/conftest.o -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilersFortran -g -fast /tmp/petsc-zrcSd3/config.compilersFortran/conftest.F90 Successful compile: Source: module Base_module type, public :: base_type integer :: A contains procedure, public :: Print => BasePrint end type base_type contains subroutine BasePrint(this) class(base_type) :: this end subroutine BasePrint end module Base_module program main use,intrinsic :: iso_c_binding Type(C_Ptr),Dimension(:),Pointer :: CArray character(kind=c_char),pointer :: nullc => null() character(kind=c_char,len=5),dimension(:),pointer::list1 allocate(list1(5)) CArray = (/(c_loc(list1(i)),i=1,5),c_loc(nullc)/) end Running Executable WITHOUT threads to time it out Executing: mpif90 -o /tmp/petsc-zrcSd3/config.compilersFortran/conftest -g -fast /tmp/petsc-zrcSd3/config.compilersFortran/conftest.o -lstdc++ -ldl Defined "USING_F2003" to "1" Fortran compiler supports F2003 ================================================================================ TEST checkFortran90Array from config.compilersFortran(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/compilersFortran.py:211) TESTING: checkFortran90Array from config.compilersFortran(config/BuildSystem/config/compilersFortran.py:211) Check for F90 array interfaces Running Executable WITHOUT threads to time it out Executing: uname -s stdout: Linux Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.compilersFortran/conftest.o -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -g -fast /tmp/petsc-zrcSd3/config.compilersFortran/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include void f90arraytest_(void* a1, void* a2,void* a3, void* i) { printf("arrays [%p %p %p]\n",a1,a2,a3); fflush(stdout); return; } void f90ptrtest_(void* a1, void* a2,void* a3, void* i, void* p1 ,void* p2, void* p3) { printf("arrays [%p %p %p]\n",a1,a2,a3); if ((p1 == p3) && (p1 != p2)) { printf("pointers match! [%p %p] [%p]\n",p1,p3,p2); fflush(stdout); } else { printf("pointers do not match! [%p %p] [%p]\n",p1,p3,p2); fflush(stdout); exit(111); } return; } Running Executable WITHOUT threads to time it out Executing: mpif90 -c -o /tmp/petsc-zrcSd3/config.compilersFortran/conftest.o -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilersFortran -g -fast /tmp/petsc-zrcSd3/config.compilersFortran/conftest.F90 Successful compile: Source: program main Interface Subroutine f90ptrtest(p1,p2,p3,i) integer, pointer :: p1(:,:) integer, pointer :: p2(:,:) integer, pointer :: p3(:,:) integer i End Subroutine End Interface integer, pointer :: ptr1(:,:),ptr2(:,:) integer, target :: array(6:8,9:21) integer in in = 25 ptr1 => array ptr2 => array call f90arraytest(ptr1,ptr2,ptr1,in) call f90ptrtest(ptr1,ptr2,ptr1,in) end Running Executable WITHOUT threads to time it out Executing: mpif90 -o /tmp/petsc-zrcSd3/config.compilersFortran/conftest -g -fast /tmp/petsc-zrcSd3/config.compilersFortran/conftest.o /tmp/petsc-zrcSd3/config.compilersFortran/fooobj.o -lstdc++ -ldl Testing executable /tmp/petsc-zrcSd3/config.compilersFortran/conftest to see if it can be run Executing: /tmp/petsc-zrcSd3/config.compilersFortran/conftest Running Executable with threads to time it out at 60 Executing: /tmp/petsc-zrcSd3/config.compilersFortran/conftest stdout: arrays [0x100200c0 0x100200c0 0x100200c0] arrays [0x7fffe1dd71c8 0x7fffe1dd7280 0x7fffe1dd71c8] pointers match! [0x7fffe1dd7118 0x7fffe1dd7118] [0x7fffe1dd71d0] Defined "HAVE_F90_2PTR_ARG" to "1" compilers: F90 compiler uses two arguments for array pointers ================================================================================ TEST checkFortranModuleInclude from config.compilersFortran(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/compilersFortran.py:298) TESTING: checkFortranModuleInclude from config.compilersFortran(config/BuildSystem/config/compilersFortran.py:298) Figures out what flag is used to specify the include path for Fortran modules Running Executable WITHOUT threads to time it out Executing: mpif90 -c -o /tmp/petsc-zrcSd3/config.compilersFortran/conftest.o -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilersFortran -g -fast /tmp/petsc-zrcSd3/config.compilersFortran/conftest.F90 Successful compile: Source: module configtest integer testint parameter (testint = 42) end module configtest Running Executable WITHOUT threads to time it out Executing: mpif90 -c -o /tmp/petsc-zrcSd3/config.compilersFortran/conftest.o -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.compilersFortran/confdir -g -fast /tmp/petsc-zrcSd3/config.compilersFortran/conftest.F90 Successful compile: Source: program main use configtest write(*,*) testint end Running Executable WITHOUT threads to time it out Executing: mpif90 -o /tmp/petsc-zrcSd3/config.compilersFortran/conftest -I/tmp/petsc-zrcSd3/config.compilersFortran/confdir -g -fast /tmp/petsc-zrcSd3/config.compilersFortran/conftest.o /tmp/petsc-zrcSd3/config.compilersFortran/configtest.o -lstdc++ -ldl compilers: Fortran module include flag -I found ================================================================================ TEST checkFortranModuleOutput from config.compilersFortran(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/compilersFortran.py:364) TESTING: checkFortranModuleOutput from config.compilersFortran(config/BuildSystem/config/compilersFortran.py:364) Figures out what flag is used to specify the include path for Fortran modules Running Executable WITHOUT threads to time it out Executing: mpif90 -c -o /tmp/petsc-zrcSd3/config.compilersFortran/conftest.o -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilersFortran -module /tmp/petsc-zrcSd3/config.compilersFortran/confdir -g -fast /tmp/petsc-zrcSd3/config.compilersFortran/conftest.F90 Successful compile: Source: module configtest integer testint parameter (testint = 42) end module configtest compilers: Fortran module output flag -module found ================================================================================ TEST checkFortranTypeStar from config.compilersFortran(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/compilersFortran.py:135) TESTING: checkFortranTypeStar from config.compilersFortran(config/BuildSystem/config/compilersFortran.py:135) Determine whether the Fortran compiler handles type(*) Running Executable WITHOUT threads to time it out Executing: mpif90 -c -o /tmp/petsc-zrcSd3/config.compilersFortran/conftest.o -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilersFortran -g -fast /tmp/petsc-zrcSd3/config.compilersFortran/conftest.F90 Possible ERROR while running compiler: exit code 2 stderr: PGF90-S-0034-Syntax error at or near * (/tmp/petsc-zrcSd3/config.compilersFortran/conftest.F90: 4) 0 inform, 0 warnings, 1 severes, 0 fatal for main Source: program main interface subroutine a(b) type(*) :: b(:) end subroutine end interface end Fortran compiler does not support type(*) ================================================================================ TEST checkFortranTypeInitialize from config.compilersFortran(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/compilersFortran.py:125) TESTING: checkFortranTypeInitialize from config.compilersFortran(config/BuildSystem/config/compilersFortran.py:125) Determines if PETSc objects in Fortran are initialized by default (doesn't work with common blocks) Defined "FORTRAN_TYPE_INITIALIZE" to " = -2" Initializing Fortran objects ================================================================================ TEST configureFortranFlush from config.compilersFortran(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/compilersFortran.py:116) TESTING: configureFortranFlush from config.compilersFortran(config/BuildSystem/config/compilersFortran.py:116) Running Executable WITHOUT threads to time it out Executing: mpif90 -c -o /tmp/petsc-zrcSd3/config.compilersFortran/conftest.o -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilersFortran -g -fast /tmp/petsc-zrcSd3/config.compilersFortran/conftest.F90 Successful compile: Source: program main call flush(6) end Running Executable WITHOUT threads to time it out Executing: mpif90 -o /tmp/petsc-zrcSd3/config.compilersFortran/conftest -g -fast /tmp/petsc-zrcSd3/config.compilersFortran/conftest.o -lstdc++ -ldl Defined "HAVE_FORTRAN_FLUSH" to "1" ================================================================================ TEST checkDependencyGenerationFlag from config.compilersFortran(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/compilersFortran.py:409) TESTING: checkDependencyGenerationFlag from config.compilersFortran(config/BuildSystem/config/compilersFortran.py:409) Check if -MMD works for dependency generation, and add it if it does Trying FC compiler flag -MMD -MP Rejected FC compiler flag -MMD -MP Trying FC compiler flag -MMD Rejected FC compiler flag -MMD Trying FC compiler flag -xMMD Rejected FC compiler flag -xMMD Trying FC compiler flag -qmakedep=gcc Rejected FC compiler flag -qmakedep=gcc Trying FC compiler flag -MD Rejected FC compiler flag -MD Running Executable WITHOUT threads to time it out Executing: mpif90 -c -o /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilersFortran -g -fast -MMD -MP /tmp/petsc-zrcSd3/config.setCompilers/conftest.F90 Possible ERROR while running compiler: exit code 1 stderr: pgfortran-Error-Unknown switch: -MMD pgfortran-Error-Unknown switch: -MP Source: program main end Rejecting compiler flag -MMD -MP due to nonzero status from link Rejecting compiler flag -MMD -MP due to pgfortran-Error-Unknown switch: -MMD pgfortran-Error-Unknown switch: -MP PETSc Error: No output file produced Running Executable WITHOUT threads to time it out Executing: mpif90 -c -o /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilersFortran -g -fast -MMD /tmp/petsc-zrcSd3/config.setCompilers/conftest.F90 Possible ERROR while running compiler: exit code 1 stderr: pgfortran-Error-Unknown switch: -MMD Source: program main end Rejecting compiler flag -MMD due to nonzero status from link Rejecting compiler flag -MMD due to pgfortran-Error-Unknown switch: -MMD PETSc Error: No output file produced Running Executable WITHOUT threads to time it out Executing: mpif90 -c -o /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilersFortran -g -fast -xMMD /tmp/petsc-zrcSd3/config.setCompilers/conftest.F90 Possible ERROR while running compiler: exit code 1 stderr: pgfortran-Error-Unknown switch: -xMMD Source: program main end Rejecting compiler flag -xMMD due to nonzero status from link Rejecting compiler flag -xMMD due to pgfortran-Error-Unknown switch: -xMMD PETSc Error: No output file produced Running Executable WITHOUT threads to time it out Executing: mpif90 -c -o /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilersFortran -g -fast -qmakedep=gcc /tmp/petsc-zrcSd3/config.setCompilers/conftest.F90 Possible ERROR while running compiler: exit code 1 stderr: pgfortran-Error-Unknown switch: -qmakedep=gcc Source: program main end Rejecting compiler flag -qmakedep=gcc due to nonzero status from link Rejecting compiler flag -qmakedep=gcc due to pgfortran-Error-Unknown switch: -qmakedep=gcc PETSc Error: No output file produced Running Executable WITHOUT threads to time it out Executing: mpif90 -c -o /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilersFortran -g -fast -MD /tmp/petsc-zrcSd3/config.setCompilers/conftest.F90 Possible ERROR while running compiler: exit code 1 stderr: pgfortran-Error-Unknown switch: -MD Source: program main end Rejecting compiler flag -MD due to nonzero status from link Rejecting compiler flag -MD due to pgfortran-Error-Unknown switch: -MD PETSc Error: No output file produced child config.compilersFortran 7.717812 ================================================================================ TEST checkStdC from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:105) TESTING: checkStdC from config.headers(config/BuildSystem/config/headers.py:105) Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.headers/conftest.o -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -g -fast /tmp/petsc-zrcSd3/config.headers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #include #include int main() { ; return 0; } Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.headers/conftest.o -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -g -fast /tmp/petsc-zrcSd3/config.headers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #define ISLOWER(c) ('a' <= (c) && (c) <= 'z') #define TOUPPER(c) (ISLOWER(c) ? 'A' + ((c) - 'a') : (c)) #define XOR(e, f) (((e) && !(f)) || (!(e) && (f))) int main() { int i; for(i = 0; i < 256; i++) if (XOR(islower(i), ISLOWER(i)) || toupper(i) != TOUPPER(i)) exit(2); exit(0); ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.headers/conftest -g -fast /tmp/petsc-zrcSd3/config.headers/conftest.o -lstdc++ -ldl Testing executable /tmp/petsc-zrcSd3/config.headers/conftest to see if it can be run Executing: /tmp/petsc-zrcSd3/config.headers/conftest Running Executable with threads to time it out at 60 Executing: /tmp/petsc-zrcSd3/config.headers/conftest ================================================================================ TEST checkStat from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:138) TESTING: checkStat from config.headers(config/BuildSystem/config/headers.py:138) Checks whether stat file-mode macros are broken, and defines STAT_MACROS_BROKEN if they are Preprocessing source: #include "confdefs.h" #include "conffix.h" #include #include #if defined(S_ISBLK) && defined(S_IFDIR) # if S_ISBLK (S_IFDIR) You lose. # endif #endif #if defined(S_ISBLK) && defined(S_IFCHR) # if S_ISBLK (S_IFCHR) You lose. # endif #endif #if defined(S_ISLNK) && defined(S_IFREG) # if S_ISLNK (S_IFREG) You lose. # endif #endif #if defined(S_ISSOCK) && defined(S_IFREG) # if S_ISSOCK (S_IFREG) You lose. # endif #endif Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c ================================================================================ TEST checkSysWait from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:173) TESTING: checkSysWait from config.headers(config/BuildSystem/config/headers.py:173) Check for POSIX.1 compatible sys/wait.h, and defines HAVE_SYS_WAIT_H if found Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.headers/conftest.o -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -g -fast /tmp/petsc-zrcSd3/config.headers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #ifndef WEXITSTATUS #define WEXITSTATUS(stat_val) ((unsigned)(stat_val) >> 8) #endif #ifndef WIFEXITED #define WIFEXITED(stat_val) (((stat_val) & 255) == 0) #endif int main() { int s; wait (&s); s = WIFEXITED (s) ? WEXITSTATUS (s) : 1; ; return 0; } Defined "HAVE_SYS_WAIT_H" to "1" ================================================================================ TEST checkTime from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:195) TESTING: checkTime from config.headers(config/BuildSystem/config/headers.py:195) Checks if you can safely include both and , and if so defines TIME_WITH_SYS_TIME Checking for header: time.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_TIME_H" to "1" Checking for header: sys/time.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SYS_TIME_H" to "1" ================================================================================ TEST checkMath from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:201) TESTING: checkMath from config.headers(config/BuildSystem/config/headers.py:201) Checks for the math headers and defines Checking for header: math.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.headers/conftest.o -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -g -fast /tmp/petsc-zrcSd3/config.headers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { double pi = M_PI; if (pi); ; return 0; } Found math #defines, like M_PI ================================================================================ TEST check from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: setjmp.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SETJMP_H" to "1" ================================================================================ TEST check from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: dos.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 0 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 10 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 16 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 21 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 25 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 29 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 40 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 70 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" extern void * __builtin_return_address ( int ) ; extern void * __builtin_frame_address ( int ) ; # 79 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 83 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" typedef struct __va_list_tag { void * args ; } * __pgi_va_list ; # 108 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" void __builtin_pgi_va_start ( ) ; void * __builtin_pgi_va_arg ( ) ; # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/confdefs.h" # 2 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 2 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/conffix.h" # 3 "/tmp/petsc-zrcSd3/config.headers/conftest.c" stderr: PGC-F-0206-Can't find include file dos.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3) PGC/power Linux 19.9-0: compilation aborted Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:PGC-F-0206-Can't find include file dos.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3) PGC/power Linux 19.9-0: compilation aborted : Preprocess stderr after filtering:PGC-F-0206-Can't find include file dos.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3)PGC/power Linux 19.9-0: compilation aborted: ================================================================================ TEST check from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: fcntl.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_FCNTL_H" to "1" ================================================================================ TEST check from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: float.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_FLOAT_H" to "1" ================================================================================ TEST check from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: io.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 0 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 10 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 16 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 21 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 25 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 29 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 40 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 70 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" extern void * __builtin_return_address ( int ) ; extern void * __builtin_frame_address ( int ) ; # 79 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 83 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" typedef struct __va_list_tag { void * args ; } * __pgi_va_list ; # 108 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" void __builtin_pgi_va_start ( ) ; void * __builtin_pgi_va_arg ( ) ; # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/confdefs.h" # 2 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 2 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/conffix.h" # 3 "/tmp/petsc-zrcSd3/config.headers/conftest.c" stderr: PGC-F-0206-Can't find include file io.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3) PGC/power Linux 19.9-0: compilation aborted Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:PGC-F-0206-Can't find include file io.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3) PGC/power Linux 19.9-0: compilation aborted : Preprocess stderr after filtering:PGC-F-0206-Can't find include file io.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3)PGC/power Linux 19.9-0: compilation aborted: ================================================================================ TEST check from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: malloc.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_MALLOC_H" to "1" ================================================================================ TEST check from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: pwd.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_PWD_H" to "1" ================================================================================ TEST check from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: strings.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_STRINGS_H" to "1" ================================================================================ TEST check from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: unistd.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_UNISTD_H" to "1" ================================================================================ TEST check from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/sysinfo.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SYS_SYSINFO_H" to "1" ================================================================================ TEST check from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: machine/endian.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 0 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 10 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 16 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 21 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 25 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 29 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 40 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 70 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" extern void * __builtin_return_address ( int ) ; extern void * __builtin_frame_address ( int ) ; # 79 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 83 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" typedef struct __va_list_tag { void * args ; } * __pgi_va_list ; # 108 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" void __builtin_pgi_va_start ( ) ; void * __builtin_pgi_va_arg ( ) ; # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/confdefs.h" # 2 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 2 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/conffix.h" # 3 "/tmp/petsc-zrcSd3/config.headers/conftest.c" stderr: PGC-F-0206-Can't find include file machine/endian.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3) PGC/power Linux 19.9-0: compilation aborted Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:PGC-F-0206-Can't find include file machine/endian.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3) PGC/power Linux 19.9-0: compilation aborted : Preprocess stderr after filtering:PGC-F-0206-Can't find include file machine/endian.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3)PGC/power Linux 19.9-0: compilation aborted: ================================================================================ TEST check from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/param.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SYS_PARAM_H" to "1" ================================================================================ TEST check from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/procfs.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SYS_PROCFS_H" to "1" ================================================================================ TEST check from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/resource.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SYS_RESOURCE_H" to "1" ================================================================================ TEST check from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/systeminfo.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 0 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 10 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 16 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 21 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 25 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 29 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 40 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 70 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" extern void * __builtin_return_address ( int ) ; extern void * __builtin_frame_address ( int ) ; # 79 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 83 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" typedef struct __va_list_tag { void * args ; } * __pgi_va_list ; # 108 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" void __builtin_pgi_va_start ( ) ; void * __builtin_pgi_va_arg ( ) ; # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/confdefs.h" # 2 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 2 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/conffix.h" # 3 "/tmp/petsc-zrcSd3/config.headers/conftest.c" stderr: PGC-F-0206-Can't find include file sys/systeminfo.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3) PGC/power Linux 19.9-0: compilation aborted Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:PGC-F-0206-Can't find include file sys/systeminfo.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3) PGC/power Linux 19.9-0: compilation aborted : Preprocess stderr after filtering:PGC-F-0206-Can't find include file sys/systeminfo.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3)PGC/power Linux 19.9-0: compilation aborted: ================================================================================ TEST check from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/times.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SYS_TIMES_H" to "1" ================================================================================ TEST check from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/utsname.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SYS_UTSNAME_H" to "1" ================================================================================ TEST check from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/socket.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SYS_SOCKET_H" to "1" ================================================================================ TEST check from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/wait.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SYS_WAIT_H" to "1" ================================================================================ TEST check from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: netinet/in.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_NETINET_IN_H" to "1" ================================================================================ TEST check from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: netdb.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_NETDB_H" to "1" ================================================================================ TEST check from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: Direct.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 0 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 10 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 16 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 21 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 25 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 29 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 40 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 70 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" extern void * __builtin_return_address ( int ) ; extern void * __builtin_frame_address ( int ) ; # 79 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 83 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" typedef struct __va_list_tag { void * args ; } * __pgi_va_list ; # 108 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" void __builtin_pgi_va_start ( ) ; void * __builtin_pgi_va_arg ( ) ; # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/confdefs.h" # 2 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 2 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/conffix.h" # 3 "/tmp/petsc-zrcSd3/config.headers/conftest.c" stderr: PGC-F-0206-Can't find include file Direct.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3) PGC/power Linux 19.9-0: compilation aborted Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:PGC-F-0206-Can't find include file Direct.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3) PGC/power Linux 19.9-0: compilation aborted : Preprocess stderr after filtering:PGC-F-0206-Can't find include file Direct.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3)PGC/power Linux 19.9-0: compilation aborted: ================================================================================ TEST check from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: time.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_TIME_H" to "1" ================================================================================ TEST check from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: Ws2tcpip.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 0 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 10 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 16 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 21 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 25 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 29 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 40 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 70 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" extern void * __builtin_return_address ( int ) ; extern void * __builtin_frame_address ( int ) ; # 79 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 83 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" typedef struct __va_list_tag { void * args ; } * __pgi_va_list ; # 108 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" void __builtin_pgi_va_start ( ) ; void * __builtin_pgi_va_arg ( ) ; # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/confdefs.h" # 2 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 2 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/conffix.h" # 3 "/tmp/petsc-zrcSd3/config.headers/conftest.c" stderr: PGC-F-0206-Can't find include file Ws2tcpip.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3) PGC/power Linux 19.9-0: compilation aborted Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:PGC-F-0206-Can't find include file Ws2tcpip.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3) PGC/power Linux 19.9-0: compilation aborted : Preprocess stderr after filtering:PGC-F-0206-Can't find include file Ws2tcpip.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3)PGC/power Linux 19.9-0: compilation aborted: ================================================================================ TEST check from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/types.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SYS_TYPES_H" to "1" ================================================================================ TEST check from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: WindowsX.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 0 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 10 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 16 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 21 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 25 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 29 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 40 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 70 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" extern void * __builtin_return_address ( int ) ; extern void * __builtin_frame_address ( int ) ; # 79 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 83 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" typedef struct __va_list_tag { void * args ; } * __pgi_va_list ; # 108 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" void __builtin_pgi_va_start ( ) ; void * __builtin_pgi_va_arg ( ) ; # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/confdefs.h" # 2 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 2 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/conffix.h" # 3 "/tmp/petsc-zrcSd3/config.headers/conftest.c" stderr: PGC-F-0206-Can't find include file WindowsX.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3) PGC/power Linux 19.9-0: compilation aborted Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:PGC-F-0206-Can't find include file WindowsX.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3) PGC/power Linux 19.9-0: compilation aborted : Preprocess stderr after filtering:PGC-F-0206-Can't find include file WindowsX.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3)PGC/power Linux 19.9-0: compilation aborted: ================================================================================ TEST check from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: float.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_FLOAT_H" to "1" ================================================================================ TEST check from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: ieeefp.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 0 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 10 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 16 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 21 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 25 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 29 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 40 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 70 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" extern void * __builtin_return_address ( int ) ; extern void * __builtin_frame_address ( int ) ; # 79 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 83 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" typedef struct __va_list_tag { void * args ; } * __pgi_va_list ; # 108 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" void __builtin_pgi_va_start ( ) ; void * __builtin_pgi_va_arg ( ) ; # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/confdefs.h" # 2 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 2 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/conffix.h" # 3 "/tmp/petsc-zrcSd3/config.headers/conftest.c" stderr: PGC-F-0206-Can't find include file ieeefp.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3) PGC/power Linux 19.9-0: compilation aborted Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:PGC-F-0206-Can't find include file ieeefp.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3) PGC/power Linux 19.9-0: compilation aborted : Preprocess stderr after filtering:PGC-F-0206-Can't find include file ieeefp.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3)PGC/power Linux 19.9-0: compilation aborted: ================================================================================ TEST check from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: stdint.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_STDINT_H" to "1" ================================================================================ TEST check from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: pthread.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_PTHREAD_H" to "1" ================================================================================ TEST check from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: inttypes.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_INTTYPES_H" to "1" ================================================================================ TEST check from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: immintrin.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 0 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 10 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 16 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 21 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 25 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 29 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 40 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 70 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" extern void * __builtin_return_address ( int ) ; extern void * __builtin_frame_address ( int ) ; # 79 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 83 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" typedef struct __va_list_tag { void * args ; } * __pgi_va_list ; # 108 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" void __builtin_pgi_va_start ( ) ; void * __builtin_pgi_va_arg ( ) ; # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/confdefs.h" # 2 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 2 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/conffix.h" # 3 "/tmp/petsc-zrcSd3/config.headers/conftest.c" stderr: PGC-F-0206-Can't find include file immintrin.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3) PGC/power Linux 19.9-0: compilation aborted Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:PGC-F-0206-Can't find include file immintrin.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3) PGC/power Linux 19.9-0: compilation aborted : Preprocess stderr after filtering:PGC-F-0206-Can't find include file immintrin.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3)PGC/power Linux 19.9-0: compilation aborted: ================================================================================ TEST check from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: zmmintrin.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 0 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 10 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 16 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 21 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 25 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 29 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 40 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 70 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" extern void * __builtin_return_address ( int ) ; extern void * __builtin_frame_address ( int ) ; # 79 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 83 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" typedef struct __va_list_tag { void * args ; } * __pgi_va_list ; # 108 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" void __builtin_pgi_va_start ( ) ; void * __builtin_pgi_va_arg ( ) ; # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/confdefs.h" # 2 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 2 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/conffix.h" # 3 "/tmp/petsc-zrcSd3/config.headers/conftest.c" stderr: PGC-F-0206-Can't find include file zmmintrin.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3) PGC/power Linux 19.9-0: compilation aborted Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:PGC-F-0206-Can't find include file zmmintrin.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3) PGC/power Linux 19.9-0: compilation aborted : Preprocess stderr after filtering:PGC-F-0206-Can't find include file zmmintrin.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3)PGC/power Linux 19.9-0: compilation aborted: ================================================================================ TEST check from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: setjmp.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SETJMP_H" to "1" ================================================================================ TEST check from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: dos.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 0 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 10 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 16 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 21 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 25 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 29 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 40 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 70 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" extern void * __builtin_return_address ( int ) ; extern void * __builtin_frame_address ( int ) ; # 79 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 83 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" typedef struct __va_list_tag { void * args ; } * __pgi_va_list ; # 108 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" void __builtin_pgi_va_start ( ) ; void * __builtin_pgi_va_arg ( ) ; # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/confdefs.h" # 2 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 2 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/conffix.h" # 3 "/tmp/petsc-zrcSd3/config.headers/conftest.c" stderr: PGC-F-0206-Can't find include file dos.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3) PGC/power Linux 19.9-0: compilation aborted Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:PGC-F-0206-Can't find include file dos.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3) PGC/power Linux 19.9-0: compilation aborted : Preprocess stderr after filtering:PGC-F-0206-Can't find include file dos.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3)PGC/power Linux 19.9-0: compilation aborted: ================================================================================ TEST check from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: fcntl.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_FCNTL_H" to "1" ================================================================================ TEST check from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: float.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_FLOAT_H" to "1" ================================================================================ TEST check from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: io.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 0 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 10 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 16 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 21 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 25 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 29 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 40 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 70 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" extern void * __builtin_return_address ( int ) ; extern void * __builtin_frame_address ( int ) ; # 79 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 83 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" typedef struct __va_list_tag { void * args ; } * __pgi_va_list ; # 108 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" void __builtin_pgi_va_start ( ) ; void * __builtin_pgi_va_arg ( ) ; # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/confdefs.h" # 2 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 2 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/conffix.h" # 3 "/tmp/petsc-zrcSd3/config.headers/conftest.c" stderr: PGC-F-0206-Can't find include file io.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3) PGC/power Linux 19.9-0: compilation aborted Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:PGC-F-0206-Can't find include file io.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3) PGC/power Linux 19.9-0: compilation aborted : Preprocess stderr after filtering:PGC-F-0206-Can't find include file io.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3)PGC/power Linux 19.9-0: compilation aborted: ================================================================================ TEST check from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: malloc.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_MALLOC_H" to "1" ================================================================================ TEST check from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: pwd.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_PWD_H" to "1" ================================================================================ TEST check from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: strings.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_STRINGS_H" to "1" ================================================================================ TEST check from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: unistd.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_UNISTD_H" to "1" ================================================================================ TEST check from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/sysinfo.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SYS_SYSINFO_H" to "1" ================================================================================ TEST check from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: machine/endian.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 0 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 10 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 16 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 21 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 25 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 29 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 40 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 70 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" extern void * __builtin_return_address ( int ) ; extern void * __builtin_frame_address ( int ) ; # 79 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 83 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" typedef struct __va_list_tag { void * args ; } * __pgi_va_list ; # 108 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" void __builtin_pgi_va_start ( ) ; void * __builtin_pgi_va_arg ( ) ; # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/confdefs.h" # 2 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 2 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/conffix.h" # 3 "/tmp/petsc-zrcSd3/config.headers/conftest.c" stderr: PGC-F-0206-Can't find include file machine/endian.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3) PGC/power Linux 19.9-0: compilation aborted Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:PGC-F-0206-Can't find include file machine/endian.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3) PGC/power Linux 19.9-0: compilation aborted : Preprocess stderr after filtering:PGC-F-0206-Can't find include file machine/endian.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3)PGC/power Linux 19.9-0: compilation aborted: ================================================================================ TEST check from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/param.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SYS_PARAM_H" to "1" ================================================================================ TEST check from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/procfs.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SYS_PROCFS_H" to "1" ================================================================================ TEST check from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/resource.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SYS_RESOURCE_H" to "1" ================================================================================ TEST check from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/systeminfo.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 0 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 10 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 16 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 21 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 25 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 29 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 40 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 70 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" extern void * __builtin_return_address ( int ) ; extern void * __builtin_frame_address ( int ) ; # 79 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 83 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" typedef struct __va_list_tag { void * args ; } * __pgi_va_list ; # 108 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" void __builtin_pgi_va_start ( ) ; void * __builtin_pgi_va_arg ( ) ; # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/confdefs.h" # 2 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 2 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/conffix.h" # 3 "/tmp/petsc-zrcSd3/config.headers/conftest.c" stderr: PGC-F-0206-Can't find include file sys/systeminfo.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3) PGC/power Linux 19.9-0: compilation aborted Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:PGC-F-0206-Can't find include file sys/systeminfo.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3) PGC/power Linux 19.9-0: compilation aborted : Preprocess stderr after filtering:PGC-F-0206-Can't find include file sys/systeminfo.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3)PGC/power Linux 19.9-0: compilation aborted: ================================================================================ TEST check from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/times.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SYS_TIMES_H" to "1" ================================================================================ TEST check from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/utsname.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SYS_UTSNAME_H" to "1" ================================================================================ TEST check from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/socket.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SYS_SOCKET_H" to "1" ================================================================================ TEST check from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/wait.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SYS_WAIT_H" to "1" ================================================================================ TEST check from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: netinet/in.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_NETINET_IN_H" to "1" ================================================================================ TEST check from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: netdb.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_NETDB_H" to "1" ================================================================================ TEST check from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: Direct.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 0 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 10 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 16 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 21 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 25 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 29 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 40 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 70 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" extern void * __builtin_return_address ( int ) ; extern void * __builtin_frame_address ( int ) ; # 79 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 83 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" typedef struct __va_list_tag { void * args ; } * __pgi_va_list ; # 108 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" void __builtin_pgi_va_start ( ) ; void * __builtin_pgi_va_arg ( ) ; # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/confdefs.h" # 2 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 2 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/conffix.h" # 3 "/tmp/petsc-zrcSd3/config.headers/conftest.c" stderr: PGC-F-0206-Can't find include file Direct.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3) PGC/power Linux 19.9-0: compilation aborted Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:PGC-F-0206-Can't find include file Direct.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3) PGC/power Linux 19.9-0: compilation aborted : Preprocess stderr after filtering:PGC-F-0206-Can't find include file Direct.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3)PGC/power Linux 19.9-0: compilation aborted: ================================================================================ TEST check from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: time.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_TIME_H" to "1" ================================================================================ TEST check from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: Ws2tcpip.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 0 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 10 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 16 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 21 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 25 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 29 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 40 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 70 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" extern void * __builtin_return_address ( int ) ; extern void * __builtin_frame_address ( int ) ; # 79 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 83 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" typedef struct __va_list_tag { void * args ; } * __pgi_va_list ; # 108 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" void __builtin_pgi_va_start ( ) ; void * __builtin_pgi_va_arg ( ) ; # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/confdefs.h" # 2 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 2 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/conffix.h" # 3 "/tmp/petsc-zrcSd3/config.headers/conftest.c" stderr: PGC-F-0206-Can't find include file Ws2tcpip.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3) PGC/power Linux 19.9-0: compilation aborted Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:PGC-F-0206-Can't find include file Ws2tcpip.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3) PGC/power Linux 19.9-0: compilation aborted : Preprocess stderr after filtering:PGC-F-0206-Can't find include file Ws2tcpip.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3)PGC/power Linux 19.9-0: compilation aborted: ================================================================================ TEST check from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/types.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SYS_TYPES_H" to "1" ================================================================================ TEST check from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: WindowsX.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 0 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 10 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 16 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 21 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 25 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 29 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 40 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 70 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" extern void * __builtin_return_address ( int ) ; extern void * __builtin_frame_address ( int ) ; # 79 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 83 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" typedef struct __va_list_tag { void * args ; } * __pgi_va_list ; # 108 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" void __builtin_pgi_va_start ( ) ; void * __builtin_pgi_va_arg ( ) ; # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/confdefs.h" # 2 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 2 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/conffix.h" # 3 "/tmp/petsc-zrcSd3/config.headers/conftest.c" stderr: PGC-F-0206-Can't find include file WindowsX.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3) PGC/power Linux 19.9-0: compilation aborted Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:PGC-F-0206-Can't find include file WindowsX.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3) PGC/power Linux 19.9-0: compilation aborted : Preprocess stderr after filtering:PGC-F-0206-Can't find include file WindowsX.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3)PGC/power Linux 19.9-0: compilation aborted: ================================================================================ TEST check from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: float.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_FLOAT_H" to "1" ================================================================================ TEST check from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: ieeefp.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 0 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 10 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 16 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 21 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 25 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 29 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 40 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 70 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" extern void * __builtin_return_address ( int ) ; extern void * __builtin_frame_address ( int ) ; # 79 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 83 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" typedef struct __va_list_tag { void * args ; } * __pgi_va_list ; # 108 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" void __builtin_pgi_va_start ( ) ; void * __builtin_pgi_va_arg ( ) ; # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/confdefs.h" # 2 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 2 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/conffix.h" # 3 "/tmp/petsc-zrcSd3/config.headers/conftest.c" stderr: PGC-F-0206-Can't find include file ieeefp.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3) PGC/power Linux 19.9-0: compilation aborted Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:PGC-F-0206-Can't find include file ieeefp.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3) PGC/power Linux 19.9-0: compilation aborted : Preprocess stderr after filtering:PGC-F-0206-Can't find include file ieeefp.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3)PGC/power Linux 19.9-0: compilation aborted: ================================================================================ TEST check from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: stdint.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_STDINT_H" to "1" ================================================================================ TEST check from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: pthread.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_PTHREAD_H" to "1" ================================================================================ TEST check from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: inttypes.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_INTTYPES_H" to "1" ================================================================================ TEST check from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: immintrin.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 0 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 10 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 16 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 21 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 25 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 29 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 40 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 70 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" extern void * __builtin_return_address ( int ) ; extern void * __builtin_frame_address ( int ) ; # 79 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 83 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" typedef struct __va_list_tag { void * args ; } * __pgi_va_list ; # 108 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" void __builtin_pgi_va_start ( ) ; void * __builtin_pgi_va_arg ( ) ; # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/confdefs.h" # 2 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 2 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/conffix.h" # 3 "/tmp/petsc-zrcSd3/config.headers/conftest.c" stderr: PGC-F-0206-Can't find include file immintrin.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3) PGC/power Linux 19.9-0: compilation aborted Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:PGC-F-0206-Can't find include file immintrin.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3) PGC/power Linux 19.9-0: compilation aborted : Preprocess stderr after filtering:PGC-F-0206-Can't find include file immintrin.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3)PGC/power Linux 19.9-0: compilation aborted: ================================================================================ TEST check from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: zmmintrin.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 0 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 10 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 16 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 21 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 25 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 29 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 40 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 70 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" extern void * __builtin_return_address ( int ) ; extern void * __builtin_frame_address ( int ) ; # 79 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 83 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" typedef struct __va_list_tag { void * args ; } * __pgi_va_list ; # 108 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" void __builtin_pgi_va_start ( ) ; void * __builtin_pgi_va_arg ( ) ; # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/confdefs.h" # 2 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 2 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/conffix.h" # 3 "/tmp/petsc-zrcSd3/config.headers/conftest.c" stderr: PGC-F-0206-Can't find include file zmmintrin.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3) PGC/power Linux 19.9-0: compilation aborted Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:PGC-F-0206-Can't find include file zmmintrin.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3) PGC/power Linux 19.9-0: compilation aborted : Preprocess stderr after filtering:PGC-F-0206-Can't find include file zmmintrin.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3)PGC/power Linux 19.9-0: compilation aborted: ================================================================================ TEST checkRecursiveMacros from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:216) TESTING: checkRecursiveMacros from config.headers(config/BuildSystem/config/headers.py:216) Checks that the preprocessor allows recursive macros, and if not defines HAVE_BROKEN_RECURSIVE_MACRO Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.headers/conftest.o -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -g -fast /tmp/petsc-zrcSd3/config.headers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" void a(int i, int j) {} #define a(b) a(b,__LINE__) int main() { a(0); ; return 0; } child config.headers 9.055784 ================================================================================ TEST configureCacheDetails from config.utilities.cacheDetails(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/utilities/cacheDetails.py:78) TESTING: configureCacheDetails from config.utilities.cacheDetails(config/BuildSystem/config/utilities/cacheDetails.py:78) Try to determine the size and associativity of the cache. All intermediate test results are stored in /tmp/petsc-zrcSd3/config.utilities.cacheDetails Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.utilities.cacheDetails/conftest.o -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -g -fast /tmp/petsc-zrcSd3/config.utilities.cacheDetails/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include long getconf_LEVEL1_DCACHE_LINESIZE() { long val = sysconf(_SC_LEVEL1_DCACHE_LINESIZE); return (16 <= val && val <= 2147483647) ? val : 32; } int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.utilities.cacheDetails/conftest.o -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -g -fast /tmp/petsc-zrcSd3/config.utilities.cacheDetails/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include long getconf_LEVEL1_DCACHE_LINESIZE() { long val = sysconf(_SC_LEVEL1_DCACHE_LINESIZE); return (16 <= val && val <= 2147483647) ? val : 32; } int main() { FILE *output = fopen("conftestval","w"); if (!output) return 1; fprintf(output,"%ld",getconf_LEVEL1_DCACHE_LINESIZE()); fclose(output);; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.utilities.cacheDetails/conftest -g -fast /tmp/petsc-zrcSd3/config.utilities.cacheDetails/conftest.o -lstdc++ -ldl Testing executable /tmp/petsc-zrcSd3/config.utilities.cacheDetails/conftest to see if it can be run Executing: /tmp/petsc-zrcSd3/config.utilities.cacheDetails/conftest Running Executable with threads to time it out at 60 Executing: /tmp/petsc-zrcSd3/config.utilities.cacheDetails/conftest Defined "LEVEL1_DCACHE_LINESIZE" to "32" child config.utilities.cacheDetails 1.099595 ================================================================================ TEST check_struct_sigaction from config.types(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/types.py:43) TESTING: check_struct_sigaction from config.types(config/BuildSystem/config/types.py:43) Checks if "struct sigaction" exists in signal.h. This check is for C89 check. Checking for type: struct sigaction All intermediate test results are stored in /tmp/petsc-zrcSd3/config.types Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.types/conftest.o -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -g -fast /tmp/petsc-zrcSd3/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #include #include int main() { struct sigaction a;; return 0; } struct sigaction found Defined "HAVE_STRUCT_SIGACTION" to "1" ================================================================================ TEST check__int64 from config.types(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/types.py:49) TESTING: check__int64 from config.types(config/BuildSystem/config/types.py:49) Checks if __int64 exists. This is primarily for windows. Checking for type: __int64 Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.types/conftest.o -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -g -fast /tmp/petsc-zrcSd3/config.types/conftest.c Possible ERROR while running compiler: exit code 2 stderr: PGC-S-0040-Illegal use of symbol, __int64 (/tmp/petsc-zrcSd3/config.types/conftest.c: 11) PGC-W-0156-Type not specified, 'int' assumed (/tmp/petsc-zrcSd3/config.types/conftest.c: 11) PGC/power Linux 19.9-0: compilation completed with severe errors Source: #include "confdefs.h" #include "conffix.h" #include #include #include int main() { __int64 a;; return 0; } __int64 found ================================================================================ TEST checkSizeTypes from config.types(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/types.py:55) TESTING: checkSizeTypes from config.types(config/BuildSystem/config/types.py:55) Checks for types associated with sizes, such as size_t. Checking for type: size_t Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.types/conftest.o -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -g -fast /tmp/petsc-zrcSd3/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #include int main() { size_t a;; return 0; } size_t found ================================================================================ TEST checkFileTypes from config.types(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/types.py:65) TESTING: checkFileTypes from config.types(config/BuildSystem/config/types.py:65) Checks for types associated with files, such as mode_t, off_t, etc. Checking for type: mode_t Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.types/conftest.o -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -g -fast /tmp/petsc-zrcSd3/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #include int main() { mode_t a;; return 0; } mode_t found Checking for type: off_t Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.types/conftest.o -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -g -fast /tmp/petsc-zrcSd3/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #include int main() { off_t a;; return 0; } off_t found ================================================================================ TEST checkIntegerTypes from config.types(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/types.py:60) TESTING: checkIntegerTypes from config.types(config/BuildSystem/config/types.py:60) Checks for types associated with integers, such as int32_t. Checking for type: int32_t Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.types/conftest.o -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -g -fast /tmp/petsc-zrcSd3/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #include int main() { int32_t a;; return 0; } int32_t found ================================================================================ TEST checkPID from config.types(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/types.py:71) TESTING: checkPID from config.types(config/BuildSystem/config/types.py:71) Checks for pid_t, and defines it if necessary Checking for type: pid_t Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.types/conftest.o -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -g -fast /tmp/petsc-zrcSd3/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #include int main() { pid_t a;; return 0; } pid_t found ================================================================================ TEST checkUID from config.types(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/types.py:75) TESTING: checkUID from config.types(config/BuildSystem/config/types.py:75) Checks for uid_t and gid_t, and defines them if necessary Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.types/conftest.c ================================================================================ TEST checkC99Complex from config.types(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/types.py:82) TESTING: checkC99Complex from config.types(config/BuildSystem/config/types.py:82) Check for complex numbers in in C99 std Note that since PETSc source code uses _Complex we test specifically for that, not complex Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.types/conftest.o -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -g -fast /tmp/petsc-zrcSd3/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { double _Complex x; x = I; ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.types/conftest.o -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -g -fast /tmp/petsc-zrcSd3/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { double _Complex x; x = I; ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.types/conftest -g -fast /tmp/petsc-zrcSd3/config.types/conftest.o -lstdc++ -ldl Defined "HAVE_C99_COMPLEX" to "1" ================================================================================ TEST checkCxxComplex from config.types(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/types.py:93) TESTING: checkCxxComplex from config.types(config/BuildSystem/config/types.py:93) Check for complex numbers in namespace std Running Executable WITHOUT threads to time it out Executing: mpiCC -c -o /tmp/petsc-zrcSd3/config.types/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.compilers -g -fast -std=c++11 /tmp/petsc-zrcSd3/config.types/conftest.cc Possible ERROR while running compiler: stderr: "/tmp/petsc-zrcSd3/config.types/conftest.cc", line 6: warning: variable "x" was declared but never referenced std::complex x; ^ Source: #include "confdefs.h" #include "conffix.h" #include int main() { std::complex x; ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpiCC -o /tmp/petsc-zrcSd3/config.types/conftest -g -fast /tmp/petsc-zrcSd3/config.types/conftest.o -lstdc++ -ldl Defined "HAVE_CXX_COMPLEX" to "1" ================================================================================ TEST checkConst from config.types(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/types.py:104) TESTING: checkConst from config.types(config/BuildSystem/config/types.py:104) Checks for working const, and if not found defines it to empty string Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.types/conftest.o -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -g -fast /tmp/petsc-zrcSd3/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { /* Ultrix mips cc rejects this. */ typedef int charset[2]; const charset x; /* SunOS 4.1.1 cc rejects this. */ char const *const *ccp; char **p; /* NEC SVR4.0.2 mips cc rejects this. */ struct point {int x, y;}; static struct point const zero = {0,0}; /* AIX XL C 1.02.0.0 rejects this. It does not let you subtract one const X* pointer from another in an arm of an if-expression whose if-part is not a constant expression */ const char *g = "string"; ccp = &g + (g ? g-g : 0); /* HPUX 7.0 cc rejects these. */ ++ccp; p = (char**) ccp; ccp = (char const *const *) p; /* This section avoids unused variable warnings */ if (zero.x); if (x[0]); { /* SCO 3.2v4 cc rejects this. */ char *t; char const *s = 0 ? (char *) 0 : (char const *) 0; *t++ = 0; if (*s); } { /* Someone thinks the Sun supposedly-ANSI compiler will reject this. */ int x[] = {25, 17}; const int *foo = &x[0]; ++foo; } { /* Sun SC1.0 ANSI compiler rejects this -- but not the above. */ typedef const int *iptr; iptr p = 0; ++p; } { /* AIX XL C 1.02.0.0 rejects this saying "k.c", line 2.27: 1506-025 (S) Operand must be a modifiable lvalue. */ struct s { int j; const int *ap[3]; }; struct s *b; b->j = 5; } { /* ULTRIX-32 V3.1 (Rev 9) vcc rejects this */ const int foo = 10; /* Get rid of unused variable warning */ if (foo); } ; return 0; } ================================================================================ TEST checkSizeof from config.types(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/types.py:160) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:160) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: short Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.types/conftest.o -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -g -fast /tmp/petsc-zrcSd3/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #include #include char assert_sizeof[(sizeof(short)==2)*2-1]; Defined "SIZEOF_SHORT" to "2" ================================================================================ TEST checkSizeof from config.types(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/types.py:160) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:160) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: int Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.types/conftest.o -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -g -fast /tmp/petsc-zrcSd3/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #include #include char assert_sizeof[(sizeof(int)==4)*2-1]; Defined "SIZEOF_INT" to "4" ================================================================================ TEST checkSizeof from config.types(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/types.py:160) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:160) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: enum Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.types/conftest.o -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -g -fast /tmp/petsc-zrcSd3/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #include #include char assert_sizeof[(sizeof(enum{ENUM_DUMMY})==4)*2-1]; Defined "SIZEOF_ENUM" to "4" ================================================================================ TEST checkSizeof from config.types(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/types.py:160) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:160) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: long Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.types/conftest.o -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -g -fast /tmp/petsc-zrcSd3/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #include #include char assert_sizeof[(sizeof(long)==8)*2-1]; Defined "SIZEOF_LONG" to "8" ================================================================================ TEST checkSizeof from config.types(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/types.py:160) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:160) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: void * Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.types/conftest.o -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -g -fast /tmp/petsc-zrcSd3/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #include #include char assert_sizeof[(sizeof(void *)==8)*2-1]; Defined "SIZEOF_VOID_P" to "8" ================================================================================ TEST checkSizeof from config.types(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/types.py:160) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:160) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: long long Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.types/conftest.o -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -g -fast /tmp/petsc-zrcSd3/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #include #include char assert_sizeof[(sizeof(long long)==8)*2-1]; Defined "SIZEOF_LONG_LONG" to "8" ================================================================================ TEST checkSizeof from config.types(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/types.py:160) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:160) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: size_t Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.types/conftest.o -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -g -fast /tmp/petsc-zrcSd3/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #include #include char assert_sizeof[(sizeof(size_t)==8)*2-1]; Defined "SIZEOF_SIZE_T" to "8" ================================================================================ TEST checkVisibility from config.types(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/types.py:194) TESTING: checkVisibility from config.types(config/BuildSystem/config/types.py:194) Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.types/conftest.o -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -g -fast /tmp/petsc-zrcSd3/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { __attribute__((visibility ("default"))) int foo(void);; return 0; } Defined "USE_VISIBILITY_C" to "1" Running Executable WITHOUT threads to time it out Executing: mpiCC -c -o /tmp/petsc-zrcSd3/config.types/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.types -g -fast -std=c++11 /tmp/petsc-zrcSd3/config.types/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { __attribute__((visibility ("default"))) int foo(void);; return 0; } Defined "USE_VISIBILITY_CXX" to "1" child config.types 5.421914 ================================================================================ TEST configureMemAlign from PETSc.options.memAlign(/autofs/nccs-svm1_home1/adams/petsc_install/config/PETSc/options/memAlign.py:29) TESTING: configureMemAlign from PETSc.options.memAlign(config/PETSc/options/memAlign.py:29) Choose alignment Defined "MEMALIGN" to "16" Memory alignment is 16 child PETSc.options.memAlign 0.001630 ================================================================================ TEST check from config.libraries(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/libraries.py:157) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:157) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [handle_sigfpes] in library ['fpe'] [] Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.libraries/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char handle_sigfpes(); static void _check_handle_sigfpes() { handle_sigfpes(); } int main() { _check_handle_sigfpes();; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.libraries/conftest -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.o -lfpe -lstdc++ -ldl Possible ERROR while running linker: exit code 2 stderr: /usr/bin/ld: cannot find -lfpe ================================================================================ TEST check from config.libraries(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/libraries.py:157) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:157) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [socket] in library ['socket', 'nsl'] [] Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.libraries/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char socket(); static void _check_socket() { socket(); } int main() { _check_socket();; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.libraries/conftest -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.o -lsocket -lnsl -lstdc++ -ldl Possible ERROR while running linker: exit code 2 stderr: /usr/bin/ld: cannot find -lsocket ================================================================================ TEST check from config.libraries(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/libraries.py:157) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:157) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [handle_sigfpes] in library ['fpe'] [] Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.libraries/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char handle_sigfpes(); static void _check_handle_sigfpes() { handle_sigfpes(); } int main() { _check_handle_sigfpes();; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.libraries/conftest -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.o -lfpe -lstdc++ -ldl Possible ERROR while running linker: exit code 2 stderr: /usr/bin/ld: cannot find -lfpe ================================================================================ TEST check from config.libraries(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/libraries.py:157) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:157) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [socket] in library ['socket', 'nsl'] [] Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.libraries/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char socket(); static void _check_socket() { socket(); } int main() { _check_socket();; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.libraries/conftest -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.o -lsocket -lnsl -lstdc++ -ldl Possible ERROR while running linker: exit code 2 stderr: /usr/bin/ld: cannot find -lsocket ================================================================================ TEST checkMath from config.libraries(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/libraries.py:264) TESTING: checkMath from config.libraries(config/BuildSystem/config/libraries.py:264) Check for sin() in libm, the math library Checking for functions [sin floor log10 pow] in library [''] [] Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.libraries/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include double sin(double); static void _check_sin() { double x,y; scanf("%lf",&x); y = sin(x); printf("%f",y); ; } #include double floor(double); static void _check_floor() { double x,y; scanf("%lf",&x); y = floor(x); printf("%f",y); ; } #include double log10(double); static void _check_log10() { double x,y; scanf("%lf",&x); y = log10(x); printf("%f",y); ; } #include double pow(double, double); static void _check_pow() { double x,y; scanf("%lf",&x); y = pow(x,x); printf("%f",y); ; } int main() { _check_sin(); _check_floor(); _check_log10(); _check_pow();; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.libraries/conftest -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.o -lstdc++ -ldl CheckMath: using math library [] ================================================================================ TEST checkMathErf from config.libraries(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/libraries.py:283) TESTING: checkMathErf from config.libraries(config/BuildSystem/config/libraries.py:283) Check for erf() in libm, the math library Checking for functions [erf] in library [] [] Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.libraries/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_erf() { double (*checkErf)(double) = erf;double x = 0,y; y = (*checkErf)(x); } int main() { _check_erf();; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.libraries/conftest -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.o -lstdc++ -ldl erf() found Defined "HAVE_ERF" to "1" ================================================================================ TEST checkMathTgamma from config.libraries(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/libraries.py:292) TESTING: checkMathTgamma from config.libraries(config/BuildSystem/config/libraries.py:292) Check for tgamma() in libm, the math library Checking for functions [tgamma] in library [] [] Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.libraries/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_tgamma() { double (*checkTgamma)(double) = tgamma;double x = 0,y; y = (*checkTgamma)(x); } int main() { _check_tgamma();; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.libraries/conftest -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.o -lstdc++ -ldl tgamma() found Defined "HAVE_TGAMMA" to "1" ================================================================================ TEST checkMathFenv from config.libraries(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/libraries.py:301) TESTING: checkMathFenv from config.libraries(config/BuildSystem/config/libraries.py:301) Checks if can be used with FE_DFL_ENV Checking for functions [fesetenv] in library [] [] Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.libraries/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_fesetenv() { fesetenv(FE_DFL_ENV);; } int main() { _check_fesetenv();; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.libraries/conftest -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.o -lstdc++ -ldl Defined "HAVE_FENV_H" to "1" ================================================================================ TEST checkMathLog2 from config.libraries(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/libraries.py:309) TESTING: checkMathLog2 from config.libraries(config/BuildSystem/config/libraries.py:309) Check for log2() in libm, the math library Checking for functions [log2] in library [] [] Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.libraries/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_log2() { double (*checkLog2)(double) = log2; double x = 2.5, y = (*checkLog2)(x); } int main() { _check_log2();; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.libraries/conftest -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.o -lstdc++ -ldl log2() found Defined "HAVE_LOG2" to "1" ================================================================================ TEST checkRealtime from config.libraries(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/libraries.py:318) TESTING: checkRealtime from config.libraries(config/BuildSystem/config/libraries.py:318) Check for presence of clock_gettime() in realtime library (POSIX Realtime extensions) Checking for functions [clock_gettime] in library [''] [] Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.libraries/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_clock_gettime() { struct timespec tp; clock_gettime(CLOCK_REALTIME,&tp);; } int main() { _check_clock_gettime();; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.libraries/conftest -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.o -lstdc++ -ldl realtime functions are linked in by default ================================================================================ TEST checkDynamic from config.libraries(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/libraries.py:334) TESTING: checkDynamic from config.libraries(config/BuildSystem/config/libraries.py:334) Check for the header and libraries necessary for dynamic library manipulation Checking for functions [dlopen] in library ['dl'] [] Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.libraries/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dlopen(); static void _check_dlopen() { dlopen(); } int main() { _check_dlopen();; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.libraries/conftest -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.o -ldl -lstdc++ -ldl Defined "HAVE_LIBDL" to "1" Checking for header: dlfcn.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_DLFCN_H" to "1" child config.libraries 10.054794 ================================================================================ TEST configureLibraryOptions from PETSc.options.libraryOptions(/autofs/nccs-svm1_home1/adams/petsc_install/config/PETSc/options/libraryOptions.py:37) TESTING: configureLibraryOptions from PETSc.options.libraryOptions(config/PETSc/options/libraryOptions.py:37) Sets PETSC_USE_DEBUG, PETSC_USE_INFO, PETSC_USE_LOG, PETSC_USE_CTABLE, PETSC_USE_FORTRAN_KERNELS, and PETSC_USE_AVX512_KERNELS Defined "USE_LOG" to "1" Running Executable WITHOUT threads to time it out Executing: mpicc -qversion Defined "USE_MALLOC_COALESCED" to "1" Defined "USE_INFO" to "1" Defined "USE_CTABLE" to "1" Defined "USE_BACKWARD_LOOP" to "1" **********Checking if running on BGL/IBM detected Checking for functions [bgl_perfctr_void] in library [''] [] Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.libraries/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char bgl_perfctr_void(); static void _check_bgl_perfctr_void() { bgl_perfctr_void(); } int main() { _check_bgl_perfctr_void();; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.libraries/conftest -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.o -lstdc++ -ldl Possible ERROR while running linker: exit code 2 stderr: /tmp/petsc-zrcSd3/config.libraries/conftest.o: In function `main': /tmp/petsc-zrcSd3/config.libraries/conftest.c:10: undefined reference to `bgl_perfctr_void' /usr/bin/ld: link errors found, deleting executable `/tmp/petsc-zrcSd3/config.libraries/conftest' Checking for functions [ADIOI_BGL_Open] in library [''] [] Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.libraries/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char ADIOI_BGL_Open(); static void _check_ADIOI_BGL_Open() { ADIOI_BGL_Open(); } int main() { _check_ADIOI_BGL_Open();; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.libraries/conftest -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.o -lstdc++ -ldl Possible ERROR while running linker: exit code 2 stderr: /tmp/petsc-zrcSd3/config.libraries/conftest.o: In function `main': /tmp/petsc-zrcSd3/config.libraries/conftest.c:10: undefined reference to `ADIOI_BGL_Open' /usr/bin/ld: link errors found, deleting executable `/tmp/petsc-zrcSd3/config.libraries/conftest' *********BGL/IBM test failure Defined "USE_AVX512_KERNELS" to "1" Defined "Alignx(a,b)" to " " ================================================================================ TEST configureISColorValueType from PETSc.options.libraryOptions(/autofs/nccs-svm1_home1/adams/petsc_install/config/PETSc/options/libraryOptions.py:95) TESTING: configureISColorValueType from PETSc.options.libraryOptions(config/PETSc/options/libraryOptions.py:95) Sets PETSC_IS_COLOR_VALUE_TYPE, MPIU_COLORING_VALUE, IS_COLORING_MAX required by ISColor Defined "MPIU_COLORING_VALUE" to "MPI_UNSIGNED_SHORT" Defined "IS_COLORING_MAX" to "USHRT_MAX" Defined "IS_COLOR_VALUE_TYPE" to "short" Defined "IS_COLOR_VALUE_TYPE_F" to "integer2" child PETSc.options.libraryOptions 1.923423 child config.atomics 0.000006 ================================================================================ TEST checkSysinfo from config.functions(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/functions.py:106) TESTING: checkSysinfo from config.functions(config/BuildSystem/config/functions.py:106) Check whether sysinfo takes three arguments, and if it does define HAVE_SYSINFO_3ARG Checking for functions [sysinfo] All intermediate test results are stored in /tmp/petsc-zrcSd3/config.functions Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.functions/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -g -fast /tmp/petsc-zrcSd3/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char sysinfo(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_sysinfo) || defined (__stub___sysinfo) sysinfo_will_always_fail_with_ENOSYS(); #else sysinfo(); #endif ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.functions/conftest -g -fast /tmp/petsc-zrcSd3/config.functions/conftest.o -lstdc++ -ldl Defined "HAVE_SYSINFO" to "1" Checking for header: sys/sysinfo.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SYS_SYSINFO_H" to "1" Checking for header: sys/systeminfo.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 0 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 10 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 16 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 21 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 25 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 29 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 40 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 70 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" extern void * __builtin_return_address ( int ) ; extern void * __builtin_frame_address ( int ) ; # 79 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 83 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" typedef struct __va_list_tag { void * args ; } * __pgi_va_list ; # 108 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" void __builtin_pgi_va_start ( ) ; void * __builtin_pgi_va_arg ( ) ; # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/confdefs.h" # 2 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 2 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/conffix.h" # 3 "/tmp/petsc-zrcSd3/config.headers/conftest.c" stderr: PGC-F-0206-Can't find include file sys/systeminfo.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3) PGC/power Linux 19.9-0: compilation aborted Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:PGC-F-0206-Can't find include file sys/systeminfo.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3) PGC/power Linux 19.9-0: compilation aborted : Preprocess stderr after filtering:PGC-F-0206-Can't find include file sys/systeminfo.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3)PGC/power Linux 19.9-0: compilation aborted: Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.functions/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.functions -g -fast /tmp/petsc-zrcSd3/config.functions/conftest.c Possible ERROR while running compiler: exit code 2 stderr: PGC-F-0249-#error -- "Cannot check sysinfo without special headers" (/tmp/petsc-zrcSd3/config.functions/conftest.c: 9) PGC/power Linux 19.9-0: compilation aborted Source: #include "confdefs.h" #include "conffix.h" #ifdef HAVE_SYS_SYSINFO_H # include #elif defined(HAVE_SYS_SYSTEMINFO_H) # include #else # error "Cannot check sysinfo without special headers" #endif int main() { char buf[10]; long count=10; sysinfo(1, buf, count); ; return 0; } Compile failed inside link ================================================================================ TEST checkVPrintf from config.functions(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/functions.py:125) TESTING: checkVPrintf from config.functions(config/BuildSystem/config/functions.py:125) Checks whether vprintf requires a char * last argument, and if it does defines HAVE_VPRINTF_CHAR Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.functions/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.functions -g -fast /tmp/petsc-zrcSd3/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include int main() { va_list Argp; vprintf( "%d", Argp ); ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.functions/conftest -g -fast /tmp/petsc-zrcSd3/config.functions/conftest.o -lstdc++ -ldl ================================================================================ TEST checkVFPrintf from config.functions(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/functions.py:131) TESTING: checkVFPrintf from config.functions(config/BuildSystem/config/functions.py:131) Checks whether vfprintf requires a char * last argument, and if it does defines HAVE_VFPRINTF_CHAR Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.functions/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.functions -g -fast /tmp/petsc-zrcSd3/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include int main() { va_list Argp; vfprintf(stdout, "%d", Argp ); ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.functions/conftest -g -fast /tmp/petsc-zrcSd3/config.functions/conftest.o -lstdc++ -ldl ================================================================================ TEST checkVSNPrintf from config.functions(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/functions.py:137) TESTING: checkVSNPrintf from config.functions(config/BuildSystem/config/functions.py:137) Checks whether vsnprintf requires a char * last argument, and if it does defines HAVE_VSNPRINTF_CHAR Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.functions/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.functions -g -fast /tmp/petsc-zrcSd3/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include int main() { va_list Argp;char str[6]; vsnprintf(str,5, "%d", Argp ); ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.functions/conftest -g -fast /tmp/petsc-zrcSd3/config.functions/conftest.o -lstdc++ -ldl Defined "HAVE_VSNPRINTF" to "1" ================================================================================ TEST checkNanosleep from config.functions(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/functions.py:167) TESTING: checkNanosleep from config.functions(config/BuildSystem/config/functions.py:167) Check for functional nanosleep() - as time.h behaves differently for different compiler flags - like -std=c89 Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.functions/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.functions -g -fast /tmp/petsc-zrcSd3/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { struct timespec tp; tp.tv_sec = 0; tp.tv_nsec = (long)(1e9); nanosleep(&tp,0); ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.functions/conftest -g -fast /tmp/petsc-zrcSd3/config.functions/conftest.o -lstdc++ -ldl Defined "HAVE_NANOSLEEP" to "1" ================================================================================ TEST checkMemmove from config.functions(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/functions.py:173) TESTING: checkMemmove from config.functions(config/BuildSystem/config/functions.py:173) Check for functional memmove() - as MS VC requires correct includes to for this test Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.functions/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.functions -g -fast /tmp/petsc-zrcSd3/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { char c1[1], c2[1] = "c"; size_t n=1; memmove(c1,c2,n); ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.functions/conftest -g -fast /tmp/petsc-zrcSd3/config.functions/conftest.o -lstdc++ -ldl Defined "HAVE_MEMMOVE" to "1" ================================================================================ TEST checkSignalHandlerType from config.functions(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/functions.py:143) TESTING: checkSignalHandlerType from config.functions(config/BuildSystem/config/functions.py:143) Checks the type of C++ signals handlers, and defines SIGNAL_CAST to the correct value Running Executable WITHOUT threads to time it out Executing: mpiCC -c -o /tmp/petsc-zrcSd3/config.functions/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.functions -g -fast -std=c++11 /tmp/petsc-zrcSd3/config.functions/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include static void myhandler(int sig) {} int main() { signal(SIGFPE,myhandler); ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpiCC -o /tmp/petsc-zrcSd3/config.functions/conftest -g -fast /tmp/petsc-zrcSd3/config.functions/conftest.o -lstdc++ -ldl Defined "SIGNAL_CAST" to " " ================================================================================ TEST checkFreeReturnType from config.functions(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/functions.py:153) TESTING: checkFreeReturnType from config.functions(config/BuildSystem/config/functions.py:153) Checks whether free returns void or int, and defines HAVE_FREE_RETURN_INT Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.functions/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.functions -g -fast /tmp/petsc-zrcSd3/config.functions/conftest.c Possible ERROR while running compiler: exit code 2 stderr: PGC-S-0094-Illegal type conversion required (/tmp/petsc-zrcSd3/config.functions/conftest.c: 6) PGC/power Linux 19.9-0: compilation completed with severe errors Source: #include "confdefs.h" #include "conffix.h" #include int main() { int ierr; void *p; ierr = free(p); return 0; ; return 0; } Compile failed inside link ================================================================================ TEST checkVariableArgumentLists from config.functions(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/functions.py:159) TESTING: checkVariableArgumentLists from config.functions(config/BuildSystem/config/functions.py:159) Checks whether the variable argument list functionality is working Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.functions/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.functions -g -fast /tmp/petsc-zrcSd3/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { va_list l1, l2; va_copy(l1, l2); return 0; ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.functions/conftest -g -fast /tmp/petsc-zrcSd3/config.functions/conftest.o -lstdc++ -ldl Defined "HAVE_VA_COPY" to "1" ================================================================================ TEST checkClassify from config.functions(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/functions.py:85) TESTING: checkClassify from config.functions(config/BuildSystem/config/functions.py:85) Recursive decompose to rapidly classify functions as found or missing To confirm that a function is missing, we require a compile/link failure with only that function in a compilation unit. In contrast, we can confirm that many functions are present by compiling them all together in a large compilation unit. We optimistically compile everything together, then trim all functions that were named in the error message and bisect the result. The trimming is only an optimization to increase the likelihood of a big-batch compile succeeding; we do not rely on the compiler naming missing functions. Checking for functions [rand getdomainname _access snprintf realpath dlsym bzero _getcwd _pipe getwd uname _lseek sleep _sleep lseek usleep dlclose gethostname clock access _snprintf dlerror fork getpagesize sbreak memalign getcwd gethostbyname readlink _set_output_format PXFGETARG strcasecmp dlopen drand48 socket popen getrusage _mkdir time stricmp] Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.functions/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.functions -g -fast /tmp/petsc-zrcSd3/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char rand(); char getdomainname(); char _access(); char snprintf(); char realpath(); char dlsym(); char bzero(); char _getcwd(); char _pipe(); char getwd(); char uname(); char _lseek(); char sleep(); char _sleep(); char lseek(); char usleep(); char dlclose(); char gethostname(); char clock(); char access(); char _snprintf(); char dlerror(); char fork(); char getpagesize(); char sbreak(); char memalign(); char getcwd(); char gethostbyname(); char readlink(); char _set_output_format(); char PXFGETARG(); char strcasecmp(); char dlopen(); char drand48(); char socket(); char popen(); char getrusage(); char _mkdir(); char time(); char stricmp(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_rand) || defined (__stub___rand) rand_will_always_fail_with_ENOSYS(); #else rand(); #endif #if defined (__stub_getdomainname) || defined (__stub___getdomainname) getdomainname_will_always_fail_with_ENOSYS(); #else getdomainname(); #endif #if defined (__stub__access) || defined (__stub____access) _access_will_always_fail_with_ENOSYS(); #else _access(); #endif #if defined (__stub_snprintf) || defined (__stub___snprintf) snprintf_will_always_fail_with_ENOSYS(); #else snprintf(); #endif #if defined (__stub_realpath) || defined (__stub___realpath) realpath_will_always_fail_with_ENOSYS(); #else realpath(); #endif #if defined (__stub_dlsym) || defined (__stub___dlsym) dlsym_will_always_fail_with_ENOSYS(); #else dlsym(); #endif #if defined (__stub_bzero) || defined (__stub___bzero) bzero_will_always_fail_with_ENOSYS(); #else bzero(); #endif #if defined (__stub__getcwd) || defined (__stub____getcwd) _getcwd_will_always_fail_with_ENOSYS(); #else _getcwd(); #endif #if defined (__stub__pipe) || defined (__stub____pipe) _pipe_will_always_fail_with_ENOSYS(); #else _pipe(); #endif #if defined (__stub_getwd) || defined (__stub___getwd) getwd_will_always_fail_with_ENOSYS(); #else getwd(); #endif #if defined (__stub_uname) || defined (__stub___uname) uname_will_always_fail_with_ENOSYS(); #else uname(); #endif #if defined (__stub__lseek) || defined (__stub____lseek) _lseek_will_always_fail_with_ENOSYS(); #else _lseek(); #endif #if defined (__stub_sleep) || defined (__stub___sleep) sleep_will_always_fail_with_ENOSYS(); #else sleep(); #endif #if defined (__stub__sleep) || defined (__stub____sleep) _sleep_will_always_fail_with_ENOSYS(); #else _sleep(); #endif #if defined (__stub_lseek) || defined (__stub___lseek) lseek_will_always_fail_with_ENOSYS(); #else lseek(); #endif #if defined (__stub_usleep) || defined (__stub___usleep) usleep_will_always_fail_with_ENOSYS(); #else usleep(); #endif #if defined (__stub_dlclose) || defined (__stub___dlclose) dlclose_will_always_fail_with_ENOSYS(); #else dlclose(); #endif #if defined (__stub_gethostname) || defined (__stub___gethostname) gethostname_will_always_fail_with_ENOSYS(); #else gethostname(); #endif #if defined (__stub_clock) || defined (__stub___clock) clock_will_always_fail_with_ENOSYS(); #else clock(); #endif #if defined (__stub_access) || defined (__stub___access) access_will_always_fail_with_ENOSYS(); #else access(); #endif #if defined (__stub__snprintf) || defined (__stub____snprintf) _snprintf_will_always_fail_with_ENOSYS(); #else _snprintf(); #endif #if defined (__stub_dlerror) || defined (__stub___dlerror) dlerror_will_always_fail_with_ENOSYS(); #else dlerror(); #endif #if defined (__stub_fork) || defined (__stub___fork) fork_will_always_fail_with_ENOSYS(); #else fork(); #endif #if defined (__stub_getpagesize) || defined (__stub___getpagesize) getpagesize_will_always_fail_with_ENOSYS(); #else getpagesize(); #endif #if defined (__stub_sbreak) || defined (__stub___sbreak) sbreak_will_always_fail_with_ENOSYS(); #else sbreak(); #endif #if defined (__stub_memalign) || defined (__stub___memalign) memalign_will_always_fail_with_ENOSYS(); #else memalign(); #endif #if defined (__stub_getcwd) || defined (__stub___getcwd) getcwd_will_always_fail_with_ENOSYS(); #else getcwd(); #endif #if defined (__stub_gethostbyname) || defined (__stub___gethostbyname) gethostbyname_will_always_fail_with_ENOSYS(); #else gethostbyname(); #endif #if defined (__stub_readlink) || defined (__stub___readlink) readlink_will_always_fail_with_ENOSYS(); #else readlink(); #endif #if defined (__stub__set_output_format) || defined (__stub____set_output_format) _set_output_format_will_always_fail_with_ENOSYS(); #else _set_output_format(); #endif #if defined (__stub_PXFGETARG) || defined (__stub___PXFGETARG) PXFGETARG_will_always_fail_with_ENOSYS(); #else PXFGETARG(); #endif #if defined (__stub_strcasecmp) || defined (__stub___strcasecmp) strcasecmp_will_always_fail_with_ENOSYS(); #else strcasecmp(); #endif #if defined (__stub_dlopen) || defined (__stub___dlopen) dlopen_will_always_fail_with_ENOSYS(); #else dlopen(); #endif #if defined (__stub_drand48) || defined (__stub___drand48) drand48_will_always_fail_with_ENOSYS(); #else drand48(); #endif #if defined (__stub_socket) || defined (__stub___socket) socket_will_always_fail_with_ENOSYS(); #else socket(); #endif #if defined (__stub_popen) || defined (__stub___popen) popen_will_always_fail_with_ENOSYS(); #else popen(); #endif #if defined (__stub_getrusage) || defined (__stub___getrusage) getrusage_will_always_fail_with_ENOSYS(); #else getrusage(); #endif #if defined (__stub__mkdir) || defined (__stub____mkdir) _mkdir_will_always_fail_with_ENOSYS(); #else _mkdir(); #endif #if defined (__stub_time) || defined (__stub___time) time_will_always_fail_with_ENOSYS(); #else time(); #endif #if defined (__stub_stricmp) || defined (__stub___stricmp) stricmp_will_always_fail_with_ENOSYS(); #else stricmp(); #endif ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.functions/conftest -g -fast /tmp/petsc-zrcSd3/config.functions/conftest.o -lstdc++ -ldl Possible ERROR while running linker: exit code 2 stderr: /tmp/petsc-zrcSd3/config.functions/conftest.o: In function `main': /tmp/petsc-zrcSd3/config.functions/conftest.c:117: warning: the `getwd' function is dangerous and should not be used. /tmp/petsc-zrcSd3/config.functions/conftest.c:75: undefined reference to `_access' /tmp/petsc-zrcSd3/config.functions/conftest.c:105: undefined reference to `_getcwd' /tmp/petsc-zrcSd3/config.functions/conftest.c:111: undefined reference to `_pipe' /tmp/petsc-zrcSd3/config.functions/conftest.c:129: undefined reference to `_lseek' /tmp/petsc-zrcSd3/config.functions/conftest.c:141: undefined reference to `_sleep' /tmp/petsc-zrcSd3/config.functions/conftest.c:183: undefined reference to `_snprintf' /tmp/petsc-zrcSd3/config.functions/conftest.c:207: undefined reference to `sbreak' /tmp/petsc-zrcSd3/config.functions/conftest.c:237: undefined reference to `_set_output_format' /tmp/petsc-zrcSd3/config.functions/conftest.c:243: undefined reference to `PXFGETARG' /tmp/petsc-zrcSd3/config.functions/conftest.c:285: undefined reference to `_mkdir' /tmp/petsc-zrcSd3/config.functions/conftest.c:297: undefined reference to `stricmp' /usr/bin/ld: link errors found, deleting executable `/tmp/petsc-zrcSd3/config.functions/conftest' Checking for functions [rand getdomainname realpath dlsym bzero uname usleep dlclose gethostname clock dlerror] Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.functions/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.functions -g -fast /tmp/petsc-zrcSd3/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char rand(); char getdomainname(); char realpath(); char dlsym(); char bzero(); char uname(); char usleep(); char dlclose(); char gethostname(); char clock(); char dlerror(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_rand) || defined (__stub___rand) rand_will_always_fail_with_ENOSYS(); #else rand(); #endif #if defined (__stub_getdomainname) || defined (__stub___getdomainname) getdomainname_will_always_fail_with_ENOSYS(); #else getdomainname(); #endif #if defined (__stub_realpath) || defined (__stub___realpath) realpath_will_always_fail_with_ENOSYS(); #else realpath(); #endif #if defined (__stub_dlsym) || defined (__stub___dlsym) dlsym_will_always_fail_with_ENOSYS(); #else dlsym(); #endif #if defined (__stub_bzero) || defined (__stub___bzero) bzero_will_always_fail_with_ENOSYS(); #else bzero(); #endif #if defined (__stub_uname) || defined (__stub___uname) uname_will_always_fail_with_ENOSYS(); #else uname(); #endif #if defined (__stub_usleep) || defined (__stub___usleep) usleep_will_always_fail_with_ENOSYS(); #else usleep(); #endif #if defined (__stub_dlclose) || defined (__stub___dlclose) dlclose_will_always_fail_with_ENOSYS(); #else dlclose(); #endif #if defined (__stub_gethostname) || defined (__stub___gethostname) gethostname_will_always_fail_with_ENOSYS(); #else gethostname(); #endif #if defined (__stub_clock) || defined (__stub___clock) clock_will_always_fail_with_ENOSYS(); #else clock(); #endif #if defined (__stub_dlerror) || defined (__stub___dlerror) dlerror_will_always_fail_with_ENOSYS(); #else dlerror(); #endif ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.functions/conftest -g -fast /tmp/petsc-zrcSd3/config.functions/conftest.o -lstdc++ -ldl Defined "HAVE_RAND" to "1" Defined "HAVE_GETDOMAINNAME" to "1" Defined "HAVE_REALPATH" to "1" Defined "HAVE_DLSYM" to "1" Defined "HAVE_BZERO" to "1" Defined "HAVE_UNAME" to "1" Defined "HAVE_USLEEP" to "1" Defined "HAVE_DLCLOSE" to "1" Defined "HAVE_GETHOSTNAME" to "1" Defined "HAVE_CLOCK" to "1" Defined "HAVE_DLERROR" to "1" Checking for functions [fork getpagesize memalign gethostbyname readlink strcasecmp dlopen drand48 socket popen getrusage time] Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.functions/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.functions -g -fast /tmp/petsc-zrcSd3/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char fork(); char getpagesize(); char memalign(); char gethostbyname(); char readlink(); char strcasecmp(); char dlopen(); char drand48(); char socket(); char popen(); char getrusage(); char time(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_fork) || defined (__stub___fork) fork_will_always_fail_with_ENOSYS(); #else fork(); #endif #if defined (__stub_getpagesize) || defined (__stub___getpagesize) getpagesize_will_always_fail_with_ENOSYS(); #else getpagesize(); #endif #if defined (__stub_memalign) || defined (__stub___memalign) memalign_will_always_fail_with_ENOSYS(); #else memalign(); #endif #if defined (__stub_gethostbyname) || defined (__stub___gethostbyname) gethostbyname_will_always_fail_with_ENOSYS(); #else gethostbyname(); #endif #if defined (__stub_readlink) || defined (__stub___readlink) readlink_will_always_fail_with_ENOSYS(); #else readlink(); #endif #if defined (__stub_strcasecmp) || defined (__stub___strcasecmp) strcasecmp_will_always_fail_with_ENOSYS(); #else strcasecmp(); #endif #if defined (__stub_dlopen) || defined (__stub___dlopen) dlopen_will_always_fail_with_ENOSYS(); #else dlopen(); #endif #if defined (__stub_drand48) || defined (__stub___drand48) drand48_will_always_fail_with_ENOSYS(); #else drand48(); #endif #if defined (__stub_socket) || defined (__stub___socket) socket_will_always_fail_with_ENOSYS(); #else socket(); #endif #if defined (__stub_popen) || defined (__stub___popen) popen_will_always_fail_with_ENOSYS(); #else popen(); #endif #if defined (__stub_getrusage) || defined (__stub___getrusage) getrusage_will_always_fail_with_ENOSYS(); #else getrusage(); #endif #if defined (__stub_time) || defined (__stub___time) time_will_always_fail_with_ENOSYS(); #else time(); #endif ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.functions/conftest -g -fast /tmp/petsc-zrcSd3/config.functions/conftest.o -lstdc++ -ldl Defined "HAVE_FORK" to "1" Defined "HAVE_GETPAGESIZE" to "1" Defined "HAVE_MEMALIGN" to "1" Defined "HAVE_GETHOSTBYNAME" to "1" Defined "HAVE_READLINK" to "1" Defined "HAVE_STRCASECMP" to "1" Defined "HAVE_DLOPEN" to "1" Defined "HAVE_DRAND48" to "1" Defined "HAVE_SOCKET" to "1" Defined "HAVE_POPEN" to "1" Defined "HAVE_GETRUSAGE" to "1" Defined "HAVE_TIME" to "1" Checking for functions [_access] Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.functions/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.functions -g -fast /tmp/petsc-zrcSd3/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _access(); #ifdef __cplusplus } #endif int main() { #if defined (__stub__access) || defined (__stub____access) _access_will_always_fail_with_ENOSYS(); #else _access(); #endif ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.functions/conftest -g -fast /tmp/petsc-zrcSd3/config.functions/conftest.o -lstdc++ -ldl Possible ERROR while running linker: exit code 2 stderr: /tmp/petsc-zrcSd3/config.functions/conftest.o: In function `main': /tmp/petsc-zrcSd3/config.functions/conftest.c:24: undefined reference to `_access' /usr/bin/ld: link errors found, deleting executable `/tmp/petsc-zrcSd3/config.functions/conftest' Checking for functions [snprintf] Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.functions/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.functions -g -fast /tmp/petsc-zrcSd3/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char snprintf(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_snprintf) || defined (__stub___snprintf) snprintf_will_always_fail_with_ENOSYS(); #else snprintf(); #endif ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.functions/conftest -g -fast /tmp/petsc-zrcSd3/config.functions/conftest.o -lstdc++ -ldl Defined "HAVE_SNPRINTF" to "1" Checking for functions [_getcwd] Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.functions/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.functions -g -fast /tmp/petsc-zrcSd3/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _getcwd(); #ifdef __cplusplus } #endif int main() { #if defined (__stub__getcwd) || defined (__stub____getcwd) _getcwd_will_always_fail_with_ENOSYS(); #else _getcwd(); #endif ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.functions/conftest -g -fast /tmp/petsc-zrcSd3/config.functions/conftest.o -lstdc++ -ldl Possible ERROR while running linker: exit code 2 stderr: /tmp/petsc-zrcSd3/config.functions/conftest.o: In function `main': /tmp/petsc-zrcSd3/config.functions/conftest.c:24: undefined reference to `_getcwd' /usr/bin/ld: link errors found, deleting executable `/tmp/petsc-zrcSd3/config.functions/conftest' Checking for functions [_pipe] Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.functions/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.functions -g -fast /tmp/petsc-zrcSd3/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _pipe(); #ifdef __cplusplus } #endif int main() { #if defined (__stub__pipe) || defined (__stub____pipe) _pipe_will_always_fail_with_ENOSYS(); #else _pipe(); #endif ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.functions/conftest -g -fast /tmp/petsc-zrcSd3/config.functions/conftest.o -lstdc++ -ldl Possible ERROR while running linker: exit code 2 stderr: /tmp/petsc-zrcSd3/config.functions/conftest.o: In function `main': /tmp/petsc-zrcSd3/config.functions/conftest.c:24: undefined reference to `_pipe' /usr/bin/ld: link errors found, deleting executable `/tmp/petsc-zrcSd3/config.functions/conftest' Checking for functions [getwd] Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.functions/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.functions -g -fast /tmp/petsc-zrcSd3/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char getwd(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_getwd) || defined (__stub___getwd) getwd_will_always_fail_with_ENOSYS(); #else getwd(); #endif ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.functions/conftest -g -fast /tmp/petsc-zrcSd3/config.functions/conftest.o -lstdc++ -ldl Possible ERROR while running linker: stderr: /tmp/petsc-zrcSd3/config.functions/conftest.o: In function `main': /tmp/petsc-zrcSd3/config.functions/conftest.c:24: warning: the `getwd' function is dangerous and should not be used. Defined "HAVE_GETWD" to "1" Checking for functions [_lseek] Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.functions/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.functions -g -fast /tmp/petsc-zrcSd3/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _lseek(); #ifdef __cplusplus } #endif int main() { #if defined (__stub__lseek) || defined (__stub____lseek) _lseek_will_always_fail_with_ENOSYS(); #else _lseek(); #endif ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.functions/conftest -g -fast /tmp/petsc-zrcSd3/config.functions/conftest.o -lstdc++ -ldl Possible ERROR while running linker: exit code 2 stderr: /tmp/petsc-zrcSd3/config.functions/conftest.o: In function `main': /tmp/petsc-zrcSd3/config.functions/conftest.c:24: undefined reference to `_lseek' /usr/bin/ld: link errors found, deleting executable `/tmp/petsc-zrcSd3/config.functions/conftest' Checking for functions [sleep] Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.functions/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.functions -g -fast /tmp/petsc-zrcSd3/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char sleep(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_sleep) || defined (__stub___sleep) sleep_will_always_fail_with_ENOSYS(); #else sleep(); #endif ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.functions/conftest -g -fast /tmp/petsc-zrcSd3/config.functions/conftest.o -lstdc++ -ldl Defined "HAVE_SLEEP" to "1" Checking for functions [_sleep] Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.functions/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.functions -g -fast /tmp/petsc-zrcSd3/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _sleep(); #ifdef __cplusplus } #endif int main() { #if defined (__stub__sleep) || defined (__stub____sleep) _sleep_will_always_fail_with_ENOSYS(); #else _sleep(); #endif ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.functions/conftest -g -fast /tmp/petsc-zrcSd3/config.functions/conftest.o -lstdc++ -ldl Possible ERROR while running linker: exit code 2 stderr: /tmp/petsc-zrcSd3/config.functions/conftest.o: In function `main': /tmp/petsc-zrcSd3/config.functions/conftest.c:24: undefined reference to `_sleep' /usr/bin/ld: link errors found, deleting executable `/tmp/petsc-zrcSd3/config.functions/conftest' Checking for functions [lseek] Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.functions/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.functions -g -fast /tmp/petsc-zrcSd3/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char lseek(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_lseek) || defined (__stub___lseek) lseek_will_always_fail_with_ENOSYS(); #else lseek(); #endif ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.functions/conftest -g -fast /tmp/petsc-zrcSd3/config.functions/conftest.o -lstdc++ -ldl Defined "HAVE_LSEEK" to "1" Checking for functions [access] Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.functions/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.functions -g -fast /tmp/petsc-zrcSd3/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char access(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_access) || defined (__stub___access) access_will_always_fail_with_ENOSYS(); #else access(); #endif ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.functions/conftest -g -fast /tmp/petsc-zrcSd3/config.functions/conftest.o -lstdc++ -ldl Defined "HAVE_ACCESS" to "1" Checking for functions [_snprintf] Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.functions/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.functions -g -fast /tmp/petsc-zrcSd3/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _snprintf(); #ifdef __cplusplus } #endif int main() { #if defined (__stub__snprintf) || defined (__stub____snprintf) _snprintf_will_always_fail_with_ENOSYS(); #else _snprintf(); #endif ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.functions/conftest -g -fast /tmp/petsc-zrcSd3/config.functions/conftest.o -lstdc++ -ldl Possible ERROR while running linker: exit code 2 stderr: /tmp/petsc-zrcSd3/config.functions/conftest.o: In function `main': /tmp/petsc-zrcSd3/config.functions/conftest.c:24: undefined reference to `_snprintf' /usr/bin/ld: link errors found, deleting executable `/tmp/petsc-zrcSd3/config.functions/conftest' Checking for functions [sbreak] Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.functions/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.functions -g -fast /tmp/petsc-zrcSd3/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char sbreak(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_sbreak) || defined (__stub___sbreak) sbreak_will_always_fail_with_ENOSYS(); #else sbreak(); #endif ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.functions/conftest -g -fast /tmp/petsc-zrcSd3/config.functions/conftest.o -lstdc++ -ldl Possible ERROR while running linker: exit code 2 stderr: /tmp/petsc-zrcSd3/config.functions/conftest.o: In function `main': /tmp/petsc-zrcSd3/config.functions/conftest.c:24: undefined reference to `sbreak' /usr/bin/ld: link errors found, deleting executable `/tmp/petsc-zrcSd3/config.functions/conftest' Checking for functions [getcwd] Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.functions/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.functions -g -fast /tmp/petsc-zrcSd3/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char getcwd(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_getcwd) || defined (__stub___getcwd) getcwd_will_always_fail_with_ENOSYS(); #else getcwd(); #endif ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.functions/conftest -g -fast /tmp/petsc-zrcSd3/config.functions/conftest.o -lstdc++ -ldl Defined "HAVE_GETCWD" to "1" Checking for functions [_set_output_format] Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.functions/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.functions -g -fast /tmp/petsc-zrcSd3/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _set_output_format(); #ifdef __cplusplus } #endif int main() { #if defined (__stub__set_output_format) || defined (__stub____set_output_format) _set_output_format_will_always_fail_with_ENOSYS(); #else _set_output_format(); #endif ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.functions/conftest -g -fast /tmp/petsc-zrcSd3/config.functions/conftest.o -lstdc++ -ldl Possible ERROR while running linker: exit code 2 stderr: /tmp/petsc-zrcSd3/config.functions/conftest.o: In function `main': /tmp/petsc-zrcSd3/config.functions/conftest.c:24: undefined reference to `_set_output_format' /usr/bin/ld: link errors found, deleting executable `/tmp/petsc-zrcSd3/config.functions/conftest' Checking for functions [PXFGETARG] Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.functions/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.functions -g -fast /tmp/petsc-zrcSd3/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char PXFGETARG(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_PXFGETARG) || defined (__stub___PXFGETARG) PXFGETARG_will_always_fail_with_ENOSYS(); #else PXFGETARG(); #endif ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.functions/conftest -g -fast /tmp/petsc-zrcSd3/config.functions/conftest.o -lstdc++ -ldl Possible ERROR while running linker: exit code 2 stderr: /tmp/petsc-zrcSd3/config.functions/conftest.o: In function `main': /tmp/petsc-zrcSd3/config.functions/conftest.c:24: undefined reference to `PXFGETARG' /usr/bin/ld: link errors found, deleting executable `/tmp/petsc-zrcSd3/config.functions/conftest' Checking for functions [_mkdir] Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.functions/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.functions -g -fast /tmp/petsc-zrcSd3/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _mkdir(); #ifdef __cplusplus } #endif int main() { #if defined (__stub__mkdir) || defined (__stub____mkdir) _mkdir_will_always_fail_with_ENOSYS(); #else _mkdir(); #endif ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.functions/conftest -g -fast /tmp/petsc-zrcSd3/config.functions/conftest.o -lstdc++ -ldl Possible ERROR while running linker: exit code 2 stderr: /tmp/petsc-zrcSd3/config.functions/conftest.o: In function `main': /tmp/petsc-zrcSd3/config.functions/conftest.c:24: undefined reference to `_mkdir' /usr/bin/ld: link errors found, deleting executable `/tmp/petsc-zrcSd3/config.functions/conftest' Checking for functions [stricmp] Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.functions/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.functions -g -fast /tmp/petsc-zrcSd3/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char stricmp(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_stricmp) || defined (__stub___stricmp) stricmp_will_always_fail_with_ENOSYS(); #else stricmp(); #endif ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.functions/conftest -g -fast /tmp/petsc-zrcSd3/config.functions/conftest.o -lstdc++ -ldl Possible ERROR while running linker: exit code 2 stderr: /tmp/petsc-zrcSd3/config.functions/conftest.o: In function `main': /tmp/petsc-zrcSd3/config.functions/conftest.c:24: undefined reference to `stricmp' /usr/bin/ld: link errors found, deleting executable `/tmp/petsc-zrcSd3/config.functions/conftest' ================================================================================ TEST checkMmap from config.functions(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/functions.py:179) TESTING: checkMmap from config.functions(config/BuildSystem/config/functions.py:179) Check for functional mmap() to allocate shared memory and define HAVE_MMAP Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.functions/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.functions -g -fast /tmp/petsc-zrcSd3/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #include #include int main() { int fd; fd=open("/tmp/file",O_RDWR); mmap((void*)0,100,PROT_READ|PROT_WRITE,MAP_SHARED,fd,0); ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.functions/conftest -g -fast /tmp/petsc-zrcSd3/config.functions/conftest.o -lstdc++ -ldl Defined "HAVE_MMAP" to "1" child config.functions 27.676199 ================================================================================ TEST configureMemorySize from config.utilities.getResidentSetSize(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/utilities/getResidentSetSize.py:31) TESTING: configureMemorySize from config.utilities.getResidentSetSize(config/BuildSystem/config/utilities/getResidentSetSize.py:31) Try to determine how to measure the memory usage Defined "USE_PROC_FOR_SIZE" to "1" Using /proc for PetscMemoryGetCurrentUsage() child config.utilities.getResidentSetSize 0.001574 ================================================================================ TEST configureFortranCommandLine from config.utilities.fortranCommandLine(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/utilities/fortranCommandLine.py:27) TESTING: configureFortranCommandLine from config.utilities.fortranCommandLine(config/BuildSystem/config/utilities/fortranCommandLine.py:27) Check for the mechanism to retrieve command line arguments in Fortran Checking for functions [] in library [''] [] Running Executable WITHOUT threads to time it out Executing: mpif90 -c -o /tmp/petsc-zrcSd3/config.libraries/conftest.o -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.libraries -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.F90 Successful compile: Source: program main integer i character*(80) arg i = command_argument_count() call get_command_argument(i,arg) end Running Executable WITHOUT threads to time it out Executing: mpif90 -o /tmp/petsc-zrcSd3/config.libraries/conftest -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.o -lstdc++ -ldl Defined "HAVE_FORTRAN_GET_COMMAND_ARGUMENT" to "1" child config.utilities.fortranCommandLine 1.018029 ================================================================================ TEST configureFeatureTestMacros from config.utilities.featureTestMacros(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/utilities/featureTestMacros.py:13) TESTING: configureFeatureTestMacros from config.utilities.featureTestMacros(config/BuildSystem/config/utilities/featureTestMacros.py:13) Checks if certain feature test macros are support All intermediate test results are stored in /tmp/petsc-zrcSd3/config.utilities.featureTestMacros Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.utilities.featureTestMacros/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -g -fast /tmp/petsc-zrcSd3/config.utilities.featureTestMacros/conftest.c Possible ERROR while running compiler: exit code 2 stderr: PGC-F-0206-Can't find include file sysctl.h (/tmp/petsc-zrcSd3/config.utilities.featureTestMacros/conftest.c: 4) PGC/power Linux 19.9-0: compilation aborted Source: #include "confdefs.h" #include "conffix.h" #define _POSIX_C_SOURCE 200112L #include int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.utilities.featureTestMacros/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -g -fast /tmp/petsc-zrcSd3/config.utilities.featureTestMacros/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #define _BSD_SOURCE #include int main() { ; return 0; } Defined "_BSD_SOURCE" to "1" Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.utilities.featureTestMacros/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -g -fast /tmp/petsc-zrcSd3/config.utilities.featureTestMacros/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #define _DEFAULT_SOURCE #include int main() { ; return 0; } Defined "_DEFAULT_SOURCE" to "1" Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.utilities.featureTestMacros/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -g -fast /tmp/petsc-zrcSd3/config.utilities.featureTestMacros/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #define _GNU_SOURCE #include int main() { cpu_set_t mset; CPU_ZERO(&mset);; return 0; } Defined "_GNU_SOURCE" to "1" child config.utilities.featureTestMacros 0.528791 ================================================================================ TEST configureMissingUtypeTypedefs from config.utilities.missing(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/utilities/missing.py:55) TESTING: configureMissingUtypeTypedefs from config.utilities.missing(config/BuildSystem/config/utilities/missing.py:55) Checks if u_short is undefined All intermediate test results are stored in /tmp/petsc-zrcSd3/config.utilities.missing Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.utilities.missing/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -g -fast /tmp/petsc-zrcSd3/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { u_short foo; ; return 0; } ================================================================================ TEST configureMissingFunctions from config.utilities.missing(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/utilities/missing.py:61) TESTING: configureMissingFunctions from config.utilities.missing(config/BuildSystem/config/utilities/missing.py:61) Checks for SOCKETS ================================================================================ TEST configureMissingSignals from config.utilities.missing(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/utilities/missing.py:79) TESTING: configureMissingSignals from config.utilities.missing(config/BuildSystem/config/utilities/missing.py:79) Check for missing signals, and define MISSING_ if necessary Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.utilities.missing/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -g -fast /tmp/petsc-zrcSd3/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGABRT; if (i); ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.utilities.missing/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -g -fast /tmp/petsc-zrcSd3/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGALRM; if (i); ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.utilities.missing/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -g -fast /tmp/petsc-zrcSd3/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGBUS; if (i); ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.utilities.missing/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -g -fast /tmp/petsc-zrcSd3/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGCHLD; if (i); ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.utilities.missing/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -g -fast /tmp/petsc-zrcSd3/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGCONT; if (i); ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.utilities.missing/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -g -fast /tmp/petsc-zrcSd3/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGFPE; if (i); ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.utilities.missing/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -g -fast /tmp/petsc-zrcSd3/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGHUP; if (i); ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.utilities.missing/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -g -fast /tmp/petsc-zrcSd3/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGILL; if (i); ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.utilities.missing/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -g -fast /tmp/petsc-zrcSd3/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGINT; if (i); ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.utilities.missing/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -g -fast /tmp/petsc-zrcSd3/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGKILL; if (i); ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.utilities.missing/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -g -fast /tmp/petsc-zrcSd3/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGPIPE; if (i); ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.utilities.missing/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -g -fast /tmp/petsc-zrcSd3/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGQUIT; if (i); ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.utilities.missing/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -g -fast /tmp/petsc-zrcSd3/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGSEGV; if (i); ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.utilities.missing/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -g -fast /tmp/petsc-zrcSd3/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGSTOP; if (i); ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.utilities.missing/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -g -fast /tmp/petsc-zrcSd3/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGSYS; if (i); ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.utilities.missing/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -g -fast /tmp/petsc-zrcSd3/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGTERM; if (i); ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.utilities.missing/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -g -fast /tmp/petsc-zrcSd3/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGTRAP; if (i); ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.utilities.missing/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -g -fast /tmp/petsc-zrcSd3/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGTSTP; if (i); ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.utilities.missing/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -g -fast /tmp/petsc-zrcSd3/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGURG; if (i); ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.utilities.missing/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -g -fast /tmp/petsc-zrcSd3/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGUSR1; if (i); ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.utilities.missing/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -g -fast /tmp/petsc-zrcSd3/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGUSR2; if (i); ; return 0; } ================================================================================ TEST configureMissingGetdomainnamePrototype from config.utilities.missing(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/utilities/missing.py:96) TESTING: configureMissingGetdomainnamePrototype from config.utilities.missing(config/BuildSystem/config/utilities/missing.py:96) Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.utilities.missing/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -g -fast /tmp/petsc-zrcSd3/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #if !defined(_BSD_SOURCE) #define _BSD_SOURCE #endif #if !defined(_DEFAULT_SOURCE) #define _DEFAULT_SOURCE #endif #if !defined(_GNU_SOURCE) #define _GNU_SOURCE #endif #ifdef PETSC_HAVE_UNISTD_H #include #endif #ifdef PETSC_HAVE_NETDB_H #include #endif int main() { int (*getdomainname_ptr)(char*,size_t) = getdomainname; char test[10]; if (getdomainname_ptr(test,10)) return 1; ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpiCC -c -o /tmp/petsc-zrcSd3/config.utilities.missing/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.missing -g -fast -std=c++11 /tmp/petsc-zrcSd3/config.utilities.missing/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" #if !defined(_BSD_SOURCE) #define _BSD_SOURCE #endif #if !defined(_DEFAULT_SOURCE) #define _DEFAULT_SOURCE #endif #if !defined(_GNU_SOURCE) #define _GNU_SOURCE #endif #ifdef PETSC_HAVE_UNISTD_H #include #endif #ifdef PETSC_HAVE_NETDB_H #include #endif int main() { int (*getdomainname_ptr)(char*,size_t) = getdomainname; char test[10]; if (getdomainname_ptr(test,10)) return 1; ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpiCC -o /tmp/petsc-zrcSd3/config.utilities.missing/conftest -g -fast /tmp/petsc-zrcSd3/config.utilities.missing/conftest.o -lstdc++ -ldl ================================================================================ TEST configureMissingSrandPrototype from config.utilities.missing(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/utilities/missing.py:121) TESTING: configureMissingSrandPrototype from config.utilities.missing(config/BuildSystem/config/utilities/missing.py:121) Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.utilities.missing/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -g -fast /tmp/petsc-zrcSd3/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #if !defined(_BSD_SOURCE) #define _BSD_SOURCE #endif #if !defined(_DEFAULT_SOURCE) #define _DEFAULT_SOURCE #endif #if !defined(_GNU_SOURCE) #define _GNU_SOURCE #endif #include int main() { double (*drand48_ptr)(void) = drand48; void (*srand48_ptr)(long int) = srand48; long int seed=10; srand48_ptr(seed); if (drand48_ptr() > 0.5) return 1; ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpiCC -c -o /tmp/petsc-zrcSd3/config.utilities.missing/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.missing -g -fast -std=c++11 /tmp/petsc-zrcSd3/config.utilities.missing/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" #if !defined(_BSD_SOURCE) #define _BSD_SOURCE #endif #if !defined(_DEFAULT_SOURCE) #define _DEFAULT_SOURCE #endif #if !defined(_GNU_SOURCE) #define _GNU_SOURCE #endif #include int main() { double (*drand48_ptr)(void) = drand48; void (*srand48_ptr)(long int) = srand48; long int seed=10; srand48_ptr(seed); if (drand48_ptr() > 0.5) return 1; ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpiCC -o /tmp/petsc-zrcSd3/config.utilities.missing/conftest -g -fast /tmp/petsc-zrcSd3/config.utilities.missing/conftest.o -lstdc++ -ldl child config.utilities.missing 5.468899 ================================================================================ TEST configureFPTrap from config.utilities.FPTrap(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/utilities/FPTrap.py:27) TESTING: configureFPTrap from config.utilities.FPTrap(config/BuildSystem/config/utilities/FPTrap.py:27) Checking the handling of floating point traps Checking for header: sigfpe.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 0 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 10 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 16 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 21 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 25 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 29 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 40 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 70 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" extern void * __builtin_return_address ( int ) ; extern void * __builtin_frame_address ( int ) ; # 79 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 83 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" typedef struct __va_list_tag { void * args ; } * __pgi_va_list ; # 108 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" void __builtin_pgi_va_start ( ) ; void * __builtin_pgi_va_arg ( ) ; # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/confdefs.h" # 2 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 2 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/conffix.h" # 3 "/tmp/petsc-zrcSd3/config.headers/conftest.c" stderr: PGC-F-0206-Can't find include file sigfpe.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3) PGC/power Linux 19.9-0: compilation aborted Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:PGC-F-0206-Can't find include file sigfpe.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3) PGC/power Linux 19.9-0: compilation aborted : Preprocess stderr after filtering:PGC-F-0206-Can't find include file sigfpe.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3)PGC/power Linux 19.9-0: compilation aborted: Checking for header: fpxcp.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 0 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 10 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 16 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 21 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 25 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 29 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 40 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 70 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" extern void * __builtin_return_address ( int ) ; extern void * __builtin_frame_address ( int ) ; # 79 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 83 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" typedef struct __va_list_tag { void * args ; } * __pgi_va_list ; # 108 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" void __builtin_pgi_va_start ( ) ; void * __builtin_pgi_va_arg ( ) ; # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/confdefs.h" # 2 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 2 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/conffix.h" # 3 "/tmp/petsc-zrcSd3/config.headers/conftest.c" stderr: PGC-F-0206-Can't find include file fpxcp.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3) PGC/power Linux 19.9-0: compilation aborted Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:PGC-F-0206-Can't find include file fpxcp.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3) PGC/power Linux 19.9-0: compilation aborted : Preprocess stderr after filtering:PGC-F-0206-Can't find include file fpxcp.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3)PGC/power Linux 19.9-0: compilation aborted: Checking for header: floatingpoint.h Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 0 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 10 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 16 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 21 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 25 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 29 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 40 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 70 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" extern void * __builtin_return_address ( int ) ; extern void * __builtin_frame_address ( int ) ; # 79 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 83 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" typedef struct __va_list_tag { void * args ; } * __pgi_va_list ; # 108 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" void __builtin_pgi_va_start ( ) ; void * __builtin_pgi_va_arg ( ) ; # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/confdefs.h" # 2 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 2 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/conffix.h" # 3 "/tmp/petsc-zrcSd3/config.headers/conftest.c" stderr: PGC-F-0206-Can't find include file floatingpoint.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3) PGC/power Linux 19.9-0: compilation aborted Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:PGC-F-0206-Can't find include file floatingpoint.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3) PGC/power Linux 19.9-0: compilation aborted : Preprocess stderr after filtering:PGC-F-0206-Can't find include file floatingpoint.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3)PGC/power Linux 19.9-0: compilation aborted: child config.utilities.FPTrap 0.287162 ================================================================================ TEST configureScalarType from PETSc.options.scalarTypes(/autofs/nccs-svm1_home1/adams/petsc_install/config/PETSc/options/scalarTypes.py:40) TESTING: configureScalarType from PETSc.options.scalarTypes(config/PETSc/options/scalarTypes.py:40) Choose between real and complex numbers Scalar type is real All intermediate test results are stored in /tmp/petsc-zrcSd3/PETSc.options.scalarTypes Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/PETSc.options.scalarTypes/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -g -fast /tmp/petsc-zrcSd3/PETSc.options.scalarTypes/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { double b = 2.0; int a = isnormal(b); ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/PETSc.options.scalarTypes/conftest -g -fast /tmp/petsc-zrcSd3/PETSc.options.scalarTypes/conftest.o -lstdc++ -ldl Defined "HAVE_ISNORMAL" to "1" Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/PETSc.options.scalarTypes/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -g -fast /tmp/petsc-zrcSd3/PETSc.options.scalarTypes/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { double b = 2.0; int a = isnan(b); ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/PETSc.options.scalarTypes/conftest -g -fast /tmp/petsc-zrcSd3/PETSc.options.scalarTypes/conftest.o -lstdc++ -ldl Defined "HAVE_ISNAN" to "1" Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/PETSc.options.scalarTypes/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -g -fast /tmp/petsc-zrcSd3/PETSc.options.scalarTypes/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { double b = 2.0; int a = isinf(b); ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/PETSc.options.scalarTypes/conftest -g -fast /tmp/petsc-zrcSd3/PETSc.options.scalarTypes/conftest.o -lstdc++ -ldl Defined "HAVE_ISINF" to "1" ================================================================================ TEST configurePrecision from PETSc.options.scalarTypes(/autofs/nccs-svm1_home1/adams/petsc_install/config/PETSc/options/scalarTypes.py:81) TESTING: configurePrecision from PETSc.options.scalarTypes(config/PETSc/options/scalarTypes.py:81) Set the default real number precision for PETSc objects Checking C compiler works with __float128 Checking for functions [logq] in library ['quadmath'] [] Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.libraries/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.c Possible ERROR while running compiler: exit code 2 stderr: PGC-F-0206-Can't find include file quadmath.h (/tmp/petsc-zrcSd3/config.libraries/conftest.c: 4) PGC/power Linux 19.9-0: compilation aborted Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_logq() { __float128 f; logq(f);; } int main() { _check_logq();; return 0; } Compile failed inside link Defined "USE_REAL_DOUBLE" to "1" Defined make macro "PETSC_SCALAR_SIZE" to "64" Precision is double child PETSc.options.scalarTypes 2.922183 ================================================================================ TEST configureMkdir from config.programs(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/programs.py:22) TESTING: configureMkdir from config.programs(config/BuildSystem/config/programs.py:22) Make sure we can have mkdir automatically make intermediate directories Checking for program /sw/sources/lsf-tools/2.0/summit/bin/mkdir...not found Checking for program /sw/summit/xalt/1.2.0/bin/mkdir...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/bin/mkdir...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/cmake-3.15.2-xit2o3iepxvqbyku77lwcugufilztu7t/bin/mkdir...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/bin/mkdir...not found Checking for program /sw/summit/forge/20.0.1/bin/mkdir...not found Checking for program /sw/summit/cuda/10.1.243/bin/mkdir...not found Checking for program /opt/ibm/spectrumcomputing/lsf/10.1.0.9/linux3.10-glibc2.17-ppc64le-csm/bin/mkdir...not found Checking for program /usr/bin/mkdir...found Running Executable WITHOUT threads to time it out Executing: /usr/bin/mkdir -p .conftest/tmp Adding -p flag to /usr/bin/mkdir -p to automatically create directories Defined make macro "MKDIR" to "/usr/bin/mkdir -p" ================================================================================ TEST configureAutoreconf from config.programs(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/programs.py:44) TESTING: configureAutoreconf from config.programs(config/BuildSystem/config/programs.py:44) Check for autoreconf Checking for program /sw/sources/lsf-tools/2.0/summit/bin/autoreconf...not found Checking for program /sw/summit/xalt/1.2.0/bin/autoreconf...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/bin/autoreconf...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/cmake-3.15.2-xit2o3iepxvqbyku77lwcugufilztu7t/bin/autoreconf...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/bin/autoreconf...not found Checking for program /sw/summit/forge/20.0.1/bin/autoreconf...not found Checking for program /sw/summit/cuda/10.1.243/bin/autoreconf...not found Checking for program /opt/ibm/spectrumcomputing/lsf/10.1.0.9/linux3.10-glibc2.17-ppc64le-csm/bin/autoreconf...not found Checking for program /usr/bin/autoreconf...found All intermediate test results are stored in /tmp/petsc-zrcSd3/config.programs Running Executable WITHOUT threads to time it out Executing: ['/usr/bin/autoreconf'] autoreconf test successful! Checking for program /sw/sources/lsf-tools/2.0/summit/bin/libtoolize...not found Checking for program /sw/summit/xalt/1.2.0/bin/libtoolize...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/bin/libtoolize...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/cmake-3.15.2-xit2o3iepxvqbyku77lwcugufilztu7t/bin/libtoolize...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/bin/libtoolize...not found Checking for program /sw/summit/forge/20.0.1/bin/libtoolize...not found Checking for program /sw/summit/cuda/10.1.243/bin/libtoolize...not found Checking for program /opt/ibm/spectrumcomputing/lsf/10.1.0.9/linux3.10-glibc2.17-ppc64le-csm/bin/libtoolize...not found Checking for program /usr/bin/libtoolize...found ================================================================================ TEST configurePrograms from config.programs(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/programs.py:71) TESTING: configurePrograms from config.programs(config/BuildSystem/config/programs.py:71) Check for the programs needed to build and run PETSc Checking for program /sw/sources/lsf-tools/2.0/summit/bin/sh...not found Checking for program /sw/summit/xalt/1.2.0/bin/sh...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/bin/sh...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/cmake-3.15.2-xit2o3iepxvqbyku77lwcugufilztu7t/bin/sh...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/bin/sh...not found Checking for program /sw/summit/forge/20.0.1/bin/sh...not found Checking for program /sw/summit/cuda/10.1.243/bin/sh...not found Checking for program /opt/ibm/spectrumcomputing/lsf/10.1.0.9/linux3.10-glibc2.17-ppc64le-csm/bin/sh...not found Checking for program /usr/bin/sh...found Defined make macro "SHELL" to "/usr/bin/sh" Checking for program /sw/sources/lsf-tools/2.0/summit/bin/sed...not found Checking for program /sw/summit/xalt/1.2.0/bin/sed...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/bin/sed...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/cmake-3.15.2-xit2o3iepxvqbyku77lwcugufilztu7t/bin/sed...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/bin/sed...not found Checking for program /sw/summit/forge/20.0.1/bin/sed...not found Checking for program /sw/summit/cuda/10.1.243/bin/sed...not found Checking for program /opt/ibm/spectrumcomputing/lsf/10.1.0.9/linux3.10-glibc2.17-ppc64le-csm/bin/sed...not found Checking for program /usr/bin/sed...found Defined make macro "SED" to "/usr/bin/sed" Running Executable WITHOUT threads to time it out Executing: /usr/bin/sed -i s/sed/sd/g "/tmp/petsc-zrcSd3/config.programs/sed1" Adding SEDINPLACE cmd: /usr/bin/sed -i Defined make macro "SEDINPLACE" to "/usr/bin/sed -i" Checking for program /sw/sources/lsf-tools/2.0/summit/bin/mv...not found Checking for program /sw/summit/xalt/1.2.0/bin/mv...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/bin/mv...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/cmake-3.15.2-xit2o3iepxvqbyku77lwcugufilztu7t/bin/mv...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/bin/mv...not found Checking for program /sw/summit/forge/20.0.1/bin/mv...not found Checking for program /sw/summit/cuda/10.1.243/bin/mv...not found Checking for program /opt/ibm/spectrumcomputing/lsf/10.1.0.9/linux3.10-glibc2.17-ppc64le-csm/bin/mv...not found Checking for program /usr/bin/mv...found Defined make macro "MV" to "/usr/bin/mv" Checking for program /sw/sources/lsf-tools/2.0/summit/bin/cp...not found Checking for program /sw/summit/xalt/1.2.0/bin/cp...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/bin/cp...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/cmake-3.15.2-xit2o3iepxvqbyku77lwcugufilztu7t/bin/cp...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/bin/cp...not found Checking for program /sw/summit/forge/20.0.1/bin/cp...not found Checking for program /sw/summit/cuda/10.1.243/bin/cp...not found Checking for program /opt/ibm/spectrumcomputing/lsf/10.1.0.9/linux3.10-glibc2.17-ppc64le-csm/bin/cp...not found Checking for program /usr/bin/cp...found Defined make macro "CP" to "/usr/bin/cp" Checking for program /sw/sources/lsf-tools/2.0/summit/bin/grep...not found Checking for program /sw/summit/xalt/1.2.0/bin/grep...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/bin/grep...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/cmake-3.15.2-xit2o3iepxvqbyku77lwcugufilztu7t/bin/grep...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/bin/grep...not found Checking for program /sw/summit/forge/20.0.1/bin/grep...not found Checking for program /sw/summit/cuda/10.1.243/bin/grep...not found Checking for program /opt/ibm/spectrumcomputing/lsf/10.1.0.9/linux3.10-glibc2.17-ppc64le-csm/bin/grep...not found Checking for program /usr/bin/grep...found Defined make macro "GREP" to "/usr/bin/grep" Checking for program /sw/sources/lsf-tools/2.0/summit/bin/rm...not found Checking for program /sw/summit/xalt/1.2.0/bin/rm...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/bin/rm...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/cmake-3.15.2-xit2o3iepxvqbyku77lwcugufilztu7t/bin/rm...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/bin/rm...not found Checking for program /sw/summit/forge/20.0.1/bin/rm...not found Checking for program /sw/summit/cuda/10.1.243/bin/rm...not found Checking for program /opt/ibm/spectrumcomputing/lsf/10.1.0.9/linux3.10-glibc2.17-ppc64le-csm/bin/rm...not found Checking for program /usr/bin/rm...found Defined make macro "RM" to "/usr/bin/rm -f" Checking for program /sw/sources/lsf-tools/2.0/summit/bin/diff...not found Checking for program /sw/summit/xalt/1.2.0/bin/diff...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/bin/diff...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/cmake-3.15.2-xit2o3iepxvqbyku77lwcugufilztu7t/bin/diff...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/bin/diff...not found Checking for program /sw/summit/forge/20.0.1/bin/diff...not found Checking for program /sw/summit/cuda/10.1.243/bin/diff...not found Checking for program /opt/ibm/spectrumcomputing/lsf/10.1.0.9/linux3.10-glibc2.17-ppc64le-csm/bin/diff...not found Checking for program /usr/bin/diff...found Running Executable WITHOUT threads to time it out Executing: "/usr/bin/diff" -w "/tmp/petsc-zrcSd3/config.programs/diff1" "/tmp/petsc-zrcSd3/config.programs/diff2" Defined make macro "DIFF" to "/usr/bin/diff -w" Checking for program /usr/ucb/ps...not found Checking for program /usr/usb/ps...not found Checking for program /ccs/home/adams/petsc_install/lib/petsc/bin/win32fe/ps...not found Unable to find programs ['ps'] providing listing of each search directory to help debug Path provided in Python program Warning accessing /usr/ucb gives errors: [Errno 2] No such file or directory: '/usr/ucb' Warning accessing /usr/usb gives errors: [Errno 2] No such file or directory: '/usr/usb' Path provided by --with-executables-search-path ['win32fe.exe', 'win32feutils.dll'] Defined make macro "PYTHON" to "/usr/bin/python" Checking for program /sw/sources/lsf-tools/2.0/summit/bin/m4...not found Checking for program /sw/summit/xalt/1.2.0/bin/m4...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/bin/m4...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/cmake-3.15.2-xit2o3iepxvqbyku77lwcugufilztu7t/bin/m4...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/bin/m4...not found Checking for program /sw/summit/forge/20.0.1/bin/m4...not found Checking for program /sw/summit/cuda/10.1.243/bin/m4...not found Checking for program /opt/ibm/spectrumcomputing/lsf/10.1.0.9/linux3.10-glibc2.17-ppc64le-csm/bin/m4...not found Checking for program /usr/bin/m4...found Defined make macro "M4" to "/usr/bin/m4" child config.programs 1.933383 ================================================================================ TEST configureMake from config.packages.make(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/packages/make.py:87) TESTING: configureMake from config.packages.make(config/BuildSystem/config/packages/make.py:87) Check Guesses for GNU make Running Executable WITHOUT threads to time it out Executing: gmake --version stdout: GNU Make 3.82 Built for powerpc64le-redhat-linux-gnu Copyright (C) 2010 Free Software Foundation, Inc. License GPLv3+: GNU GPL version 3 or later This is free software: you are free to change and redistribute it. There is NO WARRANTY, to the extent permitted by law. =============================================================================== ***** WARNING: You have an older version of Gnu make, it will work, but may not support all the parallel testing options. You can install the latest Gnu make with your package manager, such as brew or macports, or use the --download-make option to get the latest Gnu make ***** =============================================================================== Checking for program /sw/sources/lsf-tools/2.0/summit/bin/gmake...not found Checking for program /sw/summit/xalt/1.2.0/bin/gmake...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/bin/gmake...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/cmake-3.15.2-xit2o3iepxvqbyku77lwcugufilztu7t/bin/gmake...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/bin/gmake...not found Checking for program /sw/summit/forge/20.0.1/bin/gmake...not found Checking for program /sw/summit/cuda/10.1.243/bin/gmake...not found Checking for program /opt/ibm/spectrumcomputing/lsf/10.1.0.9/linux3.10-glibc2.17-ppc64le-csm/bin/gmake...not found Checking for program /usr/bin/gmake...found Defined make macro "MAKE" to "/usr/bin/gmake" ================================================================================ TEST setupGNUMake from config.packages.make(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/packages/make.py:121) TESTING: setupGNUMake from config.packages.make(config/BuildSystem/config/packages/make.py:121) Setup other GNU make stuff Defined make rule "libc" with dependencies "${LIBNAME}(${OBJSC})" and code [] Defined make rule "libcxx" with dependencies "${LIBNAME}(${OBJSCXX})" and code [] Defined make rule "libcu" with dependencies "${LIBNAME}(${OBJSCU})" and code [] Defined make rule "libf" with dependencies "${OBJSF}" and code -${AR} ${AR_FLAGS} ${LIBNAME} ${OBJSF} Defined make macro "OMAKE_PRINTDIR " to "/usr/bin/gmake --print-directory" Defined make macro "OMAKE" to "/usr/bin/gmake --no-print-directory" Defined make macro "MAKE_PAR_OUT_FLG" to "" ================================================================================ TEST configureMakeNP from config.packages.make(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/packages/make.py:168) TESTING: configureMakeNP from config.packages.make(config/BuildSystem/config/packages/make.py:168) check no of cores on the build machine [perhaps to do make '-j ncores'] module multiprocessing found 128 cores: using make_np = 59 Defined make macro "MAKE_NP" to "59" Defined make macro "MAKE_TEST_NP" to "49" Defined make macro "MAKE_LOAD" to "166.4" Defined make macro "NPMAX" to "128" child config.packages.make 0.044227 ================================================================================ TEST alternateConfigureLibrary from config.packages.OpenMPI(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.OpenMPI(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.OpenMPI 0.000730 Running Executable WITHOUT threads to time it out Executing: uname -s stdout: Linux ================================================================================ TEST alternateConfigureLibrary from config.packages.MPICH(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.MPICH(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.MPICH 0.007435 ================================================================================ TEST checkDependencies from config.packages.MPI(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:837) TESTING: checkDependencies from config.packages.MPI(config/BuildSystem/config/package.py:837) ================================================================================ TEST configureLibrary from config.packages.MPI(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/packages/MPI.py:617) TESTING: configureLibrary from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:617) ================================================================================== Checking for a functional MPI Checking for library in Compiler specific search MPI: [] ================================================================================ TEST check from config.libraries(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/libraries.py:157) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:157) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [MPI_Init MPI_Comm_create] in library [] [] Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.libraries/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Init(); static void _check_MPI_Init() { MPI_Init(); } char MPI_Comm_create(); static void _check_MPI_Comm_create() { MPI_Comm_create(); } int main() { _check_MPI_Init(); _check_MPI_Comm_create();; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.libraries/conftest -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.o -lstdc++ -ldl Checking for optional headers [] in Compiler specific search MPI: [] ================================================================================ TEST checkInclude from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files [] in [] Found header files [] in [] Checking for headers ['mpi.h'] in Compiler specific search MPI: [] ================================================================================ TEST checkInclude from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['mpi.h'] in [] Checking include with compiler flags var CPPFLAGS [] Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Found header files ['mpi.h'] in [] ================================================================================ TEST checkMPIDistro from config.packages.MPI(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/packages/MPI.py:478) TESTING: checkMPIDistro from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:478) Determine if MPICH_NUMVERSION, OMPI_MAJOR_VERSION or MSMPI_VER exist in mpi.h Used for consistency checking of MPI installation at compile time All intermediate test results are stored in /tmp/petsc-zrcSd3/config.packages.MPI Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.packages.MPI/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -g -fast /tmp/petsc-zrcSd3/config.packages.MPI/conftest.c Possible ERROR while running compiler: exit code 2 stderr: PGC-S-0074-Non-constant expression in initializer (/tmp/petsc-zrcSd3/config.packages.MPI/conftest.c: 4) PGC-W-0093-Type cast required for this conversion of constant (/tmp/petsc-zrcSd3/config.packages.MPI/conftest.c: 4) PGC/power Linux 19.9-0: compilation completed with severe errors Source: #include "confdefs.h" #include "conffix.h" #include const char *mpich_ver = I_MPI_VERSION; int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.packages.MPI/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -g -fast /tmp/petsc-zrcSd3/config.packages.MPI/conftest.c Possible ERROR while running compiler: exit code 2 stderr: PGC-S-0074-Non-constant expression in initializer (/tmp/petsc-zrcSd3/config.packages.MPI/conftest.c: 4) PGC/power Linux 19.9-0: compilation completed with severe errors Source: #include "confdefs.h" #include "conffix.h" #include int mpich_ver = I_MPI_NUMVERSION; int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.packages.MPI/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -g -fast /tmp/petsc-zrcSd3/config.packages.MPI/conftest.c Possible ERROR while running compiler: exit code 2 stderr: PGC-S-0074-Non-constant expression in initializer (/tmp/petsc-zrcSd3/config.packages.MPI/conftest.c: 4) PGC/power Linux 19.9-0: compilation completed with severe errors Source: #include "confdefs.h" #include "conffix.h" #include int mpich_ver = MVAPICH2_NUMVERSION; int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.packages.MPI/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -g -fast /tmp/petsc-zrcSd3/config.packages.MPI/conftest.c Possible ERROR while running compiler: exit code 2 stderr: PGC-S-0074-Non-constant expression in initializer (/tmp/petsc-zrcSd3/config.packages.MPI/conftest.c: 4) PGC/power Linux 19.9-0: compilation completed with severe errors Source: #include "confdefs.h" #include "conffix.h" #include int mpich_ver = MPICH_NUMVERSION; int main() { ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.packages.MPI/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -g -fast /tmp/petsc-zrcSd3/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int ompi_major = OMPI_MAJOR_VERSION; int ompi_minor = OMPI_MINOR_VERSION; int ompi_release = OMPI_RELEASE_VERSION; int main() { ; return 0; } Preprocessing source: #include "confdefs.h" #include "conffix.h" #include int ompi_major = OMPI_MAJOR_VERSION; int ompi_minor = OMPI_MINOR_VERSION; int ompi_release = OMPI_RELEASE_VERSION; Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.packages.MPI/conftest.c Defined "HAVE_OMPI_MAJOR_VERSION" to "10" Defined "HAVE_OMPI_MINOR_VERSION" to "03" Defined "HAVE_OMPI_RELEASE_VERSION" to "01" ================================================================================ TEST configureMPI2 from config.packages.MPI(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/packages/MPI.py:253) TESTING: configureMPI2 from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:253) Check for functions added to the interface in MPI-2 Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.packages.MPI/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -g -fast /tmp/petsc-zrcSd3/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int flag;if (MPI_Finalized(&flag)); ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.packages.MPI/conftest -g -fast /tmp/petsc-zrcSd3/config.packages.MPI/conftest.o -lstdc++ -ldl Defined "HAVE_MPI_FINALIZED" to "1" Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.packages.MPI/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -g -fast /tmp/petsc-zrcSd3/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { if (MPI_Allreduce(MPI_IN_PLACE,0, 1, MPI_INT, MPI_SUM, MPI_COMM_SELF)); ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.packages.MPI/conftest -g -fast /tmp/petsc-zrcSd3/config.packages.MPI/conftest.o -lstdc++ -ldl Defined "HAVE_MPI_IN_PLACE" to "1" Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.packages.MPI/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -g -fast /tmp/petsc-zrcSd3/config.packages.MPI/conftest.c Possible ERROR while running compiler: stderr: PGC-W-0093-Type cast required for this conversion of constant (/tmp/petsc-zrcSd3/config.packages.MPI/conftest.c: 6) PGC/power Linux 19.9-0: compilation completed with warnings Source: #include "confdefs.h" #include "conffix.h" #include int main() { int count=2; int blocklens[2]={0,1}; MPI_Aint indices[2]={0,1}; MPI_Datatype old_types[2]={0,1}; MPI_Datatype *newtype = 0; if (MPI_Type_create_struct(count, blocklens, indices, old_types, newtype)); ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.packages.MPI/conftest -g -fast /tmp/petsc-zrcSd3/config.packages.MPI/conftest.o -lstdc++ -ldl Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.packages.MPI/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -g -fast /tmp/petsc-zrcSd3/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_Comm_errhandler_fn * p_err_fun = 0; MPI_Errhandler * p_errhandler = 0; if (MPI_Comm_create_errhandler(p_err_fun,p_errhandler)); ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.packages.MPI/conftest -g -fast /tmp/petsc-zrcSd3/config.packages.MPI/conftest.o -lstdc++ -ldl Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.packages.MPI/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -g -fast /tmp/petsc-zrcSd3/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { if (MPI_Comm_set_errhandler(MPI_COMM_WORLD,MPI_ERRORS_RETURN)); ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.packages.MPI/conftest -g -fast /tmp/petsc-zrcSd3/config.packages.MPI/conftest.o -lstdc++ -ldl Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.packages.MPI/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -g -fast /tmp/petsc-zrcSd3/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { if (MPI_Reduce_local(0, 0, 0, MPI_INT, MPI_SUM));; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.packages.MPI/conftest -g -fast /tmp/petsc-zrcSd3/config.packages.MPI/conftest.o -lstdc++ -ldl Defined "HAVE_MPI_REDUCE_LOCAL" to "1" Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.packages.MPI/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -g -fast /tmp/petsc-zrcSd3/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { char version[MPI_MAX_LIBRARY_VERSION_STRING];int verlen;if (MPI_Get_library_version(version,&verlen)); ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.packages.MPI/conftest -g -fast /tmp/petsc-zrcSd3/config.packages.MPI/conftest.o -lstdc++ -ldl Defined "HAVE_MPI_GET_LIBRARY_VERSION" to "1" Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.packages.MPI/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -g -fast /tmp/petsc-zrcSd3/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int base[100]; MPI_Win win; if (MPI_Win_create(base,100,4,MPI_INFO_NULL,MPI_COMM_WORLD,&win)); ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.packages.MPI/conftest -g -fast /tmp/petsc-zrcSd3/config.packages.MPI/conftest.o -lstdc++ -ldl Defined "HAVE_MPI_WIN_CREATE" to "1" Defined "HAVE_MPI_ONE_SIDED" to "1" ================================================================================ TEST configureMPI3 from config.packages.MPI(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/packages/MPI.py:298) TESTING: configureMPI3 from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:298) Check for functions added to the interface in MPI-3 Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.packages.MPI/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -g -fast /tmp/petsc-zrcSd3/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_Comm scomm; MPI_Aint size=128; int disp_unit=8,*baseptr; MPI_Win win; if (MPI_Comm_split_type(MPI_COMM_WORLD, MPI_COMM_TYPE_SHARED, 0, MPI_INFO_NULL, &scomm)); if (MPI_Win_allocate_shared(size,disp_unit,MPI_INFO_NULL,MPI_COMM_WORLD,&baseptr,&win)); if (MPI_Win_shared_query(win,0,&size,&disp_unit,&baseptr)); ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.packages.MPI/conftest -g -fast /tmp/petsc-zrcSd3/config.packages.MPI/conftest.o -lstdc++ -ldl Defined "HAVE_MPI_PROCESS_SHARED_MEMORY" to "1" Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.packages.MPI/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -g -fast /tmp/petsc-zrcSd3/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int send=0,recv,counts[2]={1,1},displs[2]={1,2}; MPI_Request req; if (MPI_Iscatter(&send,1,MPI_INT,&recv,1,MPI_INT,0,MPI_COMM_WORLD,&req)); if (MPI_Iscatterv(&send,counts,displs,MPI_INT,&recv,1,MPI_INT,0,MPI_COMM_WORLD,&req)); if (MPI_Igather(&send,1,MPI_INT,&recv,1,MPI_INT,0,MPI_COMM_WORLD,&req)); if (MPI_Igatherv(&send,1,MPI_INT,&recv,counts,displs,MPI_INT,0,MPI_COMM_WORLD,&req)); if (MPI_Iallgather(&send,1,MPI_INT,&recv,1,MPI_INT,MPI_COMM_WORLD,&req)); if (MPI_Iallgatherv(&send,1,MPI_INT,&recv,counts,displs,MPI_INT,MPI_COMM_WORLD,&req)); if (MPI_Ialltoall(&send,1,MPI_INT,&recv,1,MPI_INT,MPI_COMM_WORLD,&req)); ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.packages.MPI/conftest -g -fast /tmp/petsc-zrcSd3/config.packages.MPI/conftest.o -lstdc++ -ldl Defined "HAVE_MPI_NONBLOCKING_COLLECTIVES" to "1" Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.packages.MPI/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -g -fast /tmp/petsc-zrcSd3/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_Comm distcomm; MPI_Request req; if (MPI_Dist_graph_create_adjacent(MPI_COMM_WORLD,0,0,MPI_WEIGHTS_EMPTY,0,0,MPI_WEIGHTS_EMPTY,MPI_INFO_NULL,0,&distcomm)); if (MPI_Neighbor_alltoallv(0,0,0,MPI_INT,0,0,0,MPI_INT,distcomm)); if (MPI_Ineighbor_alltoallv(0,0,0,MPI_INT,0,0,0,MPI_INT,distcomm,&req)); ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.packages.MPI/conftest -g -fast /tmp/petsc-zrcSd3/config.packages.MPI/conftest.o -lstdc++ -ldl Defined "HAVE_MPI_NEIGHBORHOOD_COLLECTIVES" to "1" Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.packages.MPI/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -g -fast /tmp/petsc-zrcSd3/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #if defined(MPIX_CUDA_AWARE_SUPPORT) && MPIX_CUDA_AWARE_SUPPORT #else #error This OpenMPI is not CUDA-aware #endif int main() { ; return 0; } Defined "HAVE_MPI_GPU_AWARE" to "1" Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.packages.MPI/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -g -fast /tmp/petsc-zrcSd3/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int ptr[1]; MPI_Win win; if (MPI_Get_accumulate(ptr,1,MPI_INT,ptr,1,MPI_INT,0,0,1,MPI_INT,MPI_SUM,win)); ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.packages.MPI/conftest -g -fast /tmp/petsc-zrcSd3/config.packages.MPI/conftest.o -lstdc++ -ldl Defined "HAVE_MPI_GET_ACCUMULATE" to "1" Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.packages.MPI/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -g -fast /tmp/petsc-zrcSd3/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int ptr[1]; MPI_Win win; MPI_Request req; if (MPI_Rget(ptr,1,MPI_INT,0,1,1,MPI_INT,win,&req)); ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.packages.MPI/conftest -g -fast /tmp/petsc-zrcSd3/config.packages.MPI/conftest.o -lstdc++ -ldl Defined "HAVE_MPI_RGET" to "1" ================================================================================ TEST configureMPIEXEC from config.packages.MPI(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/packages/MPI.py:175) TESTING: configureMPIEXEC from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:175) Checking for location of mpiexec Checking for program /sw/sources/lsf-tools/2.0/summit/bin/jsrun...not found Checking for program /sw/summit/xalt/1.2.0/bin/jsrun...found Defined make macro "MPIEXEC" to "jsrun -g 1" Running Executable with threads to time it out at 60 Executing: jsrun -g 1 -n 1 printenv stdout: GIT_PS1_SHOWDIRTYSTATE=1 XDG_SESSION_ID=1185 SHELL=/bin/bash HISTSIZE=100 PETSC_ARCH=arch-summit-opt64-pgi-hypre-cuda SSH_CLIENT=160.91.202.152 38070 22 LC_ALL= USER=adams MAIL=/var/spool/mail/adams PATH=/sw/sources/lsf-tools/2.0/summit/bin:/sw/summit/xalt/1.2.0/bin:/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/bin:/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/cmake-3.15.2-xit2o3iepxvqbyku77lwcugufilztu7t/bin:/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/bin:/sw/summit/forge/20.0.1/bin:/sw/summit/cuda/10.1.243/bin:/opt/ibm/spectrumcomputing/lsf/10.1.0.9/linux3.10-glibc2.17-ppc64le-csm/bin:/usr/bin:/usr/sbin:/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/darshan-runtime-3.1.7-cnvxicgf5j4ap64qi6v5gxp67hmrjz43/bin:/sw/sources/hpss/bin:/opt/ibm/spectrumcomputing/lsf/10.1.0.9/linux3.10-glibc2.17-ppc64le-csm/etc:/opt/ibm/csm/bin:/usr/local/bin:/usr/local/sbin:/opt/ibm/flightlog/bin:/opt/ibutils/bin:/opt/ibm/spectrum_mpi/jsm_pmix/bin:/opt/puppetlabs/bin:/usr/lpp/mmfs/bin PWD=/autofs/nccs-svm1_home1/adams SHLVL=6 HOME=/ccs/home/adams LOGNAME=adams GIT_PS1_SHOWUPSTREAM=auto SSH_CONNECTION=160.91.202.152 38070 128.219.134.72 22 XDG_RUNTIME_DIR=/run/user/62983 PETSC_DIR=/ccs/home/adams/petsc _=/opt/ibm/spectrum_mpi/jsm_pmix/bin/jsrun LD_LIBRARY_PATH=/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/container/../lib/pami_port:/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/container/../lib:/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/container/../lib/pami_port:pami_port:/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/container/../lib:/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/container/../lib/pami_port:/opt/ibm/spectrum_mpi/jsm_pmix/lib/:/opt/ibm/spectrum_mpi/jsm_pmix/../lib/:/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib:/opt/ibm/csm/lib/:/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/netlib-lapack-3.8.0-osgnhlqnprebssng2vsxn3dtgmwfutbb/lib64:/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib:/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib:/sw/summit/cuda/10.1.243/lib64:/opt/ibm/spectrumcomputing/lsf/10.1.0.9/linux3.10-glibc2.17-ppc64le-csm/lib:/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/darshan-runtime-3.1.7-cnvxicgf5j4ap64qi6v5gxp67hmrjz43/lib JSM_ENABLE_CGROUP=1 PMIX_INSTALL_PREFIX=/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/container/.. JSM_NUM_THREADS=15 TMPDIR=/tmp JSM_TOP_SESSION_DIR=/tmp/jsm.a27n08.62983 JSM_LOG_PATH=/tmp/jsm.a27n08.62983/965196 PTS_LOG_PATH=/tmp/jsm.a27n08.62983/965196 JSM_BATCH_SESSION_DIR=/tmp/jsm.a27n08.62983/965196 PMIX_SYSTEM_TMPDIR=/tmp/jsm.a27n08.62983/965196 PMIX_SERVER_TMPDIR=/tmp/jsm.a27n08.62983/965196 JSM_ENV_VAR_SPINDLE_PORT=/tmp/jsm.a27n08.62983/965196/JSM_rm_port_62983_965196-spindle JSM_JSRUN_PORT=/tmp/jsm.a27n08.62983/965196/JSM_rm_port_62983_965196:1 CSM_LIB_PATH=/opt/ibm/csm/lib/libcsmi.so LSF_PTS_USOCK=@PTS_CLIENT.47515.1 LSF_PTS_IPSTR=10.134.2.70 PTS_PARENT_PID=47515 OMPI_MCA_orte_externally_bound=1 LMOD_FAMILY_COMPILER_VERSION=19.9 MANPATH=/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/share/man:/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/man:/sw/summit/cuda/10.1.243/doc/man:/sw/sources/hpss/man:/sw/summit/lmod/8.2.10/share/man:/opt/ibm/spectrumcomputing/lsf/10.1.0.9/man::/opt/puppetlabs/puppet/share/man XALT_ETC_DIR=/sw/summit/xalt/1.2.0/etc LSB_EXEC_CLUSTER=summit _ModuleTable003_=Il09e1siZm4iXT0iL3N3L3N1bW1pdC9tb2R1bGVmaWxlcy9zaXRlL2xpbnV4LXJoZWw3LXBwYzY0bGUvQ29yZS9kYXJzaGFuLXJ1bnRpbWUvMy4xLjcubHVhIixbImZ1bGxOYW1lIl09ImRhcnNoYW4tcnVudGltZS8zLjEuNyIsWyJsb2FkT3JkZXIiXT00LHByb3BUPXt9LFsic3RhY2tEZXB0aCJdPTEsWyJzdGF0dXMiXT0iYWN0aXZlIixbInVzZXJOYW1lIl09ImRhcnNoYW4tcnVudGltZSIsfSxmb3JnZT17WyJmbiJdPSIvc3cvc3VtbWl0L21vZHVsZWZpbGVzL2NvcmUvZm9yZ2UvMjAuMC4xIixbImZ1bGxOYW1lIl09ImZvcmdlLzIwLjAuMSIsWyJsb2FkT3JkZXIiXT03LHByb3BUPXt9LFsic3RhY2tEZXB0aCJdPTAsWyJzdGF0dXMiXT0iYWN0aXZlIixbInVzZXJOYW1lIl09 LSB_EFFECTIVE_RSRCREQ=1*{select[((LN) && (type == any))] order[r15s:pg] span[hosts=1] cu[type=rack:pref=config]}+42*{select[((CN) && (type == any))] order[r15s:pg] span[ptile=42] cu[type=rack:pref=config]} LSF_LOGDIR=/var/log/lsf LSF_LIM_API_NTRIES=1 __LMOD_REF_COUNT_MODULEPATH=/autofs/nccs-svm1_sw/summit/modulefiles/site/linux-rhel7-ppc64le/spectrum-mpi/10.3.1.2-20200121-zy6l7p3/pgi/19.9:1;/sw/summit/modulefiles/site/linux-rhel7-ppc64le/pgi-extensions:1;/autofs/nccs-svm1_sw/summit/modulefiles/site/linux-rhel7-ppc64le/pgi/19.9:1;/sw/summit/modulefiles/site/linux-rhel7-ppc64le/Core:1;/sw/summit/modulefiles/core:1 TERM=xterm LSB_BATCH_JID=967283 LMOD_ROOT=/sw/summit/lmod MODULEPATH_ROOT=/sw/summit/modulefiles LMOD_SYSTEM_DEFAULT_MODULES=DefApps LIBRARY_PATH=/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/netlib-lapack-3.8.0-osgnhlqnprebssng2vsxn3dtgmwfutbb/lib64:/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib:/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/darshan-runtime-3.1.7-cnvxicgf5j4ap64qi6v5gxp67hmrjz43/lib LSB_TRAPSIGS=trap # 15 10 12 2 1 LS_EXECCWD=/ccs/home/adams/petsc_install PAMI_IBV_ADAPTER_AFFINITY=1 LS_JOBPID=12107 LMOD_PKG=/sw/summit/lmod/8.2.10 LSB_MAX_NUM_PROCESSORS=43 LSB_JOBRES_CALLBACK=48997@batch5 LSF_SERVERDIR=/opt/ibm/spectrumcomputing/lsf/10.1.0.9/linux3.10-glibc2.17-ppc64le-csm/etc PAMI_ENABLE_STRIPING=0 LSB_JOBID=967283 LSB_JOB_EXECUSER=adams LMOD_VERSION=8.2.10 OMPI_FC=pgfortran LSB_JOBRES_PID=12107 OLCF_DARSHAN_RUNTIME_ROOT=/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/darshan-runtime-3.1.7-cnvxicgf5j4ap64qi6v5gxp67hmrjz43 SSH_TTY=/dev/pts/4 LSB_JOBNAME=Not_Specified _ModuleTable007_=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 __LMOD_REF_COUNT_CMAKE_PREFIX_PATH=/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/netlib-lapack-3.8.0-osgnhlqnprebssng2vsxn3dtgmwfutbb:1;/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656:1;/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/cmake-3.15.2-xit2o3iepxvqbyku77lwcugufilztu7t:1;/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc:1;/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/darshan-runtime-3.1.7-cnvxicgf5j4ap64qi6v5gxp67hmrjz43:1 __LMOD_REF_COUNT_LOADEDMODULES=hsi/5.0.2.p5:1;xalt/1.2.0:1;lsf-tools/2.0:1;darshan-runtime/3.1.7:1;DefApps:1;cuda/10.1.243:1;forge/20.0.1:1;pgi/19.9:1;cmake/3.15.2:1;spectrum-mpi/10.3.1.2-20200121:1;netlib-lapack/3.8.0:1 BSUB_BLOCK_EXEC_HOST= LSF_LIBDIR=/opt/ibm/spectrumcomputing/lsf/10.1.0.9/linux3.10-glibc2.17-ppc64le-csm/lib CUDA_TOOLKIT_ROOT_DIR=/sw/summit/cuda/10.1.243 OPAL_PREFIX=/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/container/.. 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PAMI_IBV_ENABLE_DCT=1 LSB_MCPU_HOSTS=batch5 1 a27n08 42 LSB_QUEUE=batch LSB_OUTDIR=/ccs/home/adams/petsc_install OLCF_SPECTRUM_MPI_ROOT=/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656 CVS_RSH=ssh XLSF_UIDDIR=/opt/ibm/spectrumcomputing/lsf/10.1.0.9/linux3.10-glibc2.17-ppc64le-csm/lib/uid MODULESHOME=/sw/summit/lmod/8.2.10 __LMOD_REF_COUNT_ACLOCAL_PATH=/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/cmake-3.15.2-xit2o3iepxvqbyku77lwcugufilztu7t/share/aclocal:1 __LMOD_REF_COUNT_LIBRARY_PATH=/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/netlib-lapack-3.8.0-osgnhlqnprebssng2vsxn3dtgmwfutbb/lib64:1;/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib:1;/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/darshan-runtime-3.1.7-cnvxicgf5j4ap64qi6v5gxp67hmrjz43/lib:1 JSM_JSRUN_NO_WARN_TOPOLOGY=1 LSB_ECHKPNT_RSH_CMD=ssh -o 'PasswordAuthentication no' -o 'StrictHostKeyChecking no' OMPI_CXX=pgc++ PKG_CONFIG_PATH=/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/netlib-lapack-3.8.0-osgnhlqnprebssng2vsxn3dtgmwfutbb/lib64/pkgconfig:/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/darshan-runtime-3.1.7-cnvxicgf5j4ap64qi6v5gxp67hmrjz43/lib/pkgconfig __LMOD_REF_COUNT_LD_LIBRARY_PATH=/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/netlib-lapack-3.8.0-osgnhlqnprebssng2vsxn3dtgmwfutbb/lib64:1;/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib:1;/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib:1;/sw/summit/cuda/10.1.243/lib64:1;/opt/ibm/spectrumcomputing/lsf/10.1.0.9/linux3.10-glibc2.17-ppc64le-csm/lib:1;/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/darshan-runtime-3.1.7-cnvxicgf5j4ap64qi6v5gxp67hmrjz43/lib:1 LMOD_SETTARG_FULL_SUPPORT=no LESSOPEN=||/usr/bin/lesspipe.sh %s LSF_CGROUP_TOPDIR_KEY=summit LMOD_MPI_VERSION=10.3.1.2-20200121-zy6l7p3 __Init_Default_Modules=1 OMPI_MCA_io=romio321 LMOD_FAMILY_COMPILER=pgi ACLOCAL_PATH=/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/cmake-3.15.2-xit2o3iepxvqbyku77lwcugufilztu7t/share/aclocal LSB_XFER_OP= XALT_OLCF=1 XL_LINKER=/sw/summit/xalt/1.2.0/bin/ld __LMOD_REF_COUNT_PKG_CONFIG_PATH=/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/netlib-lapack-3.8.0-osgnhlqnprebssng2vsxn3dtgmwfutbb/lib64/pkgconfig:1;/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/darshan-runtime-3.1.7-cnvxicgf5j4ap64qi6v5gxp67hmrjz43/lib/pkgconfig:1 DISPLAY=localhost:10.0 CMAKE_PREFIX_PATH=/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/netlib-lapack-3.8.0-osgnhlqnprebssng2vsxn3dtgmwfutbb:/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656:/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/cmake-3.15.2-xit2o3iepxvqbyku77lwcugufilztu7t:/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc:/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/darshan-runtime-3.1.7-cnvxicgf5j4ap64qi6v5gxp67hmrjz43 LSB_EEXEC_REAL_GID= OLCF_NETLIB_LAPACK_ROOT=/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/netlib-lapack-3.8.0-osgnhlqnprebssng2vsxn3dtgmwfutbb LMOD_DIR=/sw/summit/lmod/8.2.10/libexec CUDAPATH=/sw/summit/cuda/10.1.243 __LMOD_REF_COUNT_MANPATH=/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/share/man:1;/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/man:1;/sw/summit/cuda/10.1.243/doc/man:1;/sw/sources/hpss/man:1;/sw/summit/lmod/8.2.10/share/man:1;/opt/ibm/spectrumcomputing/lsf/10.1.0.9/man:1;/opt/puppetlabs/puppet/share/man:1 _ModuleTable006_=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 LSF_ENVDIR=/opt/ibm/spectrumcomputing/lsf/conf __LMOD_Priority_PATH=/sw/sources/lsf-tools/2.0/summit/bin:-9999;/sw/summit/xalt/1.2.0/bin:-9999 LSB_SHMODE=y LMOD_FAMILY_MPI=spectrum-mpi LSB_DJOB_RANKFILE=/ccs/home/adams/.lsbatch/1584057234.967283.hostfile BASH_FUNC_module()=() { eval $($LMOD_CMD bash "$@") && eval $(${LMOD_SETTARG_CMD:-:} -s sh) } BASH_FUNC_ml()=() { eval $($LMOD_DIR/ml_cmd "$@") } OMPI_MCA_opal_signal=6,7,8,11 OMPI_MCA_ess_base_forward_signals=6,10,11,12,14,18,21 OMPI_MCA_backtrace_lwcore_enable=0 OMPI_MCA_spml=ucx OMPI_MCA_spml_ucx_priority=80 OMPI_MCA_atomic=ucx OMPI_MCA_atomic_ucx_priority=80 OMPI_MCA_mpi_leave_pinned=1 OMPI_MCA_memory=patcher OMPI_MCA_mca_base_component_show_load_errors=0 OMPI_MCA_btl_openib_allow_ib=true OMPI_MCA_btl_openib_warn_default_gid_prefix=0 IBV_FORK_SAFE=1 OMPI_MCA_coll_tuned_priority=-1 PMIX_MCA_gds=ds21,hash OMPI_MCA_schizo_ompi_prepend_ld_library_path=pami_port:/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/container/../lib:/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/container/../lib/pami_port PAMI_IBV_SKIP_CQOVERFLOW_CHECK=1 OMPI_MCA_coll_hcoll_priority=-1 OMPI_MCA_coll_hcoll_enable=0 HCOLL_ALLREDUCE_ZCOPY_TUNE=static HCOLL_EXTERNAL_UCM_EVENTS=1 UCX_MEM_MMAP_HOOK_MODE=none OMPI_MCA_opal_common_ucx_opal_mem_hooks=1 OMPI_MCA_pml=pami OMPI_MCA_osc=pami OMPI_MCA_btl=self OMPI_MCA_bml=^r2 OMPI_LD_PRELOAD_POSTPEND_DISTRO=/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/container/../lib/libpami_cudahook.so OMPI_MCA_ompi_async_mpi_init=f OMPI_MCA_opal_pmix_base_async_modex=t OMPI_MCA_opal_pmix_base_collect_data=f OMPI_LD_LIBRARY_PATH_PREPEND_DISTRO=pami_port:/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/container/../lib:/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/container/../lib/pami_port OMPI_MCA_compress=^bzip,gzip OMPI_MCA_dfs=^app,orted,test OMPI_MCA_errmgr=default_app OMPI_MCA_oob=^ud OMPI_MCA_pmix=ext3x OMPI_MCA_routed=^direct,radix,debruijn,binomial OMPI_MCA_schizo=jsm OMPI_MCA_state=app OMPI_MCA_mca_base_env_list_distro=MPI_ROOT,OPAL_PREFIX,OPAL_LIBDIR,PMIX_INSTALL_PREFIX,IBV_FORK_SAFE,PMIX_MCA_ptl_tcp_handshake_wait_time,PMIX_MCA_ptl_tcp_handshake_max_retries,PMIX_MCA_gds,PAMI_IBV_SKIP_CQOVERFLOW_CHECK,HCOLL_ALLREDUCE_ZCOPY_TUNE,HCOLL_EXTERNAL_UCM_EVENTS,UCX_MEM_MMAP_HOOK_MODE,OMPI_LD_PRELOAD_POSTPEND_DISTRO,OMPI_LD_LIBRARY_PATH_PREPEND_DISTRO,SMPI_INTERNAL_MPIRUN_LAUNCH_JSM LD_PRELOAD=/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/darshan-runtime-3.1.7-cnvxicgf5j4ap64qi6v5gxp67hmrjz43/lib/libdarshan.so /autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/container/../lib/libpami_cudahook.so JSM_NAMESPACE_RANK=0 OMPI_COMM_WORLD_RANK=0 JSM_NAMESPACE_SIZE=1 OMPI_COMM_WORLD_SIZE=1 JSM_NAMESPACE_LOCAL_RANK=0 OMPI_COMM_WORLD_LOCAL_RANK=0 JSM_NAMESPACE_LOCAL_SIZE=1 OMPI_COMM_WORLD_LOCAL_SIZE=1 JSM_SMPI_SHARP_ID=-1169424383 OMP_PROC_BIND=true OMP_PLACES={0} OMP_NUM_THREADS=1 PMIX_NAMESPACE=1 PMIX_RANK=0 PMIX_SERVER_URI3=pmix-server.47515;tcp4://127.0.0.1:44835 PMIX_SERVER_URI2=pmix-server.47515;tcp4://127.0.0.1:44835 PMIX_SERVER_URI21=pmix-server.47515;tcp4://127.0.0.1:44835 PMIX_SECURITY_MODE=native PMIX_PTL_MODULE=tcp PMIX_BFROP_BUFFER_TYPE=PMIX_BFROP_BUFFER_NON_DESC PMIX_GDS_MODULE=ds21,ds12,hash PMIX_DSTORE_21_BASE_PATH=/tmp/jsm.a27n08.62983/965196/pmix_dstor_ds21_47515 PMIX_DSTORE_ESH_BASE_PATH=/tmp/jsm.a27n08.62983/965196/pmix_dstor_ds12_47515 CUDA_VISIBLE_DEVICES=0 JSM_GPU_ASSIGNMENTS=0 47740-CPU_ASSIGNMENTS=0 JSM_SMT_ASSIGNMENTS=0 Defined "HAVE_MPIEXEC_ENVIRONMENTAL_VARIABLE" to "OMP" Defined make macro "MPIEXEC" to "jsrun -g 1" Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.packages.MPI/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -g -fast /tmp/petsc-zrcSd3/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_Init(0,0); MPI_Finalize(); ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.packages.MPI/conftest -g -fast /tmp/petsc-zrcSd3/config.packages.MPI/conftest.o -lstdc++ -ldl Testing executable /tmp/petsc-zrcSd3/config.packages.MPI/conftest to see if it can be run Executing: jsrun -g 1 -n 1 /tmp/petsc-zrcSd3/config.packages.MPI/conftest Running Executable with threads to time it out at 60 Executing: jsrun -g 1 -n 1 /tmp/petsc-zrcSd3/config.packages.MPI/conftest ERROR while running executable: Could not execute "['jsrun -g 1 -n 1 /tmp/petsc-zrcSd3/config.packages.MPI/conftest']": Error (No such file or directory) executing process: /tmp/petsc-zrcSd3/config.packages.MPI/conftest ================================================================================ TEST configureMPITypes from config.packages.MPI(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/packages/MPI.py:345) TESTING: configureMPITypes from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:345) Checking for MPI Datatype handles Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.packages.MPI/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -g -fast /tmp/petsc-zrcSd3/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include int main() { int size; int ierr; MPI_Init(0,0); ierr = MPI_Type_size(MPI_LONG_DOUBLE, &size); if(ierr || (size == 0)) exit(1); MPI_Finalize(); ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.packages.MPI/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -g -fast /tmp/petsc-zrcSd3/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include int main() { int size; int ierr; MPI_Init(0,0); ierr = MPI_Type_size(MPI_LONG_DOUBLE, &size); if(ierr || (size == 0)) exit(1); MPI_Finalize(); ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.packages.MPI/conftest -g -fast /tmp/petsc-zrcSd3/config.packages.MPI/conftest.o -lstdc++ -ldl Testing executable /tmp/petsc-zrcSd3/config.packages.MPI/conftest to see if it can be run Executing: jsrun -g 1 -n 1 /tmp/petsc-zrcSd3/config.packages.MPI/conftest Running Executable with threads to time it out at 60 Executing: jsrun -g 1 -n 1 /tmp/petsc-zrcSd3/config.packages.MPI/conftest ERROR while running executable: Could not execute "['jsrun -g 1 -n 1 /tmp/petsc-zrcSd3/config.packages.MPI/conftest']": Error (No such file or directory) executing process: /tmp/petsc-zrcSd3/config.packages.MPI/conftest Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.packages.MPI/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -g -fast /tmp/petsc-zrcSd3/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include int main() { int size; int ierr; MPI_Init(0,0); ierr = MPI_Type_size(MPI_INT64_T, &size); if(ierr || (size == 0)) exit(1); MPI_Finalize(); ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.packages.MPI/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -g -fast /tmp/petsc-zrcSd3/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include int main() { int size; int ierr; MPI_Init(0,0); ierr = MPI_Type_size(MPI_INT64_T, &size); if(ierr || (size == 0)) exit(1); MPI_Finalize(); ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.packages.MPI/conftest -g -fast /tmp/petsc-zrcSd3/config.packages.MPI/conftest.o -lstdc++ -ldl Testing executable /tmp/petsc-zrcSd3/config.packages.MPI/conftest to see if it can be run Executing: jsrun -g 1 -n 1 /tmp/petsc-zrcSd3/config.packages.MPI/conftest Running Executable with threads to time it out at 60 Executing: jsrun -g 1 -n 1 /tmp/petsc-zrcSd3/config.packages.MPI/conftest ERROR while running executable: Could not execute "['jsrun -g 1 -n 1 /tmp/petsc-zrcSd3/config.packages.MPI/conftest']": Error (No such file or directory) executing process: /tmp/petsc-zrcSd3/config.packages.MPI/conftest Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.packages.MPI/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -g -fast /tmp/petsc-zrcSd3/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include int main() { int size; int ierr; MPI_Init(0,0); ierr = MPI_Type_size(MPI_C_DOUBLE_COMPLEX, &size); if(ierr || (size == 0)) exit(1); MPI_Finalize(); ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.packages.MPI/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -g -fast /tmp/petsc-zrcSd3/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include int main() { int size; int ierr; MPI_Init(0,0); ierr = MPI_Type_size(MPI_C_DOUBLE_COMPLEX, &size); if(ierr || (size == 0)) exit(1); MPI_Finalize(); ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.packages.MPI/conftest -g -fast /tmp/petsc-zrcSd3/config.packages.MPI/conftest.o -lstdc++ -ldl Testing executable /tmp/petsc-zrcSd3/config.packages.MPI/conftest to see if it can be run Executing: jsrun -g 1 -n 1 /tmp/petsc-zrcSd3/config.packages.MPI/conftest Running Executable with threads to time it out at 60 Executing: jsrun -g 1 -n 1 /tmp/petsc-zrcSd3/config.packages.MPI/conftest ERROR while running executable: Could not execute "['jsrun -g 1 -n 1 /tmp/petsc-zrcSd3/config.packages.MPI/conftest']": Error (No such file or directory) executing process: /tmp/petsc-zrcSd3/config.packages.MPI/conftest ================================================================================ TEST SGIMPICheck from config.packages.MPI(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/packages/MPI.py:406) TESTING: SGIMPICheck from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:406) Returns true if SGI MPI is used Checking for functions [MPI_SGI_barrier] in library [] [] Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.libraries/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.libraries -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_SGI_barrier(); static void _check_MPI_SGI_barrier() { MPI_SGI_barrier(); } int main() { _check_MPI_SGI_barrier();; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.libraries/conftest -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.o -lstdc++ -ldl Possible ERROR while running linker: exit code 2 stderr: /tmp/petsc-zrcSd3/config.libraries/conftest.o: In function `main': /tmp/petsc-zrcSd3/config.libraries/conftest.c:10: undefined reference to `MPI_SGI_barrier' /usr/bin/ld: link errors found, deleting executable `/tmp/petsc-zrcSd3/config.libraries/conftest' SGI MPI test failure ================================================================================ TEST CxxMPICheck from config.packages.MPI(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/packages/MPI.py:416) TESTING: CxxMPICheck from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:416) Make sure C++ can compile and link Checking for header mpi.h Checking for C++ MPI_Finalize() Checking for functions [MPI_Finalize] in library [] [] Running Executable WITHOUT threads to time it out Executing: mpiCC -c -o /tmp/petsc-zrcSd3/config.libraries/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/config.libraries -g -fast -std=c++11 /tmp/petsc-zrcSd3/config.libraries/conftest.cc Possible ERROR while running compiler: stderr: "/tmp/petsc-zrcSd3/config.libraries/conftest.cc", line 5: warning: variable "ierr" was set but never used static void _check_MPI_Finalize() { int ierr; ^ Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_MPI_Finalize() { int ierr; ierr = MPI_Finalize();; } int main() { _check_MPI_Finalize();; return 0; } Running Executable WITHOUT threads to time it out Executing: mpiCC -o /tmp/petsc-zrcSd3/config.libraries/conftest -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.o -lstdc++ -ldl ================================================================================ TEST FortranMPICheck from config.packages.MPI(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/packages/MPI.py:432) TESTING: FortranMPICheck from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:432) Make sure fortran include [mpif.h] and library symbols are found Checking for fortran mpi_init() Checking for functions [] in library [] [] Running Executable WITHOUT threads to time it out Executing: mpif90 -c -o /tmp/petsc-zrcSd3/config.libraries/conftest.o -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.libraries -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.F90 Successful compile: Source: program main #include "mpif.h" integer ierr call mpi_init(ierr) end Running Executable WITHOUT threads to time it out Executing: mpif90 -o /tmp/petsc-zrcSd3/config.libraries/conftest -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.o -lstdc++ -ldl Checking for mpi.mod Checking for functions [] in library [] [] Running Executable WITHOUT threads to time it out Executing: mpif90 -c -o /tmp/petsc-zrcSd3/config.libraries/conftest.o -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.libraries -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.F90 Successful compile: Source: program main use mpi integer ierr,rank call mpi_init(ierr) call mpi_comm_rank(MPI_COMM_WORLD,rank,ierr) end Running Executable WITHOUT threads to time it out Executing: mpif90 -o /tmp/petsc-zrcSd3/config.libraries/conftest -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.o -lstdc++ -ldl Defined "HAVE_MPI_F90MODULE" to "1" ================================================================================ TEST configureIO from config.packages.MPI(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/packages/MPI.py:454) TESTING: configureIO from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:454) Check for the functions in MPI/IO - Define HAVE_MPIIO if they are present - Some older MPI 1 implementations are missing these Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.packages.MPI/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.libraries -g -fast /tmp/petsc-zrcSd3/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_Aint lb, extent; if (MPI_Type_get_extent(MPI_INT, &lb, &extent)); MPI_File fh; void *buf; MPI_Status status; if (MPI_File_write_all(fh, buf, 1, MPI_INT, &status)); if (MPI_File_read_all(fh, buf, 1, MPI_INT, &status)); MPI_Offset disp; MPI_Info info; if (MPI_File_set_view(fh, disp, MPI_INT, MPI_INT, "", info)); if (MPI_File_open(MPI_COMM_SELF, "", 0, info, &fh)); if (MPI_File_close(&fh)); ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.packages.MPI/conftest -g -fast /tmp/petsc-zrcSd3/config.packages.MPI/conftest.o -lstdc++ -ldl Defined "HAVE_MPIIO" to "1" ================================================================================ TEST findMPIInc from config.packages.MPI(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/packages/MPI.py:558) TESTING: findMPIInc from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:558) Find MPI include paths from "mpicc -show" and use with CUDAC_FLAGS Running Executable WITHOUT threads to time it out Executing: mpicc -show stdout: pgcc -I/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/include -lpthread -L/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib -lmpiprofilesupport -lmpi_ibm compilers: Checking arg pgcc compilers: Checking arg -I/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/include compilers: Found include option: -I/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/include Running Executable WITHOUT threads to time it out Executing: nvcc -c -o /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers -ccbin pgc++ -I/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/include -Wno-deprecated-gpu-targets /tmp/petsc-zrcSd3/config.setCompilers/conftest.cu Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Added CUDA compiler flag -I/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/include compilers: Checking arg -lpthread compilers: Checking arg -L/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib compilers: Checking arg -lmpiprofilesupport compilers: Checking arg -lmpi_ibm ================================================================================ TEST PetscArchMPICheck from config.packages.MPI(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/packages/MPI.py:592) TESTING: PetscArchMPICheck from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:592) Checking for functions [MPI_Type_get_envelope MPI_Type_dup MPI_Init_thread MPI_Iallreduce MPI_Ibarrier MPI_Finalized MPI_Exscan MPI_Reduce_scatter MPI_Reduce_scatter_block] in library [] [] Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.libraries/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.libraries -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Type_get_envelope(); static void _check_MPI_Type_get_envelope() { MPI_Type_get_envelope(); } char MPI_Type_dup(); static void _check_MPI_Type_dup() { MPI_Type_dup(); } char MPI_Init_thread(); static void _check_MPI_Init_thread() { MPI_Init_thread(); } char MPI_Iallreduce(); static void _check_MPI_Iallreduce() { MPI_Iallreduce(); } char MPI_Ibarrier(); static void _check_MPI_Ibarrier() { MPI_Ibarrier(); } char MPI_Finalized(); static void _check_MPI_Finalized() { MPI_Finalized(); } char MPI_Exscan(); static void _check_MPI_Exscan() { MPI_Exscan(); } char MPI_Reduce_scatter(); static void _check_MPI_Reduce_scatter() { MPI_Reduce_scatter(); } char MPI_Reduce_scatter_block(); static void _check_MPI_Reduce_scatter_block() { MPI_Reduce_scatter_block(); } int main() { _check_MPI_Type_get_envelope(); _check_MPI_Type_dup(); _check_MPI_Init_thread(); _check_MPI_Iallreduce(); _check_MPI_Ibarrier(); _check_MPI_Finalized(); _check_MPI_Exscan(); _check_MPI_Reduce_scatter(); _check_MPI_Reduce_scatter_block();; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.libraries/conftest -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.o -lstdc++ -ldl Defined "HAVE_MPI_TYPE_GET_ENVELOPE" to "1" Defined "HAVE_MPI_TYPE_DUP" to "1" Defined "HAVE_MPI_INIT_THREAD" to "1" Defined "HAVE_MPI_IALLREDUCE" to "1" Defined "HAVE_MPI_IBARRIER" to "1" Defined "HAVE_MPI_FINALIZED" to "1" Defined "HAVE_MPI_EXSCAN" to "1" Defined "HAVE_MPI_REDUCE_SCATTER" to "1" Defined "HAVE_MPI_REDUCE_SCATTER_BLOCK" to "1" Checking for functions [MPIX_Iallreduce] in library [] [] Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.libraries/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.libraries -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPIX_Iallreduce(); static void _check_MPIX_Iallreduce() { MPIX_Iallreduce(); } int main() { _check_MPIX_Iallreduce();; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.libraries/conftest -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.o -lstdc++ -ldl Possible ERROR while running linker: exit code 2 stderr: /tmp/petsc-zrcSd3/config.libraries/conftest.o: In function `main': /tmp/petsc-zrcSd3/config.libraries/conftest.c:10: undefined reference to `MPIX_Iallreduce' /usr/bin/ld: link errors found, deleting executable `/tmp/petsc-zrcSd3/config.libraries/conftest' Checking for functions [MPIX_Ibarrier] in library [] [] Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.libraries/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.libraries -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPIX_Ibarrier(); static void _check_MPIX_Ibarrier() { MPIX_Ibarrier(); } int main() { _check_MPIX_Ibarrier();; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.libraries/conftest -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.o -lstdc++ -ldl Possible ERROR while running linker: exit code 2 stderr: /tmp/petsc-zrcSd3/config.libraries/conftest.o: In function `main': /tmp/petsc-zrcSd3/config.libraries/conftest.c:10: undefined reference to `MPIX_Ibarrier' /usr/bin/ld: link errors found, deleting executable `/tmp/petsc-zrcSd3/config.libraries/conftest' Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.packages.MPI/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.libraries -g -fast /tmp/petsc-zrcSd3/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int combiner = MPI_COMBINER_DUP;; return 0; } Defined "HAVE_MPI_COMBINER_DUP" to "1" Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.packages.MPI/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.libraries -g -fast /tmp/petsc-zrcSd3/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int combiner = MPI_COMBINER_CONTIGUOUS;; return 0; } Defined "HAVE_MPI_COMBINER_CONTIGUOUS" to "1" Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.packages.MPI/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.libraries -g -fast /tmp/petsc-zrcSd3/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int combiner = MPI_COMBINER_NAMED;; return 0; } Defined "HAVE_MPI_COMBINER_NAMED" to "1" ================================================================================ TEST checkVersion from config.packages.MPI(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:986) TESTING: checkVersion from config.packages.MPI(config/BuildSystem/config/package.py:986) Uses self.version, self.minversion, self.maxversion, self.versionname, and self.versioninclude to determine if package has required version Preprocessing source: #include "confdefs.h" #include "conffix.h" #include "mpi.h" ;petscpkgver(MPI_VERSION); Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.packages.MPI /tmp/petsc-zrcSd3/config.packages.MPI/conftest.c For mpi need 2 <= 3 <= ================================================================================ TEST checkSharedLibrary from config.packages.MPI(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:920) TESTING: checkSharedLibrary from config.packages.MPI(config/BuildSystem/config/package.py:920) By default we don't care about checking if the library is shared child config.packages.MPI 32.191454 ================================================================================ TEST alternateConfigureLibrary from config.packages.zstd(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.zstd(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.zstd 0.000863 ================================================================================ TEST alternateConfigureLibrary from config.packages.yaml(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.yaml(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.yaml 0.000750 ================================================================================ TEST configureLibrary from config.packages.valgrind(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:862) TESTING: configureLibrary from config.packages.valgrind(config/BuildSystem/config/package.py:862) Find an installation and check if it can work with PETSc ================================================================================== Checking for a functional valgrind Not checking for library in Compiler specific search VALGRIND: [] because no functions given to check for ================================================================================ TEST check from config.libraries(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/libraries.py:157) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:157) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names No functions to check for in library [] [] Checking for optional headers [] in Compiler specific search VALGRIND: [] ================================================================================ TEST checkInclude from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files [] in [] Found header files [] in [] Checking for headers ['valgrind/valgrind.h'] in Compiler specific search VALGRIND: [] ================================================================================ TEST checkInclude from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['valgrind/valgrind.h'] in [] Checking include with compiler flags var CPPFLAGS [] Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 0 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 10 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 16 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 21 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 25 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 29 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 40 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 70 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" extern void * __builtin_return_address ( int ) ; extern void * __builtin_frame_address ( int ) ; # 79 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 83 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" typedef struct __va_list_tag { void * args ; } * __pgi_va_list ; # 108 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" void __builtin_pgi_va_start ( ) ; void * __builtin_pgi_va_arg ( ) ; # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/confdefs.h" # 2 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 2 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/conffix.h" # 3 "/tmp/petsc-zrcSd3/config.headers/conftest.c" stderr: PGC-F-0206-Can't find include file valgrind/valgrind.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3) PGC/power Linux 19.9-0: compilation aborted Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:PGC-F-0206-Can't find include file valgrind/valgrind.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3) PGC/power Linux 19.9-0: compilation aborted : Preprocess stderr after filtering:PGC-F-0206-Can't find include file valgrind/valgrind.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3)PGC/power Linux 19.9-0: compilation aborted: Not checking for library in Package specific search directory VALGRIND: [] because no functions given to check for ================================================================================ TEST check from config.libraries(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/libraries.py:157) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:157) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names No functions to check for in library [] [] Checking for optional headers [] in Package specific search directory VALGRIND: ['/usr/local/include'] ================================================================================ TEST checkInclude from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files [] in ['/usr/local/include'] Found header files [] in ['/usr/local/include'] Checking for headers ['valgrind/valgrind.h'] in Package specific search directory VALGRIND: ['/usr/local/include'] ================================================================================ TEST checkInclude from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['valgrind/valgrind.h'] in ['/usr/local/include'] Checking include with compiler flags var CPPFLAGS ['/usr/local/include'] Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.headers -I/usr/local/include /tmp/petsc-zrcSd3/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 0 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 10 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 16 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 21 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 25 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 29 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 40 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 70 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" extern void * __builtin_return_address ( int ) ; extern void * __builtin_frame_address ( int ) ; # 79 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 83 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" typedef struct __va_list_tag { void * args ; } * __pgi_va_list ; # 108 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" void __builtin_pgi_va_start ( ) ; void * __builtin_pgi_va_arg ( ) ; # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/confdefs.h" # 2 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 2 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/conffix.h" # 3 "/tmp/petsc-zrcSd3/config.headers/conftest.c" stderr: PGC-F-0206-Can't find include file valgrind/valgrind.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3) PGC/power Linux 19.9-0: compilation aborted Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:PGC-F-0206-Can't find include file valgrind/valgrind.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3) PGC/power Linux 19.9-0: compilation aborted : Preprocess stderr after filtering:PGC-F-0206-Can't find include file valgrind/valgrind.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3)PGC/power Linux 19.9-0: compilation aborted: Not checking for library in Package specific search directory VALGRIND: [] because no functions given to check for ================================================================================ TEST check from config.libraries(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/libraries.py:157) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:157) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names No functions to check for in library [] [] Checking for optional headers [] in Package specific search directory VALGRIND: ['/usr/local/include'] ================================================================================ TEST checkInclude from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files [] in ['/usr/local/include'] Found header files [] in ['/usr/local/include'] Checking for headers ['valgrind/valgrind.h'] in Package specific search directory VALGRIND: ['/usr/local/include'] ================================================================================ TEST checkInclude from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['valgrind/valgrind.h'] in ['/usr/local/include'] Checking include with compiler flags var CPPFLAGS ['/usr/local/include'] Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.headers -I/usr/local/include /tmp/petsc-zrcSd3/config.headers/conftest.c Possible ERROR while running preprocessor: exit code 2 stdout: # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 0 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 10 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 16 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 21 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 25 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 29 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 40 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 70 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" extern void * __builtin_return_address ( int ) ; extern void * __builtin_frame_address ( int ) ; # 79 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" # 83 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" typedef struct __va_list_tag { void * args ; } * __pgi_va_list ; # 108 "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/include/_c_macros.h" void __builtin_pgi_va_start ( ) ; void * __builtin_pgi_va_arg ( ) ; # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/confdefs.h" # 2 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 2 "/tmp/petsc-zrcSd3/config.headers/conftest.c" # 1 "/tmp/petsc-zrcSd3/config.headers/conffix.h" # 3 "/tmp/petsc-zrcSd3/config.headers/conftest.c" stderr: PGC-F-0206-Can't find include file valgrind/valgrind.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3) PGC/power Linux 19.9-0: compilation aborted Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:PGC-F-0206-Can't find include file valgrind/valgrind.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3) PGC/power Linux 19.9-0: compilation aborted : Preprocess stderr after filtering:PGC-F-0206-Can't find include file valgrind/valgrind.h (/tmp/petsc-zrcSd3/config.headers/conftest.c: 3)PGC/power Linux 19.9-0: compilation aborted: VALGRIND: SearchDir DirPath not found.. skipping: /opt/local Running Executable WITHOUT threads to time it out Executing: uname -s stdout: Linux =============================================================================== It appears you do not have valgrind installed on your system. We HIGHLY recommend you install it from www.valgrind.org Or install valgrind-devel or equivalent using your package manager. Then rerun ./configure =============================================================================== child config.packages.valgrind 0.393684 ================================================================================ TEST alternateConfigureLibrary from config.packages.ssl(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.ssl(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.ssl 0.000890 ================================================================================ TEST alternateConfigureLibrary from config.packages.sprng(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.sprng(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.sprng 0.000743 PETSc clone, checking for Sowing Checking for program /sw/sources/lsf-tools/2.0/summit/bin/pdflatex...not found Checking for program /sw/summit/xalt/1.2.0/bin/pdflatex...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/bin/pdflatex...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/cmake-3.15.2-xit2o3iepxvqbyku77lwcugufilztu7t/bin/pdflatex...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/bin/pdflatex...not found Checking for program /sw/summit/forge/20.0.1/bin/pdflatex...not found Checking for program /sw/summit/cuda/10.1.243/bin/pdflatex...not found Checking for program /opt/ibm/spectrumcomputing/lsf/10.1.0.9/linux3.10-glibc2.17-ppc64le-csm/bin/pdflatex...not found Checking for program /usr/bin/pdflatex...found Defined make macro "PDFLATEX" to "/usr/bin/pdflatex" Checking for program /sw/sources/lsf-tools/2.0/summit/bin/bfort...not found Checking for program /sw/summit/xalt/1.2.0/bin/bfort...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/bin/bfort...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/cmake-3.15.2-xit2o3iepxvqbyku77lwcugufilztu7t/bin/bfort...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/bin/bfort...not found Checking for program /sw/summit/forge/20.0.1/bin/bfort...not found Checking for program /sw/summit/cuda/10.1.243/bin/bfort...not found Checking for program /opt/ibm/spectrumcomputing/lsf/10.1.0.9/linux3.10-glibc2.17-ppc64le-csm/bin/bfort...not found Checking for program /usr/bin/bfort...not found Checking for program /usr/sbin/bfort...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/darshan-runtime-3.1.7-cnvxicgf5j4ap64qi6v5gxp67hmrjz43/bin/bfort...not found Checking for program /sw/sources/hpss/bin/bfort...not found Checking for program /opt/ibm/spectrumcomputing/lsf/10.1.0.9/linux3.10-glibc2.17-ppc64le-csm/etc/bfort...not found Checking for program /opt/ibm/csm/bin/bfort...not found Checking for program /usr/local/bin/bfort...not found Checking for program /usr/local/sbin/bfort...not found Checking for program /opt/ibm/flightlog/bin/bfort...not found Checking for program /opt/ibutils/bin/bfort...not found Checking for program /opt/ibm/spectrum_mpi/jsm_pmix/bin/bfort...not found Checking for program /opt/puppetlabs/bin/bfort...not found Checking for program /usr/lpp/mmfs/bin/bfort...not found Checking for program /ccs/home/adams/petsc_install/lib/petsc/bin/win32fe/bfort...not found Unable to find programs ['bfort'] providing listing of each search directory to help debug Path provided in Python program Path provided by default path ['bsub', 'bjob', 'showusage'] ['mpirun', 'ibrun', 'ibrun.symm', 'aprun', 'jsrun', 'ld', 'xalt_helper_functions.sh'] ['shmemrun', 'profile2mat.pl', 'oshrun', 'oshmem_info', 'orterun', 'orted', 'orte-server', 'orte-info', 'orte-clean', 'ompi_info', 'ompi-server', 'ompi-clean', 'mpitool', 'mpirun', 'mpijob', 'mpiexec', 'jumpshot', 'get_nl_setting', 'efix', 'alias.pl', 'aggregate_profile.pl', 'stock', 'shmemfort', 'shmemcxx', 'shmemcc', 'shmemc++', 'shmemCC', 'oshfort', 'oshcxx', 'oshcc', 'oshc++', 'oshCC', 'ortecc', 'opal_wrapper', 'mpixlf', 'mpixlc', 'mpixlC', 'mpipgifort', 'mpipgicc', 'mpipgic++', 'mpifort', 'mpif90', 'mpif77', 'mpicxx', 'mpicc', 'mpic++', 'mpiCC', 'mpip-jsrun'] ['ccmake', 'cmake', 'ctest', 'cpack'] ['localrc', 'pgaccelerror', 'pgimport', 'pgacclnk', 'pgaccelinfo', 'pgnvd', 'pgexplain.xml', 'pgunzip', 'pgzip', 'pgsize', 'pgipa', 'pgicg', 'pgextract', 'pgappend', 'pgprepro', 'pgcpuid', 'pgprofrc', 'pgprof', 'pgf901-llvm_ex', 'pgf901-llvm', 'pgf90-llvm_ex', 'pgf902-llvm', 'pggpp2ex-llvm', 'pggpp2-llvm', 'pggpp1-llvm', 'pggdecode', 'pgc-llvm_ex', 'pgc-llvm', 'pgfortran', 'pgf90', 'pgc++', 'pgcc18', 'pgcc11', 'pgcc', 'pgnvvm', 'makelocalrc', 'pgnvdlinpowerrc', 'pgnvd64rc', 'pgnvdrc', '.pgnvdrc', 'acclinuxpower64rc', 'acc1rc', 'versionrc', 'powerversionrc', 'c++llvmrc', 'pgllvmrc', 'llvmrc', 'linpoweriparc', 'noiparc', 'iparc', 'pgftnrc', 'pgf90linpowerrc', 'pgc++linpowerrc', 'pgcclinpowerrc', 'linpowerrc', 'powerrc', 'cpprc', 'ccrc', 'fnativerc', 'nativerc', '.pgfortranrc', '.pgf90rc', '.pgc++rc', '.pgcc18rc', '.pgcc11rc', '.pgccrc', 'siterc'] ['ddt-debugger-mps', 'ddt', 'ddt-debugger', 'allinea-client', 'ddt-mpirun', 'forge-probe', 'forge', 'make-profiler-libraries', 'ddt-debugger-ll', 'map', 'ddt-client'] ['cuobjdump', 'cuda-gdb', 'cuda-gdbserver', 'gpu-library-advisor', 'cuda-memcheck', 'nsight', 'nsight_ee_plugins_manage.sh', 'nv-nsight-cu-cli', 'bin2c', 'crt', 'cudafe++', 'fatbinary', 'nvcc', 'nvcc.profile', 'nvlink', 'ptxas', 'nvdisasm', 'nvprof', 'nvprune', 'computeprof', 'nvvp', 'cuda-install-samples-10.1.sh'] ['brsvjob', 'lspasswd', 'bmgroup', 'bpost', 'btop', 'bclusters', 'lsplace', 'bjdepinfo', 'lsreghost', 'brsvs', 'bparams', 'bgadd', 'lsrun', 'lsload', 'breconfig', 'lsfrestart', 'bconf', 'bmod', 'bsub', 'lsunlockhost', 'bmodify', 'bread', 'bacct', 'lsfrsv', 'lsgrun', 'bslots', 'bapp', 'bjobs', 'lsmail', 'lsfstartup', 'lsmake4', 'lslockhost', 'lsfshutdown', 'bpeek', 'lsrun.sh', 'lslogin', 'bimages', 'bchkpnt', 'bwait', 'lsfhadoop.sh', 'bsla', 'brsvmod', 'lsrtasks', 'blimits', 'busers', 'bresources', 'bqueues', 'brequeue', 'bmg', 'lsrcp', 'lseligible', 'lshosts', 'lsloadadj', 'breboot', 'lsacct', 'lsclusters', 'bugroup', 'lsltasks', 'lsadmin', 'bstatus', 'bgbroker', 'bgdel', 'bentags', 'lsportcheck', 'brsvsub', 'lsf-start-spark.sh', 'bqc', 'bhpart', 'lsf-spark-shell.sh', 'lsmakerm', 'lsf-spark-submit.sh', 'brestart', 'bswitch', 'bjgroup', 'lsreconfig', 'lammpirun_wrapper', 'lsf-stop-spark.sh', 'badmin', 'bbot', 'bstop', 'lsinfo', 'brun', 'bhist', 'bhosts', 'bgmod', 'brsvadd', 'bkill', 'brlainfo', 'brsvdel', 'xagent', 'bresize', 'bmig', 'lsmon', 'lsid', 'bgpinfo', 'lsmake', 'bresume', 'blaunch', 'lsacctmrg'] ['sview', 'strigger', 'sstat', 'sshare', 'srun', 'sreport', 'squeue', 'sprio', 'smap', 'sinfo', 'sgather', 'sdiag', 'scontrol', 'scancel', 'sbcast', 'sbatch', 'sattach', 'salloc', 'sacctmgr', 'sacct', 'qsub', 'tracejob', 'qterm', 'qstop', 'qstat', 'qstart', 'qsig', 'qselect', 'qrun', 'qrls', 'qrerun', 'qorder', 'qnodes', 'qmsg', 'qmove', 'qmgr', 'qhold', 'qgpureset', 'qgpumode', 'qenable', 'qdisable', 'qdel', 'qchkpt', 'qalter', 'printtracking', 'printserverdb', 'printjob', 'pbsnodes', 'pbsdsh', 'pbs_track', 'nqs2pbs', 'hostn', 'chk_tree', 'jobsub', 'jobstat', 'ctags', 'diffstat', 'rpmsign', 'swig', 'ccache-swig', 'ocs', 'cscope-indexer', 'cscope', 'doxygen', 'unwrapdiff', 'splitdiff', 'rediff', 'recountdiff', 'lsdiff', 'interdiff', 'grepdiff', 'flipdiff', 'fixcvsdiff', 'filterdiff', 'espdiff', 'editdiff', 'dehtmldiff', 'combinediff', 'yacc', 'byacc', 'indent', 'rlog', 'rcsmerge', 'rcsfreeze', 'rcsdiff', 'rcsclean', 'rcs', 'merge', 'ident', 'co', 'ci', 'svnversion', 'svnsync', 'svnserve', 'svnrdump', 'svnlook', 'svndumpfilter', 'svnadmin', 'svn', 'intltoolize', 'intltool-update', 'intltool-prepare', 'intltool-merge', 'intltool-extract', 'gettextize', 'autopoint', 'stap-report', 'stapsh', 'staprun', 'stap-merge', 'stap-prep', 'stap', 'screen', 'rhn_register', 'whiptail', 'subscription-manager', 'rhsmcertd', 'rhsm-debug', 'rct', 'consolehelper', 'pyinotify', 'easy_install-2.7', 'easy_install', 'snmpwalk', 'snmpvacm', 'snmpusm', 'snmptrap', 'snmptranslate', 'snmptls', 'snmptest', 'snmptable', 'snmpstatus', 'snmpset', 'snmpnetstat', 'snmpinform', 'snmpgetnext', 'snmpget', 'snmpdf', 'snmpdelta', 'snmpbulkwalk', 'snmpbulkget', 'encode_keychange', 'chardetect', 'atopsar', 'atopd', 'atopconvert', 'atop', 'abrt-dump-oops', 'abrt-action-save-kernel-data', 'abrt-action-analyze-oops', 'abrt-action-trim-files', 'abrt-action-perform-ccpp-analysis', 'abrt-action-list-dsos', 'abrt-action-install-debuginfo', 'abrt-action-generate-core-backtrace', 'abrt-action-generate-backtrace', 'abrt-action-analyze-vulnerability', 'abrt-action-analyze-core', 'abrt-action-analyze-ccpp-local', 'abrt-action-analyze-c', 'abrt-action-analyze-backtrace', 'abrt-watch-log', 'abrt-handle-upload', 'abrt-action-save-package-data', 'abrt-action-notify', 'abrt-action-analyze-xorg', 'reporter-ureport', 'reporter-rhtsupport', 'libtar', 'satyr', 'orig', 'git', 'git-receive-pack', 'git-upload-archive', 'git-upload-pack', 'git-shell', 'lex', 'tset', 'pk12util', 'as', 'lpr.cups', 'speaker-test', 'manpath', 'hwloc-gather-topology', 'hwloc-calc', 'rev', 'snmpconf', 'sctp_darn', 'trust', 'nm', 'fc-pattern', 'ucs2any', 'zforce', 'groups', 'gunzip', 'tracepath', 'rdma_xclient', 'unalias', 'db_upgrade', 'dbus-uuidgen', 'uuidgen', 'uname', 'df', 'fc-match', 'evim', 'schemagen', 'sessreg', 'rdoc', 'gdbus-codegen', 'perl', 'perl5.16.3', 'egrep', 'mlxcables', 'recode-sr-latin', 'pkcheck', 'GET', 'rvim', 'addr2line', 'gsdj500', 'rpmbuild', 'amixer', 'unexpand', 'ypchsh', 'yppasswd', 'ypchfn', 'install', 'cancel.cups', 'msggrep', 'mwm', 'gcc-nm', 'remunge', 'ibgenperm', 'thumbpdf', 'nsenter', 'clean-binary-files', 'httpcfg', 'mlnx_dump_parser', 'ghci', 'autoexpect', 'ntpstat', 'texluac', 'dtestsrq', 'lz4cat', 'pkttyagent', 'python2', 'pkla-admin-identities', 'hpc', 'tail', 'size', 'fc-query', 'mkluatexfontdb', 'dbus-cleanup-sockets', 'nisdomainname', 'ldapurl', 'xsd', 'startx', 'crash', 'mcdiff', 'make', 'gslp', 'mktexfmt', 'pmafm', 'xdg-desktop-icon', 'ldappasswd', 'csh', 'printenv', 'vncconfig', 'wqdump_ext', 'gendiff', 'mst_cable', 'X', 'mstvpd', 'zmore', 'db_hotbackup', 'signver', 'systemctl', 'amsvis', 'tbl', 'xmessage', 'servertool', 'sn', 'embedspu', 'rview', 'nohup', 'grops', 'geoipupdate', 'xfd', 'rm', 'infotocap', 'pwscore', 'eu-objdump', 'mysql', 'mailq.postfix', 'ptx', 'systemd-loginctl', 'mstop', 'rxe_cfg', 'ar', 'ccrewrite', 'diff-jars', 'python', 'pmsocks', 'migspeed', 'xmbind', 'objcopy', 'alias', 'dos2unix', 'ca-legacy', 'tclsh', 'ofed_rpm_info', 'hwloc-assembler-remote', 'vimtutor', 'lprm', 'pygtk-demo', 'jjs', 'prtstat', 'seq', 'col', 'pdcp', 'eu-strip', 'ib_acme', 'resourcedump', 'dirname', 'fc-cache-64', 'lesskey', 'date', 'basename', 'grep', 'geoiplookup6', 'ssh-copy-id', 'xterm', 'svcutil', 'libpng-config', 'dvilualatex', 'db_load', 'systemd-notify', 'dracut', 'texconfig', 'haddock', 'xrandr', 'umount', 'xdg-mime', 'prlimit', 'ucx_info', 'infokey', 'pstree.x11', 'mono-test-install', 'write', 'geqn', 'xdg-screensaver', 'glib-mkenums', 'sudoedit', 'mst', 'ghc-pkg-7.6.3', 'wall', 'dgawk', 'ibv_polldcinfo', 'ppc64le-redhat-linux-gcc', 'gcc', 'xzcat', 'simpdftex', 'cvsbug', 'pdflatex', 'mlxburn', 'ping', 'column', 'fc-cache', 'pinentry-curses', 'pmlogextract', 'scp', 'stdbuf', 'mlxcables_ext', 'renice', 'file', 'raw_ethernet_bw', 'msguniq', 'appletviewer', 'pdf2dsc', 'mlxpci', 'dig', 'gem', 'coredumpctl', 'eu-size', 'conjure', 'mlnx_conf_mgr.sh', 'alsaunmute', 'command', 'cd', 'sha1sum', 'xsltproc', 'hp2ps', 'erb', 'update-desktop-database', 'gtk-update-icon-cache', 'crontab', 'icewm', 'mktexmf', 'whoami', 'ttmkfdir', 'uxterm', 'ucx_perftest', 'ibcongest', 'mlnx_perf', 'funzip', 'ghc', 'pkg-config', 'nvidia-persistenced', 'unzipsfx', 'bootctl', 'fc-conflist', 'pango-querymodules-64', 'splain', 'curl', 'arch', 'xinit', 'pfbtopfa', 'mozroots', 'setsid', 'setterm', 'gr2fonttest', 'wqdump', 'gzexe', 'gtk-launch', 'compare', 'aseqdump', 'cc', 'nvidia-debugdump', 'icesh', 'udevadm', 'lc', 'icehelp', 'gvimdiff', 'taskset', 'xml2-config', 'pkill', 'bzmore', 'mogrify', 'systemd-analyze', 'mkdir', 'lpq.cups', 'libpng15-config', 'mc', 'repstopdf', 'ld', 'ld.bfd', 'systemd-sysv-convert', 'nproc', 'dbpmda', 'cksum', 'psed', 's2p', 'msghack', 'tabs', 'systemd-coredumpctl', 'jmap', 'libtoolize', 'etags.emacs', 'gtester', 'pmie', 'fg', 'ps2pdfwr', 'peekfd', 'ib_atomic_bw', 'preconv', 'dtestx', 'aria_dump_log', 'gpg-error', 'pmtrace', 'allec', 'post-grohtml', 'tree', 'net-snmp-create-v3-user', 'bunzip2', 'zcat', 'xzless', 'lscpu', 'xzmore', 'udaddy', 'alsamixer', 'find2perl', 'dtestcm', 'iconv', 'rpm2cpio', 'desktop-file-edit', 'ps2pdf13', 'ldapexop', 'hwloc-assembler', 'rpmquery', 'ibv_umr', 'chown', 'pdsh', 'gcc-ar', 'pdb2mdb', 'unshare', 'db_replicate', 'nsupdate', 'cpio', 'xmvn-builddep', 'comm', 'dbus-monitor', 'automake-1.13', 'automake', 'eu-stack', 'runghc-7.6.3', 'xgettext', 'chsh', 'eqn', 'gdb', 'lualatex', 'cpupower', 'build-jar-repository', 'gacutil2', 'gawk', 'rftp', 'kpsewhere', 'c99', 'nvidia-smi', 'reset', 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'update_flash_nv', 'srp_daemon', 'bridge', 'saquery', 'ibswitches', 'addpart', 'smpquery', 'sss_cache', 'clockdiff', 'ntpdc', 'ypset', 'runlevel', 'sssd', 'build-locale-archive', 'ntpd', 'nfsidmap', 'ipmievd', 'atrun', 'postcat', 'odp_stat.sh', 'lvconvert', 'e2fsck', 'fsck.ext2', 'fsck.ext3', 'fsck.ext4', 'rtstat', 'ibprintrt.pl', 'ifconfig', 'era_dump', 'xfs_growfs', 'sminfo', 'lvmsadc', 'ibclearcounters', 'dmfilemapd', 'restorecon', 'thin_ls', 'ldattach', 'grpconv', 'vendor_post_uninstall.sh', 'ntpq', 'nvsetenv', 'era_check', 'connectx_port_config', 'postconf', 'delpart', 'try-from', 'vpdupdate', 'era_restore', 'avcstat', 'munged', 'snmpd', 'mountstats', 'mklost+found', 'lvmsar', 'ls-veth', 'snmptrapd', 'route', 'ibsrpdm', 'ibstat', 'phc2sys', 'lvresize', 'cracklib-packer', 'new-kernel-pkg', 'fsck.nfs', 'irqbalance', 'logrotate', 'xfs_rtcp', 'rpc.rquotad', 'ibcacheedit', 'genhomedircon', 'genl', 'exportfs', 'xfs_bmap', 'grpck', 'alsactl', 'cache_writeback', 'newusers', 'selabel_partial_match', 'makedumpfile', 'show_gids', 'mlnx_affinity', 'ofed_uninstall.sh', 'vgexport', 'lvmdump', 'nslcd', 'pvresize', 'partprobe', 'set_irq_affinity_bynode.sh', 'show_irq_affinity.sh', 'dump_fts', 'errinjct', 'hardlink', 'matchpathcon', 'fdformat', 'vgextend', 'fsfreeze', 'ofpathname', 'pwck', 'dhclient', 'postdrop', 'sendmail.postfix', 'vgcfgbackup', 'sulogin', 'hack-coff', 'lpc.cups', 'xfs_info', 'ypbind', 'nameif', 'nstat', 'mkfs.cramfs', 'sim_server', 'activate_firmware', 'nfsstat', 'opensm', 'gssproxy', 'ibaddr', 'mkfs.xfs', 'groupadd', 'halt', 'osmtest', 'lvmpolld', 'lsmcode', 'pvs', 'lvremove', 'start-statd', 'debugfs', 'setpci', 'selinuxexeccon', 'ibportstate', 'rtmon', 'ibcheckerrors', 'vgimportclone', 'e2label', 'tune2fs', 'rtas_dump', 'postfix', 'lnstat', 'dump_mfts.sh', 'thin_restore', 'check_lft_balance.pl', 'ibidsverify.pl', 'cma_roce_tos', 'selabel_lookup', 'ip6tables-save', 'rmmod', 'cache_metadata_size', 'nsm', 'run_srp_daemon', 'runuser', 'xfs_metadump', 'getcap', 'sefcontext_compile', 'ip', 'iptables', 'glibc_post_upgrade.ppc64le', 'fsadm', 'iblinkinfo.pl', 'ibqueryerrors.pl', 'setfiles', 'sys_ident', 'dhclient-script', 'tracepath6', 'findfs', 'getsebool', 'cbq', 'e2image', 'blkdiscard', 'uuserver', 'ifcfg', 'shutdown', 'smtp-source', 'install-info', 'set_nodedesc.sh', 'xfs_repair', 'rsyslogd', 'rpcdebug', 'lvm', 'mkhomedir_helper', 'pvscan', 'logsave', 'pwconv', 'unsquashfs', 'ntp-keygen', 'e2undo', 'blkmapd', 'vgscan', 'osd_login', 'umount.nfs', 'ibcheckerrs', 'rpc.nfsd', 'iblinkinfo', 'ibtracert', 'cfdisk', 'common_irq_affinity.sh', 'modinfo', 'sasldblistusers2', 'rtpr', 'selinuxconlist', 'wrapper', 'blkid', 'ibclearerrors', 'lvmconf', 'xqmstats', 'vgsplit', 'postsuper', 'thin_check', 'filefrag', 'adduser', 'redhat_lsb_trigger.ppc64le', 'dump_lfts.sh', 'drmgr', 'cache_check', 'crond', 'pvchange', 'vendstat', 'setenforce', 'addgnupghome', 'tcpdmatch', 'reboot', 'vipw', 'rpc.gssd', 'cracklib-format', 'perfquery', 'sln', 'pivot_root', 'create-cracklib-dict', 'quotaon', 'groupdel', 'ptp4l', 'mkfs', 'xfs_estimate', 'dmeventd', 'gss-server', 'usernetctl', 'show_counters', 'xfs_ncheck', 'vgchange', 'grpunconv', 'quotastats', 'iptunnel', 'dkms', 'resizepart', 'sysctl_perf_tuning', 'xfs_mkfile', 'repquota', 'ip6tables-restore', 'lusermod', 'wipefs', 'sshd', 'ifdown', 'cache_restore', 'arp', 'pvremove', 'clock', 'tickadj', 'ldconfig', 'selinuxdefcon', 'lvreduce', 'vigr', 'quot', 'vgdisplay', 'lchage', 'arping', 'ibacm', 'ibcheckportstate', 'smparquery', 'insmod', 'addnote', 'lvmetad', 'ibprintca.pl', 'switch_root', 'hwclock', 'kpartx', 'ifstat', 'sysinfo-snapshot.py', 'setsebool', 'edquota', 'killall5', 'pidof', 'anacron', 'service', 'sfdisk', 'vgimport', 'vgrename', 'sm-notify', 'lvmdiskscan', 'lvscan', 'selinuxenabled', 'nologin', 'atd', 'accessdb', 'ibcheckstate', 'userdel', 'lsvio', 'ibnodes', 'weak-modules', 'quotaoff', 'setquota', 'era_invalidate', 'automount', 'xfs_copy', 'sosreport', 'consoletype', 'phc_ctl', 'safe_finger', 'ppc64_cpu', 'mlnx_eswitch_set', 'uesensor', 'rpc.mountd', 'ls-vscsi', 'ibsysstat', 'modprobe', 'ibstatus', 'lgroupadd', 'vgs', 'rtacct', 'pdata_tools', 'telinit', 'setup_mr_cache.sh', 'poweroff', 'lsof', 'slattach', 'visudo', 'ibcheckportwidth', 'update-pciids', 'nscd', 'update_flash', 'smtp-sink', 'mkswap', 'sushell', 'lvmconfig', 'mktree', 'xfs_admin', 'ctstat', 'lvrename', 'ibmirror', 'pam_tally2', 'chkconfig', 'pam_console_apply', 'xfs_io', 'ib2ib_setup', 'nfsdcltrack', 'mksquashfs', 'umount.nfs4', 'arpd', 'rtas_ibm_get_vpd', 'setcap', 'rtas_dbg', 'chroot', 'ibqueryerrors', 'grubby', 'timemaster', 'ibchecknet', 'installkernel', 'vgmerge', 'rpc.idmapd', 'create-munge-key', 'routef', 'mount.nfs', 'pvmove', 'ip6tables', 'postmulti', 'ibnetdiscover', 'key.dns_resolver', 'request-key', 'alsabat-test.sh', 'genhostid', 'ibswportwatch.pl', 'postmap', 'init', 'ibprintswitch.pl', 'ether-wake', 'ifenslave', 'selinux_restorecon', 'fstrim', 'xfs_fsr', 'packer', 'lgroupdel', 'vgcreate', 'mount.nfs4', 'ethtool', 'fsck.cramfs', 'postalias', 'lvextend', 'vgconvert', 'saslpasswd2', 'netreport', 'mkfs.minix', 'cma_roce_mode', 'ibcheckwidth', 'thin_metadata_size', 'faillock', 'thin_rmap', 'ibcheckport', 'pvck', 'postkick', 'ibrouters', 'pvcreate', 'tcpd', 'vgck', 'rpcbind', 'ping6', 'opal-prd', 'thin_delta', 'mii-tool', 'showmount', 'ibccquery', 'devlink', 'set_irq_affinity.sh', 'ibping', 'nfsiostat', 'mlnx_tune', 'hvcsadmin', 'unix_chkpwd', 'getenforce', 'luseradd', 'set_poweron_time', 'semodule', 'convertquota', 'applygnupgdefaults', 'fuser', 'ibccconfig', 'compat_gid_gen'] ['darshan-mk-log-dirs.pl', 'darshan-gen-cc.pl', 'darshan-gen-cxx.pl', 'darshan-gen-fortran.pl', 'darshan-config'] ['htar', '5.0.2.9', '6.0.0.11', '5.0.2.11', 'hsi', '6.2.0.1', 'TA_Status', 'test_TA'] ['esub', 'esub.poe', 'pim', 'lsf_daemons', 'rla', 'elim.jsdl', 'named', 'esub.tv', 'esub.openmp', 'esub.mvapich', 'esub.dprov', 'sbatchd', 'esub.bproc', 'esub.openmpi', 'esub.oldtvpoe', 'esub.mpichp4', 'elim.frequency', 'esub.tvlammpi', 'esub.oldpoe', 'lim', 'esub.ls_dyna', 'esub.tvmpich_gm', 'esub.fluent', 'nios', 'esub.gold', 'esub.mpich_gm', 'esub.pvm', 'esub.intelmpi', 'esub.mpich_mx', 'eauth.krb5', 'res', 'tmp.elim.sa', 'eauth', 'esub.tvpoe', 'mesub', 'esub.mpich2', 'melim', 'esub.lammpi'] ['csm_bb_vg_create', 'csm_node_find_job', 'csm_cluster_query_state', 'csm_allocation_create', 'csm_ib_cable_update', 'csm_allocation_query_active_all', 'csm_bb_lv_delete', 'csm_allocation_update_state', 'csm_switch_attributes_update', 'csm_soft_failure_recovery', 'csm_diag_run_query', 'csm_allocation_step_begin', 'csm_bb_vg_delete', 'csm_node_attributes_query_history', 'csm_allocation_query_details', 'csm_node_attributes_query_details', 'csm_diag_run_query_details', 'csm_ras_event_create', 'csm_diag_run_begin', 'csm_node_resources_query_all', 'csm_allocation_query', 'csm_ras_event_query_allocation', 'csm_switch_attributes_query', 'csm_node_attributes_query', 'csm_switch_attributes_query_details', 'csm_infrastructure_health_check', 'csm_node_attributes_update', 'csm_ras_msg_type_create', 'csm_ras_msg_type_delete', 'csm_ras_msg_type_query', 'csm_node_query_state_history', 'csm_switch_attributes_query_history', 'csm_allocation_step_query_active_all', 'csm_bb_lv_create', 'csm_node_resources_query', 'csm_allocation_delete', 'csm_ras_event_query', 'csm_allocation_resources_query', 'csm_diag_result_create', 'csm_node_delete', 'csm_ras_msg_type_update', 'csm_bb_vg_query', 'csm_ib_cable_query_history', 'csm_diag_run_end', 'csm_allocation_step_query', 'csm_allocation_step_query_details', 'csm_allocation_update_history', 'csm_allocation_step_end', 'csm_ib_cable_query', 'csm_jsrun_cmd', 'csm_bb_lv_query'] [] [] ['decoder'] ['ibmsquit', 'ibis', 'dump2slvl.pl', 'ibdiagpath', 'IBMgtSim', 'dump2psl.pl', 'ibdmchk', 'mkSimNodeDir', 'ibdiagui', 'ibdiagnet', 'RunSimTest', 'ibdmtr', 'ibtopodiff', 'ibdmsh', 'ibnlparse', 'ibmssh'] ['jsrun', 'jswait', 'jskill', 'query_env', 'export_slurm_env', 'jsm_simulator', 'js_task_info', 'admin', 'jsproxy', 'jslist', 'export_smpi_env', 'jsm', 'stock'] ['hiera', 'facter', 'puppet', 'facter-ng.bat'] ['mmtrace', 'mmsysmon.py', 'mmnfsfuncs', 'mmcesnfsmonitor', 'mmjob', 'mmdelcallback', 'tsdf', 'tschfileset', 'tslsdisk', 'tslspolicy', 'tslsfs', 'tsdelsnapshot', 'tslsfileset', 'tsnsdaccess', 'tscrsnapshot', 'tslspool', 'tssnapdir', 'tsedquota', 'tsusercmd', 'tslssnapshot', 'tsstatus', 'mmcrnsd', 'tsgetscsiinfo', 'mmqosnice', 'mmsetquota', 'mmdelfileset', 'tsprpreemptabort', 'cleanupkeystonedb', 'mmsdrfsdef.Linux', 'mmcesuserauthcrservice', 'mmdumpfilocks', 'tschdisk', 'tsaddpdisk', 'tsctl', 'tskafkaauth', 'tsdbfs', 'tscheckquota', 'tsfsctl', 'tsrpldisk', 'tschpdisk', 'tsrecgroupserver', 'tscmd', 'tsreclaimspace', 'tscrrecgroup', 'tschstoragepool', 'tsrestripefs', 'tsdefragfs', 'tsfileid', 'tsdsh', 'tsdeldisk', 'tsquotaon', 'tschfs', 'tsdefedquota', 'tsunmount', 'tsdelpdisk', 'tsressnapshot', 'tscrvdisk', 'tsquotaoff', 'tsexpelnode', 'tslsvdisk', 'tscrfs', 'tschmgr', 'tslsrecgroup', 'tslsrecoverygroupevents', 'tsdelvdisk', 'tsnsddiscover', 'tsdefquotaoff', 'tscrfileset', 'tsdelfs', 'tsdbvdisk', 'tsdelfileset', 'tsadddisk', 'tscachectl', 'tsdefquotaon', 'tschcarrier', 'tsauth', 'tslsqos', 'tslspdisk', 'tsnsdrediscover', 'tsremount', 'tsdelrecgroup', 'tschpool', 'tsrepquota', 'tschqos', 'tschrecgroup', 'tsfsck', 'tsdiag', 'tssbrff', 'mmlsfileset', 'mmexectsmcmd', 'mmgetkafkaspecinfo', 'mmfs', 'mmchconfig', 'ces.snap.py', 'mmperfmon', 'tsgetacl', 'clstrwatchcallbacks', 'mmcessmblsconfig', 'tslsattr', 'mmcesmonitord', '.links', 'mmnfsgrace', 'mmhelp-apolicy', 'mmpmon', 'mmcesnfsdelexport', 'mmchpolicy', 'gui.snap.py', 'tspcache', 'perfmon.snap.py', 'mmsdrquerydef', 'mmlsqos', 'mmxargs', 'tschattr', 'mmclidecode', 'clstrwatchconsumermanager', 'mmfsctl', 'mmpsnap', 'mmccrnv', 'perf.snap.py', 'mmcespnfsip', 'mmnfsnodeback', 'tsimgrestore', 'mmcesuserauthckservice', 'mmchnodeclass', 'pymmcesnfslsexport.py', 'mmdelacl', 'mmumount', 'mmcrnodeclass', 'mmsysmonc', 'tspcacheevict', 'mmexecvfile', 'sshwrap', 'mmgetifconf', 'mmfs-ppc64-rh4', 'sysmon.snap.py', 'mmimgrestore', 'mmcesobjaccesslinkfset', 'mmchecksubsys', 'mmcesop', 'tspmon', 'mmdefedquota', 'mmdelsnapshot', 'mmreclaimspace', 'mmsysmoncontrol', 'tsspectrumdiscover', 'mmyfields', 'mmchnode', 'mmrestorefs', 'mmcallhome', 'mmexportfs', 'mmcesnfsloadexport', 'tslspool34', 'mmnfsmonitor', 'mmsnmpagentd30', 'tsfindinode', 'mmfsfuncs.Linux', 'mmdumpperfdata', 'mmcesobjcrbase', 'mmdsh', 'objmetric_count.py', 'mmauditmount', 'mmcessmblsexport', 'mmdevdiscover', 'mmlsnode', 'mmautoload', 'mmcesnfscrexport', 'mmchnsd', 'mmfileid', 'mmcesnfsfuncs', 'mmcesrecovernode', 'mmlsfs', 'mmcollectdebugdata', 'tseditacl', 'tsbuhelper', 'tslinkfileset', 'tspreparedisk', 'mmrpldisk', 'mmdelnode', 'mmceslog', 'mmcrfsc', 'mmcesblockfuncs', 'mmgensymtable', 'mmfsd', 'mmnfsinstall', 'mmdspmsg', 'mmclone', 'mmchfs', 'mmlsdisk', 'mmnfstakeover', 'tsyselect', 'mmnfsup', 'mmcessmbcrexport', 'tsaddrmap', 'mmnetverify', 'mmchpool', 'msgqueue.snap.py', 'mmcesobjlscfg', 'tsrestorefileset', 'mmbuildgpl', 'mmsmbman', 'tsfindname', 'mmcesloadmonitor', 'mmcesobjaccess', 'mmaddcallback', 'mmcesobjpolicyfuncs', 'mmcessmbdelexport', 'msgqueueDaemonManager', 'core.snap.py', 'tsgskkm', 'mmauth', 'mmedquota', 'mmshutdown', 'tsdbmemleakparse', 'mmadquery', 'mmsdrcli', 'mmccr', 'mmcesobjchstoragepolicy', 'mmcesnfschcfg', 'tswatchmonitor', 'mmmigratefs', 'mmputacl', 'mmlscluster', 'commonsnap.py', 'mmcesservice', 'mmadddisk', 'tslsmgr', 'tssbrindex', 'mmafmlocal', 'mmlsperfdata', 'mmnfsuninstall', 'mmcmi', 'mmcesobjs3', 'tspcachescan', 'kdump-4.14.0-115.14.1.el7a.ppc64le', 'mmlsnsd', 'mmchcluster', 'mmunmount', 'mmnfsquorumloss', 'mmcesnetdeladdress', 'mmlsquota', 'mmces', 'pymmcesnfsfuncs.py', 'tsputacl', 'mmchqos', 'tsprshowfence', 'gpfsrunlevel', 'mmimgbackup', 'mmsdrrestore', 'tsqosnice', 'mmsdrserv', 'mmmsgqueue', 'mmcesmmcdelexport', 'mmlinkfileset', 'mmrestoreconfig', 'mmdelnodeclass', 'mmsmbfuncs', 'mmcesobjcfgman', 'mmfixcfg', 'mmcesnfslsexport', 'tsdbmemleak', 'mmaudit', 'mmcesnfslscfg', 'mmsmbsupportedoptions', 'mmafmconfig', 'mmlscallback', 'mmlsmgr', 'tsbackup', 'mmcesminfuncs', 'mmfsmount', 'mmcesmmcchexport', 'tsrestripefile', 'kdump', 'mmimportfs', 'mmcesobjcrring', 'mmnfs', 'mmcommon', 'mmcesnetmvaddress', 'mmsnmpagentd', 'mmcesobjfuncs', 'gui.callhome.py', 'tsbackup33', 'lxtrace', 'mmsdrfsdef', 'mmsmb', 'mmobj', 'tsprclear', 'mmceshdfsfuncs', 'mmcesnetworkmonitor', 'tspcacheutil', 'mmqos', 'mmlspolicy', 'mmrestripefs', 'mmcessmbfuncs', 'mmaddnode', 'mmblock', 'mmcrfs', 'mmmount', 'tsprreadres', 'mmnsddiscover', 'mmprotocoltrace', 'mmglobfuncs', 'tsprreadkeys', 'mmnfsdown', 'gpfs.snap', 'object.snap.py', 'mmcesnetaddaddress', 'mmcesobjchcfg', 'mmrsh', 'mmcesobjmr', 'mmeditacl', 'auditConsumerManager', 'mmlsconfig', 'mmsync', 'mmgetacl', 'mmcesuserauthrmservice', 'mmhealth', 'tsdelacl', 'mmremote', 'mmpercentencode', 'mmcloudfuncs', 'daemonize', 'mmcesnfschexport', 'tsclone', 'callhome.snap.py', 'clstrwatchreplaymanager', 'tsnetverify', 'mmstartup', 'mmcachectl', 'mmgskkm', 'mmdefragfs', 'mmsnapdir', 'tsapolicy', 'mmrcmd', 'mmexpelnode', 'mmsdrquery', 'ece.callhome.py', 'mmchdisk', 'mmcesnetdown', 'mmlslicense', 'mmrestripefile', 'mmcrfileset', 'mmnfscleanup', 'mmlogmsg', 'mmcessmbexportacl', 'mmchlicense', 'mmsetrcmd', 'tsclwatchrules', 'mmdynamicmap', 'tssetquota', 'tsprreserve', 'wftopics', 'mmvaryonvg', 'mmsnmpagentd10', 'mmbackupconfig', 'mmdefquotaon', 'mmlsattr', 'mmcesfuncs', 'mmfsadm', 'mmcesmmccrexport', 'runmmfs', 'mmafmcmd', 'ccrrestore', 'mmunlinkfileset', 'basicsnap.py', 'mmafmhomeconfig', 'auth.snap.py', 'fab3.snap.py', 'mmuserauth', 'object.callhome.py', 'mmlogsort', 'mmdf', 'mmcesobjcrstoragepolicy', 'mmdefquotaoff', 'mmtracectl', 'mmdump', 'tsprquery', 'mmfsenv', 'mmfsfuncs', 'mmrepquota', 'mmcesdr', 'mmcesnode', 'tslsquota', 'mmdsm', 'mmdelnsd', 'mmnfsinit', 'mmcrsnapshot', 'mmlockf', 'mmcesauthfuncs', 'network.callhome.py', 'mmglobfuncs.Linux', 'tsprinquiry', 'nfs.snap.py', 'mmcesnetlsaddress', 'mmapplypolicy', 'mmdumpkthreads', 'tswatchgpfsconduit', 'mmcessmbchconfig', 'perfmon.callhome.py', 'mmauditpreunmount', 'mmrcp', 'scpwrap', 'mmremotefs', 'tsunlinkfileset', 'mmcrcluster', 'mmnfspreunmount', 'mmcessmbchexport', 'tsauditconsumer', 'mmchattr', 'mmdeldisk', 'mmfsck', 'smb.snap.py', 'mmcesobjdepstoragepolicy', 'mmcheckquota', 'mmprodname', 'mmdelfs', 'mmcallhremote', 'mmgetstate', 'mmcesuserauthlsservice', 'mmcesnetup', 'mmremotecluster', 'tsstarthelper', 'mmcloudgateway', 'mmgetconfdata', 'tschpolicy', 'mmchmgr', 'mmcesnetchaddress', 'mmsmbvalidoptions', 'mmchfileset', 'mmwatch', 'tsprregister', 'mmstartpolicy', 'hadoop.snap.py', 'mmquotaoff', 'mmcesmonitor', 'mmquotaon', 'msgqueueservicesmonitormanager', 'mmlspool', 'mmlsmount', 'mmccrmonitor', 'mmbackup', 'mmlsnodeclass', 'lxtrace-4.14.0-115.14.1.el7a.ppc64le', 'mmrefresh', 'mmnfsrecovernode', 'mmpercentdecode', 'wftopichk', 'tspcachesnapdiff', 'mmdiag', 'mmlssnapshot', 'mmcesobjlsstoragepolicy', 'mmafmctl', 'mmstatdcallout', 'mmksh', 'sshscpwrap'] Path provided by --with-executables-search-path ['win32fe.exe', 'win32feutils.dll'] Checking for program /sw/sources/lsf-tools/2.0/summit/bin/doctext...not found Checking for program /sw/summit/xalt/1.2.0/bin/doctext...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/bin/doctext...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/cmake-3.15.2-xit2o3iepxvqbyku77lwcugufilztu7t/bin/doctext...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/bin/doctext...not found Checking for program /sw/summit/forge/20.0.1/bin/doctext...not found Checking for program /sw/summit/cuda/10.1.243/bin/doctext...not found Checking for program /opt/ibm/spectrumcomputing/lsf/10.1.0.9/linux3.10-glibc2.17-ppc64le-csm/bin/doctext...not found Checking for program /usr/bin/doctext...not found Checking for program /usr/sbin/doctext...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/darshan-runtime-3.1.7-cnvxicgf5j4ap64qi6v5gxp67hmrjz43/bin/doctext...not found Checking for program /sw/sources/hpss/bin/doctext...not found Checking for program /opt/ibm/spectrumcomputing/lsf/10.1.0.9/linux3.10-glibc2.17-ppc64le-csm/etc/doctext...not found Checking for program /opt/ibm/csm/bin/doctext...not found Checking for program /usr/local/bin/doctext...not found Checking for program /usr/local/sbin/doctext...not found Checking for program /opt/ibm/flightlog/bin/doctext...not found Checking for program /opt/ibutils/bin/doctext...not found Checking for program /opt/ibm/spectrum_mpi/jsm_pmix/bin/doctext...not found Checking for program /opt/puppetlabs/bin/doctext...not found Checking for program /usr/lpp/mmfs/bin/doctext...not found Checking for program /ccs/home/adams/petsc_install/lib/petsc/bin/win32fe/doctext...not found Unable to find programs ['doctext'] providing listing of each search directory to help debug Path provided in Python program Path provided by default path ['bsub', 'bjob', 'showusage'] ['mpirun', 'ibrun', 'ibrun.symm', 'aprun', 'jsrun', 'ld', 'xalt_helper_functions.sh'] ['shmemrun', 'profile2mat.pl', 'oshrun', 'oshmem_info', 'orterun', 'orted', 'orte-server', 'orte-info', 'orte-clean', 'ompi_info', 'ompi-server', 'ompi-clean', 'mpitool', 'mpirun', 'mpijob', 'mpiexec', 'jumpshot', 'get_nl_setting', 'efix', 'alias.pl', 'aggregate_profile.pl', 'stock', 'shmemfort', 'shmemcxx', 'shmemcc', 'shmemc++', 'shmemCC', 'oshfort', 'oshcxx', 'oshcc', 'oshc++', 'oshCC', 'ortecc', 'opal_wrapper', 'mpixlf', 'mpixlc', 'mpixlC', 'mpipgifort', 'mpipgicc', 'mpipgic++', 'mpifort', 'mpif90', 'mpif77', 'mpicxx', 'mpicc', 'mpic++', 'mpiCC', 'mpip-jsrun'] ['ccmake', 'cmake', 'ctest', 'cpack'] ['localrc', 'pgaccelerror', 'pgimport', 'pgacclnk', 'pgaccelinfo', 'pgnvd', 'pgexplain.xml', 'pgunzip', 'pgzip', 'pgsize', 'pgipa', 'pgicg', 'pgextract', 'pgappend', 'pgprepro', 'pgcpuid', 'pgprofrc', 'pgprof', 'pgf901-llvm_ex', 'pgf901-llvm', 'pgf90-llvm_ex', 'pgf902-llvm', 'pggpp2ex-llvm', 'pggpp2-llvm', 'pggpp1-llvm', 'pggdecode', 'pgc-llvm_ex', 'pgc-llvm', 'pgfortran', 'pgf90', 'pgc++', 'pgcc18', 'pgcc11', 'pgcc', 'pgnvvm', 'makelocalrc', 'pgnvdlinpowerrc', 'pgnvd64rc', 'pgnvdrc', '.pgnvdrc', 'acclinuxpower64rc', 'acc1rc', 'versionrc', 'powerversionrc', 'c++llvmrc', 'pgllvmrc', 'llvmrc', 'linpoweriparc', 'noiparc', 'iparc', 'pgftnrc', 'pgf90linpowerrc', 'pgc++linpowerrc', 'pgcclinpowerrc', 'linpowerrc', 'powerrc', 'cpprc', 'ccrc', 'fnativerc', 'nativerc', '.pgfortranrc', '.pgf90rc', '.pgc++rc', '.pgcc18rc', '.pgcc11rc', '.pgccrc', 'siterc'] ['ddt-debugger-mps', 'ddt', 'ddt-debugger', 'allinea-client', 'ddt-mpirun', 'forge-probe', 'forge', 'make-profiler-libraries', 'ddt-debugger-ll', 'map', 'ddt-client'] ['cuobjdump', 'cuda-gdb', 'cuda-gdbserver', 'gpu-library-advisor', 'cuda-memcheck', 'nsight', 'nsight_ee_plugins_manage.sh', 'nv-nsight-cu-cli', 'bin2c', 'crt', 'cudafe++', 'fatbinary', 'nvcc', 'nvcc.profile', 'nvlink', 'ptxas', 'nvdisasm', 'nvprof', 'nvprune', 'computeprof', 'nvvp', 'cuda-install-samples-10.1.sh'] ['brsvjob', 'lspasswd', 'bmgroup', 'bpost', 'btop', 'bclusters', 'lsplace', 'bjdepinfo', 'lsreghost', 'brsvs', 'bparams', 'bgadd', 'lsrun', 'lsload', 'breconfig', 'lsfrestart', 'bconf', 'bmod', 'bsub', 'lsunlockhost', 'bmodify', 'bread', 'bacct', 'lsfrsv', 'lsgrun', 'bslots', 'bapp', 'bjobs', 'lsmail', 'lsfstartup', 'lsmake4', 'lslockhost', 'lsfshutdown', 'bpeek', 'lsrun.sh', 'lslogin', 'bimages', 'bchkpnt', 'bwait', 'lsfhadoop.sh', 'bsla', 'brsvmod', 'lsrtasks', 'blimits', 'busers', 'bresources', 'bqueues', 'brequeue', 'bmg', 'lsrcp', 'lseligible', 'lshosts', 'lsloadadj', 'breboot', 'lsacct', 'lsclusters', 'bugroup', 'lsltasks', 'lsadmin', 'bstatus', 'bgbroker', 'bgdel', 'bentags', 'lsportcheck', 'brsvsub', 'lsf-start-spark.sh', 'bqc', 'bhpart', 'lsf-spark-shell.sh', 'lsmakerm', 'lsf-spark-submit.sh', 'brestart', 'bswitch', 'bjgroup', 'lsreconfig', 'lammpirun_wrapper', 'lsf-stop-spark.sh', 'badmin', 'bbot', 'bstop', 'lsinfo', 'brun', 'bhist', 'bhosts', 'bgmod', 'brsvadd', 'bkill', 'brlainfo', 'brsvdel', 'xagent', 'bresize', 'bmig', 'lsmon', 'lsid', 'bgpinfo', 'lsmake', 'bresume', 'blaunch', 'lsacctmrg'] ['sview', 'strigger', 'sstat', 'sshare', 'srun', 'sreport', 'squeue', 'sprio', 'smap', 'sinfo', 'sgather', 'sdiag', 'scontrol', 'scancel', 'sbcast', 'sbatch', 'sattach', 'salloc', 'sacctmgr', 'sacct', 'qsub', 'tracejob', 'qterm', 'qstop', 'qstat', 'qstart', 'qsig', 'qselect', 'qrun', 'qrls', 'qrerun', 'qorder', 'qnodes', 'qmsg', 'qmove', 'qmgr', 'qhold', 'qgpureset', 'qgpumode', 'qenable', 'qdisable', 'qdel', 'qchkpt', 'qalter', 'printtracking', 'printserverdb', 'printjob', 'pbsnodes', 'pbsdsh', 'pbs_track', 'nqs2pbs', 'hostn', 'chk_tree', 'jobsub', 'jobstat', 'ctags', 'diffstat', 'rpmsign', 'swig', 'ccache-swig', 'ocs', 'cscope-indexer', 'cscope', 'doxygen', 'unwrapdiff', 'splitdiff', 'rediff', 'recountdiff', 'lsdiff', 'interdiff', 'grepdiff', 'flipdiff', 'fixcvsdiff', 'filterdiff', 'espdiff', 'editdiff', 'dehtmldiff', 'combinediff', 'yacc', 'byacc', 'indent', 'rlog', 'rcsmerge', 'rcsfreeze', 'rcsdiff', 'rcsclean', 'rcs', 'merge', 'ident', 'co', 'ci', 'svnversion', 'svnsync', 'svnserve', 'svnrdump', 'svnlook', 'svndumpfilter', 'svnadmin', 'svn', 'intltoolize', 'intltool-update', 'intltool-prepare', 'intltool-merge', 'intltool-extract', 'gettextize', 'autopoint', 'stap-report', 'stapsh', 'staprun', 'stap-merge', 'stap-prep', 'stap', 'screen', 'rhn_register', 'whiptail', 'subscription-manager', 'rhsmcertd', 'rhsm-debug', 'rct', 'consolehelper', 'pyinotify', 'easy_install-2.7', 'easy_install', 'snmpwalk', 'snmpvacm', 'snmpusm', 'snmptrap', 'snmptranslate', 'snmptls', 'snmptest', 'snmptable', 'snmpstatus', 'snmpset', 'snmpnetstat', 'snmpinform', 'snmpgetnext', 'snmpget', 'snmpdf', 'snmpdelta', 'snmpbulkwalk', 'snmpbulkget', 'encode_keychange', 'chardetect', 'atopsar', 'atopd', 'atopconvert', 'atop', 'abrt-dump-oops', 'abrt-action-save-kernel-data', 'abrt-action-analyze-oops', 'abrt-action-trim-files', 'abrt-action-perform-ccpp-analysis', 'abrt-action-list-dsos', 'abrt-action-install-debuginfo', 'abrt-action-generate-core-backtrace', 'abrt-action-generate-backtrace', 'abrt-action-analyze-vulnerability', 'abrt-action-analyze-core', 'abrt-action-analyze-ccpp-local', 'abrt-action-analyze-c', 'abrt-action-analyze-backtrace', 'abrt-watch-log', 'abrt-handle-upload', 'abrt-action-save-package-data', 'abrt-action-notify', 'abrt-action-analyze-xorg', 'reporter-ureport', 'reporter-rhtsupport', 'libtar', 'satyr', 'orig', 'git', 'git-receive-pack', 'git-upload-archive', 'git-upload-pack', 'git-shell', 'lex', 'tset', 'pk12util', 'as', 'lpr.cups', 'speaker-test', 'manpath', 'hwloc-gather-topology', 'hwloc-calc', 'rev', 'snmpconf', 'sctp_darn', 'trust', 'nm', 'fc-pattern', 'ucs2any', 'zforce', 'groups', 'gunzip', 'tracepath', 'rdma_xclient', 'unalias', 'db_upgrade', 'dbus-uuidgen', 'uuidgen', 'uname', 'df', 'fc-match', 'evim', 'schemagen', 'sessreg', 'rdoc', 'gdbus-codegen', 'perl', 'perl5.16.3', 'egrep', 'mlxcables', 'recode-sr-latin', 'pkcheck', 'GET', 'rvim', 'addr2line', 'gsdj500', 'rpmbuild', 'amixer', 'unexpand', 'ypchsh', 'yppasswd', 'ypchfn', 'install', 'cancel.cups', 'msggrep', 'mwm', 'gcc-nm', 'remunge', 'ibgenperm', 'thumbpdf', 'nsenter', 'clean-binary-files', 'httpcfg', 'mlnx_dump_parser', 'ghci', 'autoexpect', 'ntpstat', 'texluac', 'dtestsrq', 'lz4cat', 'pkttyagent', 'python2', 'pkla-admin-identities', 'hpc', 'tail', 'size', 'fc-query', 'mkluatexfontdb', 'dbus-cleanup-sockets', 'nisdomainname', 'ldapurl', 'xsd', 'startx', 'crash', 'mcdiff', 'make', 'gslp', 'mktexfmt', 'pmafm', 'xdg-desktop-icon', 'ldappasswd', 'csh', 'printenv', 'vncconfig', 'wqdump_ext', 'gendiff', 'mst_cable', 'X', 'mstvpd', 'zmore', 'db_hotbackup', 'signver', 'systemctl', 'amsvis', 'tbl', 'xmessage', 'servertool', 'sn', 'embedspu', 'rview', 'nohup', 'grops', 'geoipupdate', 'xfd', 'rm', 'infotocap', 'pwscore', 'eu-objdump', 'mysql', 'mailq.postfix', 'ptx', 'systemd-loginctl', 'mstop', 'rxe_cfg', 'ar', 'ccrewrite', 'diff-jars', 'python', 'pmsocks', 'migspeed', 'xmbind', 'objcopy', 'alias', 'dos2unix', 'ca-legacy', 'tclsh', 'ofed_rpm_info', 'hwloc-assembler-remote', 'vimtutor', 'lprm', 'pygtk-demo', 'jjs', 'prtstat', 'seq', 'col', 'pdcp', 'eu-strip', 'ib_acme', 'resourcedump', 'dirname', 'fc-cache-64', 'lesskey', 'date', 'basename', 'grep', 'geoiplookup6', 'ssh-copy-id', 'xterm', 'svcutil', 'libpng-config', 'dvilualatex', 'db_load', 'systemd-notify', 'dracut', 'texconfig', 'haddock', 'xrandr', 'umount', 'xdg-mime', 'prlimit', 'ucx_info', 'infokey', 'pstree.x11', 'mono-test-install', 'write', 'geqn', 'xdg-screensaver', 'glib-mkenums', 'sudoedit', 'mst', 'ghc-pkg-7.6.3', 'wall', 'dgawk', 'ibv_polldcinfo', 'ppc64le-redhat-linux-gcc', 'gcc', 'xzcat', 'simpdftex', 'cvsbug', 'pdflatex', 'mlxburn', 'ping', 'column', 'fc-cache', 'pinentry-curses', 'pmlogextract', 'scp', 'stdbuf', 'mlxcables_ext', 'renice', 'file', 'raw_ethernet_bw', 'msguniq', 'appletviewer', 'pdf2dsc', 'mlxpci', 'dig', 'gem', 'coredumpctl', 'eu-size', 'conjure', 'mlnx_conf_mgr.sh', 'alsaunmute', 'command', 'cd', 'sha1sum', 'xsltproc', 'hp2ps', 'erb', 'update-desktop-database', 'gtk-update-icon-cache', 'crontab', 'icewm', 'mktexmf', 'whoami', 'ttmkfdir', 'uxterm', 'ucx_perftest', 'ibcongest', 'mlnx_perf', 'funzip', 'ghc', 'pkg-config', 'nvidia-persistenced', 'unzipsfx', 'bootctl', 'fc-conflist', 'pango-querymodules-64', 'splain', 'curl', 'arch', 'xinit', 'pfbtopfa', 'mozroots', 'setsid', 'setterm', 'gr2fonttest', 'wqdump', 'gzexe', 'gtk-launch', 'compare', 'aseqdump', 'cc', 'nvidia-debugdump', 'icesh', 'udevadm', 'lc', 'icehelp', 'gvimdiff', 'taskset', 'xml2-config', 'pkill', 'bzmore', 'mogrify', 'systemd-analyze', 'mkdir', 'lpq.cups', 'libpng15-config', 'mc', 'repstopdf', 'ld', 'ld.bfd', 'systemd-sysv-convert', 'nproc', 'dbpmda', 'cksum', 'psed', 's2p', 'msghack', 'tabs', 'systemd-coredumpctl', 'jmap', 'libtoolize', 'etags.emacs', 'gtester', 'pmie', 'fg', 'ps2pdfwr', 'peekfd', 'ib_atomic_bw', 'preconv', 'dtestx', 'aria_dump_log', 'gpg-error', 'pmtrace', 'allec', 'post-grohtml', 'tree', 'net-snmp-create-v3-user', 'bunzip2', 'zcat', 'xzless', 'lscpu', 'xzmore', 'udaddy', 'alsamixer', 'find2perl', 'dtestcm', 'iconv', 'rpm2cpio', 'desktop-file-edit', 'ps2pdf13', 'ldapexop', 'hwloc-assembler', 'rpmquery', 'ibv_umr', 'chown', 'pdsh', 'gcc-ar', 'pdb2mdb', 'unshare', 'db_replicate', 'nsupdate', 'cpio', 'xmvn-builddep', 'comm', 'dbus-monitor', 'automake-1.13', 'automake', 'eu-stack', 'runghc-7.6.3', 'xgettext', 'chsh', 'eqn', 'gdb', 'lualatex', 'cpupower', 'build-jar-repository', 'gacutil2', 'gawk', 'rftp', 'kpsewhere', 'c99', 'nvidia-smi', 'reset', 'xdg-open', 'zip', 'split', 'mlx_fpga_ext', 'catchsegv', 'ghc-7.6.3', 'keytool', 'aria_chk', 'mlxreg', 'mstregdump', 'alsaucm', 'mlxlink', 'rename', 'chktrust', 'true', 'db_recover', 'mktexlsr', 'xpr', 'skill', 'otflist', 'gfortran', 'gtroff', 'uil', 'jvmjar', 'zgrep', 'elfedit', 'xclipboard', 'passwd', 'prove', 'eu-nm', 'openssl', 'su', 'kibitz', 'kpsestat', 'pgrep', 'printf', 'gtbl', 'ib_read_lat', 'zipdetails', 'gtar', 'jarsigner', 'mysql_find_rows', 'fold', 'gconf-merge-tree', 'munge', 'ln', 'tty', 'uuclient', 'stat', 'chfn', 'find-jar', 'wish', 'pmdiff', 'mkocp', 'lchsh', 'jconsole', 'luit', 'diff', 'rpmdb', 'gcore', 'rsync', 'fc-list', 'dmesg', 'libtool', 'mkfontscale', 'zsoelim', 'mstmcra', 'pod2usage', 'xjc', 'uptime', 'dump2slvl.pl', 'ldapwhoami', 'testrb', 'alsatplg', 'setarch', 'dbus-test-tool', 'msgfmt', 'alsa-delay', 'gview', 'texconfig-dialog', 'ps2pdf14', 'cairo-sphinx', 'sctp_test', 'ps2epsi', 'pmlogconf', 'dwz', 'amidi', 'updmap-sys', 'compile_et', 'man', 'cmp', 'hostnamectl', 'dd', 'tmon', 'vdir', 'pldd', 'sctp_status', 'iceauth', 'getfacl', 'xrdb', 'runhaskell-ghc', 'udpong', 'hwloc-distances', 'sh', 'db_stat', 'ib_write_bw', 'fmt', 'fc-validate', 'mcs', 'ibv_cc_pingpong', 'base64', 'ibv_devinfo', 'ibv_xsrq_pingpong', 'mlxreg_ext', 'sqlite3', 'ps2ps2', 'dapltest', 'tar', 'head', 'ps2pdf', 'ri', 'serialver', 'script', 'pstree', 'msgcomm', 'finger', 'fallocate', 'xzdec', 'whatis', 'gencat', 'perlthanks', 'perlbug', 'xconsole', 'xclock', 'wsdl', 'mlxtrace', 'aclocal', 'aclocal-1.13', 'red', 'readlink', 'unix2mac', 'vim', 'zegrep', 'certutil', 'hwloc-info', 'xinput', 'hwloc-distrib', 'gzip', 'ypcat', 'localedef', 'emacs', 'pmlogsummary', 'mlnx_interface_mgr.sh', 'mysql_config', 'gpgsplit', 'zipinfo', 'unzip', 'updatedb', 'idn', 'systemd-run', 'pwd', 'mailx', 'xzdiff', 'db_dump185', 'wish8.5', 'ibv_devices', 'ls', 'mcedit', 'iptables-xml', 'db_dump', 'unlz4', 'xdg-icon-resource', 'arecord', 'kernel-install', 'otftobdf', 'sqlmetal', 'mysqlslap', 'lp', 'dbus-run-session', 'xcursorgen', 'mremote', 'gsbj', 'ldapadd', 'unpigz', 'pigz', 'ed', 'gss-client', 'ibdiagm.sh', 'm4', 'systemd-path', 'kpsetool', 'cal', 'raw_ethernet_burst_lat', 'mpi-selector', 'lprsetup.sh', 'rvi', 'mono', 'xrefresh', 'zipsplit', 'lp.cups', 'batch', 'mysqladmin', 'ib_write_lat', 'ldapcompare', 'lprm.cups', 'which', 'msginit', 'oldfind', 'toe', 'unlink', 'lz4c', 'ppc64le-redhat-linux-g++', 'c++', 'g++', 'ppc64le-redhat-linux-c++', 'montage', 'ghostscript', 'diff3', 'run-singularity', 'dcgmi', 'ibdiagpath', 'pmfind', 'free', 'ghc-doc-index', 'gpg-zip', 'tcsh', 'mconfig', 'gpgv2', 'jdb', 'pmpython', 'allneeded', 'icewmhint', 'pinky', 'rmid', 'ebrowse', 'lsblk', 'xmlwf', 'memhog', 'ruby', 'eu-findtextrel', 'dislocate', 'vncviewer', 'less', 'ibdev2netdev', 'lsmem', 'systemd-ask-password', 'kpsereadlink', 'lstopo-no-graphics', 'bzcat', 'python2-config', 'cat', 'ngettext', 'gtk-query-immodules-3.0-64', 'apropos', 'dimax_init', 'icewmtray', 'linux64', 'mstcongestion', 'gdb-add-index', 'who', 'dviluatex', 'xwud', 'pstack', 'ldapmodrdn', 'bzgrep', 'ucx_read_profile', 'ionice', 'bison', 'rmic', 'mktexpk', 'ppc32', 'ranlib', 'jhat', 'slabtop', 'x11perf', 'systemd-cgtop', 'wait', 'catman', 'xauth', 'systemd-cat', 'cancel', 'bg', 'env', 'xkill', 'pmlc', 'numactl', 'tnameserv', 'pmdbg', 'at', 'convert', 'Xvnc', 'flint_ext', 'strings', 'soapsuds', 'gstack', 'msgcmp', 'mkofm', 'ssh-keygen', 'sdiff', 'HEAD', 'ib_send_lat', 'mkfontdir', 'pgawk', 'mysqlbinlog', 'lppasswd', 'dbus-daemon', 'emacs-24.3', 'nroff', 'locate', 'setup-nsssysinit.sh', 'igawk', 'mlx_fs_dump', 'gsdj', 'tic', 'lsinitrd', 'weather', 'gcov', 'mono-boehm', 'patch', 'sudo', 'ib_read_bw', 'info', 'dump2psl.pl', 'xsetmode', 'jrunscript', 'kdumpctl', 'lslocks', 'gnroff', 'shuf', 'vmstat', 'latex', 'lslogins', 'lua', 'flex++', 'ssh-keyscan', 'mlxtrace_ext', 'msgattrib', 'signtool', 'rpmverify', 'getent', 'pmieconf', 'ssh-agent', 'xdg-desktop-menu', 'ibdmchk', 'ibnetsplit', 'link', 'gpg-agent', 'pmlogcheck', 'mlxlink_ext', 'dbus-update-activation-environment', 'bc', 'nice', 'raw', 'mlxgearbox', 'pmevent', 'riostream', 'wftopfa', 'aserver', 'mget_temp', 'javadoc', 'unxz', 'ib_send_bw', 'cpp', 'desktop-file-install', 'checksctp', 'ucmatose', 'gpg', 'jsadebugd', 'kpsewhich', 'aria_read_log', 'whereis', 'systemd-tty-ask-password-agent', 'pmerr', 'mysqldump', 'mstfwtrace', 'java', 'dvi2fax', 'ibv_intf', 'tzselect', 'ibv_dctgt', 'fmtutil', 'gsoelim', 'chmem', 'ssh', 'mstmtserver', 'wsdl2', 'pmdate', 'modutil', 'vncserver', 'pmval', 'pmstore', 'systemd-stdio-bridge', 'paste', 'xdg-email', 'POST', 'pod2text', 'gacutil', 'setpriv', 'mandb', 'lsattr', 'tracepath6', 'xwd', 'rdma_server', 'desktop-file-validate', 'mget_temp_ext', 'nvidia-modprobe', 'truncate', 'numfmt', 'mlnx_qos', 'xbiff', 'ppc64', 'lwp-request', 'xgamma', 'rmail', 'mkfifo', 'luac', 'hsc2hs-ghc', 'texconfig-sys', 'systemd-detect-virt', 'secon', 'rebuild-jar-repository', 'sim_client', 'h2ph', 'pminfo', 'f95', 'bashbug-64', 'mktemp', 'gneqn', 'sum', 'unbuffer', 'newgrp', 'mlxfwmanager', 'allcm', 'usleep', 'etags', 'ikdasm', 'mac2unix', 'sha384sum', 'wsimport', 'hwloc-patch', 'ofed_info', 'cvtsudoers', 'krb5-config', 'mstfwreset', 'pdfetex', 'dir', 'sprof', 'run_perftest_multi_devices', 'cp', 'ypwhich', 'xset', 'jstack', 'sxpm', 'pmclient', 'chattr', 'run-parts', 'mstconfig', 'gapplication', 'extcheck', 'mlxvpd', 'ghc-pkg', 'eu-elfcompress', 'fribidi', 'fc', 'x11perfcomp', 'logger', 'watchgnupg', 'dtest', 'xeyes', 'csslint-0.6', 'timeout', 'makedb', 'ibdump', 'chcon', 'aconnect', 'ib_atomic_lat', 'stream', 'icewm-xdg-menu', 'runhaskell', 'msgunfmt', 'lexgrog', 'lsipc', 'expect', 'bashbug', 'xz', 'fmtutil-sys', 'gettext.sh', 'glib-compile-schemas', 'pmstat', 'javah', 'ipcmk', 'pstruct', 'c2ph', 'mtserver', 'luatex', 'cert-sync', 'mlxmdio', 'rdma_xserver', 'pmlogger', 'mountpoint', 'eu-ranlib', 'rmdir', 'hostname', 'pmap', 'ipcalc', 'zipnote', 'lwp-dump', 'pdf2ps', 'gpasswd', 'animate', 'zsh', 'python-config', 'db_deadlock', 'vpi_tcpdump', 'jcmd', 'migratepages', 'resize', 'showrgb', 'captoinfo', 'pax', 'rstream', 'jps', 'ps', 'systemd-cgls', 'db_tuner', 'systemd-inhibit', '[', 'ul', 'snice', 'rpmspec', 'wc', 'pod2html', 'timed-read', 'ibdiagnet', 'lwp-download', 'haddock-ghc-7.6.3', 'cmsutil', 'updmap', 'xvidtune', 'last', 'mlxprivhost', 'top', 'pmdumplog', 'scriptreplay', 'urlgrabber', 'mstprivhost', 'quotasync', 'chgrp', 'touch', 'neqn', 'fc-cat', 'xmag', 'msgen', 'pack200', 'mount', 'md5sum', 'sudoreplay', 'ps2ps', 'gmake', 'autom4te', 'dircolors', 'sha256sum', 'pre-grohtml', 'tsort', 'getconf', 'eu-elflint', 'texlua', 'db_log_verify', 'fc-scan', 'getopt', 'pmie2col', 'vi', 'tload', 'ibv_task_pingpong', 'atrm', 'gettext', 'dc', 'db_archive', 'rdma_client', 'xorg-x11-fonts-update-dirs', 'fonttosfnt', 'etex', 'pf2afm', 'aplaymidi', 'mcookie', 'jar', 'nslookup', 'setxkbmap', 'ipmitool', 'mlxdump', 'hwloc-ls', 'realpath', 'ps2ascii', 'ksh', 'mlxmcg', 'pdftex', 'lpstat', 'read', 'dbus-send', 'perldoc', 'pkcs1-conv', 'jdeps', 'jstatd', 'kpsexpand', 'lwp-mirror', 'mailq', 'gnuplot', 'kpsepath', 'sort', 'grep-changelog', 'fgrep', 'eu-readelf', 'numastat', 'shcomp', 'sync', 'flock', 'timed-run', 'cvt', 'rpm', 'composite', 'autoheader', 'setfacl', 'db_printlog', 'db_verify', 'zcmp', 'expand', 'kpseaccess', 'xmllint', 'csplit', 'bdftopcf', 'ypdomainname', 'soelim', 'podselect', 'kmod', 'mono-heapviz', 'alsaloop', 'pmlogmv', 'cut', 'nvidia-bug-report.sh', 'xzgrep', 'pinentry', 'lpstat.cups', 'eu-ar', 'dvired', 'nettle-lfib-stream', 'jinfo', 'c89', 'mono-service', 'runghc', 'hwloc-bind', 'gtf', 'journalctl', 'dbus-binding-tool', 'check-binary-files', 'hwloc-compress-dir', 'icewm-set-gnomewm', 'perf', 'lpoptions', 'msgconv', 'printafm', 'lpr', 'tput', 'keyctl', 'ex', 'bzless', 'sha512sum', 'withsctp', 'ssh-add', 'mesg', 'findmnt', 'gpgconf', 'host', 'agentxtrap', 'umask', 'raw_ethernet_fs_rate', 'fipshmac', 'gdbus', 'mono-sgen-gdb.py', 'gtester-report', 'ibv_dcini', 'lesspipe.sh', 'mysqlshow', 'piconv', 'xload', 'gtk-query-immodules-2.0-64', 'rmail.postfix', 'dshbak', 'localectl', 'ipcs', 'gex', 'locale', 'db_checkpoint', 'i2c', 'ldd', 'gs', 'arecordmidi', 'msql2mysql', 'autoupdate', 'find', 'chmod', 'amsstat', 'eu-addr2line', 'rpcgen', 'c++filt', 'sndfile-resample', 'hwloc-ps', 'look', 'ibdmtr', 'genpmda', 'pmprobe', 'rksh', 'pod2man', 'xzcmp', 'mlxfwreset', 'zipgrep', 'utmpdump', 'more', 'gdk-pixbuf-query-loaders-64', 'tc_wrap.py', 'rmiregistry', 'gpg-connect-agent', 'xfontsel', 'gsnd', 'xkbcomp', 'mprof-report', 'mktextfm', 'namei', 'gsettings', 'numademo', 'mpi-selector-menu', 'view', 'icewmbg', 'gcc-ranlib', 'hesinfo', 'cvs', 'pckt_drop', 'gnuplot-wx', 'objdump', 'mckey', 'chrt', 'unix-lpr.sh', 'nail', 'mlnx_qcn', 'sss_ssh_knownhostsproxy', 'ibv_uc_pingpong', 'envsubst', 'ghci-7.6.3', 'mkinitrd', 'autoconf', 'eu-unstrip', 'mysqlcheck', 'ipcrm', 'pango-list', 'lsns', 'loginctl', 'otfdump', 'hwloc-diff', 'mysql_waitpid', 'uniq', 'nvidia-xconfig', 'gvimtutor', 'setup-nsssysinit', 'dvipdf', 'wdctl', 'tee', 'killall', 'cabal', 'mcview', 'ldapsearch', 'sg', 'flex', 'runcon', 'xzegrep', 'gpg2', 'identify', 'tac', 'colcrt', 'pmgenmap', 'font2c', 'nvidia-cuda-mps-server', 'unpack200', 'readelf', 'mlxi2c', 'hexdump', 'ssltap', 'ibtopodiff', 'cxpm', 'msgcat', 'update-mime-database', 'singularity', 'pmloglabel', 'mono-sgen', 'xcutsel', 'irb', 'pmjson', 'login', 'factor', 'linux32', 'machinectl', 'lsb_release', 'vimx', 'gio', 'wget', 'troff', 'busctl', 'lastb', 'pmclient_fg', 'native2ascii', 'mono-service2', 'ibv_srq_pingpong', 'mknod', 'strace', 'sexp-conv', 'time', 'gio-querymodules-64', 'Mail', 'du', 'dconf', 'mlnx_get_vfs.pl', 'domainname', 'alsabat', 'systemd-tmpfiles', 'strace-log-merge', 'ibv_rc_pingpong', 'python2.7', 'sleep', 'cmtime', 'pwdx', 'lpunlock', 'eject', 'mdevices_info', 'ifnames', 'sha224sum', 'koi8rxterm', 'sed', 'getopts', 'xlogo', 'mlxuptime', 'newaliases.postfix', 'aseqnet', 'systemd-firstboot', 'xargs', 'nettle-hash', 'python2.7-config', 'ncursesw5-config', 'pcre-config', 'qperf', 'eu-make-debug-archive', 'newaliases', 'chage', 'build-classpath', 'mysqlaccess', 'bzdiff', 'isosize', 'mstmwrite', 'expr', 'pwmake', 'systemd-escape', 'ncurses5-config', 'xsetroot', 'ibnlparse', 'lstopo', 'lessecho', 'autoreconf', 'gslj', 'orbd', 'clear', 'gctags', 'vncpasswd', 'icewm-session', 'atq', 'mysqlimport', 'rpmkeys', 'xxd', 'xhost', 'ibv_asyncwatch', 'wsgen', 'sotruss', 'mstflint', 'run_perftest_loopback', 'watch', 'net-snmp-config', 'msgfilter', 'systemd-hwdb', 'lastlog', 'slogin', 'gconftool-2', 'ldapdelete', 'test', 'mst_ib_add', 'pkexec', 'zipcloak', 'rsyslog-recover-qi.pl', 'pkaction', 'unix2dos', 'groff', 'shred', 'itrace', 'xmlcatalog', 'texhash', 'systemd-machine-id-setup', 'flint', 'ibdiagnet_csv2xml.py', 'iecset', 'hwloc-annotate', 'eps2eps', 'autoscan', 'grotty', 'colrm', 'bash', 'glib-gettextize', 'yes', 'lz4', 'epstopdf', 'gpgparsemail', 'spax', 'pr', 'kill', 'bzcmp', 'mlxdump_ext', 'ypmatch', 'ibv_ud_pingpong', 'aria_ftdump', 'w', 'logname', 'ksh93', 'od', 'xmodmap', 'gpic', 'pmlogsize', 'p11-kit', 'systemd-nspawn', 'm17n-conv', 'bzip2', 'timedatectl', 'gresource', 'rping', 'infocmp', 'unmunge', 'nl', 'users', 'minit', 'idlj', 'xstdcmap', 'msgmerge', 'a2p', 'csharp', 'mft_uninstall.sh', 'testgdbm', 'gdk-pixbuf-thumbnailer', 'hsc2hs', 'lpq', 'glib-genmarshal', 'tailf', 'quota', 'hca_self_test.ofed', 'id', 'stty', 'update-ca-trust', 'mlxconfig', 'setreg', 'xzfgrep', 'mv', 'fipscheck', 'ftp-rfc', 'disco', 'sqlsharp', 'join', 'xsetpointer', 'ppc', 'rlogin-cwd', 'vimdiff', 'lchfn', 'tr', 'chacl', 'echo', 'netstat', 'texlinks', 'pkla-check-authorization', 'display', 'strip', 'xdg-settings', 'rpdcp', 'mstdump', 'mkpasswd', 'ping6', 'mlxphyburn', 'pydoc', 'ps2pdf12', 'jstat', 'gpgv', 'eu-strings', 'pphs', 'eu-elfcmp', 'jobs', 'zfgrep', 'systemd-delta', 'update-gtk-immodules', 'glib-compile-resources', 'gsettings-data-convert', 'pic', 'mlx_fpga', 'dotlockfile', 'gobject-query', 'redhat_lsb_init', 'Xorg', 'import', 'sftp', 'emacsclient', 'raw_ethernet_lat', 'zless', 'aria_pack', 'msgexec', 'false', 'crlutil', 'nvidia-cuda-mps-control', 'oclock', 'dnsdomainname', 'javac', 'pcp', 'mail', 'fwtrace', 'xdpr', 'awk', 'tclsh8.5', 'gprof', 'xkibitz', 'my_print_defaults', 'rcopy', 'passmass', 'pod2latex', 'freetype-config', 'bzip2recover', 'bdftruncate', 'x0vncserver', 'yum', 'abs2rel', 'geoiplookup', 'pcp2csv', 'build-classpath-directory', 'otfview', 'znew', 'mstmread', 'aplay', 'gvim', 'nvvs', 'ldapmodify', 'nv-hostengine', 'pl2pm', 'javap', 'pango-view', 'ibsim', 'sss_ssh_authorizedkeys', 'hostid', 'create-jar-links', 'mcra', 'zdiff', 'pathchk'] ['trqauthd', 'rhnsd', 'rhn_check', 'spacewalk-channel', 'rhnreg_ks', 'rhn_register', 'rhn-channel', 'rhn-profile-sync', 'subscription-manager', 'userhelper', 'pifconfig', 'pethtool', 'virt-what', 'atopacctd', 'abrt-install-ccpp-hook', 'abrt-dbus', 'abrt-configuration', 'abrtd', 'abrt-server', 'abrt-auto-reporting', 'vgcfgrestore', 'selabel_digest', 'resize2fs', 'luserdel', 'bootlist', 'fdisk', 'thin_trim', 'e4defrag', 'tracepath', 'pwhistory_helper', 'mkdumprd', 'mke2fs', 'mkfs.ext2', 'mkfs.ext3', 'mkfs.ext4', 'badblocks', 'mii-diag', 'lpc', 'lgroupmod', 'rpc.statd', 'lsdevinfo', 'ibfindnodesusing.pl', 'ifup', 'alsa-info', 'ibdiscover.pl', 'load_policy', 'rtcwake', 'thin_repair', 'usermod', 'xfs_freeze', 'lvs', 'xfs_mdrestore', 'plipconfig', 'groupmod', 'fsck.xfs', 'lsvpd', 'unix_update', 'readprofile', 'vgreduce', 'losetup', 'sshd-keygen', 'update-alternatives', 'rtas_event_decode', 'selabel_lookup_best_match', 'cracklib-check', 'ntptime', 'partx', 'agetty', 'pvdisplay', 'vmcore-dmesg', 'show_irq_affinity_hints.sh', 'mlnx_net_rules', 'kexec', 'cracklib-unpacker', 'lsprop', 'thin_dump', 'alternatives', 'vendor_pre_uninstall.sh', 'yppoll', 'swaplabel', 'lvchange', 'blockdev', 'ibdatacounts', 'dracut', 'useradd', 'zdump', 'alsa-info.sh', 'lparstat', 'ctrlaltdel', 'smpdump', 'ss', 'swapoff', 'swapon', 'zic', 'ipmaddr', 'sys-unconfig', 'sldd.sh', 'iconvconfig.ppc64le', 'iconvconfig', 'tcsd', 'ibhosts', 'dmsetup', 'lid', 'chcpu', 'cache_dump', 'ibchecknode', 'ibroute', 'depmod', 'vgremove', 'pseries_platform', 'nvme', 'getpcaps', 'ppp-watch', 'lscfg', 'cache_repair', 'xfs_logprint', 'postlock', 'serv_config', 'dumpe2fs', 'nvram', 'udevadm', 'parted', 'lsmod', 'tc', 'ntpdate', 'sestatus', 'fsck.minix', 'rpcinfo', 'pmc', 'groupmems', 'srp_daemon.sh', 'iptables-restore', 'pwunconv', 'routel', 'postqueue', 'ls-vdev', 'lpasswd', 'sysctl', 'e2freefrag', 'dmstats', 'capsh', 'sendmail', 'xfs_db', 'pam_timestamp_check', 'chpasswd', 'lvdisplay', 'hwstamp_ctl', 'lnewusers', 'zramctl', 'yptest', 'quotacheck', 'ibdatacounters', 'lvcreate', 'mkdict', 'vgmknodes', 'iptables-save', 'fixfiles', 'set_irq_affinity_cpulist.sh', 'lspci', 'xtables-multi', 'blkdeactivate', 'postlog', 'fsck', 'lsslot', 'xfs_quota', 'rdisc', 'update_flash_nv', 'srp_daemon', 'bridge', 'saquery', 'ibswitches', 'addpart', 'smpquery', 'sss_cache', 'clockdiff', 'ntpdc', 'ypset', 'runlevel', 'sssd', 'build-locale-archive', 'ntpd', 'nfsidmap', 'ipmievd', 'atrun', 'postcat', 'odp_stat.sh', 'lvconvert', 'e2fsck', 'fsck.ext2', 'fsck.ext3', 'fsck.ext4', 'rtstat', 'ibprintrt.pl', 'ifconfig', 'era_dump', 'xfs_growfs', 'sminfo', 'lvmsadc', 'ibclearcounters', 'dmfilemapd', 'restorecon', 'thin_ls', 'ldattach', 'grpconv', 'vendor_post_uninstall.sh', 'ntpq', 'nvsetenv', 'era_check', 'connectx_port_config', 'postconf', 'delpart', 'try-from', 'vpdupdate', 'era_restore', 'avcstat', 'munged', 'snmpd', 'mountstats', 'mklost+found', 'lvmsar', 'ls-veth', 'snmptrapd', 'route', 'ibsrpdm', 'ibstat', 'phc2sys', 'lvresize', 'cracklib-packer', 'new-kernel-pkg', 'fsck.nfs', 'irqbalance', 'logrotate', 'xfs_rtcp', 'rpc.rquotad', 'ibcacheedit', 'genhomedircon', 'genl', 'exportfs', 'xfs_bmap', 'grpck', 'alsactl', 'cache_writeback', 'newusers', 'selabel_partial_match', 'makedumpfile', 'show_gids', 'mlnx_affinity', 'ofed_uninstall.sh', 'vgexport', 'lvmdump', 'nslcd', 'pvresize', 'partprobe', 'set_irq_affinity_bynode.sh', 'show_irq_affinity.sh', 'dump_fts', 'errinjct', 'hardlink', 'matchpathcon', 'fdformat', 'vgextend', 'fsfreeze', 'ofpathname', 'pwck', 'dhclient', 'postdrop', 'sendmail.postfix', 'vgcfgbackup', 'sulogin', 'hack-coff', 'lpc.cups', 'xfs_info', 'ypbind', 'nameif', 'nstat', 'mkfs.cramfs', 'sim_server', 'activate_firmware', 'nfsstat', 'opensm', 'gssproxy', 'ibaddr', 'mkfs.xfs', 'groupadd', 'halt', 'osmtest', 'lvmpolld', 'lsmcode', 'pvs', 'lvremove', 'start-statd', 'debugfs', 'setpci', 'selinuxexeccon', 'ibportstate', 'rtmon', 'ibcheckerrors', 'vgimportclone', 'e2label', 'tune2fs', 'rtas_dump', 'postfix', 'lnstat', 'dump_mfts.sh', 'thin_restore', 'check_lft_balance.pl', 'ibidsverify.pl', 'cma_roce_tos', 'selabel_lookup', 'ip6tables-save', 'rmmod', 'cache_metadata_size', 'nsm', 'run_srp_daemon', 'runuser', 'xfs_metadump', 'getcap', 'sefcontext_compile', 'ip', 'iptables', 'glibc_post_upgrade.ppc64le', 'fsadm', 'iblinkinfo.pl', 'ibqueryerrors.pl', 'setfiles', 'sys_ident', 'dhclient-script', 'tracepath6', 'findfs', 'getsebool', 'cbq', 'e2image', 'blkdiscard', 'uuserver', 'ifcfg', 'shutdown', 'smtp-source', 'install-info', 'set_nodedesc.sh', 'xfs_repair', 'rsyslogd', 'rpcdebug', 'lvm', 'mkhomedir_helper', 'pvscan', 'logsave', 'pwconv', 'unsquashfs', 'ntp-keygen', 'e2undo', 'blkmapd', 'vgscan', 'osd_login', 'umount.nfs', 'ibcheckerrs', 'rpc.nfsd', 'iblinkinfo', 'ibtracert', 'cfdisk', 'common_irq_affinity.sh', 'modinfo', 'sasldblistusers2', 'rtpr', 'selinuxconlist', 'wrapper', 'blkid', 'ibclearerrors', 'lvmconf', 'xqmstats', 'vgsplit', 'postsuper', 'thin_check', 'filefrag', 'adduser', 'redhat_lsb_trigger.ppc64le', 'dump_lfts.sh', 'drmgr', 'cache_check', 'crond', 'pvchange', 'vendstat', 'setenforce', 'addgnupghome', 'tcpdmatch', 'reboot', 'vipw', 'rpc.gssd', 'cracklib-format', 'perfquery', 'sln', 'pivot_root', 'create-cracklib-dict', 'quotaon', 'groupdel', 'ptp4l', 'mkfs', 'xfs_estimate', 'dmeventd', 'gss-server', 'usernetctl', 'show_counters', 'xfs_ncheck', 'vgchange', 'grpunconv', 'quotastats', 'iptunnel', 'dkms', 'resizepart', 'sysctl_perf_tuning', 'xfs_mkfile', 'repquota', 'ip6tables-restore', 'lusermod', 'wipefs', 'sshd', 'ifdown', 'cache_restore', 'arp', 'pvremove', 'clock', 'tickadj', 'ldconfig', 'selinuxdefcon', 'lvreduce', 'vigr', 'quot', 'vgdisplay', 'lchage', 'arping', 'ibacm', 'ibcheckportstate', 'smparquery', 'insmod', 'addnote', 'lvmetad', 'ibprintca.pl', 'switch_root', 'hwclock', 'kpartx', 'ifstat', 'sysinfo-snapshot.py', 'setsebool', 'edquota', 'killall5', 'pidof', 'anacron', 'service', 'sfdisk', 'vgimport', 'vgrename', 'sm-notify', 'lvmdiskscan', 'lvscan', 'selinuxenabled', 'nologin', 'atd', 'accessdb', 'ibcheckstate', 'userdel', 'lsvio', 'ibnodes', 'weak-modules', 'quotaoff', 'setquota', 'era_invalidate', 'automount', 'xfs_copy', 'sosreport', 'consoletype', 'phc_ctl', 'safe_finger', 'ppc64_cpu', 'mlnx_eswitch_set', 'uesensor', 'rpc.mountd', 'ls-vscsi', 'ibsysstat', 'modprobe', 'ibstatus', 'lgroupadd', 'vgs', 'rtacct', 'pdata_tools', 'telinit', 'setup_mr_cache.sh', 'poweroff', 'lsof', 'slattach', 'visudo', 'ibcheckportwidth', 'update-pciids', 'nscd', 'update_flash', 'smtp-sink', 'mkswap', 'sushell', 'lvmconfig', 'mktree', 'xfs_admin', 'ctstat', 'lvrename', 'ibmirror', 'pam_tally2', 'chkconfig', 'pam_console_apply', 'xfs_io', 'ib2ib_setup', 'nfsdcltrack', 'mksquashfs', 'umount.nfs4', 'arpd', 'rtas_ibm_get_vpd', 'setcap', 'rtas_dbg', 'chroot', 'ibqueryerrors', 'grubby', 'timemaster', 'ibchecknet', 'installkernel', 'vgmerge', 'rpc.idmapd', 'create-munge-key', 'routef', 'mount.nfs', 'pvmove', 'ip6tables', 'postmulti', 'ibnetdiscover', 'key.dns_resolver', 'request-key', 'alsabat-test.sh', 'genhostid', 'ibswportwatch.pl', 'postmap', 'init', 'ibprintswitch.pl', 'ether-wake', 'ifenslave', 'selinux_restorecon', 'fstrim', 'xfs_fsr', 'packer', 'lgroupdel', 'vgcreate', 'mount.nfs4', 'ethtool', 'fsck.cramfs', 'postalias', 'lvextend', 'vgconvert', 'saslpasswd2', 'netreport', 'mkfs.minix', 'cma_roce_mode', 'ibcheckwidth', 'thin_metadata_size', 'faillock', 'thin_rmap', 'ibcheckport', 'pvck', 'postkick', 'ibrouters', 'pvcreate', 'tcpd', 'vgck', 'rpcbind', 'ping6', 'opal-prd', 'thin_delta', 'mii-tool', 'showmount', 'ibccquery', 'devlink', 'set_irq_affinity.sh', 'ibping', 'nfsiostat', 'mlnx_tune', 'hvcsadmin', 'unix_chkpwd', 'getenforce', 'luseradd', 'set_poweron_time', 'semodule', 'convertquota', 'applygnupgdefaults', 'fuser', 'ibccconfig', 'compat_gid_gen'] ['darshan-mk-log-dirs.pl', 'darshan-gen-cc.pl', 'darshan-gen-cxx.pl', 'darshan-gen-fortran.pl', 'darshan-config'] ['htar', '5.0.2.9', '6.0.0.11', '5.0.2.11', 'hsi', '6.2.0.1', 'TA_Status', 'test_TA'] ['esub', 'esub.poe', 'pim', 'lsf_daemons', 'rla', 'elim.jsdl', 'named', 'esub.tv', 'esub.openmp', 'esub.mvapich', 'esub.dprov', 'sbatchd', 'esub.bproc', 'esub.openmpi', 'esub.oldtvpoe', 'esub.mpichp4', 'elim.frequency', 'esub.tvlammpi', 'esub.oldpoe', 'lim', 'esub.ls_dyna', 'esub.tvmpich_gm', 'esub.fluent', 'nios', 'esub.gold', 'esub.mpich_gm', 'esub.pvm', 'esub.intelmpi', 'esub.mpich_mx', 'eauth.krb5', 'res', 'tmp.elim.sa', 'eauth', 'esub.tvpoe', 'mesub', 'esub.mpich2', 'melim', 'esub.lammpi'] ['csm_bb_vg_create', 'csm_node_find_job', 'csm_cluster_query_state', 'csm_allocation_create', 'csm_ib_cable_update', 'csm_allocation_query_active_all', 'csm_bb_lv_delete', 'csm_allocation_update_state', 'csm_switch_attributes_update', 'csm_soft_failure_recovery', 'csm_diag_run_query', 'csm_allocation_step_begin', 'csm_bb_vg_delete', 'csm_node_attributes_query_history', 'csm_allocation_query_details', 'csm_node_attributes_query_details', 'csm_diag_run_query_details', 'csm_ras_event_create', 'csm_diag_run_begin', 'csm_node_resources_query_all', 'csm_allocation_query', 'csm_ras_event_query_allocation', 'csm_switch_attributes_query', 'csm_node_attributes_query', 'csm_switch_attributes_query_details', 'csm_infrastructure_health_check', 'csm_node_attributes_update', 'csm_ras_msg_type_create', 'csm_ras_msg_type_delete', 'csm_ras_msg_type_query', 'csm_node_query_state_history', 'csm_switch_attributes_query_history', 'csm_allocation_step_query_active_all', 'csm_bb_lv_create', 'csm_node_resources_query', 'csm_allocation_delete', 'csm_ras_event_query', 'csm_allocation_resources_query', 'csm_diag_result_create', 'csm_node_delete', 'csm_ras_msg_type_update', 'csm_bb_vg_query', 'csm_ib_cable_query_history', 'csm_diag_run_end', 'csm_allocation_step_query', 'csm_allocation_step_query_details', 'csm_allocation_update_history', 'csm_allocation_step_end', 'csm_ib_cable_query', 'csm_jsrun_cmd', 'csm_bb_lv_query'] [] [] ['decoder'] ['ibmsquit', 'ibis', 'dump2slvl.pl', 'ibdiagpath', 'IBMgtSim', 'dump2psl.pl', 'ibdmchk', 'mkSimNodeDir', 'ibdiagui', 'ibdiagnet', 'RunSimTest', 'ibdmtr', 'ibtopodiff', 'ibdmsh', 'ibnlparse', 'ibmssh'] ['jsrun', 'jswait', 'jskill', 'query_env', 'export_slurm_env', 'jsm_simulator', 'js_task_info', 'admin', 'jsproxy', 'jslist', 'export_smpi_env', 'jsm', 'stock'] ['hiera', 'facter', 'puppet', 'facter-ng.bat'] ['mmtrace', 'mmsysmon.py', 'mmnfsfuncs', 'mmcesnfsmonitor', 'mmjob', 'mmdelcallback', 'tsdf', 'tschfileset', 'tslsdisk', 'tslspolicy', 'tslsfs', 'tsdelsnapshot', 'tslsfileset', 'tsnsdaccess', 'tscrsnapshot', 'tslspool', 'tssnapdir', 'tsedquota', 'tsusercmd', 'tslssnapshot', 'tsstatus', 'mmcrnsd', 'tsgetscsiinfo', 'mmqosnice', 'mmsetquota', 'mmdelfileset', 'tsprpreemptabort', 'cleanupkeystonedb', 'mmsdrfsdef.Linux', 'mmcesuserauthcrservice', 'mmdumpfilocks', 'tschdisk', 'tsaddpdisk', 'tsctl', 'tskafkaauth', 'tsdbfs', 'tscheckquota', 'tsfsctl', 'tsrpldisk', 'tschpdisk', 'tsrecgroupserver', 'tscmd', 'tsreclaimspace', 'tscrrecgroup', 'tschstoragepool', 'tsrestripefs', 'tsdefragfs', 'tsfileid', 'tsdsh', 'tsdeldisk', 'tsquotaon', 'tschfs', 'tsdefedquota', 'tsunmount', 'tsdelpdisk', 'tsressnapshot', 'tscrvdisk', 'tsquotaoff', 'tsexpelnode', 'tslsvdisk', 'tscrfs', 'tschmgr', 'tslsrecgroup', 'tslsrecoverygroupevents', 'tsdelvdisk', 'tsnsddiscover', 'tsdefquotaoff', 'tscrfileset', 'tsdelfs', 'tsdbvdisk', 'tsdelfileset', 'tsadddisk', 'tscachectl', 'tsdefquotaon', 'tschcarrier', 'tsauth', 'tslsqos', 'tslspdisk', 'tsnsdrediscover', 'tsremount', 'tsdelrecgroup', 'tschpool', 'tsrepquota', 'tschqos', 'tschrecgroup', 'tsfsck', 'tsdiag', 'tssbrff', 'mmlsfileset', 'mmexectsmcmd', 'mmgetkafkaspecinfo', 'mmfs', 'mmchconfig', 'ces.snap.py', 'mmperfmon', 'tsgetacl', 'clstrwatchcallbacks', 'mmcessmblsconfig', 'tslsattr', 'mmcesmonitord', '.links', 'mmnfsgrace', 'mmhelp-apolicy', 'mmpmon', 'mmcesnfsdelexport', 'mmchpolicy', 'gui.snap.py', 'tspcache', 'perfmon.snap.py', 'mmsdrquerydef', 'mmlsqos', 'mmxargs', 'tschattr', 'mmclidecode', 'clstrwatchconsumermanager', 'mmfsctl', 'mmpsnap', 'mmccrnv', 'perf.snap.py', 'mmcespnfsip', 'mmnfsnodeback', 'tsimgrestore', 'mmcesuserauthckservice', 'mmchnodeclass', 'pymmcesnfslsexport.py', 'mmdelacl', 'mmumount', 'mmcrnodeclass', 'mmsysmonc', 'tspcacheevict', 'mmexecvfile', 'sshwrap', 'mmgetifconf', 'mmfs-ppc64-rh4', 'sysmon.snap.py', 'mmimgrestore', 'mmcesobjaccesslinkfset', 'mmchecksubsys', 'mmcesop', 'tspmon', 'mmdefedquota', 'mmdelsnapshot', 'mmreclaimspace', 'mmsysmoncontrol', 'tsspectrumdiscover', 'mmyfields', 'mmchnode', 'mmrestorefs', 'mmcallhome', 'mmexportfs', 'mmcesnfsloadexport', 'tslspool34', 'mmnfsmonitor', 'mmsnmpagentd30', 'tsfindinode', 'mmfsfuncs.Linux', 'mmdumpperfdata', 'mmcesobjcrbase', 'mmdsh', 'objmetric_count.py', 'mmauditmount', 'mmcessmblsexport', 'mmdevdiscover', 'mmlsnode', 'mmautoload', 'mmcesnfscrexport', 'mmchnsd', 'mmfileid', 'mmcesnfsfuncs', 'mmcesrecovernode', 'mmlsfs', 'mmcollectdebugdata', 'tseditacl', 'tsbuhelper', 'tslinkfileset', 'tspreparedisk', 'mmrpldisk', 'mmdelnode', 'mmceslog', 'mmcrfsc', 'mmcesblockfuncs', 'mmgensymtable', 'mmfsd', 'mmnfsinstall', 'mmdspmsg', 'mmclone', 'mmchfs', 'mmlsdisk', 'mmnfstakeover', 'tsyselect', 'mmnfsup', 'mmcessmbcrexport', 'tsaddrmap', 'mmnetverify', 'mmchpool', 'msgqueue.snap.py', 'mmcesobjlscfg', 'tsrestorefileset', 'mmbuildgpl', 'mmsmbman', 'tsfindname', 'mmcesloadmonitor', 'mmcesobjaccess', 'mmaddcallback', 'mmcesobjpolicyfuncs', 'mmcessmbdelexport', 'msgqueueDaemonManager', 'core.snap.py', 'tsgskkm', 'mmauth', 'mmedquota', 'mmshutdown', 'tsdbmemleakparse', 'mmadquery', 'mmsdrcli', 'mmccr', 'mmcesobjchstoragepolicy', 'mmcesnfschcfg', 'tswatchmonitor', 'mmmigratefs', 'mmputacl', 'mmlscluster', 'commonsnap.py', 'mmcesservice', 'mmadddisk', 'tslsmgr', 'tssbrindex', 'mmafmlocal', 'mmlsperfdata', 'mmnfsuninstall', 'mmcmi', 'mmcesobjs3', 'tspcachescan', 'kdump-4.14.0-115.14.1.el7a.ppc64le', 'mmlsnsd', 'mmchcluster', 'mmunmount', 'mmnfsquorumloss', 'mmcesnetdeladdress', 'mmlsquota', 'mmces', 'pymmcesnfsfuncs.py', 'tsputacl', 'mmchqos', 'tsprshowfence', 'gpfsrunlevel', 'mmimgbackup', 'mmsdrrestore', 'tsqosnice', 'mmsdrserv', 'mmmsgqueue', 'mmcesmmcdelexport', 'mmlinkfileset', 'mmrestoreconfig', 'mmdelnodeclass', 'mmsmbfuncs', 'mmcesobjcfgman', 'mmfixcfg', 'mmcesnfslsexport', 'tsdbmemleak', 'mmaudit', 'mmcesnfslscfg', 'mmsmbsupportedoptions', 'mmafmconfig', 'mmlscallback', 'mmlsmgr', 'tsbackup', 'mmcesminfuncs', 'mmfsmount', 'mmcesmmcchexport', 'tsrestripefile', 'kdump', 'mmimportfs', 'mmcesobjcrring', 'mmnfs', 'mmcommon', 'mmcesnetmvaddress', 'mmsnmpagentd', 'mmcesobjfuncs', 'gui.callhome.py', 'tsbackup33', 'lxtrace', 'mmsdrfsdef', 'mmsmb', 'mmobj', 'tsprclear', 'mmceshdfsfuncs', 'mmcesnetworkmonitor', 'tspcacheutil', 'mmqos', 'mmlspolicy', 'mmrestripefs', 'mmcessmbfuncs', 'mmaddnode', 'mmblock', 'mmcrfs', 'mmmount', 'tsprreadres', 'mmnsddiscover', 'mmprotocoltrace', 'mmglobfuncs', 'tsprreadkeys', 'mmnfsdown', 'gpfs.snap', 'object.snap.py', 'mmcesnetaddaddress', 'mmcesobjchcfg', 'mmrsh', 'mmcesobjmr', 'mmeditacl', 'auditConsumerManager', 'mmlsconfig', 'mmsync', 'mmgetacl', 'mmcesuserauthrmservice', 'mmhealth', 'tsdelacl', 'mmremote', 'mmpercentencode', 'mmcloudfuncs', 'daemonize', 'mmcesnfschexport', 'tsclone', 'callhome.snap.py', 'clstrwatchreplaymanager', 'tsnetverify', 'mmstartup', 'mmcachectl', 'mmgskkm', 'mmdefragfs', 'mmsnapdir', 'tsapolicy', 'mmrcmd', 'mmexpelnode', 'mmsdrquery', 'ece.callhome.py', 'mmchdisk', 'mmcesnetdown', 'mmlslicense', 'mmrestripefile', 'mmcrfileset', 'mmnfscleanup', 'mmlogmsg', 'mmcessmbexportacl', 'mmchlicense', 'mmsetrcmd', 'tsclwatchrules', 'mmdynamicmap', 'tssetquota', 'tsprreserve', 'wftopics', 'mmvaryonvg', 'mmsnmpagentd10', 'mmbackupconfig', 'mmdefquotaon', 'mmlsattr', 'mmcesfuncs', 'mmfsadm', 'mmcesmmccrexport', 'runmmfs', 'mmafmcmd', 'ccrrestore', 'mmunlinkfileset', 'basicsnap.py', 'mmafmhomeconfig', 'auth.snap.py', 'fab3.snap.py', 'mmuserauth', 'object.callhome.py', 'mmlogsort', 'mmdf', 'mmcesobjcrstoragepolicy', 'mmdefquotaoff', 'mmtracectl', 'mmdump', 'tsprquery', 'mmfsenv', 'mmfsfuncs', 'mmrepquota', 'mmcesdr', 'mmcesnode', 'tslsquota', 'mmdsm', 'mmdelnsd', 'mmnfsinit', 'mmcrsnapshot', 'mmlockf', 'mmcesauthfuncs', 'network.callhome.py', 'mmglobfuncs.Linux', 'tsprinquiry', 'nfs.snap.py', 'mmcesnetlsaddress', 'mmapplypolicy', 'mmdumpkthreads', 'tswatchgpfsconduit', 'mmcessmbchconfig', 'perfmon.callhome.py', 'mmauditpreunmount', 'mmrcp', 'scpwrap', 'mmremotefs', 'tsunlinkfileset', 'mmcrcluster', 'mmnfspreunmount', 'mmcessmbchexport', 'tsauditconsumer', 'mmchattr', 'mmdeldisk', 'mmfsck', 'smb.snap.py', 'mmcesobjdepstoragepolicy', 'mmcheckquota', 'mmprodname', 'mmdelfs', 'mmcallhremote', 'mmgetstate', 'mmcesuserauthlsservice', 'mmcesnetup', 'mmremotecluster', 'tsstarthelper', 'mmcloudgateway', 'mmgetconfdata', 'tschpolicy', 'mmchmgr', 'mmcesnetchaddress', 'mmsmbvalidoptions', 'mmchfileset', 'mmwatch', 'tsprregister', 'mmstartpolicy', 'hadoop.snap.py', 'mmquotaoff', 'mmcesmonitor', 'mmquotaon', 'msgqueueservicesmonitormanager', 'mmlspool', 'mmlsmount', 'mmccrmonitor', 'mmbackup', 'mmlsnodeclass', 'lxtrace-4.14.0-115.14.1.el7a.ppc64le', 'mmrefresh', 'mmnfsrecovernode', 'mmpercentdecode', 'wftopichk', 'tspcachesnapdiff', 'mmdiag', 'mmlssnapshot', 'mmcesobjlsstoragepolicy', 'mmafmctl', 'mmstatdcallout', 'mmksh', 'sshscpwrap'] Path provided by --with-executables-search-path ['win32fe.exe', 'win32feutils.dll'] Checking for program /sw/sources/lsf-tools/2.0/summit/bin/mapnames...not found Checking for program /sw/summit/xalt/1.2.0/bin/mapnames...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/bin/mapnames...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/cmake-3.15.2-xit2o3iepxvqbyku77lwcugufilztu7t/bin/mapnames...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/bin/mapnames...not found Checking for program /sw/summit/forge/20.0.1/bin/mapnames...not found Checking for program /sw/summit/cuda/10.1.243/bin/mapnames...not found Checking for program /opt/ibm/spectrumcomputing/lsf/10.1.0.9/linux3.10-glibc2.17-ppc64le-csm/bin/mapnames...not found Checking for program /usr/bin/mapnames...not found Checking for program /usr/sbin/mapnames...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/darshan-runtime-3.1.7-cnvxicgf5j4ap64qi6v5gxp67hmrjz43/bin/mapnames...not found Checking for program /sw/sources/hpss/bin/mapnames...not found Checking for program /opt/ibm/spectrumcomputing/lsf/10.1.0.9/linux3.10-glibc2.17-ppc64le-csm/etc/mapnames...not found Checking for program /opt/ibm/csm/bin/mapnames...not found Checking for program /usr/local/bin/mapnames...not found Checking for program /usr/local/sbin/mapnames...not found Checking for program /opt/ibm/flightlog/bin/mapnames...not found Checking for program /opt/ibutils/bin/mapnames...not found Checking for program /opt/ibm/spectrum_mpi/jsm_pmix/bin/mapnames...not found Checking for program /opt/puppetlabs/bin/mapnames...not found Checking for program /usr/lpp/mmfs/bin/mapnames...not found Checking for program /ccs/home/adams/petsc_install/lib/petsc/bin/win32fe/mapnames...not found Unable to find programs ['mapnames'] providing listing of each search directory to help debug Path provided in Python program Path provided by default path ['bsub', 'bjob', 'showusage'] ['mpirun', 'ibrun', 'ibrun.symm', 'aprun', 'jsrun', 'ld', 'xalt_helper_functions.sh'] ['shmemrun', 'profile2mat.pl', 'oshrun', 'oshmem_info', 'orterun', 'orted', 'orte-server', 'orte-info', 'orte-clean', 'ompi_info', 'ompi-server', 'ompi-clean', 'mpitool', 'mpirun', 'mpijob', 'mpiexec', 'jumpshot', 'get_nl_setting', 'efix', 'alias.pl', 'aggregate_profile.pl', 'stock', 'shmemfort', 'shmemcxx', 'shmemcc', 'shmemc++', 'shmemCC', 'oshfort', 'oshcxx', 'oshcc', 'oshc++', 'oshCC', 'ortecc', 'opal_wrapper', 'mpixlf', 'mpixlc', 'mpixlC', 'mpipgifort', 'mpipgicc', 'mpipgic++', 'mpifort', 'mpif90', 'mpif77', 'mpicxx', 'mpicc', 'mpic++', 'mpiCC', 'mpip-jsrun'] ['ccmake', 'cmake', 'ctest', 'cpack'] ['localrc', 'pgaccelerror', 'pgimport', 'pgacclnk', 'pgaccelinfo', 'pgnvd', 'pgexplain.xml', 'pgunzip', 'pgzip', 'pgsize', 'pgipa', 'pgicg', 'pgextract', 'pgappend', 'pgprepro', 'pgcpuid', 'pgprofrc', 'pgprof', 'pgf901-llvm_ex', 'pgf901-llvm', 'pgf90-llvm_ex', 'pgf902-llvm', 'pggpp2ex-llvm', 'pggpp2-llvm', 'pggpp1-llvm', 'pggdecode', 'pgc-llvm_ex', 'pgc-llvm', 'pgfortran', 'pgf90', 'pgc++', 'pgcc18', 'pgcc11', 'pgcc', 'pgnvvm', 'makelocalrc', 'pgnvdlinpowerrc', 'pgnvd64rc', 'pgnvdrc', '.pgnvdrc', 'acclinuxpower64rc', 'acc1rc', 'versionrc', 'powerversionrc', 'c++llvmrc', 'pgllvmrc', 'llvmrc', 'linpoweriparc', 'noiparc', 'iparc', 'pgftnrc', 'pgf90linpowerrc', 'pgc++linpowerrc', 'pgcclinpowerrc', 'linpowerrc', 'powerrc', 'cpprc', 'ccrc', 'fnativerc', 'nativerc', '.pgfortranrc', '.pgf90rc', '.pgc++rc', '.pgcc18rc', '.pgcc11rc', '.pgccrc', 'siterc'] ['ddt-debugger-mps', 'ddt', 'ddt-debugger', 'allinea-client', 'ddt-mpirun', 'forge-probe', 'forge', 'make-profiler-libraries', 'ddt-debugger-ll', 'map', 'ddt-client'] ['cuobjdump', 'cuda-gdb', 'cuda-gdbserver', 'gpu-library-advisor', 'cuda-memcheck', 'nsight', 'nsight_ee_plugins_manage.sh', 'nv-nsight-cu-cli', 'bin2c', 'crt', 'cudafe++', 'fatbinary', 'nvcc', 'nvcc.profile', 'nvlink', 'ptxas', 'nvdisasm', 'nvprof', 'nvprune', 'computeprof', 'nvvp', 'cuda-install-samples-10.1.sh'] ['brsvjob', 'lspasswd', 'bmgroup', 'bpost', 'btop', 'bclusters', 'lsplace', 'bjdepinfo', 'lsreghost', 'brsvs', 'bparams', 'bgadd', 'lsrun', 'lsload', 'breconfig', 'lsfrestart', 'bconf', 'bmod', 'bsub', 'lsunlockhost', 'bmodify', 'bread', 'bacct', 'lsfrsv', 'lsgrun', 'bslots', 'bapp', 'bjobs', 'lsmail', 'lsfstartup', 'lsmake4', 'lslockhost', 'lsfshutdown', 'bpeek', 'lsrun.sh', 'lslogin', 'bimages', 'bchkpnt', 'bwait', 'lsfhadoop.sh', 'bsla', 'brsvmod', 'lsrtasks', 'blimits', 'busers', 'bresources', 'bqueues', 'brequeue', 'bmg', 'lsrcp', 'lseligible', 'lshosts', 'lsloadadj', 'breboot', 'lsacct', 'lsclusters', 'bugroup', 'lsltasks', 'lsadmin', 'bstatus', 'bgbroker', 'bgdel', 'bentags', 'lsportcheck', 'brsvsub', 'lsf-start-spark.sh', 'bqc', 'bhpart', 'lsf-spark-shell.sh', 'lsmakerm', 'lsf-spark-submit.sh', 'brestart', 'bswitch', 'bjgroup', 'lsreconfig', 'lammpirun_wrapper', 'lsf-stop-spark.sh', 'badmin', 'bbot', 'bstop', 'lsinfo', 'brun', 'bhist', 'bhosts', 'bgmod', 'brsvadd', 'bkill', 'brlainfo', 'brsvdel', 'xagent', 'bresize', 'bmig', 'lsmon', 'lsid', 'bgpinfo', 'lsmake', 'bresume', 'blaunch', 'lsacctmrg'] ['sview', 'strigger', 'sstat', 'sshare', 'srun', 'sreport', 'squeue', 'sprio', 'smap', 'sinfo', 'sgather', 'sdiag', 'scontrol', 'scancel', 'sbcast', 'sbatch', 'sattach', 'salloc', 'sacctmgr', 'sacct', 'qsub', 'tracejob', 'qterm', 'qstop', 'qstat', 'qstart', 'qsig', 'qselect', 'qrun', 'qrls', 'qrerun', 'qorder', 'qnodes', 'qmsg', 'qmove', 'qmgr', 'qhold', 'qgpureset', 'qgpumode', 'qenable', 'qdisable', 'qdel', 'qchkpt', 'qalter', 'printtracking', 'printserverdb', 'printjob', 'pbsnodes', 'pbsdsh', 'pbs_track', 'nqs2pbs', 'hostn', 'chk_tree', 'jobsub', 'jobstat', 'ctags', 'diffstat', 'rpmsign', 'swig', 'ccache-swig', 'ocs', 'cscope-indexer', 'cscope', 'doxygen', 'unwrapdiff', 'splitdiff', 'rediff', 'recountdiff', 'lsdiff', 'interdiff', 'grepdiff', 'flipdiff', 'fixcvsdiff', 'filterdiff', 'espdiff', 'editdiff', 'dehtmldiff', 'combinediff', 'yacc', 'byacc', 'indent', 'rlog', 'rcsmerge', 'rcsfreeze', 'rcsdiff', 'rcsclean', 'rcs', 'merge', 'ident', 'co', 'ci', 'svnversion', 'svnsync', 'svnserve', 'svnrdump', 'svnlook', 'svndumpfilter', 'svnadmin', 'svn', 'intltoolize', 'intltool-update', 'intltool-prepare', 'intltool-merge', 'intltool-extract', 'gettextize', 'autopoint', 'stap-report', 'stapsh', 'staprun', 'stap-merge', 'stap-prep', 'stap', 'screen', 'rhn_register', 'whiptail', 'subscription-manager', 'rhsmcertd', 'rhsm-debug', 'rct', 'consolehelper', 'pyinotify', 'easy_install-2.7', 'easy_install', 'snmpwalk', 'snmpvacm', 'snmpusm', 'snmptrap', 'snmptranslate', 'snmptls', 'snmptest', 'snmptable', 'snmpstatus', 'snmpset', 'snmpnetstat', 'snmpinform', 'snmpgetnext', 'snmpget', 'snmpdf', 'snmpdelta', 'snmpbulkwalk', 'snmpbulkget', 'encode_keychange', 'chardetect', 'atopsar', 'atopd', 'atopconvert', 'atop', 'abrt-dump-oops', 'abrt-action-save-kernel-data', 'abrt-action-analyze-oops', 'abrt-action-trim-files', 'abrt-action-perform-ccpp-analysis', 'abrt-action-list-dsos', 'abrt-action-install-debuginfo', 'abrt-action-generate-core-backtrace', 'abrt-action-generate-backtrace', 'abrt-action-analyze-vulnerability', 'abrt-action-analyze-core', 'abrt-action-analyze-ccpp-local', 'abrt-action-analyze-c', 'abrt-action-analyze-backtrace', 'abrt-watch-log', 'abrt-handle-upload', 'abrt-action-save-package-data', 'abrt-action-notify', 'abrt-action-analyze-xorg', 'reporter-ureport', 'reporter-rhtsupport', 'libtar', 'satyr', 'orig', 'git', 'git-receive-pack', 'git-upload-archive', 'git-upload-pack', 'git-shell', 'lex', 'tset', 'pk12util', 'as', 'lpr.cups', 'speaker-test', 'manpath', 'hwloc-gather-topology', 'hwloc-calc', 'rev', 'snmpconf', 'sctp_darn', 'trust', 'nm', 'fc-pattern', 'ucs2any', 'zforce', 'groups', 'gunzip', 'tracepath', 'rdma_xclient', 'unalias', 'db_upgrade', 'dbus-uuidgen', 'uuidgen', 'uname', 'df', 'fc-match', 'evim', 'schemagen', 'sessreg', 'rdoc', 'gdbus-codegen', 'perl', 'perl5.16.3', 'egrep', 'mlxcables', 'recode-sr-latin', 'pkcheck', 'GET', 'rvim', 'addr2line', 'gsdj500', 'rpmbuild', 'amixer', 'unexpand', 'ypchsh', 'yppasswd', 'ypchfn', 'install', 'cancel.cups', 'msggrep', 'mwm', 'gcc-nm', 'remunge', 'ibgenperm', 'thumbpdf', 'nsenter', 'clean-binary-files', 'httpcfg', 'mlnx_dump_parser', 'ghci', 'autoexpect', 'ntpstat', 'texluac', 'dtestsrq', 'lz4cat', 'pkttyagent', 'python2', 'pkla-admin-identities', 'hpc', 'tail', 'size', 'fc-query', 'mkluatexfontdb', 'dbus-cleanup-sockets', 'nisdomainname', 'ldapurl', 'xsd', 'startx', 'crash', 'mcdiff', 'make', 'gslp', 'mktexfmt', 'pmafm', 'xdg-desktop-icon', 'ldappasswd', 'csh', 'printenv', 'vncconfig', 'wqdump_ext', 'gendiff', 'mst_cable', 'X', 'mstvpd', 'zmore', 'db_hotbackup', 'signver', 'systemctl', 'amsvis', 'tbl', 'xmessage', 'servertool', 'sn', 'embedspu', 'rview', 'nohup', 'grops', 'geoipupdate', 'xfd', 'rm', 'infotocap', 'pwscore', 'eu-objdump', 'mysql', 'mailq.postfix', 'ptx', 'systemd-loginctl', 'mstop', 'rxe_cfg', 'ar', 'ccrewrite', 'diff-jars', 'python', 'pmsocks', 'migspeed', 'xmbind', 'objcopy', 'alias', 'dos2unix', 'ca-legacy', 'tclsh', 'ofed_rpm_info', 'hwloc-assembler-remote', 'vimtutor', 'lprm', 'pygtk-demo', 'jjs', 'prtstat', 'seq', 'col', 'pdcp', 'eu-strip', 'ib_acme', 'resourcedump', 'dirname', 'fc-cache-64', 'lesskey', 'date', 'basename', 'grep', 'geoiplookup6', 'ssh-copy-id', 'xterm', 'svcutil', 'libpng-config', 'dvilualatex', 'db_load', 'systemd-notify', 'dracut', 'texconfig', 'haddock', 'xrandr', 'umount', 'xdg-mime', 'prlimit', 'ucx_info', 'infokey', 'pstree.x11', 'mono-test-install', 'write', 'geqn', 'xdg-screensaver', 'glib-mkenums', 'sudoedit', 'mst', 'ghc-pkg-7.6.3', 'wall', 'dgawk', 'ibv_polldcinfo', 'ppc64le-redhat-linux-gcc', 'gcc', 'xzcat', 'simpdftex', 'cvsbug', 'pdflatex', 'mlxburn', 'ping', 'column', 'fc-cache', 'pinentry-curses', 'pmlogextract', 'scp', 'stdbuf', 'mlxcables_ext', 'renice', 'file', 'raw_ethernet_bw', 'msguniq', 'appletviewer', 'pdf2dsc', 'mlxpci', 'dig', 'gem', 'coredumpctl', 'eu-size', 'conjure', 'mlnx_conf_mgr.sh', 'alsaunmute', 'command', 'cd', 'sha1sum', 'xsltproc', 'hp2ps', 'erb', 'update-desktop-database', 'gtk-update-icon-cache', 'crontab', 'icewm', 'mktexmf', 'whoami', 'ttmkfdir', 'uxterm', 'ucx_perftest', 'ibcongest', 'mlnx_perf', 'funzip', 'ghc', 'pkg-config', 'nvidia-persistenced', 'unzipsfx', 'bootctl', 'fc-conflist', 'pango-querymodules-64', 'splain', 'curl', 'arch', 'xinit', 'pfbtopfa', 'mozroots', 'setsid', 'setterm', 'gr2fonttest', 'wqdump', 'gzexe', 'gtk-launch', 'compare', 'aseqdump', 'cc', 'nvidia-debugdump', 'icesh', 'udevadm', 'lc', 'icehelp', 'gvimdiff', 'taskset', 'xml2-config', 'pkill', 'bzmore', 'mogrify', 'systemd-analyze', 'mkdir', 'lpq.cups', 'libpng15-config', 'mc', 'repstopdf', 'ld', 'ld.bfd', 'systemd-sysv-convert', 'nproc', 'dbpmda', 'cksum', 'psed', 's2p', 'msghack', 'tabs', 'systemd-coredumpctl', 'jmap', 'libtoolize', 'etags.emacs', 'gtester', 'pmie', 'fg', 'ps2pdfwr', 'peekfd', 'ib_atomic_bw', 'preconv', 'dtestx', 'aria_dump_log', 'gpg-error', 'pmtrace', 'allec', 'post-grohtml', 'tree', 'net-snmp-create-v3-user', 'bunzip2', 'zcat', 'xzless', 'lscpu', 'xzmore', 'udaddy', 'alsamixer', 'find2perl', 'dtestcm', 'iconv', 'rpm2cpio', 'desktop-file-edit', 'ps2pdf13', 'ldapexop', 'hwloc-assembler', 'rpmquery', 'ibv_umr', 'chown', 'pdsh', 'gcc-ar', 'pdb2mdb', 'unshare', 'db_replicate', 'nsupdate', 'cpio', 'xmvn-builddep', 'comm', 'dbus-monitor', 'automake-1.13', 'automake', 'eu-stack', 'runghc-7.6.3', 'xgettext', 'chsh', 'eqn', 'gdb', 'lualatex', 'cpupower', 'build-jar-repository', 'gacutil2', 'gawk', 'rftp', 'kpsewhere', 'c99', 'nvidia-smi', 'reset', 'xdg-open', 'zip', 'split', 'mlx_fpga_ext', 'catchsegv', 'ghc-7.6.3', 'keytool', 'aria_chk', 'mlxreg', 'mstregdump', 'alsaucm', 'mlxlink', 'rename', 'chktrust', 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'dump_fts', 'errinjct', 'hardlink', 'matchpathcon', 'fdformat', 'vgextend', 'fsfreeze', 'ofpathname', 'pwck', 'dhclient', 'postdrop', 'sendmail.postfix', 'vgcfgbackup', 'sulogin', 'hack-coff', 'lpc.cups', 'xfs_info', 'ypbind', 'nameif', 'nstat', 'mkfs.cramfs', 'sim_server', 'activate_firmware', 'nfsstat', 'opensm', 'gssproxy', 'ibaddr', 'mkfs.xfs', 'groupadd', 'halt', 'osmtest', 'lvmpolld', 'lsmcode', 'pvs', 'lvremove', 'start-statd', 'debugfs', 'setpci', 'selinuxexeccon', 'ibportstate', 'rtmon', 'ibcheckerrors', 'vgimportclone', 'e2label', 'tune2fs', 'rtas_dump', 'postfix', 'lnstat', 'dump_mfts.sh', 'thin_restore', 'check_lft_balance.pl', 'ibidsverify.pl', 'cma_roce_tos', 'selabel_lookup', 'ip6tables-save', 'rmmod', 'cache_metadata_size', 'nsm', 'run_srp_daemon', 'runuser', 'xfs_metadump', 'getcap', 'sefcontext_compile', 'ip', 'iptables', 'glibc_post_upgrade.ppc64le', 'fsadm', 'iblinkinfo.pl', 'ibqueryerrors.pl', 'setfiles', 'sys_ident', 'dhclient-script', 'tracepath6', 'findfs', 'getsebool', 'cbq', 'e2image', 'blkdiscard', 'uuserver', 'ifcfg', 'shutdown', 'smtp-source', 'install-info', 'set_nodedesc.sh', 'xfs_repair', 'rsyslogd', 'rpcdebug', 'lvm', 'mkhomedir_helper', 'pvscan', 'logsave', 'pwconv', 'unsquashfs', 'ntp-keygen', 'e2undo', 'blkmapd', 'vgscan', 'osd_login', 'umount.nfs', 'ibcheckerrs', 'rpc.nfsd', 'iblinkinfo', 'ibtracert', 'cfdisk', 'common_irq_affinity.sh', 'modinfo', 'sasldblistusers2', 'rtpr', 'selinuxconlist', 'wrapper', 'blkid', 'ibclearerrors', 'lvmconf', 'xqmstats', 'vgsplit', 'postsuper', 'thin_check', 'filefrag', 'adduser', 'redhat_lsb_trigger.ppc64le', 'dump_lfts.sh', 'drmgr', 'cache_check', 'crond', 'pvchange', 'vendstat', 'setenforce', 'addgnupghome', 'tcpdmatch', 'reboot', 'vipw', 'rpc.gssd', 'cracklib-format', 'perfquery', 'sln', 'pivot_root', 'create-cracklib-dict', 'quotaon', 'groupdel', 'ptp4l', 'mkfs', 'xfs_estimate', 'dmeventd', 'gss-server', 'usernetctl', 'show_counters', 'xfs_ncheck', 'vgchange', 'grpunconv', 'quotastats', 'iptunnel', 'dkms', 'resizepart', 'sysctl_perf_tuning', 'xfs_mkfile', 'repquota', 'ip6tables-restore', 'lusermod', 'wipefs', 'sshd', 'ifdown', 'cache_restore', 'arp', 'pvremove', 'clock', 'tickadj', 'ldconfig', 'selinuxdefcon', 'lvreduce', 'vigr', 'quot', 'vgdisplay', 'lchage', 'arping', 'ibacm', 'ibcheckportstate', 'smparquery', 'insmod', 'addnote', 'lvmetad', 'ibprintca.pl', 'switch_root', 'hwclock', 'kpartx', 'ifstat', 'sysinfo-snapshot.py', 'setsebool', 'edquota', 'killall5', 'pidof', 'anacron', 'service', 'sfdisk', 'vgimport', 'vgrename', 'sm-notify', 'lvmdiskscan', 'lvscan', 'selinuxenabled', 'nologin', 'atd', 'accessdb', 'ibcheckstate', 'userdel', 'lsvio', 'ibnodes', 'weak-modules', 'quotaoff', 'setquota', 'era_invalidate', 'automount', 'xfs_copy', 'sosreport', 'consoletype', 'phc_ctl', 'safe_finger', 'ppc64_cpu', 'mlnx_eswitch_set', 'uesensor', 'rpc.mountd', 'ls-vscsi', 'ibsysstat', 'modprobe', 'ibstatus', 'lgroupadd', 'vgs', 'rtacct', 'pdata_tools', 'telinit', 'setup_mr_cache.sh', 'poweroff', 'lsof', 'slattach', 'visudo', 'ibcheckportwidth', 'update-pciids', 'nscd', 'update_flash', 'smtp-sink', 'mkswap', 'sushell', 'lvmconfig', 'mktree', 'xfs_admin', 'ctstat', 'lvrename', 'ibmirror', 'pam_tally2', 'chkconfig', 'pam_console_apply', 'xfs_io', 'ib2ib_setup', 'nfsdcltrack', 'mksquashfs', 'umount.nfs4', 'arpd', 'rtas_ibm_get_vpd', 'setcap', 'rtas_dbg', 'chroot', 'ibqueryerrors', 'grubby', 'timemaster', 'ibchecknet', 'installkernel', 'vgmerge', 'rpc.idmapd', 'create-munge-key', 'routef', 'mount.nfs', 'pvmove', 'ip6tables', 'postmulti', 'ibnetdiscover', 'key.dns_resolver', 'request-key', 'alsabat-test.sh', 'genhostid', 'ibswportwatch.pl', 'postmap', 'init', 'ibprintswitch.pl', 'ether-wake', 'ifenslave', 'selinux_restorecon', 'fstrim', 'xfs_fsr', 'packer', 'lgroupdel', 'vgcreate', 'mount.nfs4', 'ethtool', 'fsck.cramfs', 'postalias', 'lvextend', 'vgconvert', 'saslpasswd2', 'netreport', 'mkfs.minix', 'cma_roce_mode', 'ibcheckwidth', 'thin_metadata_size', 'faillock', 'thin_rmap', 'ibcheckport', 'pvck', 'postkick', 'ibrouters', 'pvcreate', 'tcpd', 'vgck', 'rpcbind', 'ping6', 'opal-prd', 'thin_delta', 'mii-tool', 'showmount', 'ibccquery', 'devlink', 'set_irq_affinity.sh', 'ibping', 'nfsiostat', 'mlnx_tune', 'hvcsadmin', 'unix_chkpwd', 'getenforce', 'luseradd', 'set_poweron_time', 'semodule', 'convertquota', 'applygnupgdefaults', 'fuser', 'ibccconfig', 'compat_gid_gen'] ['darshan-mk-log-dirs.pl', 'darshan-gen-cc.pl', 'darshan-gen-cxx.pl', 'darshan-gen-fortran.pl', 'darshan-config'] ['htar', '5.0.2.9', '6.0.0.11', '5.0.2.11', 'hsi', '6.2.0.1', 'TA_Status', 'test_TA'] ['esub', 'esub.poe', 'pim', 'lsf_daemons', 'rla', 'elim.jsdl', 'named', 'esub.tv', 'esub.openmp', 'esub.mvapich', 'esub.dprov', 'sbatchd', 'esub.bproc', 'esub.openmpi', 'esub.oldtvpoe', 'esub.mpichp4', 'elim.frequency', 'esub.tvlammpi', 'esub.oldpoe', 'lim', 'esub.ls_dyna', 'esub.tvmpich_gm', 'esub.fluent', 'nios', 'esub.gold', 'esub.mpich_gm', 'esub.pvm', 'esub.intelmpi', 'esub.mpich_mx', 'eauth.krb5', 'res', 'tmp.elim.sa', 'eauth', 'esub.tvpoe', 'mesub', 'esub.mpich2', 'melim', 'esub.lammpi'] ['csm_bb_vg_create', 'csm_node_find_job', 'csm_cluster_query_state', 'csm_allocation_create', 'csm_ib_cable_update', 'csm_allocation_query_active_all', 'csm_bb_lv_delete', 'csm_allocation_update_state', 'csm_switch_attributes_update', 'csm_soft_failure_recovery', 'csm_diag_run_query', 'csm_allocation_step_begin', 'csm_bb_vg_delete', 'csm_node_attributes_query_history', 'csm_allocation_query_details', 'csm_node_attributes_query_details', 'csm_diag_run_query_details', 'csm_ras_event_create', 'csm_diag_run_begin', 'csm_node_resources_query_all', 'csm_allocation_query', 'csm_ras_event_query_allocation', 'csm_switch_attributes_query', 'csm_node_attributes_query', 'csm_switch_attributes_query_details', 'csm_infrastructure_health_check', 'csm_node_attributes_update', 'csm_ras_msg_type_create', 'csm_ras_msg_type_delete', 'csm_ras_msg_type_query', 'csm_node_query_state_history', 'csm_switch_attributes_query_history', 'csm_allocation_step_query_active_all', 'csm_bb_lv_create', 'csm_node_resources_query', 'csm_allocation_delete', 'csm_ras_event_query', 'csm_allocation_resources_query', 'csm_diag_result_create', 'csm_node_delete', 'csm_ras_msg_type_update', 'csm_bb_vg_query', 'csm_ib_cable_query_history', 'csm_diag_run_end', 'csm_allocation_step_query', 'csm_allocation_step_query_details', 'csm_allocation_update_history', 'csm_allocation_step_end', 'csm_ib_cable_query', 'csm_jsrun_cmd', 'csm_bb_lv_query'] [] [] ['decoder'] ['ibmsquit', 'ibis', 'dump2slvl.pl', 'ibdiagpath', 'IBMgtSim', 'dump2psl.pl', 'ibdmchk', 'mkSimNodeDir', 'ibdiagui', 'ibdiagnet', 'RunSimTest', 'ibdmtr', 'ibtopodiff', 'ibdmsh', 'ibnlparse', 'ibmssh'] ['jsrun', 'jswait', 'jskill', 'query_env', 'export_slurm_env', 'jsm_simulator', 'js_task_info', 'admin', 'jsproxy', 'jslist', 'export_smpi_env', 'jsm', 'stock'] ['hiera', 'facter', 'puppet', 'facter-ng.bat'] ['mmtrace', 'mmsysmon.py', 'mmnfsfuncs', 'mmcesnfsmonitor', 'mmjob', 'mmdelcallback', 'tsdf', 'tschfileset', 'tslsdisk', 'tslspolicy', 'tslsfs', 'tsdelsnapshot', 'tslsfileset', 'tsnsdaccess', 'tscrsnapshot', 'tslspool', 'tssnapdir', 'tsedquota', 'tsusercmd', 'tslssnapshot', 'tsstatus', 'mmcrnsd', 'tsgetscsiinfo', 'mmqosnice', 'mmsetquota', 'mmdelfileset', 'tsprpreemptabort', 'cleanupkeystonedb', 'mmsdrfsdef.Linux', 'mmcesuserauthcrservice', 'mmdumpfilocks', 'tschdisk', 'tsaddpdisk', 'tsctl', 'tskafkaauth', 'tsdbfs', 'tscheckquota', 'tsfsctl', 'tsrpldisk', 'tschpdisk', 'tsrecgroupserver', 'tscmd', 'tsreclaimspace', 'tscrrecgroup', 'tschstoragepool', 'tsrestripefs', 'tsdefragfs', 'tsfileid', 'tsdsh', 'tsdeldisk', 'tsquotaon', 'tschfs', 'tsdefedquota', 'tsunmount', 'tsdelpdisk', 'tsressnapshot', 'tscrvdisk', 'tsquotaoff', 'tsexpelnode', 'tslsvdisk', 'tscrfs', 'tschmgr', 'tslsrecgroup', 'tslsrecoverygroupevents', 'tsdelvdisk', 'tsnsddiscover', 'tsdefquotaoff', 'tscrfileset', 'tsdelfs', 'tsdbvdisk', 'tsdelfileset', 'tsadddisk', 'tscachectl', 'tsdefquotaon', 'tschcarrier', 'tsauth', 'tslsqos', 'tslspdisk', 'tsnsdrediscover', 'tsremount', 'tsdelrecgroup', 'tschpool', 'tsrepquota', 'tschqos', 'tschrecgroup', 'tsfsck', 'tsdiag', 'tssbrff', 'mmlsfileset', 'mmexectsmcmd', 'mmgetkafkaspecinfo', 'mmfs', 'mmchconfig', 'ces.snap.py', 'mmperfmon', 'tsgetacl', 'clstrwatchcallbacks', 'mmcessmblsconfig', 'tslsattr', 'mmcesmonitord', '.links', 'mmnfsgrace', 'mmhelp-apolicy', 'mmpmon', 'mmcesnfsdelexport', 'mmchpolicy', 'gui.snap.py', 'tspcache', 'perfmon.snap.py', 'mmsdrquerydef', 'mmlsqos', 'mmxargs', 'tschattr', 'mmclidecode', 'clstrwatchconsumermanager', 'mmfsctl', 'mmpsnap', 'mmccrnv', 'perf.snap.py', 'mmcespnfsip', 'mmnfsnodeback', 'tsimgrestore', 'mmcesuserauthckservice', 'mmchnodeclass', 'pymmcesnfslsexport.py', 'mmdelacl', 'mmumount', 'mmcrnodeclass', 'mmsysmonc', 'tspcacheevict', 'mmexecvfile', 'sshwrap', 'mmgetifconf', 'mmfs-ppc64-rh4', 'sysmon.snap.py', 'mmimgrestore', 'mmcesobjaccesslinkfset', 'mmchecksubsys', 'mmcesop', 'tspmon', 'mmdefedquota', 'mmdelsnapshot', 'mmreclaimspace', 'mmsysmoncontrol', 'tsspectrumdiscover', 'mmyfields', 'mmchnode', 'mmrestorefs', 'mmcallhome', 'mmexportfs', 'mmcesnfsloadexport', 'tslspool34', 'mmnfsmonitor', 'mmsnmpagentd30', 'tsfindinode', 'mmfsfuncs.Linux', 'mmdumpperfdata', 'mmcesobjcrbase', 'mmdsh', 'objmetric_count.py', 'mmauditmount', 'mmcessmblsexport', 'mmdevdiscover', 'mmlsnode', 'mmautoload', 'mmcesnfscrexport', 'mmchnsd', 'mmfileid', 'mmcesnfsfuncs', 'mmcesrecovernode', 'mmlsfs', 'mmcollectdebugdata', 'tseditacl', 'tsbuhelper', 'tslinkfileset', 'tspreparedisk', 'mmrpldisk', 'mmdelnode', 'mmceslog', 'mmcrfsc', 'mmcesblockfuncs', 'mmgensymtable', 'mmfsd', 'mmnfsinstall', 'mmdspmsg', 'mmclone', 'mmchfs', 'mmlsdisk', 'mmnfstakeover', 'tsyselect', 'mmnfsup', 'mmcessmbcrexport', 'tsaddrmap', 'mmnetverify', 'mmchpool', 'msgqueue.snap.py', 'mmcesobjlscfg', 'tsrestorefileset', 'mmbuildgpl', 'mmsmbman', 'tsfindname', 'mmcesloadmonitor', 'mmcesobjaccess', 'mmaddcallback', 'mmcesobjpolicyfuncs', 'mmcessmbdelexport', 'msgqueueDaemonManager', 'core.snap.py', 'tsgskkm', 'mmauth', 'mmedquota', 'mmshutdown', 'tsdbmemleakparse', 'mmadquery', 'mmsdrcli', 'mmccr', 'mmcesobjchstoragepolicy', 'mmcesnfschcfg', 'tswatchmonitor', 'mmmigratefs', 'mmputacl', 'mmlscluster', 'commonsnap.py', 'mmcesservice', 'mmadddisk', 'tslsmgr', 'tssbrindex', 'mmafmlocal', 'mmlsperfdata', 'mmnfsuninstall', 'mmcmi', 'mmcesobjs3', 'tspcachescan', 'kdump-4.14.0-115.14.1.el7a.ppc64le', 'mmlsnsd', 'mmchcluster', 'mmunmount', 'mmnfsquorumloss', 'mmcesnetdeladdress', 'mmlsquota', 'mmces', 'pymmcesnfsfuncs.py', 'tsputacl', 'mmchqos', 'tsprshowfence', 'gpfsrunlevel', 'mmimgbackup', 'mmsdrrestore', 'tsqosnice', 'mmsdrserv', 'mmmsgqueue', 'mmcesmmcdelexport', 'mmlinkfileset', 'mmrestoreconfig', 'mmdelnodeclass', 'mmsmbfuncs', 'mmcesobjcfgman', 'mmfixcfg', 'mmcesnfslsexport', 'tsdbmemleak', 'mmaudit', 'mmcesnfslscfg', 'mmsmbsupportedoptions', 'mmafmconfig', 'mmlscallback', 'mmlsmgr', 'tsbackup', 'mmcesminfuncs', 'mmfsmount', 'mmcesmmcchexport', 'tsrestripefile', 'kdump', 'mmimportfs', 'mmcesobjcrring', 'mmnfs', 'mmcommon', 'mmcesnetmvaddress', 'mmsnmpagentd', 'mmcesobjfuncs', 'gui.callhome.py', 'tsbackup33', 'lxtrace', 'mmsdrfsdef', 'mmsmb', 'mmobj', 'tsprclear', 'mmceshdfsfuncs', 'mmcesnetworkmonitor', 'tspcacheutil', 'mmqos', 'mmlspolicy', 'mmrestripefs', 'mmcessmbfuncs', 'mmaddnode', 'mmblock', 'mmcrfs', 'mmmount', 'tsprreadres', 'mmnsddiscover', 'mmprotocoltrace', 'mmglobfuncs', 'tsprreadkeys', 'mmnfsdown', 'gpfs.snap', 'object.snap.py', 'mmcesnetaddaddress', 'mmcesobjchcfg', 'mmrsh', 'mmcesobjmr', 'mmeditacl', 'auditConsumerManager', 'mmlsconfig', 'mmsync', 'mmgetacl', 'mmcesuserauthrmservice', 'mmhealth', 'tsdelacl', 'mmremote', 'mmpercentencode', 'mmcloudfuncs', 'daemonize', 'mmcesnfschexport', 'tsclone', 'callhome.snap.py', 'clstrwatchreplaymanager', 'tsnetverify', 'mmstartup', 'mmcachectl', 'mmgskkm', 'mmdefragfs', 'mmsnapdir', 'tsapolicy', 'mmrcmd', 'mmexpelnode', 'mmsdrquery', 'ece.callhome.py', 'mmchdisk', 'mmcesnetdown', 'mmlslicense', 'mmrestripefile', 'mmcrfileset', 'mmnfscleanup', 'mmlogmsg', 'mmcessmbexportacl', 'mmchlicense', 'mmsetrcmd', 'tsclwatchrules', 'mmdynamicmap', 'tssetquota', 'tsprreserve', 'wftopics', 'mmvaryonvg', 'mmsnmpagentd10', 'mmbackupconfig', 'mmdefquotaon', 'mmlsattr', 'mmcesfuncs', 'mmfsadm', 'mmcesmmccrexport', 'runmmfs', 'mmafmcmd', 'ccrrestore', 'mmunlinkfileset', 'basicsnap.py', 'mmafmhomeconfig', 'auth.snap.py', 'fab3.snap.py', 'mmuserauth', 'object.callhome.py', 'mmlogsort', 'mmdf', 'mmcesobjcrstoragepolicy', 'mmdefquotaoff', 'mmtracectl', 'mmdump', 'tsprquery', 'mmfsenv', 'mmfsfuncs', 'mmrepquota', 'mmcesdr', 'mmcesnode', 'tslsquota', 'mmdsm', 'mmdelnsd', 'mmnfsinit', 'mmcrsnapshot', 'mmlockf', 'mmcesauthfuncs', 'network.callhome.py', 'mmglobfuncs.Linux', 'tsprinquiry', 'nfs.snap.py', 'mmcesnetlsaddress', 'mmapplypolicy', 'mmdumpkthreads', 'tswatchgpfsconduit', 'mmcessmbchconfig', 'perfmon.callhome.py', 'mmauditpreunmount', 'mmrcp', 'scpwrap', 'mmremotefs', 'tsunlinkfileset', 'mmcrcluster', 'mmnfspreunmount', 'mmcessmbchexport', 'tsauditconsumer', 'mmchattr', 'mmdeldisk', 'mmfsck', 'smb.snap.py', 'mmcesobjdepstoragepolicy', 'mmcheckquota', 'mmprodname', 'mmdelfs', 'mmcallhremote', 'mmgetstate', 'mmcesuserauthlsservice', 'mmcesnetup', 'mmremotecluster', 'tsstarthelper', 'mmcloudgateway', 'mmgetconfdata', 'tschpolicy', 'mmchmgr', 'mmcesnetchaddress', 'mmsmbvalidoptions', 'mmchfileset', 'mmwatch', 'tsprregister', 'mmstartpolicy', 'hadoop.snap.py', 'mmquotaoff', 'mmcesmonitor', 'mmquotaon', 'msgqueueservicesmonitormanager', 'mmlspool', 'mmlsmount', 'mmccrmonitor', 'mmbackup', 'mmlsnodeclass', 'lxtrace-4.14.0-115.14.1.el7a.ppc64le', 'mmrefresh', 'mmnfsrecovernode', 'mmpercentdecode', 'wftopichk', 'tspcachesnapdiff', 'mmdiag', 'mmlssnapshot', 'mmcesobjlsstoragepolicy', 'mmafmctl', 'mmstatdcallout', 'mmksh', 'sshscpwrap'] Path provided by --with-executables-search-path ['win32fe.exe', 'win32feutils.dll'] Checking for program /sw/sources/lsf-tools/2.0/summit/bin/bib2html...not found Checking for program /sw/summit/xalt/1.2.0/bin/bib2html...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/bin/bib2html...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/cmake-3.15.2-xit2o3iepxvqbyku77lwcugufilztu7t/bin/bib2html...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/bin/bib2html...not found Checking for program /sw/summit/forge/20.0.1/bin/bib2html...not found Checking for program /sw/summit/cuda/10.1.243/bin/bib2html...not found Checking for program /opt/ibm/spectrumcomputing/lsf/10.1.0.9/linux3.10-glibc2.17-ppc64le-csm/bin/bib2html...not found Checking for program /usr/bin/bib2html...not found Checking for program /usr/sbin/bib2html...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/darshan-runtime-3.1.7-cnvxicgf5j4ap64qi6v5gxp67hmrjz43/bin/bib2html...not found Checking for program /sw/sources/hpss/bin/bib2html...not found Checking for program /opt/ibm/spectrumcomputing/lsf/10.1.0.9/linux3.10-glibc2.17-ppc64le-csm/etc/bib2html...not found Checking for program /opt/ibm/csm/bin/bib2html...not found Checking for program /usr/local/bin/bib2html...not found Checking for program /usr/local/sbin/bib2html...not found Checking for program /opt/ibm/flightlog/bin/bib2html...not found Checking for program /opt/ibutils/bin/bib2html...not found Checking for program /opt/ibm/spectrum_mpi/jsm_pmix/bin/bib2html...not found Checking for program /opt/puppetlabs/bin/bib2html...not found Checking for program /usr/lpp/mmfs/bin/bib2html...not found Checking for program /ccs/home/adams/petsc_install/lib/petsc/bin/win32fe/bib2html...not found Unable to find programs ['bib2html'] providing listing of each search directory to help debug Path provided in Python program Path provided by default path ['bsub', 'bjob', 'showusage'] ['mpirun', 'ibrun', 'ibrun.symm', 'aprun', 'jsrun', 'ld', 'xalt_helper_functions.sh'] ['shmemrun', 'profile2mat.pl', 'oshrun', 'oshmem_info', 'orterun', 'orted', 'orte-server', 'orte-info', 'orte-clean', 'ompi_info', 'ompi-server', 'ompi-clean', 'mpitool', 'mpirun', 'mpijob', 'mpiexec', 'jumpshot', 'get_nl_setting', 'efix', 'alias.pl', 'aggregate_profile.pl', 'stock', 'shmemfort', 'shmemcxx', 'shmemcc', 'shmemc++', 'shmemCC', 'oshfort', 'oshcxx', 'oshcc', 'oshc++', 'oshCC', 'ortecc', 'opal_wrapper', 'mpixlf', 'mpixlc', 'mpixlC', 'mpipgifort', 'mpipgicc', 'mpipgic++', 'mpifort', 'mpif90', 'mpif77', 'mpicxx', 'mpicc', 'mpic++', 'mpiCC', 'mpip-jsrun'] ['ccmake', 'cmake', 'ctest', 'cpack'] ['localrc', 'pgaccelerror', 'pgimport', 'pgacclnk', 'pgaccelinfo', 'pgnvd', 'pgexplain.xml', 'pgunzip', 'pgzip', 'pgsize', 'pgipa', 'pgicg', 'pgextract', 'pgappend', 'pgprepro', 'pgcpuid', 'pgprofrc', 'pgprof', 'pgf901-llvm_ex', 'pgf901-llvm', 'pgf90-llvm_ex', 'pgf902-llvm', 'pggpp2ex-llvm', 'pggpp2-llvm', 'pggpp1-llvm', 'pggdecode', 'pgc-llvm_ex', 'pgc-llvm', 'pgfortran', 'pgf90', 'pgc++', 'pgcc18', 'pgcc11', 'pgcc', 'pgnvvm', 'makelocalrc', 'pgnvdlinpowerrc', 'pgnvd64rc', 'pgnvdrc', '.pgnvdrc', 'acclinuxpower64rc', 'acc1rc', 'versionrc', 'powerversionrc', 'c++llvmrc', 'pgllvmrc', 'llvmrc', 'linpoweriparc', 'noiparc', 'iparc', 'pgftnrc', 'pgf90linpowerrc', 'pgc++linpowerrc', 'pgcclinpowerrc', 'linpowerrc', 'powerrc', 'cpprc', 'ccrc', 'fnativerc', 'nativerc', '.pgfortranrc', '.pgf90rc', '.pgc++rc', '.pgcc18rc', '.pgcc11rc', '.pgccrc', 'siterc'] ['ddt-debugger-mps', 'ddt', 'ddt-debugger', 'allinea-client', 'ddt-mpirun', 'forge-probe', 'forge', 'make-profiler-libraries', 'ddt-debugger-ll', 'map', 'ddt-client'] ['cuobjdump', 'cuda-gdb', 'cuda-gdbserver', 'gpu-library-advisor', 'cuda-memcheck', 'nsight', 'nsight_ee_plugins_manage.sh', 'nv-nsight-cu-cli', 'bin2c', 'crt', 'cudafe++', 'fatbinary', 'nvcc', 'nvcc.profile', 'nvlink', 'ptxas', 'nvdisasm', 'nvprof', 'nvprune', 'computeprof', 'nvvp', 'cuda-install-samples-10.1.sh'] ['brsvjob', 'lspasswd', 'bmgroup', 'bpost', 'btop', 'bclusters', 'lsplace', 'bjdepinfo', 'lsreghost', 'brsvs', 'bparams', 'bgadd', 'lsrun', 'lsload', 'breconfig', 'lsfrestart', 'bconf', 'bmod', 'bsub', 'lsunlockhost', 'bmodify', 'bread', 'bacct', 'lsfrsv', 'lsgrun', 'bslots', 'bapp', 'bjobs', 'lsmail', 'lsfstartup', 'lsmake4', 'lslockhost', 'lsfshutdown', 'bpeek', 'lsrun.sh', 'lslogin', 'bimages', 'bchkpnt', 'bwait', 'lsfhadoop.sh', 'bsla', 'brsvmod', 'lsrtasks', 'blimits', 'busers', 'bresources', 'bqueues', 'brequeue', 'bmg', 'lsrcp', 'lseligible', 'lshosts', 'lsloadadj', 'breboot', 'lsacct', 'lsclusters', 'bugroup', 'lsltasks', 'lsadmin', 'bstatus', 'bgbroker', 'bgdel', 'bentags', 'lsportcheck', 'brsvsub', 'lsf-start-spark.sh', 'bqc', 'bhpart', 'lsf-spark-shell.sh', 'lsmakerm', 'lsf-spark-submit.sh', 'brestart', 'bswitch', 'bjgroup', 'lsreconfig', 'lammpirun_wrapper', 'lsf-stop-spark.sh', 'badmin', 'bbot', 'bstop', 'lsinfo', 'brun', 'bhist', 'bhosts', 'bgmod', 'brsvadd', 'bkill', 'brlainfo', 'brsvdel', 'xagent', 'bresize', 'bmig', 'lsmon', 'lsid', 'bgpinfo', 'lsmake', 'bresume', 'blaunch', 'lsacctmrg'] ['sview', 'strigger', 'sstat', 'sshare', 'srun', 'sreport', 'squeue', 'sprio', 'smap', 'sinfo', 'sgather', 'sdiag', 'scontrol', 'scancel', 'sbcast', 'sbatch', 'sattach', 'salloc', 'sacctmgr', 'sacct', 'qsub', 'tracejob', 'qterm', 'qstop', 'qstat', 'qstart', 'qsig', 'qselect', 'qrun', 'qrls', 'qrerun', 'qorder', 'qnodes', 'qmsg', 'qmove', 'qmgr', 'qhold', 'qgpureset', 'qgpumode', 'qenable', 'qdisable', 'qdel', 'qchkpt', 'qalter', 'printtracking', 'printserverdb', 'printjob', 'pbsnodes', 'pbsdsh', 'pbs_track', 'nqs2pbs', 'hostn', 'chk_tree', 'jobsub', 'jobstat', 'ctags', 'diffstat', 'rpmsign', 'swig', 'ccache-swig', 'ocs', 'cscope-indexer', 'cscope', 'doxygen', 'unwrapdiff', 'splitdiff', 'rediff', 'recountdiff', 'lsdiff', 'interdiff', 'grepdiff', 'flipdiff', 'fixcvsdiff', 'filterdiff', 'espdiff', 'editdiff', 'dehtmldiff', 'combinediff', 'yacc', 'byacc', 'indent', 'rlog', 'rcsmerge', 'rcsfreeze', 'rcsdiff', 'rcsclean', 'rcs', 'merge', 'ident', 'co', 'ci', 'svnversion', 'svnsync', 'svnserve', 'svnrdump', 'svnlook', 'svndumpfilter', 'svnadmin', 'svn', 'intltoolize', 'intltool-update', 'intltool-prepare', 'intltool-merge', 'intltool-extract', 'gettextize', 'autopoint', 'stap-report', 'stapsh', 'staprun', 'stap-merge', 'stap-prep', 'stap', 'screen', 'rhn_register', 'whiptail', 'subscription-manager', 'rhsmcertd', 'rhsm-debug', 'rct', 'consolehelper', 'pyinotify', 'easy_install-2.7', 'easy_install', 'snmpwalk', 'snmpvacm', 'snmpusm', 'snmptrap', 'snmptranslate', 'snmptls', 'snmptest', 'snmptable', 'snmpstatus', 'snmpset', 'snmpnetstat', 'snmpinform', 'snmpgetnext', 'snmpget', 'snmpdf', 'snmpdelta', 'snmpbulkwalk', 'snmpbulkget', 'encode_keychange', 'chardetect', 'atopsar', 'atopd', 'atopconvert', 'atop', 'abrt-dump-oops', 'abrt-action-save-kernel-data', 'abrt-action-analyze-oops', 'abrt-action-trim-files', 'abrt-action-perform-ccpp-analysis', 'abrt-action-list-dsos', 'abrt-action-install-debuginfo', 'abrt-action-generate-core-backtrace', 'abrt-action-generate-backtrace', 'abrt-action-analyze-vulnerability', 'abrt-action-analyze-core', 'abrt-action-analyze-ccpp-local', 'abrt-action-analyze-c', 'abrt-action-analyze-backtrace', 'abrt-watch-log', 'abrt-handle-upload', 'abrt-action-save-package-data', 'abrt-action-notify', 'abrt-action-analyze-xorg', 'reporter-ureport', 'reporter-rhtsupport', 'libtar', 'satyr', 'orig', 'git', 'git-receive-pack', 'git-upload-archive', 'git-upload-pack', 'git-shell', 'lex', 'tset', 'pk12util', 'as', 'lpr.cups', 'speaker-test', 'manpath', 'hwloc-gather-topology', 'hwloc-calc', 'rev', 'snmpconf', 'sctp_darn', 'trust', 'nm', 'fc-pattern', 'ucs2any', 'zforce', 'groups', 'gunzip', 'tracepath', 'rdma_xclient', 'unalias', 'db_upgrade', 'dbus-uuidgen', 'uuidgen', 'uname', 'df', 'fc-match', 'evim', 'schemagen', 'sessreg', 'rdoc', 'gdbus-codegen', 'perl', 'perl5.16.3', 'egrep', 'mlxcables', 'recode-sr-latin', 'pkcheck', 'GET', 'rvim', 'addr2line', 'gsdj500', 'rpmbuild', 'amixer', 'unexpand', 'ypchsh', 'yppasswd', 'ypchfn', 'install', 'cancel.cups', 'msggrep', 'mwm', 'gcc-nm', 'remunge', 'ibgenperm', 'thumbpdf', 'nsenter', 'clean-binary-files', 'httpcfg', 'mlnx_dump_parser', 'ghci', 'autoexpect', 'ntpstat', 'texluac', 'dtestsrq', 'lz4cat', 'pkttyagent', 'python2', 'pkla-admin-identities', 'hpc', 'tail', 'size', 'fc-query', 'mkluatexfontdb', 'dbus-cleanup-sockets', 'nisdomainname', 'ldapurl', 'xsd', 'startx', 'crash', 'mcdiff', 'make', 'gslp', 'mktexfmt', 'pmafm', 'xdg-desktop-icon', 'ldappasswd', 'csh', 'printenv', 'vncconfig', 'wqdump_ext', 'gendiff', 'mst_cable', 'X', 'mstvpd', 'zmore', 'db_hotbackup', 'signver', 'systemctl', 'amsvis', 'tbl', 'xmessage', 'servertool', 'sn', 'embedspu', 'rview', 'nohup', 'grops', 'geoipupdate', 'xfd', 'rm', 'infotocap', 'pwscore', 'eu-objdump', 'mysql', 'mailq.postfix', 'ptx', 'systemd-loginctl', 'mstop', 'rxe_cfg', 'ar', 'ccrewrite', 'diff-jars', 'python', 'pmsocks', 'migspeed', 'xmbind', 'objcopy', 'alias', 'dos2unix', 'ca-legacy', 'tclsh', 'ofed_rpm_info', 'hwloc-assembler-remote', 'vimtutor', 'lprm', 'pygtk-demo', 'jjs', 'prtstat', 'seq', 'col', 'pdcp', 'eu-strip', 'ib_acme', 'resourcedump', 'dirname', 'fc-cache-64', 'lesskey', 'date', 'basename', 'grep', 'geoiplookup6', 'ssh-copy-id', 'xterm', 'svcutil', 'libpng-config', 'dvilualatex', 'db_load', 'systemd-notify', 'dracut', 'texconfig', 'haddock', 'xrandr', 'umount', 'xdg-mime', 'prlimit', 'ucx_info', 'infokey', 'pstree.x11', 'mono-test-install', 'write', 'geqn', 'xdg-screensaver', 'glib-mkenums', 'sudoedit', 'mst', 'ghc-pkg-7.6.3', 'wall', 'dgawk', 'ibv_polldcinfo', 'ppc64le-redhat-linux-gcc', 'gcc', 'xzcat', 'simpdftex', 'cvsbug', 'pdflatex', 'mlxburn', 'ping', 'column', 'fc-cache', 'pinentry-curses', 'pmlogextract', 'scp', 'stdbuf', 'mlxcables_ext', 'renice', 'file', 'raw_ethernet_bw', 'msguniq', 'appletviewer', 'pdf2dsc', 'mlxpci', 'dig', 'gem', 'coredumpctl', 'eu-size', 'conjure', 'mlnx_conf_mgr.sh', 'alsaunmute', 'command', 'cd', 'sha1sum', 'xsltproc', 'hp2ps', 'erb', 'update-desktop-database', 'gtk-update-icon-cache', 'crontab', 'icewm', 'mktexmf', 'whoami', 'ttmkfdir', 'uxterm', 'ucx_perftest', 'ibcongest', 'mlnx_perf', 'funzip', 'ghc', 'pkg-config', 'nvidia-persistenced', 'unzipsfx', 'bootctl', 'fc-conflist', 'pango-querymodules-64', 'splain', 'curl', 'arch', 'xinit', 'pfbtopfa', 'mozroots', 'setsid', 'setterm', 'gr2fonttest', 'wqdump', 'gzexe', 'gtk-launch', 'compare', 'aseqdump', 'cc', 'nvidia-debugdump', 'icesh', 'udevadm', 'lc', 'icehelp', 'gvimdiff', 'taskset', 'xml2-config', 'pkill', 'bzmore', 'mogrify', 'systemd-analyze', 'mkdir', 'lpq.cups', 'libpng15-config', 'mc', 'repstopdf', 'ld', 'ld.bfd', 'systemd-sysv-convert', 'nproc', 'dbpmda', 'cksum', 'psed', 's2p', 'msghack', 'tabs', 'systemd-coredumpctl', 'jmap', 'libtoolize', 'etags.emacs', 'gtester', 'pmie', 'fg', 'ps2pdfwr', 'peekfd', 'ib_atomic_bw', 'preconv', 'dtestx', 'aria_dump_log', 'gpg-error', 'pmtrace', 'allec', 'post-grohtml', 'tree', 'net-snmp-create-v3-user', 'bunzip2', 'zcat', 'xzless', 'lscpu', 'xzmore', 'udaddy', 'alsamixer', 'find2perl', 'dtestcm', 'iconv', 'rpm2cpio', 'desktop-file-edit', 'ps2pdf13', 'ldapexop', 'hwloc-assembler', 'rpmquery', 'ibv_umr', 'chown', 'pdsh', 'gcc-ar', 'pdb2mdb', 'unshare', 'db_replicate', 'nsupdate', 'cpio', 'xmvn-builddep', 'comm', 'dbus-monitor', 'automake-1.13', 'automake', 'eu-stack', 'runghc-7.6.3', 'xgettext', 'chsh', 'eqn', 'gdb', 'lualatex', 'cpupower', 'build-jar-repository', 'gacutil2', 'gawk', 'rftp', 'kpsewhere', 'c99', 'nvidia-smi', 'reset', 'xdg-open', 'zip', 'split', 'mlx_fpga_ext', 'catchsegv', 'ghc-7.6.3', 'keytool', 'aria_chk', 'mlxreg', 'mstregdump', 'alsaucm', 'mlxlink', 'rename', 'chktrust', 'true', 'db_recover', 'mktexlsr', 'xpr', 'skill', 'otflist', 'gfortran', 'gtroff', 'uil', 'jvmjar', 'zgrep', 'elfedit', 'xclipboard', 'passwd', 'prove', 'eu-nm', 'openssl', 'su', 'kibitz', 'kpsestat', 'pgrep', 'printf', 'gtbl', 'ib_read_lat', 'zipdetails', 'gtar', 'jarsigner', 'mysql_find_rows', 'fold', 'gconf-merge-tree', 'munge', 'ln', 'tty', 'uuclient', 'stat', 'chfn', 'find-jar', 'wish', 'pmdiff', 'mkocp', 'lchsh', 'jconsole', 'luit', 'diff', 'rpmdb', 'gcore', 'rsync', 'fc-list', 'dmesg', 'libtool', 'mkfontscale', 'zsoelim', 'mstmcra', 'pod2usage', 'xjc', 'uptime', 'dump2slvl.pl', 'ldapwhoami', 'testrb', 'alsatplg', 'setarch', 'dbus-test-tool', 'msgfmt', 'alsa-delay', 'gview', 'texconfig-dialog', 'ps2pdf14', 'cairo-sphinx', 'sctp_test', 'ps2epsi', 'pmlogconf', 'dwz', 'amidi', 'updmap-sys', 'compile_et', 'man', 'cmp', 'hostnamectl', 'dd', 'tmon', 'vdir', 'pldd', 'sctp_status', 'iceauth', 'getfacl', 'xrdb', 'runhaskell-ghc', 'udpong', 'hwloc-distances', 'sh', 'db_stat', 'ib_write_bw', 'fmt', 'fc-validate', 'mcs', 'ibv_cc_pingpong', 'base64', 'ibv_devinfo', 'ibv_xsrq_pingpong', 'mlxreg_ext', 'sqlite3', 'ps2ps2', 'dapltest', 'tar', 'head', 'ps2pdf', 'ri', 'serialver', 'script', 'pstree', 'msgcomm', 'finger', 'fallocate', 'xzdec', 'whatis', 'gencat', 'perlthanks', 'perlbug', 'xconsole', 'xclock', 'wsdl', 'mlxtrace', 'aclocal', 'aclocal-1.13', 'red', 'readlink', 'unix2mac', 'vim', 'zegrep', 'certutil', 'hwloc-info', 'xinput', 'hwloc-distrib', 'gzip', 'ypcat', 'localedef', 'emacs', 'pmlogsummary', 'mlnx_interface_mgr.sh', 'mysql_config', 'gpgsplit', 'zipinfo', 'unzip', 'updatedb', 'idn', 'systemd-run', 'pwd', 'mailx', 'xzdiff', 'db_dump185', 'wish8.5', 'ibv_devices', 'ls', 'mcedit', 'iptables-xml', 'db_dump', 'unlz4', 'xdg-icon-resource', 'arecord', 'kernel-install', 'otftobdf', 'sqlmetal', 'mysqlslap', 'lp', 'dbus-run-session', 'xcursorgen', 'mremote', 'gsbj', 'ldapadd', 'unpigz', 'pigz', 'ed', 'gss-client', 'ibdiagm.sh', 'm4', 'systemd-path', 'kpsetool', 'cal', 'raw_ethernet_burst_lat', 'mpi-selector', 'lprsetup.sh', 'rvi', 'mono', 'xrefresh', 'zipsplit', 'lp.cups', 'batch', 'mysqladmin', 'ib_write_lat', 'ldapcompare', 'lprm.cups', 'which', 'msginit', 'oldfind', 'toe', 'unlink', 'lz4c', 'ppc64le-redhat-linux-g++', 'c++', 'g++', 'ppc64le-redhat-linux-c++', 'montage', 'ghostscript', 'diff3', 'run-singularity', 'dcgmi', 'ibdiagpath', 'pmfind', 'free', 'ghc-doc-index', 'gpg-zip', 'tcsh', 'mconfig', 'gpgv2', 'jdb', 'pmpython', 'allneeded', 'icewmhint', 'pinky', 'rmid', 'ebrowse', 'lsblk', 'xmlwf', 'memhog', 'ruby', 'eu-findtextrel', 'dislocate', 'vncviewer', 'less', 'ibdev2netdev', 'lsmem', 'systemd-ask-password', 'kpsereadlink', 'lstopo-no-graphics', 'bzcat', 'python2-config', 'cat', 'ngettext', 'gtk-query-immodules-3.0-64', 'apropos', 'dimax_init', 'icewmtray', 'linux64', 'mstcongestion', 'gdb-add-index', 'who', 'dviluatex', 'xwud', 'pstack', 'ldapmodrdn', 'bzgrep', 'ucx_read_profile', 'ionice', 'bison', 'rmic', 'mktexpk', 'ppc32', 'ranlib', 'jhat', 'slabtop', 'x11perf', 'systemd-cgtop', 'wait', 'catman', 'xauth', 'systemd-cat', 'cancel', 'bg', 'env', 'xkill', 'pmlc', 'numactl', 'tnameserv', 'pmdbg', 'at', 'convert', 'Xvnc', 'flint_ext', 'strings', 'soapsuds', 'gstack', 'msgcmp', 'mkofm', 'ssh-keygen', 'sdiff', 'HEAD', 'ib_send_lat', 'mkfontdir', 'pgawk', 'mysqlbinlog', 'lppasswd', 'dbus-daemon', 'emacs-24.3', 'nroff', 'locate', 'setup-nsssysinit.sh', 'igawk', 'mlx_fs_dump', 'gsdj', 'tic', 'lsinitrd', 'weather', 'gcov', 'mono-boehm', 'patch', 'sudo', 'ib_read_bw', 'info', 'dump2psl.pl', 'xsetmode', 'jrunscript', 'kdumpctl', 'lslocks', 'gnroff', 'shuf', 'vmstat', 'latex', 'lslogins', 'lua', 'flex++', 'ssh-keyscan', 'mlxtrace_ext', 'msgattrib', 'signtool', 'rpmverify', 'getent', 'pmieconf', 'ssh-agent', 'xdg-desktop-menu', 'ibdmchk', 'ibnetsplit', 'link', 'gpg-agent', 'pmlogcheck', 'mlxlink_ext', 'dbus-update-activation-environment', 'bc', 'nice', 'raw', 'mlxgearbox', 'pmevent', 'riostream', 'wftopfa', 'aserver', 'mget_temp', 'javadoc', 'unxz', 'ib_send_bw', 'cpp', 'desktop-file-install', 'checksctp', 'ucmatose', 'gpg', 'jsadebugd', 'kpsewhich', 'aria_read_log', 'whereis', 'systemd-tty-ask-password-agent', 'pmerr', 'mysqldump', 'mstfwtrace', 'java', 'dvi2fax', 'ibv_intf', 'tzselect', 'ibv_dctgt', 'fmtutil', 'gsoelim', 'chmem', 'ssh', 'mstmtserver', 'wsdl2', 'pmdate', 'modutil', 'vncserver', 'pmval', 'pmstore', 'systemd-stdio-bridge', 'paste', 'xdg-email', 'POST', 'pod2text', 'gacutil', 'setpriv', 'mandb', 'lsattr', 'tracepath6', 'xwd', 'rdma_server', 'desktop-file-validate', 'mget_temp_ext', 'nvidia-modprobe', 'truncate', 'numfmt', 'mlnx_qos', 'xbiff', 'ppc64', 'lwp-request', 'xgamma', 'rmail', 'mkfifo', 'luac', 'hsc2hs-ghc', 'texconfig-sys', 'systemd-detect-virt', 'secon', 'rebuild-jar-repository', 'sim_client', 'h2ph', 'pminfo', 'f95', 'bashbug-64', 'mktemp', 'gneqn', 'sum', 'unbuffer', 'newgrp', 'mlxfwmanager', 'allcm', 'usleep', 'etags', 'ikdasm', 'mac2unix', 'sha384sum', 'wsimport', 'hwloc-patch', 'ofed_info', 'cvtsudoers', 'krb5-config', 'mstfwreset', 'pdfetex', 'dir', 'sprof', 'run_perftest_multi_devices', 'cp', 'ypwhich', 'xset', 'jstack', 'sxpm', 'pmclient', 'chattr', 'run-parts', 'mstconfig', 'gapplication', 'extcheck', 'mlxvpd', 'ghc-pkg', 'eu-elfcompress', 'fribidi', 'fc', 'x11perfcomp', 'logger', 'watchgnupg', 'dtest', 'xeyes', 'csslint-0.6', 'timeout', 'makedb', 'ibdump', 'chcon', 'aconnect', 'ib_atomic_lat', 'stream', 'icewm-xdg-menu', 'runhaskell', 'msgunfmt', 'lexgrog', 'lsipc', 'expect', 'bashbug', 'xz', 'fmtutil-sys', 'gettext.sh', 'glib-compile-schemas', 'pmstat', 'javah', 'ipcmk', 'pstruct', 'c2ph', 'mtserver', 'luatex', 'cert-sync', 'mlxmdio', 'rdma_xserver', 'pmlogger', 'mountpoint', 'eu-ranlib', 'rmdir', 'hostname', 'pmap', 'ipcalc', 'zipnote', 'lwp-dump', 'pdf2ps', 'gpasswd', 'animate', 'zsh', 'python-config', 'db_deadlock', 'vpi_tcpdump', 'jcmd', 'migratepages', 'resize', 'showrgb', 'captoinfo', 'pax', 'rstream', 'jps', 'ps', 'systemd-cgls', 'db_tuner', 'systemd-inhibit', '[', 'ul', 'snice', 'rpmspec', 'wc', 'pod2html', 'timed-read', 'ibdiagnet', 'lwp-download', 'haddock-ghc-7.6.3', 'cmsutil', 'updmap', 'xvidtune', 'last', 'mlxprivhost', 'top', 'pmdumplog', 'scriptreplay', 'urlgrabber', 'mstprivhost', 'quotasync', 'chgrp', 'touch', 'neqn', 'fc-cat', 'xmag', 'msgen', 'pack200', 'mount', 'md5sum', 'sudoreplay', 'ps2ps', 'gmake', 'autom4te', 'dircolors', 'sha256sum', 'pre-grohtml', 'tsort', 'getconf', 'eu-elflint', 'texlua', 'db_log_verify', 'fc-scan', 'getopt', 'pmie2col', 'vi', 'tload', 'ibv_task_pingpong', 'atrm', 'gettext', 'dc', 'db_archive', 'rdma_client', 'xorg-x11-fonts-update-dirs', 'fonttosfnt', 'etex', 'pf2afm', 'aplaymidi', 'mcookie', 'jar', 'nslookup', 'setxkbmap', 'ipmitool', 'mlxdump', 'hwloc-ls', 'realpath', 'ps2ascii', 'ksh', 'mlxmcg', 'pdftex', 'lpstat', 'read', 'dbus-send', 'perldoc', 'pkcs1-conv', 'jdeps', 'jstatd', 'kpsexpand', 'lwp-mirror', 'mailq', 'gnuplot', 'kpsepath', 'sort', 'grep-changelog', 'fgrep', 'eu-readelf', 'numastat', 'shcomp', 'sync', 'flock', 'timed-run', 'cvt', 'rpm', 'composite', 'autoheader', 'setfacl', 'db_printlog', 'db_verify', 'zcmp', 'expand', 'kpseaccess', 'xmllint', 'csplit', 'bdftopcf', 'ypdomainname', 'soelim', 'podselect', 'kmod', 'mono-heapviz', 'alsaloop', 'pmlogmv', 'cut', 'nvidia-bug-report.sh', 'xzgrep', 'pinentry', 'lpstat.cups', 'eu-ar', 'dvired', 'nettle-lfib-stream', 'jinfo', 'c89', 'mono-service', 'runghc', 'hwloc-bind', 'gtf', 'journalctl', 'dbus-binding-tool', 'check-binary-files', 'hwloc-compress-dir', 'icewm-set-gnomewm', 'perf', 'lpoptions', 'msgconv', 'printafm', 'lpr', 'tput', 'keyctl', 'ex', 'bzless', 'sha512sum', 'withsctp', 'ssh-add', 'mesg', 'findmnt', 'gpgconf', 'host', 'agentxtrap', 'umask', 'raw_ethernet_fs_rate', 'fipshmac', 'gdbus', 'mono-sgen-gdb.py', 'gtester-report', 'ibv_dcini', 'lesspipe.sh', 'mysqlshow', 'piconv', 'xload', 'gtk-query-immodules-2.0-64', 'rmail.postfix', 'dshbak', 'localectl', 'ipcs', 'gex', 'locale', 'db_checkpoint', 'i2c', 'ldd', 'gs', 'arecordmidi', 'msql2mysql', 'autoupdate', 'find', 'chmod', 'amsstat', 'eu-addr2line', 'rpcgen', 'c++filt', 'sndfile-resample', 'hwloc-ps', 'look', 'ibdmtr', 'genpmda', 'pmprobe', 'rksh', 'pod2man', 'xzcmp', 'mlxfwreset', 'zipgrep', 'utmpdump', 'more', 'gdk-pixbuf-query-loaders-64', 'tc_wrap.py', 'rmiregistry', 'gpg-connect-agent', 'xfontsel', 'gsnd', 'xkbcomp', 'mprof-report', 'mktextfm', 'namei', 'gsettings', 'numademo', 'mpi-selector-menu', 'view', 'icewmbg', 'gcc-ranlib', 'hesinfo', 'cvs', 'pckt_drop', 'gnuplot-wx', 'objdump', 'mckey', 'chrt', 'unix-lpr.sh', 'nail', 'mlnx_qcn', 'sss_ssh_knownhostsproxy', 'ibv_uc_pingpong', 'envsubst', 'ghci-7.6.3', 'mkinitrd', 'autoconf', 'eu-unstrip', 'mysqlcheck', 'ipcrm', 'pango-list', 'lsns', 'loginctl', 'otfdump', 'hwloc-diff', 'mysql_waitpid', 'uniq', 'nvidia-xconfig', 'gvimtutor', 'setup-nsssysinit', 'dvipdf', 'wdctl', 'tee', 'killall', 'cabal', 'mcview', 'ldapsearch', 'sg', 'flex', 'runcon', 'xzegrep', 'gpg2', 'identify', 'tac', 'colcrt', 'pmgenmap', 'font2c', 'nvidia-cuda-mps-server', 'unpack200', 'readelf', 'mlxi2c', 'hexdump', 'ssltap', 'ibtopodiff', 'cxpm', 'msgcat', 'update-mime-database', 'singularity', 'pmloglabel', 'mono-sgen', 'xcutsel', 'irb', 'pmjson', 'login', 'factor', 'linux32', 'machinectl', 'lsb_release', 'vimx', 'gio', 'wget', 'troff', 'busctl', 'lastb', 'pmclient_fg', 'native2ascii', 'mono-service2', 'ibv_srq_pingpong', 'mknod', 'strace', 'sexp-conv', 'time', 'gio-querymodules-64', 'Mail', 'du', 'dconf', 'mlnx_get_vfs.pl', 'domainname', 'alsabat', 'systemd-tmpfiles', 'strace-log-merge', 'ibv_rc_pingpong', 'python2.7', 'sleep', 'cmtime', 'pwdx', 'lpunlock', 'eject', 'mdevices_info', 'ifnames', 'sha224sum', 'koi8rxterm', 'sed', 'getopts', 'xlogo', 'mlxuptime', 'newaliases.postfix', 'aseqnet', 'systemd-firstboot', 'xargs', 'nettle-hash', 'python2.7-config', 'ncursesw5-config', 'pcre-config', 'qperf', 'eu-make-debug-archive', 'newaliases', 'chage', 'build-classpath', 'mysqlaccess', 'bzdiff', 'isosize', 'mstmwrite', 'expr', 'pwmake', 'systemd-escape', 'ncurses5-config', 'xsetroot', 'ibnlparse', 'lstopo', 'lessecho', 'autoreconf', 'gslj', 'orbd', 'clear', 'gctags', 'vncpasswd', 'icewm-session', 'atq', 'mysqlimport', 'rpmkeys', 'xxd', 'xhost', 'ibv_asyncwatch', 'wsgen', 'sotruss', 'mstflint', 'run_perftest_loopback', 'watch', 'net-snmp-config', 'msgfilter', 'systemd-hwdb', 'lastlog', 'slogin', 'gconftool-2', 'ldapdelete', 'test', 'mst_ib_add', 'pkexec', 'zipcloak', 'rsyslog-recover-qi.pl', 'pkaction', 'unix2dos', 'groff', 'shred', 'itrace', 'xmlcatalog', 'texhash', 'systemd-machine-id-setup', 'flint', 'ibdiagnet_csv2xml.py', 'iecset', 'hwloc-annotate', 'eps2eps', 'autoscan', 'grotty', 'colrm', 'bash', 'glib-gettextize', 'yes', 'lz4', 'epstopdf', 'gpgparsemail', 'spax', 'pr', 'kill', 'bzcmp', 'mlxdump_ext', 'ypmatch', 'ibv_ud_pingpong', 'aria_ftdump', 'w', 'logname', 'ksh93', 'od', 'xmodmap', 'gpic', 'pmlogsize', 'p11-kit', 'systemd-nspawn', 'm17n-conv', 'bzip2', 'timedatectl', 'gresource', 'rping', 'infocmp', 'unmunge', 'nl', 'users', 'minit', 'idlj', 'xstdcmap', 'msgmerge', 'a2p', 'csharp', 'mft_uninstall.sh', 'testgdbm', 'gdk-pixbuf-thumbnailer', 'hsc2hs', 'lpq', 'glib-genmarshal', 'tailf', 'quota', 'hca_self_test.ofed', 'id', 'stty', 'update-ca-trust', 'mlxconfig', 'setreg', 'xzfgrep', 'mv', 'fipscheck', 'ftp-rfc', 'disco', 'sqlsharp', 'join', 'xsetpointer', 'ppc', 'rlogin-cwd', 'vimdiff', 'lchfn', 'tr', 'chacl', 'echo', 'netstat', 'texlinks', 'pkla-check-authorization', 'display', 'strip', 'xdg-settings', 'rpdcp', 'mstdump', 'mkpasswd', 'ping6', 'mlxphyburn', 'pydoc', 'ps2pdf12', 'jstat', 'gpgv', 'eu-strings', 'pphs', 'eu-elfcmp', 'jobs', 'zfgrep', 'systemd-delta', 'update-gtk-immodules', 'glib-compile-resources', 'gsettings-data-convert', 'pic', 'mlx_fpga', 'dotlockfile', 'gobject-query', 'redhat_lsb_init', 'Xorg', 'import', 'sftp', 'emacsclient', 'raw_ethernet_lat', 'zless', 'aria_pack', 'msgexec', 'false', 'crlutil', 'nvidia-cuda-mps-control', 'oclock', 'dnsdomainname', 'javac', 'pcp', 'mail', 'fwtrace', 'xdpr', 'awk', 'tclsh8.5', 'gprof', 'xkibitz', 'my_print_defaults', 'rcopy', 'passmass', 'pod2latex', 'freetype-config', 'bzip2recover', 'bdftruncate', 'x0vncserver', 'yum', 'abs2rel', 'geoiplookup', 'pcp2csv', 'build-classpath-directory', 'otfview', 'znew', 'mstmread', 'aplay', 'gvim', 'nvvs', 'ldapmodify', 'nv-hostengine', 'pl2pm', 'javap', 'pango-view', 'ibsim', 'sss_ssh_authorizedkeys', 'hostid', 'create-jar-links', 'mcra', 'zdiff', 'pathchk'] ['trqauthd', 'rhnsd', 'rhn_check', 'spacewalk-channel', 'rhnreg_ks', 'rhn_register', 'rhn-channel', 'rhn-profile-sync', 'subscription-manager', 'userhelper', 'pifconfig', 'pethtool', 'virt-what', 'atopacctd', 'abrt-install-ccpp-hook', 'abrt-dbus', 'abrt-configuration', 'abrtd', 'abrt-server', 'abrt-auto-reporting', 'vgcfgrestore', 'selabel_digest', 'resize2fs', 'luserdel', 'bootlist', 'fdisk', 'thin_trim', 'e4defrag', 'tracepath', 'pwhistory_helper', 'mkdumprd', 'mke2fs', 'mkfs.ext2', 'mkfs.ext3', 'mkfs.ext4', 'badblocks', 'mii-diag', 'lpc', 'lgroupmod', 'rpc.statd', 'lsdevinfo', 'ibfindnodesusing.pl', 'ifup', 'alsa-info', 'ibdiscover.pl', 'load_policy', 'rtcwake', 'thin_repair', 'usermod', 'xfs_freeze', 'lvs', 'xfs_mdrestore', 'plipconfig', 'groupmod', 'fsck.xfs', 'lsvpd', 'unix_update', 'readprofile', 'vgreduce', 'losetup', 'sshd-keygen', 'update-alternatives', 'rtas_event_decode', 'selabel_lookup_best_match', 'cracklib-check', 'ntptime', 'partx', 'agetty', 'pvdisplay', 'vmcore-dmesg', 'show_irq_affinity_hints.sh', 'mlnx_net_rules', 'kexec', 'cracklib-unpacker', 'lsprop', 'thin_dump', 'alternatives', 'vendor_pre_uninstall.sh', 'yppoll', 'swaplabel', 'lvchange', 'blockdev', 'ibdatacounts', 'dracut', 'useradd', 'zdump', 'alsa-info.sh', 'lparstat', 'ctrlaltdel', 'smpdump', 'ss', 'swapoff', 'swapon', 'zic', 'ipmaddr', 'sys-unconfig', 'sldd.sh', 'iconvconfig.ppc64le', 'iconvconfig', 'tcsd', 'ibhosts', 'dmsetup', 'lid', 'chcpu', 'cache_dump', 'ibchecknode', 'ibroute', 'depmod', 'vgremove', 'pseries_platform', 'nvme', 'getpcaps', 'ppp-watch', 'lscfg', 'cache_repair', 'xfs_logprint', 'postlock', 'serv_config', 'dumpe2fs', 'nvram', 'udevadm', 'parted', 'lsmod', 'tc', 'ntpdate', 'sestatus', 'fsck.minix', 'rpcinfo', 'pmc', 'groupmems', 'srp_daemon.sh', 'iptables-restore', 'pwunconv', 'routel', 'postqueue', 'ls-vdev', 'lpasswd', 'sysctl', 'e2freefrag', 'dmstats', 'capsh', 'sendmail', 'xfs_db', 'pam_timestamp_check', 'chpasswd', 'lvdisplay', 'hwstamp_ctl', 'lnewusers', 'zramctl', 'yptest', 'quotacheck', 'ibdatacounters', 'lvcreate', 'mkdict', 'vgmknodes', 'iptables-save', 'fixfiles', 'set_irq_affinity_cpulist.sh', 'lspci', 'xtables-multi', 'blkdeactivate', 'postlog', 'fsck', 'lsslot', 'xfs_quota', 'rdisc', 'update_flash_nv', 'srp_daemon', 'bridge', 'saquery', 'ibswitches', 'addpart', 'smpquery', 'sss_cache', 'clockdiff', 'ntpdc', 'ypset', 'runlevel', 'sssd', 'build-locale-archive', 'ntpd', 'nfsidmap', 'ipmievd', 'atrun', 'postcat', 'odp_stat.sh', 'lvconvert', 'e2fsck', 'fsck.ext2', 'fsck.ext3', 'fsck.ext4', 'rtstat', 'ibprintrt.pl', 'ifconfig', 'era_dump', 'xfs_growfs', 'sminfo', 'lvmsadc', 'ibclearcounters', 'dmfilemapd', 'restorecon', 'thin_ls', 'ldattach', 'grpconv', 'vendor_post_uninstall.sh', 'ntpq', 'nvsetenv', 'era_check', 'connectx_port_config', 'postconf', 'delpart', 'try-from', 'vpdupdate', 'era_restore', 'avcstat', 'munged', 'snmpd', 'mountstats', 'mklost+found', 'lvmsar', 'ls-veth', 'snmptrapd', 'route', 'ibsrpdm', 'ibstat', 'phc2sys', 'lvresize', 'cracklib-packer', 'new-kernel-pkg', 'fsck.nfs', 'irqbalance', 'logrotate', 'xfs_rtcp', 'rpc.rquotad', 'ibcacheedit', 'genhomedircon', 'genl', 'exportfs', 'xfs_bmap', 'grpck', 'alsactl', 'cache_writeback', 'newusers', 'selabel_partial_match', 'makedumpfile', 'show_gids', 'mlnx_affinity', 'ofed_uninstall.sh', 'vgexport', 'lvmdump', 'nslcd', 'pvresize', 'partprobe', 'set_irq_affinity_bynode.sh', 'show_irq_affinity.sh', 'dump_fts', 'errinjct', 'hardlink', 'matchpathcon', 'fdformat', 'vgextend', 'fsfreeze', 'ofpathname', 'pwck', 'dhclient', 'postdrop', 'sendmail.postfix', 'vgcfgbackup', 'sulogin', 'hack-coff', 'lpc.cups', 'xfs_info', 'ypbind', 'nameif', 'nstat', 'mkfs.cramfs', 'sim_server', 'activate_firmware', 'nfsstat', 'opensm', 'gssproxy', 'ibaddr', 'mkfs.xfs', 'groupadd', 'halt', 'osmtest', 'lvmpolld', 'lsmcode', 'pvs', 'lvremove', 'start-statd', 'debugfs', 'setpci', 'selinuxexeccon', 'ibportstate', 'rtmon', 'ibcheckerrors', 'vgimportclone', 'e2label', 'tune2fs', 'rtas_dump', 'postfix', 'lnstat', 'dump_mfts.sh', 'thin_restore', 'check_lft_balance.pl', 'ibidsverify.pl', 'cma_roce_tos', 'selabel_lookup', 'ip6tables-save', 'rmmod', 'cache_metadata_size', 'nsm', 'run_srp_daemon', 'runuser', 'xfs_metadump', 'getcap', 'sefcontext_compile', 'ip', 'iptables', 'glibc_post_upgrade.ppc64le', 'fsadm', 'iblinkinfo.pl', 'ibqueryerrors.pl', 'setfiles', 'sys_ident', 'dhclient-script', 'tracepath6', 'findfs', 'getsebool', 'cbq', 'e2image', 'blkdiscard', 'uuserver', 'ifcfg', 'shutdown', 'smtp-source', 'install-info', 'set_nodedesc.sh', 'xfs_repair', 'rsyslogd', 'rpcdebug', 'lvm', 'mkhomedir_helper', 'pvscan', 'logsave', 'pwconv', 'unsquashfs', 'ntp-keygen', 'e2undo', 'blkmapd', 'vgscan', 'osd_login', 'umount.nfs', 'ibcheckerrs', 'rpc.nfsd', 'iblinkinfo', 'ibtracert', 'cfdisk', 'common_irq_affinity.sh', 'modinfo', 'sasldblistusers2', 'rtpr', 'selinuxconlist', 'wrapper', 'blkid', 'ibclearerrors', 'lvmconf', 'xqmstats', 'vgsplit', 'postsuper', 'thin_check', 'filefrag', 'adduser', 'redhat_lsb_trigger.ppc64le', 'dump_lfts.sh', 'drmgr', 'cache_check', 'crond', 'pvchange', 'vendstat', 'setenforce', 'addgnupghome', 'tcpdmatch', 'reboot', 'vipw', 'rpc.gssd', 'cracklib-format', 'perfquery', 'sln', 'pivot_root', 'create-cracklib-dict', 'quotaon', 'groupdel', 'ptp4l', 'mkfs', 'xfs_estimate', 'dmeventd', 'gss-server', 'usernetctl', 'show_counters', 'xfs_ncheck', 'vgchange', 'grpunconv', 'quotastats', 'iptunnel', 'dkms', 'resizepart', 'sysctl_perf_tuning', 'xfs_mkfile', 'repquota', 'ip6tables-restore', 'lusermod', 'wipefs', 'sshd', 'ifdown', 'cache_restore', 'arp', 'pvremove', 'clock', 'tickadj', 'ldconfig', 'selinuxdefcon', 'lvreduce', 'vigr', 'quot', 'vgdisplay', 'lchage', 'arping', 'ibacm', 'ibcheckportstate', 'smparquery', 'insmod', 'addnote', 'lvmetad', 'ibprintca.pl', 'switch_root', 'hwclock', 'kpartx', 'ifstat', 'sysinfo-snapshot.py', 'setsebool', 'edquota', 'killall5', 'pidof', 'anacron', 'service', 'sfdisk', 'vgimport', 'vgrename', 'sm-notify', 'lvmdiskscan', 'lvscan', 'selinuxenabled', 'nologin', 'atd', 'accessdb', 'ibcheckstate', 'userdel', 'lsvio', 'ibnodes', 'weak-modules', 'quotaoff', 'setquota', 'era_invalidate', 'automount', 'xfs_copy', 'sosreport', 'consoletype', 'phc_ctl', 'safe_finger', 'ppc64_cpu', 'mlnx_eswitch_set', 'uesensor', 'rpc.mountd', 'ls-vscsi', 'ibsysstat', 'modprobe', 'ibstatus', 'lgroupadd', 'vgs', 'rtacct', 'pdata_tools', 'telinit', 'setup_mr_cache.sh', 'poweroff', 'lsof', 'slattach', 'visudo', 'ibcheckportwidth', 'update-pciids', 'nscd', 'update_flash', 'smtp-sink', 'mkswap', 'sushell', 'lvmconfig', 'mktree', 'xfs_admin', 'ctstat', 'lvrename', 'ibmirror', 'pam_tally2', 'chkconfig', 'pam_console_apply', 'xfs_io', 'ib2ib_setup', 'nfsdcltrack', 'mksquashfs', 'umount.nfs4', 'arpd', 'rtas_ibm_get_vpd', 'setcap', 'rtas_dbg', 'chroot', 'ibqueryerrors', 'grubby', 'timemaster', 'ibchecknet', 'installkernel', 'vgmerge', 'rpc.idmapd', 'create-munge-key', 'routef', 'mount.nfs', 'pvmove', 'ip6tables', 'postmulti', 'ibnetdiscover', 'key.dns_resolver', 'request-key', 'alsabat-test.sh', 'genhostid', 'ibswportwatch.pl', 'postmap', 'init', 'ibprintswitch.pl', 'ether-wake', 'ifenslave', 'selinux_restorecon', 'fstrim', 'xfs_fsr', 'packer', 'lgroupdel', 'vgcreate', 'mount.nfs4', 'ethtool', 'fsck.cramfs', 'postalias', 'lvextend', 'vgconvert', 'saslpasswd2', 'netreport', 'mkfs.minix', 'cma_roce_mode', 'ibcheckwidth', 'thin_metadata_size', 'faillock', 'thin_rmap', 'ibcheckport', 'pvck', 'postkick', 'ibrouters', 'pvcreate', 'tcpd', 'vgck', 'rpcbind', 'ping6', 'opal-prd', 'thin_delta', 'mii-tool', 'showmount', 'ibccquery', 'devlink', 'set_irq_affinity.sh', 'ibping', 'nfsiostat', 'mlnx_tune', 'hvcsadmin', 'unix_chkpwd', 'getenforce', 'luseradd', 'set_poweron_time', 'semodule', 'convertquota', 'applygnupgdefaults', 'fuser', 'ibccconfig', 'compat_gid_gen'] ['darshan-mk-log-dirs.pl', 'darshan-gen-cc.pl', 'darshan-gen-cxx.pl', 'darshan-gen-fortran.pl', 'darshan-config'] ['htar', '5.0.2.9', '6.0.0.11', '5.0.2.11', 'hsi', '6.2.0.1', 'TA_Status', 'test_TA'] ['esub', 'esub.poe', 'pim', 'lsf_daemons', 'rla', 'elim.jsdl', 'named', 'esub.tv', 'esub.openmp', 'esub.mvapich', 'esub.dprov', 'sbatchd', 'esub.bproc', 'esub.openmpi', 'esub.oldtvpoe', 'esub.mpichp4', 'elim.frequency', 'esub.tvlammpi', 'esub.oldpoe', 'lim', 'esub.ls_dyna', 'esub.tvmpich_gm', 'esub.fluent', 'nios', 'esub.gold', 'esub.mpich_gm', 'esub.pvm', 'esub.intelmpi', 'esub.mpich_mx', 'eauth.krb5', 'res', 'tmp.elim.sa', 'eauth', 'esub.tvpoe', 'mesub', 'esub.mpich2', 'melim', 'esub.lammpi'] ['csm_bb_vg_create', 'csm_node_find_job', 'csm_cluster_query_state', 'csm_allocation_create', 'csm_ib_cable_update', 'csm_allocation_query_active_all', 'csm_bb_lv_delete', 'csm_allocation_update_state', 'csm_switch_attributes_update', 'csm_soft_failure_recovery', 'csm_diag_run_query', 'csm_allocation_step_begin', 'csm_bb_vg_delete', 'csm_node_attributes_query_history', 'csm_allocation_query_details', 'csm_node_attributes_query_details', 'csm_diag_run_query_details', 'csm_ras_event_create', 'csm_diag_run_begin', 'csm_node_resources_query_all', 'csm_allocation_query', 'csm_ras_event_query_allocation', 'csm_switch_attributes_query', 'csm_node_attributes_query', 'csm_switch_attributes_query_details', 'csm_infrastructure_health_check', 'csm_node_attributes_update', 'csm_ras_msg_type_create', 'csm_ras_msg_type_delete', 'csm_ras_msg_type_query', 'csm_node_query_state_history', 'csm_switch_attributes_query_history', 'csm_allocation_step_query_active_all', 'csm_bb_lv_create', 'csm_node_resources_query', 'csm_allocation_delete', 'csm_ras_event_query', 'csm_allocation_resources_query', 'csm_diag_result_create', 'csm_node_delete', 'csm_ras_msg_type_update', 'csm_bb_vg_query', 'csm_ib_cable_query_history', 'csm_diag_run_end', 'csm_allocation_step_query', 'csm_allocation_step_query_details', 'csm_allocation_update_history', 'csm_allocation_step_end', 'csm_ib_cable_query', 'csm_jsrun_cmd', 'csm_bb_lv_query'] [] [] ['decoder'] ['ibmsquit', 'ibis', 'dump2slvl.pl', 'ibdiagpath', 'IBMgtSim', 'dump2psl.pl', 'ibdmchk', 'mkSimNodeDir', 'ibdiagui', 'ibdiagnet', 'RunSimTest', 'ibdmtr', 'ibtopodiff', 'ibdmsh', 'ibnlparse', 'ibmssh'] ['jsrun', 'jswait', 'jskill', 'query_env', 'export_slurm_env', 'jsm_simulator', 'js_task_info', 'admin', 'jsproxy', 'jslist', 'export_smpi_env', 'jsm', 'stock'] ['hiera', 'facter', 'puppet', 'facter-ng.bat'] ['mmtrace', 'mmsysmon.py', 'mmnfsfuncs', 'mmcesnfsmonitor', 'mmjob', 'mmdelcallback', 'tsdf', 'tschfileset', 'tslsdisk', 'tslspolicy', 'tslsfs', 'tsdelsnapshot', 'tslsfileset', 'tsnsdaccess', 'tscrsnapshot', 'tslspool', 'tssnapdir', 'tsedquota', 'tsusercmd', 'tslssnapshot', 'tsstatus', 'mmcrnsd', 'tsgetscsiinfo', 'mmqosnice', 'mmsetquota', 'mmdelfileset', 'tsprpreemptabort', 'cleanupkeystonedb', 'mmsdrfsdef.Linux', 'mmcesuserauthcrservice', 'mmdumpfilocks', 'tschdisk', 'tsaddpdisk', 'tsctl', 'tskafkaauth', 'tsdbfs', 'tscheckquota', 'tsfsctl', 'tsrpldisk', 'tschpdisk', 'tsrecgroupserver', 'tscmd', 'tsreclaimspace', 'tscrrecgroup', 'tschstoragepool', 'tsrestripefs', 'tsdefragfs', 'tsfileid', 'tsdsh', 'tsdeldisk', 'tsquotaon', 'tschfs', 'tsdefedquota', 'tsunmount', 'tsdelpdisk', 'tsressnapshot', 'tscrvdisk', 'tsquotaoff', 'tsexpelnode', 'tslsvdisk', 'tscrfs', 'tschmgr', 'tslsrecgroup', 'tslsrecoverygroupevents', 'tsdelvdisk', 'tsnsddiscover', 'tsdefquotaoff', 'tscrfileset', 'tsdelfs', 'tsdbvdisk', 'tsdelfileset', 'tsadddisk', 'tscachectl', 'tsdefquotaon', 'tschcarrier', 'tsauth', 'tslsqos', 'tslspdisk', 'tsnsdrediscover', 'tsremount', 'tsdelrecgroup', 'tschpool', 'tsrepquota', 'tschqos', 'tschrecgroup', 'tsfsck', 'tsdiag', 'tssbrff', 'mmlsfileset', 'mmexectsmcmd', 'mmgetkafkaspecinfo', 'mmfs', 'mmchconfig', 'ces.snap.py', 'mmperfmon', 'tsgetacl', 'clstrwatchcallbacks', 'mmcessmblsconfig', 'tslsattr', 'mmcesmonitord', '.links', 'mmnfsgrace', 'mmhelp-apolicy', 'mmpmon', 'mmcesnfsdelexport', 'mmchpolicy', 'gui.snap.py', 'tspcache', 'perfmon.snap.py', 'mmsdrquerydef', 'mmlsqos', 'mmxargs', 'tschattr', 'mmclidecode', 'clstrwatchconsumermanager', 'mmfsctl', 'mmpsnap', 'mmccrnv', 'perf.snap.py', 'mmcespnfsip', 'mmnfsnodeback', 'tsimgrestore', 'mmcesuserauthckservice', 'mmchnodeclass', 'pymmcesnfslsexport.py', 'mmdelacl', 'mmumount', 'mmcrnodeclass', 'mmsysmonc', 'tspcacheevict', 'mmexecvfile', 'sshwrap', 'mmgetifconf', 'mmfs-ppc64-rh4', 'sysmon.snap.py', 'mmimgrestore', 'mmcesobjaccesslinkfset', 'mmchecksubsys', 'mmcesop', 'tspmon', 'mmdefedquota', 'mmdelsnapshot', 'mmreclaimspace', 'mmsysmoncontrol', 'tsspectrumdiscover', 'mmyfields', 'mmchnode', 'mmrestorefs', 'mmcallhome', 'mmexportfs', 'mmcesnfsloadexport', 'tslspool34', 'mmnfsmonitor', 'mmsnmpagentd30', 'tsfindinode', 'mmfsfuncs.Linux', 'mmdumpperfdata', 'mmcesobjcrbase', 'mmdsh', 'objmetric_count.py', 'mmauditmount', 'mmcessmblsexport', 'mmdevdiscover', 'mmlsnode', 'mmautoload', 'mmcesnfscrexport', 'mmchnsd', 'mmfileid', 'mmcesnfsfuncs', 'mmcesrecovernode', 'mmlsfs', 'mmcollectdebugdata', 'tseditacl', 'tsbuhelper', 'tslinkfileset', 'tspreparedisk', 'mmrpldisk', 'mmdelnode', 'mmceslog', 'mmcrfsc', 'mmcesblockfuncs', 'mmgensymtable', 'mmfsd', 'mmnfsinstall', 'mmdspmsg', 'mmclone', 'mmchfs', 'mmlsdisk', 'mmnfstakeover', 'tsyselect', 'mmnfsup', 'mmcessmbcrexport', 'tsaddrmap', 'mmnetverify', 'mmchpool', 'msgqueue.snap.py', 'mmcesobjlscfg', 'tsrestorefileset', 'mmbuildgpl', 'mmsmbman', 'tsfindname', 'mmcesloadmonitor', 'mmcesobjaccess', 'mmaddcallback', 'mmcesobjpolicyfuncs', 'mmcessmbdelexport', 'msgqueueDaemonManager', 'core.snap.py', 'tsgskkm', 'mmauth', 'mmedquota', 'mmshutdown', 'tsdbmemleakparse', 'mmadquery', 'mmsdrcli', 'mmccr', 'mmcesobjchstoragepolicy', 'mmcesnfschcfg', 'tswatchmonitor', 'mmmigratefs', 'mmputacl', 'mmlscluster', 'commonsnap.py', 'mmcesservice', 'mmadddisk', 'tslsmgr', 'tssbrindex', 'mmafmlocal', 'mmlsperfdata', 'mmnfsuninstall', 'mmcmi', 'mmcesobjs3', 'tspcachescan', 'kdump-4.14.0-115.14.1.el7a.ppc64le', 'mmlsnsd', 'mmchcluster', 'mmunmount', 'mmnfsquorumloss', 'mmcesnetdeladdress', 'mmlsquota', 'mmces', 'pymmcesnfsfuncs.py', 'tsputacl', 'mmchqos', 'tsprshowfence', 'gpfsrunlevel', 'mmimgbackup', 'mmsdrrestore', 'tsqosnice', 'mmsdrserv', 'mmmsgqueue', 'mmcesmmcdelexport', 'mmlinkfileset', 'mmrestoreconfig', 'mmdelnodeclass', 'mmsmbfuncs', 'mmcesobjcfgman', 'mmfixcfg', 'mmcesnfslsexport', 'tsdbmemleak', 'mmaudit', 'mmcesnfslscfg', 'mmsmbsupportedoptions', 'mmafmconfig', 'mmlscallback', 'mmlsmgr', 'tsbackup', 'mmcesminfuncs', 'mmfsmount', 'mmcesmmcchexport', 'tsrestripefile', 'kdump', 'mmimportfs', 'mmcesobjcrring', 'mmnfs', 'mmcommon', 'mmcesnetmvaddress', 'mmsnmpagentd', 'mmcesobjfuncs', 'gui.callhome.py', 'tsbackup33', 'lxtrace', 'mmsdrfsdef', 'mmsmb', 'mmobj', 'tsprclear', 'mmceshdfsfuncs', 'mmcesnetworkmonitor', 'tspcacheutil', 'mmqos', 'mmlspolicy', 'mmrestripefs', 'mmcessmbfuncs', 'mmaddnode', 'mmblock', 'mmcrfs', 'mmmount', 'tsprreadres', 'mmnsddiscover', 'mmprotocoltrace', 'mmglobfuncs', 'tsprreadkeys', 'mmnfsdown', 'gpfs.snap', 'object.snap.py', 'mmcesnetaddaddress', 'mmcesobjchcfg', 'mmrsh', 'mmcesobjmr', 'mmeditacl', 'auditConsumerManager', 'mmlsconfig', 'mmsync', 'mmgetacl', 'mmcesuserauthrmservice', 'mmhealth', 'tsdelacl', 'mmremote', 'mmpercentencode', 'mmcloudfuncs', 'daemonize', 'mmcesnfschexport', 'tsclone', 'callhome.snap.py', 'clstrwatchreplaymanager', 'tsnetverify', 'mmstartup', 'mmcachectl', 'mmgskkm', 'mmdefragfs', 'mmsnapdir', 'tsapolicy', 'mmrcmd', 'mmexpelnode', 'mmsdrquery', 'ece.callhome.py', 'mmchdisk', 'mmcesnetdown', 'mmlslicense', 'mmrestripefile', 'mmcrfileset', 'mmnfscleanup', 'mmlogmsg', 'mmcessmbexportacl', 'mmchlicense', 'mmsetrcmd', 'tsclwatchrules', 'mmdynamicmap', 'tssetquota', 'tsprreserve', 'wftopics', 'mmvaryonvg', 'mmsnmpagentd10', 'mmbackupconfig', 'mmdefquotaon', 'mmlsattr', 'mmcesfuncs', 'mmfsadm', 'mmcesmmccrexport', 'runmmfs', 'mmafmcmd', 'ccrrestore', 'mmunlinkfileset', 'basicsnap.py', 'mmafmhomeconfig', 'auth.snap.py', 'fab3.snap.py', 'mmuserauth', 'object.callhome.py', 'mmlogsort', 'mmdf', 'mmcesobjcrstoragepolicy', 'mmdefquotaoff', 'mmtracectl', 'mmdump', 'tsprquery', 'mmfsenv', 'mmfsfuncs', 'mmrepquota', 'mmcesdr', 'mmcesnode', 'tslsquota', 'mmdsm', 'mmdelnsd', 'mmnfsinit', 'mmcrsnapshot', 'mmlockf', 'mmcesauthfuncs', 'network.callhome.py', 'mmglobfuncs.Linux', 'tsprinquiry', 'nfs.snap.py', 'mmcesnetlsaddress', 'mmapplypolicy', 'mmdumpkthreads', 'tswatchgpfsconduit', 'mmcessmbchconfig', 'perfmon.callhome.py', 'mmauditpreunmount', 'mmrcp', 'scpwrap', 'mmremotefs', 'tsunlinkfileset', 'mmcrcluster', 'mmnfspreunmount', 'mmcessmbchexport', 'tsauditconsumer', 'mmchattr', 'mmdeldisk', 'mmfsck', 'smb.snap.py', 'mmcesobjdepstoragepolicy', 'mmcheckquota', 'mmprodname', 'mmdelfs', 'mmcallhremote', 'mmgetstate', 'mmcesuserauthlsservice', 'mmcesnetup', 'mmremotecluster', 'tsstarthelper', 'mmcloudgateway', 'mmgetconfdata', 'tschpolicy', 'mmchmgr', 'mmcesnetchaddress', 'mmsmbvalidoptions', 'mmchfileset', 'mmwatch', 'tsprregister', 'mmstartpolicy', 'hadoop.snap.py', 'mmquotaoff', 'mmcesmonitor', 'mmquotaon', 'msgqueueservicesmonitormanager', 'mmlspool', 'mmlsmount', 'mmccrmonitor', 'mmbackup', 'mmlsnodeclass', 'lxtrace-4.14.0-115.14.1.el7a.ppc64le', 'mmrefresh', 'mmnfsrecovernode', 'mmpercentdecode', 'wftopichk', 'tspcachesnapdiff', 'mmdiag', 'mmlssnapshot', 'mmcesobjlsstoragepolicy', 'mmafmctl', 'mmstatdcallout', 'mmksh', 'sshscpwrap'] Path provided by --with-executables-search-path ['win32fe.exe', 'win32feutils.dll'] Bfort not found. Installing sowing for FortranStubs ================================================================================ TEST checkDependencies from config.packages.sowing(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:837) TESTING: checkDependencies from config.packages.sowing(config/BuildSystem/config/package.py:837) ================================================================================ TEST configureLibrary from config.packages.sowing(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:862) TESTING: configureLibrary from config.packages.sowing(config/BuildSystem/config/package.py:862) Find an installation and check if it can work with PETSc ================================================================================== Checking for a functional sowing Looking for SOWING at git.sowing, hg.sowing or a directory starting with ['petsc-pkg-sowing'] Could not locate an existing copy of SOWING: [] Downloading sowing =============================================================================== Trying to download git://https://bitbucket.org/petsc/pkg-sowing.git for SOWING =============================================================================== Running Executable WITHOUT threads to time it out Executing: git clone https://bitbucket.org/petsc/pkg-sowing.git /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing stdout: Cloning into '/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing'... Looking for SOWING at git.sowing, hg.sowing or a directory starting with ['petsc-pkg-sowing'] Found a copy of SOWING in git.sowing Running Executable WITHOUT threads to time it out Executing: ['git', 'rev-parse', '--git-dir'] stdout: .git Running Executable WITHOUT threads to time it out Executing: ['git', 'cat-file', '-e', 'v1.1.25-p1^{commit}'] Running Executable WITHOUT threads to time it out Executing: ['git', 'rev-parse', 'v1.1.25-p1'] stdout: bc33abe1e9818d95968d6897bfbfc35ed0c18b51 Running Executable WITHOUT threads to time it out Executing: ['git', '-c', 'user.name=petsc-configure', '-c', 'user.email=petsc@configure', 'stash'] stdout: No local changes to save Running Executable WITHOUT threads to time it out Executing: ['git', 'clean', '-f', '-d', '-x'] Running Executable WITHOUT threads to time it out Executing: ['git', 'checkout', '-f', 'bc33abe1e9818d95968d6897bfbfc35ed0c18b51'] SOWING was just downloaded, forcing a rebuild because cannot determine if package has changed =============================================================================== Running configure on SOWING; this may take several minutes =============================================================================== Running Executable WITHOUT threads to time it out Executing: ./configure --prefix=/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda stdout: checking for ranlib... ranlib checking for a BSD-compatible install... /usr/bin/install -c checking whether install works... yes checking for ar... ar checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking for c++... c++ checking whether we are using the GNU C++ compiler... yes checking whether c++ accepts -g... yes checking for virtual path format... VPATH checking for latex... /usr/bin/latex checking for gs... /usr/bin/gs checking for pnmcrop... no checking for pbmtoxbm... no checking for ppmtogif... no checking for pnmquant... no checking for perl... /usr/bin/perl checking how to run the C preprocessor... gcc -E checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking fcntl.h usability... yes checking fcntl.h presence... yes checking for fcntl.h... yes checking sys/time.h usability... yes checking sys/time.h presence... yes checking for sys/time.h... yes checking for unistd.h... (cached) yes checking pwd.h usability... yes checking pwd.h presence... yes checking for pwd.h... yes checking for stdlib.h... (cached) yes checking netdb.h usability... yes checking netdb.h presence... yes checking for netdb.h... yes checking for string.h... (cached) yes checking for an ANSI C-conforming const... yes checking for C/C++ restrict keyword... __restrict checking for uid_t in sys/types.h... yes checking for size_t... yes checking whether time.h and sys/time.h may both be included... yes checking whether struct tm is in sys/time.h or time.h... time.h checking size of void *... 8 checking size of int... 4 checking size of long... 8 checking size of long long... 8 checking for vprintf... yes checking for _doprnt... no checking for getcwd... yes checking for gethostname... yes checking for getwd... yes checking for mkdir... yes checking that mkdir accepts -p... yes checking for uname... yes checking for gethostbyname... yes checking how to run the C++ preprocessor... c++ -E checking time.h usability... yes checking time.h presence... yes checking for time.h... yes checking sys/param.h usability... yes checking sys/param.h presence... yes checking for sys/param.h... yes checking for realpath... yes checking for readlink... yes configure: creating ./config.status config.status: creating Makefile config.status: creating Makerules config.status: creating src/Makefile config.status: creating src/sys/Makefile config.status: creating src/sys/testing/Makefile config.status: creating src/tohtml/Makefile config.status: creating src/tohtml/tohtmlpath.h config.status: creating src/tohtml/testing/Makefile config.status: creating bin/pstoxbm config.status: creating bin/pstogif config.status: creating bin/bib2html config.status: creating src/bfort/Makefile config.status: creating src/bfort/testing/Makefile config.status: creating src/textfilt/Makefile config.status: creating src/doctext/Makefile config.status: creating src/doctext/docpath.h config.status: creating src/doctext/test/Makefile config.status: creating src/mapnames/Makefile config.status: creating src/bib2html/Makefile config.status: creating docs/Makefile config.status: creating docs/bfort/Makefile config.status: creating docs/doctext/Makefile config.status: creating docs/install/Makefile config.status: creating docs/tohtml/Makefile config.status: creating include/patchlevel.h config.status: creating include/textfilt/textpath.h config.status: creating include/sowingconfig.h config.status: executing bib2html commands =============================================================================== Running make on SOWING; this may take several minutes =============================================================================== Running Executable WITHOUT threads to time it out Executing: /usr/bin/gmake clean stdout: for dir in src docs ; do ( cd $dir && /usr/bin/gmake clean ) ; done gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/src' for dir in sys bfort tohtml doctext textfilt mapnames bib2html ; do ( cd $dir ; /usr/bin/gmake clean ) ; done gmake[2]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/src/sys' rm -f *.o *~ gmake[2]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/src/sys' gmake[2]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/src/bfort' /bin/rm -f *.o *~ bfort /bin/rm -f bfort\ win32/debug/* gmake[2]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/src/bfort' gmake[2]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/src/tohtml' /bin/rm -f *.o *~ tohtml tortf /bin/rm -f tohtml\ win32/debug/* (cd testing && /usr/bin/gmake clean ) gmake[3]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/src/tohtml/testing' rm -rf test[1-9] test1[0-9] test2[0-9] rm -f test[1-9].html rm -f latex.err *.hux img*.xbm img*.gif rm -f up.gif previous.gif next.gif rm -f test1[0-9].html test2[0-9].html test7a.html rm -f test[0-9].htm test[1-2][0-9].htm rm -f testf1.ps testf1.gif rm -f inplace subfiles rm -f *.ler *.aux *.out gmake[3]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/src/tohtml/testing' gmake[2]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/src/tohtml' gmake[2]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/src/doctext' /bin/rm -f *.o *~ doctext doc2lt (cd test ; if [ -s Makefile ] ; then /usr/bin/gmake clean ; fi ) gmake[3]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/src/doctext/test' rm -f *.o *~ *.3 *.2 *.html *.tex f1.cit gmake[3]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/src/doctext/test' /bin/rm -f doctext\ win32/debug/* gmake[2]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/src/doctext' gmake[2]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/src/textfilt' /bin/rm -f *.o *~ gmake[2]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/src/textfilt' gmake[2]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/src/mapnames' /bin/rm -f *.o *~ mapnames ccc test1.html test1.tex test1nc.tex test1nc.html test1.pmap gmake[2]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/src/mapnames' gmake[2]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/src/bib2html' rm -f tout.htm tout-bib.htm gmake[2]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/src/bib2html' gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/src' gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/docs' make[2]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/docs/bfort' rm -f bfort.pdf \ *.aux *.dvi *.toc *.log *.fn *.hux *.err *.blg *.bbl make[2]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/docs/bfort' make[2]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/docs/doctext' rm -f doctext.pdf \ *.aux *.dvi *.toc *.log *.fn *.hux *.err *.blg *.bbl make[2]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/docs/doctext' make[2]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/docs/install' rm -f install.pdf \ *.aux *.dvi *.toc *.log *.fn *.hux *.err *.blg *.bbl make[2]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/docs/install' make[2]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/docs/tohtml' rm -f tohtml.pdf \ *.aux *.dvi *.toc *.log *.fn *.hux *.err *.blg *.bbl make[2]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/docs/tohtml' gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/docs' /bin/rm -f lib/libsowing.a lib/libtfilter.a Running Executable WITHOUT threads to time it out Executing: /usr/bin/gmake stdout: (cd src/sys && /usr/bin/gmake ) gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/src/sys' gcc -I../../include -I../../include -c arch.c gcc -I../../include -I../../include -c txt.c gcc -I../../include -I../../include -c daytime.c gcc -I../../include -I../../include -c file.c gcc -I../../include -I../../include -c tr.c gcc -I../../include -I../../include -c getopts.c gcc -I../../include -I../../include -c rdconfig.c ar cr ../../lib/libsowing.a arch.o txt.o daytime.o file.o tr.o getopts.o rdconfig.o ranlib ../../lib/libsowing.a gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/src/sys' (cd src/tohtml && /usr/bin/gmake ) gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/src/tohtml' gcc -I../../include -I. -I../../include -c tohtml.c gcc -I../../include -I. -I../../include -c tex2html.c gcc -I../../include -I. -I../../include -c search.c gcc -I../../include -I. -I../../include -c texactio.c gcc -I../../include -I. -I../../include -c rdaux.c gcc -I../../include -I. -I../../include -c rdindx.c gcc -I../../include -I. -I../../include -c label.c gcc -I../../include -I. -I../../include -c scan.c gcc -I../../include -I. -I../../include -c refmap.c gcc -I../../include -I. -I../../include -c style.c gcc -I../../include -I. -I../../include -c dimen.c gcc -I../../include -I. -I../../include -c userdef.c gcc -I../../include -I. -I../../include -c tabular.c gcc -I../../include -I. -I../../include -c biblio.c gcc -I../../include -I. -I../../include -c environ.c gcc -I../../include -I. -I../../include -c math.c gcc -I../../include -I. -I../../include -c rddefs.c gcc -I../../include -I. -I../../include -c latexinfo.c gcc -I../../include -I. -I../../include -c accent.c gcc -I../../include -I. -I../../include -c simpleif.c gcc -o tohtml tohtml.o tex2html.o search.o texactio.o rdaux.o rdindx.o label.o scan.o refmap.o style.o dimen.o userdef.o tabular.o biblio.o environ.o math.o rddefs.o latexinfo.o accent.o simpleif.o ../../lib/libsowing.a gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/src/tohtml' (cd src/bfort && /usr/bin/gmake ) gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/src/bfort' gcc -DBASEDEF='"/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/share/bfort-base.txt"' -DBASEPATH='"/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/share"' -I../../include -I../../include -c bfort.c gcc -DBASEDEF='"/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/share/bfort-base.txt"' -DBASEPATH='"/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/share"' -I../../include -I../../include -c doc.c gcc -o bfort bfort.o doc.o ../../lib/libsowing.a gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/src/bfort' (cd src/textfilt && /usr/bin/gmake ) gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/src/textfilt' c++ -I../../include/textfilt -I../../include -I../../include -I../../include/textfilt -c cmdline.cc c++ -I../../include/textfilt -I../../include -I../../include -I../../include/textfilt -c file.cc c++ -I../../include/textfilt -I../../include -I../../include -I../../include/textfilt -c instream.cc c++ -I../../include/textfilt -I../../include -I../../include -I../../include/textfilt -c outstream.cc c++ -I../../include/textfilt -I../../include -I../../include -I../../include/textfilt -c search.cc c++ -I../../include/textfilt -I../../include -I../../include -I../../include/textfilt -c maptok.cc c++ -I../../include/textfilt -I../../include -I../../include -I../../include/textfilt -c textout.cc c++ -I../../include/textfilt -I../../include -I../../include -I../../include/textfilt -c texthtml.cc c++ -I../../include/textfilt -I../../include -I../../include -I../../include/textfilt -c textnroff.cc c++ -I../../include/textfilt -I../../include -I../../include -I../../include/textfilt -c texttex.cc c++ -I../../include/textfilt -I../../include -I../../include -I../../include/textfilt -c inutil.cc c++ -I../../include/textfilt -I../../include -I../../include -I../../include/textfilt -c errhand.cc ar cr ../../lib/libtfilter.a cmdline.o file.o instream.o outstream.o search.o maptok.o textout.o texthtml.o textnroff.o texttex.o inutil.o errhand.o ranlib ../../lib/libtfilter.a gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/src/textfilt' (cd src/doctext && /usr/bin/gmake ) gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/src/doctext' c++ -I../../include/textfilt -I../../include -I. -I../../include -c doctext.cc c++ -I../../include/textfilt -I../../include -I. -I../../include -c docutil.cc c++ -I../../include/textfilt -I../../include -I. -I../../include -c keyword.cc c++ -I../../include/textfilt -I../../include -I. -I../../include -c dotfmat.cc c++ -I../../include/textfilt -I../../include -I. -I../../include -c incfiles.cc c++ -I../../include/textfilt -I../../include -I. -I../../include -c quotefmt.cc c++ -I../../include/textfilt -I../../include -I. -I../../include -c textb.cc c++ -I../../include/textfilt -I../../include -I. -I../../include -c docfields.cc c++ -o doctext doctext.o docutil.o keyword.o dotfmat.o \ incfiles.o quotefmt.o textb.o docfields.o ../../lib/libtfilter.a c++ -I../../include/textfilt -I../../include -I. -I../../include -c doc2lt.cc c++ -o doc2lt doc2lt.o docutil.o docfields.o ../../lib/libtfilter.a gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/src/doctext' (cd src/textfilt && /usr/bin/gmake ) gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/src/textfilt' gmake[1]: Nothing to be done for `ALL'. gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/src/textfilt' (cd src/mapnames && /usr/bin/gmake ) gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/src/mapnames' c++ -I../../include/textfilt -I../../include -c mapnames.cc c++ -o mapnames mapnames.o ../../lib/libtfilter.a gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/src/mapnames' =============================================================================== Running make install on SOWING; this may take several minutes =============================================================================== Running Executable WITHOUT threads to time it out Executing: /usr/bin/gmake install stdout: /usr/bin/install -c bin/bib2html /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/bin/bib2html /usr/bin/install -c src/doctext/doctext /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/bin/doctext /usr/bin/install -c src/doctext/doc2lt /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/bin/doc2lt /usr/bin/install -c src/tohtml/tohtml /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/bin/tohtml if [ "`cd bin && pwd`" != "`cd /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/bin && pwd`" ] ; then \ /usr/bin/install -c bin/pstoxbm /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/bin/pstoxbm ; \ /usr/bin/install -c bin/pstogif /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/bin/pstogif ; \ fi /usr/bin/install -c src/bfort/bfort /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/bin/bfort /usr/bin/install -c src/mapnames/mapnames /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/bin/mapnames if [ "`cd ./share && pwd`" != "`cd /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/share && pwd`" ] ; then \ /usr/bin/install -c -m 644 ./share/pstoppm.ps /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/share/pstoppm.ps ;\ /usr/bin/install -c -m 644 ./share/basedefs.txt /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/share/basedefs.txt ;\ /usr/bin/install -c -m 644 ./share/blueball.gif /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/share/blueball.gif ;\ /usr/bin/install -c -m 644 ./share/greenball.gif /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/share/greenball.gif ;\ /usr/bin/install -c -m 644 ./share/purpleball.gif /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/share/purpleball.gif ;\ /usr/bin/install -c -m 644 ./share/redball.gif /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/share/redball.gif ;\ /usr/bin/install -c -m 644 ./share/yellowball.gif /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/share/yellowball.gif ;\ /usr/bin/install -c -m 644 ./share/next.xbm /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/share/next.xbm ;\ /usr/bin/install -c -m 644 ./share/up.xbm /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/share/up.xbm ;\ /usr/bin/install -c -m 644 ./share/previous.xbm /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/share/previous.xbm ;\ /usr/bin/install -c -m 644 ./share/next.gif /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/share/next.gif ;\ /usr/bin/install -c -m 644 ./share/up.gif /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/share/up.gif ;\ /usr/bin/install -c -m 644 ./share/previous.gif /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/share/previous.gif ;\ /usr/bin/install -c -m 644 ./share/html.def /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/share/html.def ;\ /usr/bin/install -c -m 644 ./share/latex.def /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/share/latex.def ;\ /usr/bin/install -c -m 644 ./share/nroff.def /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/share/nroff.def ;\ /usr/bin/install -c -m 644 ./share/refman.def /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/share/refman.def ;\ /usr/bin/install -c -m 644 ./share/refman.sty /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/share/refman.sty ;\ /usr/bin/install -c -m 644 ./share/doctext/html.def /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/share/doctext/html.def ;\ /usr/bin/install -c -m 644 ./share/doctext/htmlcolor.def /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/share/doctext/htmlcolor.def ;\ /usr/bin/install -c -m 644 ./share/doctext/htmltabl.def /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/share/doctext/htmltabl.def ;\ /usr/bin/install -c -m 644 ./share/doctext/htmlargtbl.def /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/share/doctext/htmlargtbl.def ;\ /usr/bin/install -c -m 644 ./share/doctext/latex.def /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/share/doctext/latex.def ;\ /usr/bin/install -c -m 644 ./share/doctext/latexargtbl.def /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/share/doctext/latexargtbl.def ;\ /usr/bin/install -c -m 644 ./share/doctext/nroff.def /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/share/doctext/nroff.def ;\ fi if [ "`cd ./man/man1 && pwd`" != "`cd /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/share/man/man1 && pwd`" ] ; then \ /usr/bin/install -c -m 644 ./man/man1/tohtml.1 /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/share/man/man1/tohtml.1 ;\ /usr/bin/install -c -m 644 ./man/man1/doctext.1 /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/share/man/man1/doctext.1 ;\ /usr/bin/install -c -m 644 ./man/man1/bfort.1 /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/share/man/man1/bfort.1 ;\ fi ********Output of running make on SOWING follows ******* checking for ranlib... ranlib checking for a BSD-compatible install... /usr/bin/install -c checking whether install works... yes checking for ar... ar checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking for c++... c++ checking whether we are using the GNU C++ compiler... yes checking whether c++ accepts -g... yes checking for virtual path format... VPATH checking for latex... /usr/bin/latex checking for gs... /usr/bin/gs checking for pnmcrop... no checking for pbmtoxbm... no checking for ppmtogif... no checking for pnmquant... no checking for perl... /usr/bin/perl checking how to run the C preprocessor... gcc -E checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking fcntl.h usability... yes checking fcntl.h presence... yes checking for fcntl.h... yes checking sys/time.h usability... yes checking sys/time.h presence... yes checking for sys/time.h... yes checking for unistd.h... (cached) yes checking pwd.h usability... yes checking pwd.h presence... yes checking for pwd.h... yes checking for stdlib.h... (cached) yes checking netdb.h usability... yes checking netdb.h presence... yes checking for netdb.h... yes checking for string.h... (cached) yes checking for an ANSI C-conforming const... yes checking for C/C++ restrict keyword... __restrict checking for uid_t in sys/types.h... yes checking for size_t... yes checking whether time.h and sys/time.h may both be included... yes checking whether struct tm is in sys/time.h or time.h... time.h checking size of void *... 8 checking size of int... 4 checking size of long... 8 checking size of long long... 8 checking for vprintf... yes checking for _doprnt... no checking for getcwd... yes checking for gethostname... yes checking for getwd... yes checking for mkdir... yes checking that mkdir accepts -p... yes checking for uname... yes checking for gethostbyname... yes checking how to run the C++ preprocessor... c++ -E checking time.h usability... yes checking time.h presence... yes checking for time.h... yes checking sys/param.h usability... yes checking sys/param.h presence... yes checking for sys/param.h... yes checking for realpath... yes checking for readlink... yes configure: creating ./config.status config.status: creating Makefile config.status: creating Makerules config.status: creating src/Makefile config.status: creating src/sys/Makefile config.status: creating src/sys/testing/Makefile config.status: creating src/tohtml/Makefile config.status: creating src/tohtml/tohtmlpath.h config.status: creating src/tohtml/testing/Makefile config.status: creating bin/pstoxbm config.status: creating bin/pstogif config.status: creating bin/bib2html config.status: creating src/bfort/Makefile config.status: creating src/bfort/testing/Makefile config.status: creating src/textfilt/Makefile config.status: creating src/doctext/Makefile config.status: creating src/doctext/docpath.h config.status: creating src/doctext/test/Makefile config.status: creating src/mapnames/Makefile config.status: creating src/bib2html/Makefile config.status: creating docs/Makefile config.status: creating docs/bfort/Makefile config.status: creating docs/doctext/Makefile config.status: creating docs/install/Makefile config.status: creating docs/tohtml/Makefile config.status: creating include/patchlevel.h config.status: creating include/textfilt/textpath.h config.status: creating include/sowingconfig.h config.status: executing bib2html commandsfor dir in src docs ; do ( cd $dir && /usr/bin/gmake clean ) ; done gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/src' for dir in sys bfort tohtml doctext textfilt mapnames bib2html ; do ( cd $dir ; /usr/bin/gmake clean ) ; done gmake[2]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/src/sys' rm -f *.o *~ gmake[2]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/src/sys' gmake[2]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/src/bfort' /bin/rm -f *.o *~ bfort /bin/rm -f bfort\ win32/debug/* gmake[2]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/src/bfort' gmake[2]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/src/tohtml' /bin/rm -f *.o *~ tohtml tortf /bin/rm -f tohtml\ win32/debug/* (cd testing && /usr/bin/gmake clean ) gmake[3]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/src/tohtml/testing' rm -rf test[1-9] test1[0-9] test2[0-9] rm -f test[1-9].html rm -f latex.err *.hux img*.xbm img*.gif rm -f up.gif previous.gif next.gif rm -f test1[0-9].html test2[0-9].html test7a.html rm -f test[0-9].htm test[1-2][0-9].htm rm -f testf1.ps testf1.gif rm -f inplace subfiles rm -f *.ler *.aux *.out gmake[3]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/src/tohtml/testing' gmake[2]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/src/tohtml' gmake[2]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/src/doctext' /bin/rm -f *.o *~ doctext doc2lt (cd test ; if [ -s Makefile ] ; then /usr/bin/gmake clean ; fi ) gmake[3]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/src/doctext/test' rm -f *.o *~ *.3 *.2 *.html *.tex f1.cit gmake[3]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/src/doctext/test' /bin/rm -f doctext\ win32/debug/* gmake[2]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/src/doctext' gmake[2]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/src/textfilt' /bin/rm -f *.o *~ gmake[2]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/src/textfilt' gmake[2]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/src/mapnames' /bin/rm -f *.o *~ mapnames ccc test1.html test1.tex test1nc.tex test1nc.html test1.pmap gmake[2]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/src/mapnames' gmake[2]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/src/bib2html' rm -f tout.htm tout-bib.htm gmake[2]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/src/bib2html' gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/src' gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/docs' make[2]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/docs/bfort' rm -f bfort.pdf \ *.aux *.dvi *.toc *.log *.fn *.hux *.err *.blg *.bbl make[2]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/docs/bfort' make[2]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/docs/doctext' rm -f doctext.pdf \ *.aux *.dvi *.toc *.log *.fn *.hux *.err *.blg *.bbl make[2]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/docs/doctext' make[2]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/docs/install' rm -f install.pdf \ *.aux *.dvi *.toc *.log *.fn *.hux *.err *.blg *.bbl make[2]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/docs/install' make[2]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/docs/tohtml' rm -f tohtml.pdf \ *.aux *.dvi *.toc *.log *.fn *.hux *.err *.blg *.bbl make[2]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/docs/tohtml' gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/docs' /bin/rm -f lib/libsowing.a lib/libtfilter.a(cd src/sys && /usr/bin/gmake ) gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/src/sys' gcc -I../../include -I../../include -c arch.c gcc -I../../include -I../../include -c txt.c gcc -I../../include -I../../include -c daytime.c gcc -I../../include -I../../include -c file.c gcc -I../../include -I../../include -c tr.c gcc -I../../include -I../../include -c getopts.c gcc -I../../include -I../../include -c rdconfig.c ar cr ../../lib/libsowing.a arch.o txt.o daytime.o file.o tr.o getopts.o rdconfig.o ranlib ../../lib/libsowing.a gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/src/sys' (cd src/tohtml && /usr/bin/gmake ) gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/src/tohtml' gcc -I../../include -I. -I../../include -c tohtml.c gcc -I../../include -I. -I../../include -c tex2html.c gcc -I../../include -I. -I../../include -c search.c gcc -I../../include -I. -I../../include -c texactio.c gcc -I../../include -I. -I../../include -c rdaux.c gcc -I../../include -I. -I../../include -c rdindx.c gcc -I../../include -I. -I../../include -c label.c gcc -I../../include -I. -I../../include -c scan.c gcc -I../../include -I. -I../../include -c refmap.c gcc -I../../include -I. -I../../include -c style.c gcc -I../../include -I. -I../../include -c dimen.c gcc -I../../include -I. -I../../include -c userdef.c gcc -I../../include -I. -I../../include -c tabular.c gcc -I../../include -I. -I../../include -c biblio.c gcc -I../../include -I. -I../../include -c environ.c gcc -I../../include -I. -I../../include -c math.c gcc -I../../include -I. -I../../include -c rddefs.c gcc -I../../include -I. -I../../include -c latexinfo.c gcc -I../../include -I. -I../../include -c accent.c gcc -I../../include -I. -I../../include -c simpleif.c gcc -o tohtml tohtml.o tex2html.o search.o texactio.o rdaux.o rdindx.o label.o scan.o refmap.o style.o dimen.o userdef.o tabular.o biblio.o environ.o math.o rddefs.o latexinfo.o accent.o simpleif.o ../../lib/libsowing.a gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/src/tohtml' (cd src/bfort && /usr/bin/gmake ) gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/src/bfort' gcc -DBASEDEF='"/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/share/bfort-base.txt"' -DBASEPATH='"/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/share"' -I../../include -I../../include -c bfort.c gcc -DBASEDEF='"/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/share/bfort-base.txt"' -DBASEPATH='"/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/share"' -I../../include -I../../include -c doc.c gcc -o bfort bfort.o doc.o ../../lib/libsowing.a gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/src/bfort' (cd src/textfilt && /usr/bin/gmake ) gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/src/textfilt' c++ -I../../include/textfilt -I../../include -I../../include -I../../include/textfilt -c cmdline.cc c++ -I../../include/textfilt -I../../include -I../../include -I../../include/textfilt -c file.cc c++ -I../../include/textfilt -I../../include -I../../include -I../../include/textfilt -c instream.cc c++ -I../../include/textfilt -I../../include -I../../include -I../../include/textfilt -c outstream.cc c++ -I../../include/textfilt -I../../include -I../../include -I../../include/textfilt -c search.cc c++ -I../../include/textfilt -I../../include -I../../include -I../../include/textfilt -c maptok.cc c++ -I../../include/textfilt -I../../include -I../../include -I../../include/textfilt -c textout.cc c++ -I../../include/textfilt -I../../include -I../../include -I../../include/textfilt -c texthtml.cc c++ -I../../include/textfilt -I../../include -I../../include -I../../include/textfilt -c textnroff.cc c++ -I../../include/textfilt -I../../include -I../../include -I../../include/textfilt -c texttex.cc c++ -I../../include/textfilt -I../../include -I../../include -I../../include/textfilt -c inutil.cc c++ -I../../include/textfilt -I../../include -I../../include -I../../include/textfilt -c errhand.cc ar cr ../../lib/libtfilter.a cmdline.o file.o instream.o outstream.o search.o maptok.o textout.o texthtml.o textnroff.o texttex.o inutil.o errhand.o ranlib ../../lib/libtfilter.a gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/src/textfilt' (cd src/doctext && /usr/bin/gmake ) gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/src/doctext' c++ -I../../include/textfilt -I../../include -I. -I../../include -c doctext.cc c++ -I../../include/textfilt -I../../include -I. -I../../include -c docutil.cc c++ -I../../include/textfilt -I../../include -I. -I../../include -c keyword.cc c++ -I../../include/textfilt -I../../include -I. -I../../include -c dotfmat.cc c++ -I../../include/textfilt -I../../include -I. -I../../include -c incfiles.cc c++ -I../../include/textfilt -I../../include -I. -I../../include -c quotefmt.cc c++ -I../../include/textfilt -I../../include -I. -I../../include -c textb.cc c++ -I../../include/textfilt -I../../include -I. -I../../include -c docfields.cc c++ -o doctext doctext.o docutil.o keyword.o dotfmat.o \ incfiles.o quotefmt.o textb.o docfields.o ../../lib/libtfilter.a c++ -I../../include/textfilt -I../../include -I. -I../../include -c doc2lt.cc c++ -o doc2lt doc2lt.o docutil.o docfields.o ../../lib/libtfilter.a gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/src/doctext' (cd src/textfilt && /usr/bin/gmake ) gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/src/textfilt' gmake[1]: Nothing to be done for `ALL'. gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/src/textfilt' (cd src/mapnames && /usr/bin/gmake ) gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/src/mapnames' c++ -I../../include/textfilt -I../../include -c mapnames.cc c++ -o mapnames mapnames.o ../../lib/libtfilter.a gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing/src/mapnames'../../lib/libsowing.a(file.o): In function `SYOpenWritableFile': file.c:(.text+0x1084): warning: the use of `mktemp' is dangerous, better use `mkstemp' ../../lib/libsowing.a(file.o): In function `SYOpenWritableFile': file.c:(.text+0x1084): warning: the use of `mktemp' is dangerous, better use `mkstemp' /usr/bin/install -c bin/bib2html /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/bin/bib2html /usr/bin/install -c src/doctext/doctext /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/bin/doctext /usr/bin/install -c src/doctext/doc2lt /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/bin/doc2lt /usr/bin/install -c src/tohtml/tohtml /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/bin/tohtml if [ "`cd bin && pwd`" != "`cd /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/bin && pwd`" ] ; then \ /usr/bin/install -c bin/pstoxbm /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/bin/pstoxbm ; \ /usr/bin/install -c bin/pstogif /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/bin/pstogif ; \ fi /usr/bin/install -c src/bfort/bfort /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/bin/bfort /usr/bin/install -c src/mapnames/mapnames /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/bin/mapnames if [ "`cd ./share && pwd`" != "`cd /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/share && pwd`" ] ; then \ /usr/bin/install -c -m 644 ./share/pstoppm.ps /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/share/pstoppm.ps ;\ /usr/bin/install -c -m 644 ./share/basedefs.txt /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/share/basedefs.txt ;\ /usr/bin/install -c -m 644 ./share/blueball.gif /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/share/blueball.gif ;\ /usr/bin/install -c -m 644 ./share/greenball.gif /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/share/greenball.gif ;\ /usr/bin/install -c -m 644 ./share/purpleball.gif /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/share/purpleball.gif ;\ /usr/bin/install -c -m 644 ./share/redball.gif /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/share/redball.gif ;\ /usr/bin/install -c -m 644 ./share/yellowball.gif /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/share/yellowball.gif ;\ /usr/bin/install -c -m 644 ./share/next.xbm /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/share/next.xbm ;\ /usr/bin/install -c -m 644 ./share/up.xbm /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/share/up.xbm ;\ /usr/bin/install -c -m 644 ./share/previous.xbm /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/share/previous.xbm ;\ /usr/bin/install -c -m 644 ./share/next.gif /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/share/next.gif ;\ /usr/bin/install -c -m 644 ./share/up.gif /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/share/up.gif ;\ /usr/bin/install -c -m 644 ./share/previous.gif /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/share/previous.gif ;\ /usr/bin/install -c -m 644 ./share/html.def /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/share/html.def ;\ /usr/bin/install -c -m 644 ./share/latex.def /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/share/latex.def ;\ /usr/bin/install -c -m 644 ./share/nroff.def /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/share/nroff.def ;\ /usr/bin/install -c -m 644 ./share/refman.def /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/share/refman.def ;\ /usr/bin/install -c -m 644 ./share/refman.sty /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/share/refman.sty ;\ /usr/bin/install -c -m 644 ./share/doctext/html.def /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/share/doctext/html.def ;\ /usr/bin/install -c -m 644 ./share/doctext/htmlcolor.def /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/share/doctext/htmlcolor.def ;\ /usr/bin/install -c -m 644 ./share/doctext/htmltabl.def /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/share/doctext/htmltabl.def ;\ /usr/bin/install -c -m 644 ./share/doctext/htmlargtbl.def /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/share/doctext/htmlargtbl.def ;\ /usr/bin/install -c -m 644 ./share/doctext/latex.def /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/share/doctext/latex.def ;\ /usr/bin/install -c -m 644 ./share/doctext/latexargtbl.def /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/share/doctext/latexargtbl.def ;\ /usr/bin/install -c -m 644 ./share/doctext/nroff.def /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/share/doctext/nroff.def ;\ fi if [ "`cd ./man/man1 && pwd`" != "`cd /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/share/man/man1 && pwd`" ] ; then \ /usr/bin/install -c -m 644 ./man/man1/tohtml.1 /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/share/man/man1/tohtml.1 ;\ /usr/bin/install -c -m 644 ./man/man1/doctext.1 /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/share/man/man1/doctext.1 ;\ /usr/bin/install -c -m 644 ./man/man1/bfort.1 /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/share/man/man1/bfort.1 ;\ fi********End of Output of running make on SOWING ******* Not checking for library in Download SOWING: [] because no functions given to check for ================================================================================ TEST check from config.libraries(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/libraries.py:157) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:157) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names No functions to check for in library [] [] Checking for optional headers [] in Download SOWING: ['/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/include'] ================================================================================ TEST checkInclude from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files [] in ['/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/include'] Found header files [] in ['/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/include'] Checking for headers [] in Download SOWING: ['/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/include'] ================================================================================ TEST checkVersion from config.packages.sowing(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:986) TESTING: checkVersion from config.packages.sowing(config/BuildSystem/config/package.py:986) Uses self.version, self.minversion, self.maxversion, self.versionname, and self.versioninclude to determine if package has required version For sowing unable to find version information since includes and version includes are missing skipping version check ================================================================================ TEST checkSharedLibrary from config.packages.sowing(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:920) TESTING: checkSharedLibrary from config.packages.sowing(config/BuildSystem/config/package.py:920) By default we don't care about checking if the library is shared Checking for program /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/bin/bfort...found Defined make macro "BFORT" to "/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/bin/bfort" Checking for program /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/bin/doctext...found Defined make macro "DOCTEXT" to "/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/bin/doctext" Checking for program /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/bin/mapnames...found Defined make macro "MAPNAMES" to "/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/bin/mapnames" Checking for program /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/bin/bib2html...found Defined make macro "BIB2HTML" to "/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/bin/bib2html" Running Executable WITHOUT threads to time it out Executing: /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/bin/bfort -version stdout: bfort (sowing) release 1.1.25 of $Date: 2006-02-20 14:58:34 $ Running /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/bin/bfort to generate fortran stubs child config.packages.sowing 37.486365 ================================================================================ TEST alternateConfigureLibrary from config.packages.revolve(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.revolve(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.revolve 0.001125 ================================================================================ TEST alternateConfigureLibrary from config.packages.radau5(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.radau5(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.radau5 0.000746 ================================================================================ TEST alternateConfigureLibrary from config.packages.pami(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.pami(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.pami 0.000655 ================================================================================ TEST alternateConfigureLibrary from config.packages.opengles(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.opengles(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.opengles 0.000646 ================================================================================ TEST alternateConfigureLibrary from config.packages.opencl(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.opencl(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.opencl 0.000641 ================================================================================ TEST alternateConfigureLibrary from config.packages.muparser(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.muparser(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.muparser 0.000729 Defined "PYTHON_EXE" to ""/usr/bin/python"" Running Executable WITHOUT threads to time it out Executing: /usr/bin/python -c "import Cython" Running Executable WITHOUT threads to time it out Executing: /usr/bin/python -c "import numpy" child config.packages.python 0.046017 ================================================================================ TEST alternateConfigureLibrary from config.packages.petsc4py(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/packages/petsc4py.py:97) TESTING: alternateConfigureLibrary from config.packages.petsc4py(config/BuildSystem/config/packages/petsc4py.py:97) Defined make rule "petsc4py-build" with dependencies "" and code [] Defined make rule "petsc4py-install" with dependencies "" and code [] child config.packages.petsc4py 0.002071 ================================================================================ TEST alternateConfigureLibrary from config.packages.mpi4py(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/packages/mpi4py.py:74) TESTING: alternateConfigureLibrary from config.packages.mpi4py(config/BuildSystem/config/packages/mpi4py.py:74) Defined make rule "mpi4py-build" with dependencies "" and code [] Defined make rule "mpi4py-install" with dependencies "" and code [] child config.packages.mpi4py 0.001628 ================================================================================ TEST alternateConfigureLibrary from config.packages.mpe(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.mpe(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.mpe 0.000756 ================================================================================ TEST alternateConfigureLibrary from config.packages.memkind(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.memkind(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.memkind 0.000658 ================================================================================ TEST alternateConfigureLibrary from config.packages.libmesh(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/packages/libmesh.py:76) TESTING: alternateConfigureLibrary from config.packages.libmesh(config/BuildSystem/config/packages/libmesh.py:76) Defined make rule "libmesh-build" with dependencies "" and code [] Defined make rule "libmesh-install" with dependencies "" and code [] child config.packages.libmesh 0.001584 ================================================================================ TEST alternateConfigureLibrary from config.packages.moose(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.moose(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.moose 0.000694 ================================================================================ TEST alternateConfigureLibrary from config.packages.libjpeg(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.libjpeg(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.libjpeg 0.000742 ================================================================================ TEST alternateConfigureLibrary from config.packages.libceed(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.libceed(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.libceed 0.000743 Checking for program /sw/sources/lsf-tools/2.0/summit/bin/lgrind...not found Checking for program /sw/summit/xalt/1.2.0/bin/lgrind...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/bin/lgrind...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/cmake-3.15.2-xit2o3iepxvqbyku77lwcugufilztu7t/bin/lgrind...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/bin/lgrind...not found Checking for program /sw/summit/forge/20.0.1/bin/lgrind...not found Checking for program /sw/summit/cuda/10.1.243/bin/lgrind...not found Checking for program /opt/ibm/spectrumcomputing/lsf/10.1.0.9/linux3.10-glibc2.17-ppc64le-csm/bin/lgrind...not found Checking for program /usr/bin/lgrind...not found Checking for program /usr/sbin/lgrind...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/darshan-runtime-3.1.7-cnvxicgf5j4ap64qi6v5gxp67hmrjz43/bin/lgrind...not found Checking for program /sw/sources/hpss/bin/lgrind...not found Checking for program /opt/ibm/spectrumcomputing/lsf/10.1.0.9/linux3.10-glibc2.17-ppc64le-csm/etc/lgrind...not found Checking for program /opt/ibm/csm/bin/lgrind...not found Checking for program /usr/local/bin/lgrind...not found Checking for program /usr/local/sbin/lgrind...not found Checking for program /opt/ibm/flightlog/bin/lgrind...not found Checking for program /opt/ibutils/bin/lgrind...not found Checking for program /opt/ibm/spectrum_mpi/jsm_pmix/bin/lgrind...not found Checking for program /opt/puppetlabs/bin/lgrind...not found Checking for program /usr/lpp/mmfs/bin/lgrind...not found Checking for program /ccs/home/adams/petsc_install/lib/petsc/bin/win32fe/lgrind...not found Unable to find programs ['lgrind'] providing listing of each search directory to help debug Path provided in Python program Path provided by default path ['bsub', 'bjob', 'showusage'] ['mpirun', 'ibrun', 'ibrun.symm', 'aprun', 'jsrun', 'ld', 'xalt_helper_functions.sh'] ['shmemrun', 'profile2mat.pl', 'oshrun', 'oshmem_info', 'orterun', 'orted', 'orte-server', 'orte-info', 'orte-clean', 'ompi_info', 'ompi-server', 'ompi-clean', 'mpitool', 'mpirun', 'mpijob', 'mpiexec', 'jumpshot', 'get_nl_setting', 'efix', 'alias.pl', 'aggregate_profile.pl', 'stock', 'shmemfort', 'shmemcxx', 'shmemcc', 'shmemc++', 'shmemCC', 'oshfort', 'oshcxx', 'oshcc', 'oshc++', 'oshCC', 'ortecc', 'opal_wrapper', 'mpixlf', 'mpixlc', 'mpixlC', 'mpipgifort', 'mpipgicc', 'mpipgic++', 'mpifort', 'mpif90', 'mpif77', 'mpicxx', 'mpicc', 'mpic++', 'mpiCC', 'mpip-jsrun'] ['ccmake', 'cmake', 'ctest', 'cpack'] ['localrc', 'pgaccelerror', 'pgimport', 'pgacclnk', 'pgaccelinfo', 'pgnvd', 'pgexplain.xml', 'pgunzip', 'pgzip', 'pgsize', 'pgipa', 'pgicg', 'pgextract', 'pgappend', 'pgprepro', 'pgcpuid', 'pgprofrc', 'pgprof', 'pgf901-llvm_ex', 'pgf901-llvm', 'pgf90-llvm_ex', 'pgf902-llvm', 'pggpp2ex-llvm', 'pggpp2-llvm', 'pggpp1-llvm', 'pggdecode', 'pgc-llvm_ex', 'pgc-llvm', 'pgfortran', 'pgf90', 'pgc++', 'pgcc18', 'pgcc11', 'pgcc', 'pgnvvm', 'makelocalrc', 'pgnvdlinpowerrc', 'pgnvd64rc', 'pgnvdrc', '.pgnvdrc', 'acclinuxpower64rc', 'acc1rc', 'versionrc', 'powerversionrc', 'c++llvmrc', 'pgllvmrc', 'llvmrc', 'linpoweriparc', 'noiparc', 'iparc', 'pgftnrc', 'pgf90linpowerrc', 'pgc++linpowerrc', 'pgcclinpowerrc', 'linpowerrc', 'powerrc', 'cpprc', 'ccrc', 'fnativerc', 'nativerc', '.pgfortranrc', '.pgf90rc', '.pgc++rc', '.pgcc18rc', '.pgcc11rc', '.pgccrc', 'siterc'] ['ddt-debugger-mps', 'ddt', 'ddt-debugger', 'allinea-client', 'ddt-mpirun', 'forge-probe', 'forge', 'make-profiler-libraries', 'ddt-debugger-ll', 'map', 'ddt-client'] ['cuobjdump', 'cuda-gdb', 'cuda-gdbserver', 'gpu-library-advisor', 'cuda-memcheck', 'nsight', 'nsight_ee_plugins_manage.sh', 'nv-nsight-cu-cli', 'bin2c', 'crt', 'cudafe++', 'fatbinary', 'nvcc', 'nvcc.profile', 'nvlink', 'ptxas', 'nvdisasm', 'nvprof', 'nvprune', 'computeprof', 'nvvp', 'cuda-install-samples-10.1.sh'] ['brsvjob', 'lspasswd', 'bmgroup', 'bpost', 'btop', 'bclusters', 'lsplace', 'bjdepinfo', 'lsreghost', 'brsvs', 'bparams', 'bgadd', 'lsrun', 'lsload', 'breconfig', 'lsfrestart', 'bconf', 'bmod', 'bsub', 'lsunlockhost', 'bmodify', 'bread', 'bacct', 'lsfrsv', 'lsgrun', 'bslots', 'bapp', 'bjobs', 'lsmail', 'lsfstartup', 'lsmake4', 'lslockhost', 'lsfshutdown', 'bpeek', 'lsrun.sh', 'lslogin', 'bimages', 'bchkpnt', 'bwait', 'lsfhadoop.sh', 'bsla', 'brsvmod', 'lsrtasks', 'blimits', 'busers', 'bresources', 'bqueues', 'brequeue', 'bmg', 'lsrcp', 'lseligible', 'lshosts', 'lsloadadj', 'breboot', 'lsacct', 'lsclusters', 'bugroup', 'lsltasks', 'lsadmin', 'bstatus', 'bgbroker', 'bgdel', 'bentags', 'lsportcheck', 'brsvsub', 'lsf-start-spark.sh', 'bqc', 'bhpart', 'lsf-spark-shell.sh', 'lsmakerm', 'lsf-spark-submit.sh', 'brestart', 'bswitch', 'bjgroup', 'lsreconfig', 'lammpirun_wrapper', 'lsf-stop-spark.sh', 'badmin', 'bbot', 'bstop', 'lsinfo', 'brun', 'bhist', 'bhosts', 'bgmod', 'brsvadd', 'bkill', 'brlainfo', 'brsvdel', 'xagent', 'bresize', 'bmig', 'lsmon', 'lsid', 'bgpinfo', 'lsmake', 'bresume', 'blaunch', 'lsacctmrg'] ['sview', 'strigger', 'sstat', 'sshare', 'srun', 'sreport', 'squeue', 'sprio', 'smap', 'sinfo', 'sgather', 'sdiag', 'scontrol', 'scancel', 'sbcast', 'sbatch', 'sattach', 'salloc', 'sacctmgr', 'sacct', 'qsub', 'tracejob', 'qterm', 'qstop', 'qstat', 'qstart', 'qsig', 'qselect', 'qrun', 'qrls', 'qrerun', 'qorder', 'qnodes', 'qmsg', 'qmove', 'qmgr', 'qhold', 'qgpureset', 'qgpumode', 'qenable', 'qdisable', 'qdel', 'qchkpt', 'qalter', 'printtracking', 'printserverdb', 'printjob', 'pbsnodes', 'pbsdsh', 'pbs_track', 'nqs2pbs', 'hostn', 'chk_tree', 'jobsub', 'jobstat', 'ctags', 'diffstat', 'rpmsign', 'swig', 'ccache-swig', 'ocs', 'cscope-indexer', 'cscope', 'doxygen', 'unwrapdiff', 'splitdiff', 'rediff', 'recountdiff', 'lsdiff', 'interdiff', 'grepdiff', 'flipdiff', 'fixcvsdiff', 'filterdiff', 'espdiff', 'editdiff', 'dehtmldiff', 'combinediff', 'yacc', 'byacc', 'indent', 'rlog', 'rcsmerge', 'rcsfreeze', 'rcsdiff', 'rcsclean', 'rcs', 'merge', 'ident', 'co', 'ci', 'svnversion', 'svnsync', 'svnserve', 'svnrdump', 'svnlook', 'svndumpfilter', 'svnadmin', 'svn', 'intltoolize', 'intltool-update', 'intltool-prepare', 'intltool-merge', 'intltool-extract', 'gettextize', 'autopoint', 'stap-report', 'stapsh', 'staprun', 'stap-merge', 'stap-prep', 'stap', 'screen', 'rhn_register', 'whiptail', 'subscription-manager', 'rhsmcertd', 'rhsm-debug', 'rct', 'consolehelper', 'pyinotify', 'easy_install-2.7', 'easy_install', 'snmpwalk', 'snmpvacm', 'snmpusm', 'snmptrap', 'snmptranslate', 'snmptls', 'snmptest', 'snmptable', 'snmpstatus', 'snmpset', 'snmpnetstat', 'snmpinform', 'snmpgetnext', 'snmpget', 'snmpdf', 'snmpdelta', 'snmpbulkwalk', 'snmpbulkget', 'encode_keychange', 'chardetect', 'atopsar', 'atopd', 'atopconvert', 'atop', 'abrt-dump-oops', 'abrt-action-save-kernel-data', 'abrt-action-analyze-oops', 'abrt-action-trim-files', 'abrt-action-perform-ccpp-analysis', 'abrt-action-list-dsos', 'abrt-action-install-debuginfo', 'abrt-action-generate-core-backtrace', 'abrt-action-generate-backtrace', 'abrt-action-analyze-vulnerability', 'abrt-action-analyze-core', 'abrt-action-analyze-ccpp-local', 'abrt-action-analyze-c', 'abrt-action-analyze-backtrace', 'abrt-watch-log', 'abrt-handle-upload', 'abrt-action-save-package-data', 'abrt-action-notify', 'abrt-action-analyze-xorg', 'reporter-ureport', 'reporter-rhtsupport', 'libtar', 'satyr', 'orig', 'git', 'git-receive-pack', 'git-upload-archive', 'git-upload-pack', 'git-shell', 'lex', 'tset', 'pk12util', 'as', 'lpr.cups', 'speaker-test', 'manpath', 'hwloc-gather-topology', 'hwloc-calc', 'rev', 'snmpconf', 'sctp_darn', 'trust', 'nm', 'fc-pattern', 'ucs2any', 'zforce', 'groups', 'gunzip', 'tracepath', 'rdma_xclient', 'unalias', 'db_upgrade', 'dbus-uuidgen', 'uuidgen', 'uname', 'df', 'fc-match', 'evim', 'schemagen', 'sessreg', 'rdoc', 'gdbus-codegen', 'perl', 'perl5.16.3', 'egrep', 'mlxcables', 'recode-sr-latin', 'pkcheck', 'GET', 'rvim', 'addr2line', 'gsdj500', 'rpmbuild', 'amixer', 'unexpand', 'ypchsh', 'yppasswd', 'ypchfn', 'install', 'cancel.cups', 'msggrep', 'mwm', 'gcc-nm', 'remunge', 'ibgenperm', 'thumbpdf', 'nsenter', 'clean-binary-files', 'httpcfg', 'mlnx_dump_parser', 'ghci', 'autoexpect', 'ntpstat', 'texluac', 'dtestsrq', 'lz4cat', 'pkttyagent', 'python2', 'pkla-admin-identities', 'hpc', 'tail', 'size', 'fc-query', 'mkluatexfontdb', 'dbus-cleanup-sockets', 'nisdomainname', 'ldapurl', 'xsd', 'startx', 'crash', 'mcdiff', 'make', 'gslp', 'mktexfmt', 'pmafm', 'xdg-desktop-icon', 'ldappasswd', 'csh', 'printenv', 'vncconfig', 'wqdump_ext', 'gendiff', 'mst_cable', 'X', 'mstvpd', 'zmore', 'db_hotbackup', 'signver', 'systemctl', 'amsvis', 'tbl', 'xmessage', 'servertool', 'sn', 'embedspu', 'rview', 'nohup', 'grops', 'geoipupdate', 'xfd', 'rm', 'infotocap', 'pwscore', 'eu-objdump', 'mysql', 'mailq.postfix', 'ptx', 'systemd-loginctl', 'mstop', 'rxe_cfg', 'ar', 'ccrewrite', 'diff-jars', 'python', 'pmsocks', 'migspeed', 'xmbind', 'objcopy', 'alias', 'dos2unix', 'ca-legacy', 'tclsh', 'ofed_rpm_info', 'hwloc-assembler-remote', 'vimtutor', 'lprm', 'pygtk-demo', 'jjs', 'prtstat', 'seq', 'col', 'pdcp', 'eu-strip', 'ib_acme', 'resourcedump', 'dirname', 'fc-cache-64', 'lesskey', 'date', 'basename', 'grep', 'geoiplookup6', 'ssh-copy-id', 'xterm', 'svcutil', 'libpng-config', 'dvilualatex', 'db_load', 'systemd-notify', 'dracut', 'texconfig', 'haddock', 'xrandr', 'umount', 'xdg-mime', 'prlimit', 'ucx_info', 'infokey', 'pstree.x11', 'mono-test-install', 'write', 'geqn', 'xdg-screensaver', 'glib-mkenums', 'sudoedit', 'mst', 'ghc-pkg-7.6.3', 'wall', 'dgawk', 'ibv_polldcinfo', 'ppc64le-redhat-linux-gcc', 'gcc', 'xzcat', 'simpdftex', 'cvsbug', 'pdflatex', 'mlxburn', 'ping', 'column', 'fc-cache', 'pinentry-curses', 'pmlogextract', 'scp', 'stdbuf', 'mlxcables_ext', 'renice', 'file', 'raw_ethernet_bw', 'msguniq', 'appletviewer', 'pdf2dsc', 'mlxpci', 'dig', 'gem', 'coredumpctl', 'eu-size', 'conjure', 'mlnx_conf_mgr.sh', 'alsaunmute', 'command', 'cd', 'sha1sum', 'xsltproc', 'hp2ps', 'erb', 'update-desktop-database', 'gtk-update-icon-cache', 'crontab', 'icewm', 'mktexmf', 'whoami', 'ttmkfdir', 'uxterm', 'ucx_perftest', 'ibcongest', 'mlnx_perf', 'funzip', 'ghc', 'pkg-config', 'nvidia-persistenced', 'unzipsfx', 'bootctl', 'fc-conflist', 'pango-querymodules-64', 'splain', 'curl', 'arch', 'xinit', 'pfbtopfa', 'mozroots', 'setsid', 'setterm', 'gr2fonttest', 'wqdump', 'gzexe', 'gtk-launch', 'compare', 'aseqdump', 'cc', 'nvidia-debugdump', 'icesh', 'udevadm', 'lc', 'icehelp', 'gvimdiff', 'taskset', 'xml2-config', 'pkill', 'bzmore', 'mogrify', 'systemd-analyze', 'mkdir', 'lpq.cups', 'libpng15-config', 'mc', 'repstopdf', 'ld', 'ld.bfd', 'systemd-sysv-convert', 'nproc', 'dbpmda', 'cksum', 'psed', 's2p', 'msghack', 'tabs', 'systemd-coredumpctl', 'jmap', 'libtoolize', 'etags.emacs', 'gtester', 'pmie', 'fg', 'ps2pdfwr', 'peekfd', 'ib_atomic_bw', 'preconv', 'dtestx', 'aria_dump_log', 'gpg-error', 'pmtrace', 'allec', 'post-grohtml', 'tree', 'net-snmp-create-v3-user', 'bunzip2', 'zcat', 'xzless', 'lscpu', 'xzmore', 'udaddy', 'alsamixer', 'find2perl', 'dtestcm', 'iconv', 'rpm2cpio', 'desktop-file-edit', 'ps2pdf13', 'ldapexop', 'hwloc-assembler', 'rpmquery', 'ibv_umr', 'chown', 'pdsh', 'gcc-ar', 'pdb2mdb', 'unshare', 'db_replicate', 'nsupdate', 'cpio', 'xmvn-builddep', 'comm', 'dbus-monitor', 'automake-1.13', 'automake', 'eu-stack', 'runghc-7.6.3', 'xgettext', 'chsh', 'eqn', 'gdb', 'lualatex', 'cpupower', 'build-jar-repository', 'gacutil2', 'gawk', 'rftp', 'kpsewhere', 'c99', 'nvidia-smi', 'reset', 'xdg-open', 'zip', 'split', 'mlx_fpga_ext', 'catchsegv', 'ghc-7.6.3', 'keytool', 'aria_chk', 'mlxreg', 'mstregdump', 'alsaucm', 'mlxlink', 'rename', 'chktrust', 'true', 'db_recover', 'mktexlsr', 'xpr', 'skill', 'otflist', 'gfortran', 'gtroff', 'uil', 'jvmjar', 'zgrep', 'elfedit', 'xclipboard', 'passwd', 'prove', 'eu-nm', 'openssl', 'su', 'kibitz', 'kpsestat', 'pgrep', 'printf', 'gtbl', 'ib_read_lat', 'zipdetails', 'gtar', 'jarsigner', 'mysql_find_rows', 'fold', 'gconf-merge-tree', 'munge', 'ln', 'tty', 'uuclient', 'stat', 'chfn', 'find-jar', 'wish', 'pmdiff', 'mkocp', 'lchsh', 'jconsole', 'luit', 'diff', 'rpmdb', 'gcore', 'rsync', 'fc-list', 'dmesg', 'libtool', 'mkfontscale', 'zsoelim', 'mstmcra', 'pod2usage', 'xjc', 'uptime', 'dump2slvl.pl', 'ldapwhoami', 'testrb', 'alsatplg', 'setarch', 'dbus-test-tool', 'msgfmt', 'alsa-delay', 'gview', 'texconfig-dialog', 'ps2pdf14', 'cairo-sphinx', 'sctp_test', 'ps2epsi', 'pmlogconf', 'dwz', 'amidi', 'updmap-sys', 'compile_et', 'man', 'cmp', 'hostnamectl', 'dd', 'tmon', 'vdir', 'pldd', 'sctp_status', 'iceauth', 'getfacl', 'xrdb', 'runhaskell-ghc', 'udpong', 'hwloc-distances', 'sh', 'db_stat', 'ib_write_bw', 'fmt', 'fc-validate', 'mcs', 'ibv_cc_pingpong', 'base64', 'ibv_devinfo', 'ibv_xsrq_pingpong', 'mlxreg_ext', 'sqlite3', 'ps2ps2', 'dapltest', 'tar', 'head', 'ps2pdf', 'ri', 'serialver', 'script', 'pstree', 'msgcomm', 'finger', 'fallocate', 'xzdec', 'whatis', 'gencat', 'perlthanks', 'perlbug', 'xconsole', 'xclock', 'wsdl', 'mlxtrace', 'aclocal', 'aclocal-1.13', 'red', 'readlink', 'unix2mac', 'vim', 'zegrep', 'certutil', 'hwloc-info', 'xinput', 'hwloc-distrib', 'gzip', 'ypcat', 'localedef', 'emacs', 'pmlogsummary', 'mlnx_interface_mgr.sh', 'mysql_config', 'gpgsplit', 'zipinfo', 'unzip', 'updatedb', 'idn', 'systemd-run', 'pwd', 'mailx', 'xzdiff', 'db_dump185', 'wish8.5', 'ibv_devices', 'ls', 'mcedit', 'iptables-xml', 'db_dump', 'unlz4', 'xdg-icon-resource', 'arecord', 'kernel-install', 'otftobdf', 'sqlmetal', 'mysqlslap', 'lp', 'dbus-run-session', 'xcursorgen', 'mremote', 'gsbj', 'ldapadd', 'unpigz', 'pigz', 'ed', 'gss-client', 'ibdiagm.sh', 'm4', 'systemd-path', 'kpsetool', 'cal', 'raw_ethernet_burst_lat', 'mpi-selector', 'lprsetup.sh', 'rvi', 'mono', 'xrefresh', 'zipsplit', 'lp.cups', 'batch', 'mysqladmin', 'ib_write_lat', 'ldapcompare', 'lprm.cups', 'which', 'msginit', 'oldfind', 'toe', 'unlink', 'lz4c', 'ppc64le-redhat-linux-g++', 'c++', 'g++', 'ppc64le-redhat-linux-c++', 'montage', 'ghostscript', 'diff3', 'run-singularity', 'dcgmi', 'ibdiagpath', 'pmfind', 'free', 'ghc-doc-index', 'gpg-zip', 'tcsh', 'mconfig', 'gpgv2', 'jdb', 'pmpython', 'allneeded', 'icewmhint', 'pinky', 'rmid', 'ebrowse', 'lsblk', 'xmlwf', 'memhog', 'ruby', 'eu-findtextrel', 'dislocate', 'vncviewer', 'less', 'ibdev2netdev', 'lsmem', 'systemd-ask-password', 'kpsereadlink', 'lstopo-no-graphics', 'bzcat', 'python2-config', 'cat', 'ngettext', 'gtk-query-immodules-3.0-64', 'apropos', 'dimax_init', 'icewmtray', 'linux64', 'mstcongestion', 'gdb-add-index', 'who', 'dviluatex', 'xwud', 'pstack', 'ldapmodrdn', 'bzgrep', 'ucx_read_profile', 'ionice', 'bison', 'rmic', 'mktexpk', 'ppc32', 'ranlib', 'jhat', 'slabtop', 'x11perf', 'systemd-cgtop', 'wait', 'catman', 'xauth', 'systemd-cat', 'cancel', 'bg', 'env', 'xkill', 'pmlc', 'numactl', 'tnameserv', 'pmdbg', 'at', 'convert', 'Xvnc', 'flint_ext', 'strings', 'soapsuds', 'gstack', 'msgcmp', 'mkofm', 'ssh-keygen', 'sdiff', 'HEAD', 'ib_send_lat', 'mkfontdir', 'pgawk', 'mysqlbinlog', 'lppasswd', 'dbus-daemon', 'emacs-24.3', 'nroff', 'locate', 'setup-nsssysinit.sh', 'igawk', 'mlx_fs_dump', 'gsdj', 'tic', 'lsinitrd', 'weather', 'gcov', 'mono-boehm', 'patch', 'sudo', 'ib_read_bw', 'info', 'dump2psl.pl', 'xsetmode', 'jrunscript', 'kdumpctl', 'lslocks', 'gnroff', 'shuf', 'vmstat', 'latex', 'lslogins', 'lua', 'flex++', 'ssh-keyscan', 'mlxtrace_ext', 'msgattrib', 'signtool', 'rpmverify', 'getent', 'pmieconf', 'ssh-agent', 'xdg-desktop-menu', 'ibdmchk', 'ibnetsplit', 'link', 'gpg-agent', 'pmlogcheck', 'mlxlink_ext', 'dbus-update-activation-environment', 'bc', 'nice', 'raw', 'mlxgearbox', 'pmevent', 'riostream', 'wftopfa', 'aserver', 'mget_temp', 'javadoc', 'unxz', 'ib_send_bw', 'cpp', 'desktop-file-install', 'checksctp', 'ucmatose', 'gpg', 'jsadebugd', 'kpsewhich', 'aria_read_log', 'whereis', 'systemd-tty-ask-password-agent', 'pmerr', 'mysqldump', 'mstfwtrace', 'java', 'dvi2fax', 'ibv_intf', 'tzselect', 'ibv_dctgt', 'fmtutil', 'gsoelim', 'chmem', 'ssh', 'mstmtserver', 'wsdl2', 'pmdate', 'modutil', 'vncserver', 'pmval', 'pmstore', 'systemd-stdio-bridge', 'paste', 'xdg-email', 'POST', 'pod2text', 'gacutil', 'setpriv', 'mandb', 'lsattr', 'tracepath6', 'xwd', 'rdma_server', 'desktop-file-validate', 'mget_temp_ext', 'nvidia-modprobe', 'truncate', 'numfmt', 'mlnx_qos', 'xbiff', 'ppc64', 'lwp-request', 'xgamma', 'rmail', 'mkfifo', 'luac', 'hsc2hs-ghc', 'texconfig-sys', 'systemd-detect-virt', 'secon', 'rebuild-jar-repository', 'sim_client', 'h2ph', 'pminfo', 'f95', 'bashbug-64', 'mktemp', 'gneqn', 'sum', 'unbuffer', 'newgrp', 'mlxfwmanager', 'allcm', 'usleep', 'etags', 'ikdasm', 'mac2unix', 'sha384sum', 'wsimport', 'hwloc-patch', 'ofed_info', 'cvtsudoers', 'krb5-config', 'mstfwreset', 'pdfetex', 'dir', 'sprof', 'run_perftest_multi_devices', 'cp', 'ypwhich', 'xset', 'jstack', 'sxpm', 'pmclient', 'chattr', 'run-parts', 'mstconfig', 'gapplication', 'extcheck', 'mlxvpd', 'ghc-pkg', 'eu-elfcompress', 'fribidi', 'fc', 'x11perfcomp', 'logger', 'watchgnupg', 'dtest', 'xeyes', 'csslint-0.6', 'timeout', 'makedb', 'ibdump', 'chcon', 'aconnect', 'ib_atomic_lat', 'stream', 'icewm-xdg-menu', 'runhaskell', 'msgunfmt', 'lexgrog', 'lsipc', 'expect', 'bashbug', 'xz', 'fmtutil-sys', 'gettext.sh', 'glib-compile-schemas', 'pmstat', 'javah', 'ipcmk', 'pstruct', 'c2ph', 'mtserver', 'luatex', 'cert-sync', 'mlxmdio', 'rdma_xserver', 'pmlogger', 'mountpoint', 'eu-ranlib', 'rmdir', 'hostname', 'pmap', 'ipcalc', 'zipnote', 'lwp-dump', 'pdf2ps', 'gpasswd', 'animate', 'zsh', 'python-config', 'db_deadlock', 'vpi_tcpdump', 'jcmd', 'migratepages', 'resize', 'showrgb', 'captoinfo', 'pax', 'rstream', 'jps', 'ps', 'systemd-cgls', 'db_tuner', 'systemd-inhibit', '[', 'ul', 'snice', 'rpmspec', 'wc', 'pod2html', 'timed-read', 'ibdiagnet', 'lwp-download', 'haddock-ghc-7.6.3', 'cmsutil', 'updmap', 'xvidtune', 'last', 'mlxprivhost', 'top', 'pmdumplog', 'scriptreplay', 'urlgrabber', 'mstprivhost', 'quotasync', 'chgrp', 'touch', 'neqn', 'fc-cat', 'xmag', 'msgen', 'pack200', 'mount', 'md5sum', 'sudoreplay', 'ps2ps', 'gmake', 'autom4te', 'dircolors', 'sha256sum', 'pre-grohtml', 'tsort', 'getconf', 'eu-elflint', 'texlua', 'db_log_verify', 'fc-scan', 'getopt', 'pmie2col', 'vi', 'tload', 'ibv_task_pingpong', 'atrm', 'gettext', 'dc', 'db_archive', 'rdma_client', 'xorg-x11-fonts-update-dirs', 'fonttosfnt', 'etex', 'pf2afm', 'aplaymidi', 'mcookie', 'jar', 'nslookup', 'setxkbmap', 'ipmitool', 'mlxdump', 'hwloc-ls', 'realpath', 'ps2ascii', 'ksh', 'mlxmcg', 'pdftex', 'lpstat', 'read', 'dbus-send', 'perldoc', 'pkcs1-conv', 'jdeps', 'jstatd', 'kpsexpand', 'lwp-mirror', 'mailq', 'gnuplot', 'kpsepath', 'sort', 'grep-changelog', 'fgrep', 'eu-readelf', 'numastat', 'shcomp', 'sync', 'flock', 'timed-run', 'cvt', 'rpm', 'composite', 'autoheader', 'setfacl', 'db_printlog', 'db_verify', 'zcmp', 'expand', 'kpseaccess', 'xmllint', 'csplit', 'bdftopcf', 'ypdomainname', 'soelim', 'podselect', 'kmod', 'mono-heapviz', 'alsaloop', 'pmlogmv', 'cut', 'nvidia-bug-report.sh', 'xzgrep', 'pinentry', 'lpstat.cups', 'eu-ar', 'dvired', 'nettle-lfib-stream', 'jinfo', 'c89', 'mono-service', 'runghc', 'hwloc-bind', 'gtf', 'journalctl', 'dbus-binding-tool', 'check-binary-files', 'hwloc-compress-dir', 'icewm-set-gnomewm', 'perf', 'lpoptions', 'msgconv', 'printafm', 'lpr', 'tput', 'keyctl', 'ex', 'bzless', 'sha512sum', 'withsctp', 'ssh-add', 'mesg', 'findmnt', 'gpgconf', 'host', 'agentxtrap', 'umask', 'raw_ethernet_fs_rate', 'fipshmac', 'gdbus', 'mono-sgen-gdb.py', 'gtester-report', 'ibv_dcini', 'lesspipe.sh', 'mysqlshow', 'piconv', 'xload', 'gtk-query-immodules-2.0-64', 'rmail.postfix', 'dshbak', 'localectl', 'ipcs', 'gex', 'locale', 'db_checkpoint', 'i2c', 'ldd', 'gs', 'arecordmidi', 'msql2mysql', 'autoupdate', 'find', 'chmod', 'amsstat', 'eu-addr2line', 'rpcgen', 'c++filt', 'sndfile-resample', 'hwloc-ps', 'look', 'ibdmtr', 'genpmda', 'pmprobe', 'rksh', 'pod2man', 'xzcmp', 'mlxfwreset', 'zipgrep', 'utmpdump', 'more', 'gdk-pixbuf-query-loaders-64', 'tc_wrap.py', 'rmiregistry', 'gpg-connect-agent', 'xfontsel', 'gsnd', 'xkbcomp', 'mprof-report', 'mktextfm', 'namei', 'gsettings', 'numademo', 'mpi-selector-menu', 'view', 'icewmbg', 'gcc-ranlib', 'hesinfo', 'cvs', 'pckt_drop', 'gnuplot-wx', 'objdump', 'mckey', 'chrt', 'unix-lpr.sh', 'nail', 'mlnx_qcn', 'sss_ssh_knownhostsproxy', 'ibv_uc_pingpong', 'envsubst', 'ghci-7.6.3', 'mkinitrd', 'autoconf', 'eu-unstrip', 'mysqlcheck', 'ipcrm', 'pango-list', 'lsns', 'loginctl', 'otfdump', 'hwloc-diff', 'mysql_waitpid', 'uniq', 'nvidia-xconfig', 'gvimtutor', 'setup-nsssysinit', 'dvipdf', 'wdctl', 'tee', 'killall', 'cabal', 'mcview', 'ldapsearch', 'sg', 'flex', 'runcon', 'xzegrep', 'gpg2', 'identify', 'tac', 'colcrt', 'pmgenmap', 'font2c', 'nvidia-cuda-mps-server', 'unpack200', 'readelf', 'mlxi2c', 'hexdump', 'ssltap', 'ibtopodiff', 'cxpm', 'msgcat', 'update-mime-database', 'singularity', 'pmloglabel', 'mono-sgen', 'xcutsel', 'irb', 'pmjson', 'login', 'factor', 'linux32', 'machinectl', 'lsb_release', 'vimx', 'gio', 'wget', 'troff', 'busctl', 'lastb', 'pmclient_fg', 'native2ascii', 'mono-service2', 'ibv_srq_pingpong', 'mknod', 'strace', 'sexp-conv', 'time', 'gio-querymodules-64', 'Mail', 'du', 'dconf', 'mlnx_get_vfs.pl', 'domainname', 'alsabat', 'systemd-tmpfiles', 'strace-log-merge', 'ibv_rc_pingpong', 'python2.7', 'sleep', 'cmtime', 'pwdx', 'lpunlock', 'eject', 'mdevices_info', 'ifnames', 'sha224sum', 'koi8rxterm', 'sed', 'getopts', 'xlogo', 'mlxuptime', 'newaliases.postfix', 'aseqnet', 'systemd-firstboot', 'xargs', 'nettle-hash', 'python2.7-config', 'ncursesw5-config', 'pcre-config', 'qperf', 'eu-make-debug-archive', 'newaliases', 'chage', 'build-classpath', 'mysqlaccess', 'bzdiff', 'isosize', 'mstmwrite', 'expr', 'pwmake', 'systemd-escape', 'ncurses5-config', 'xsetroot', 'ibnlparse', 'lstopo', 'lessecho', 'autoreconf', 'gslj', 'orbd', 'clear', 'gctags', 'vncpasswd', 'icewm-session', 'atq', 'mysqlimport', 'rpmkeys', 'xxd', 'xhost', 'ibv_asyncwatch', 'wsgen', 'sotruss', 'mstflint', 'run_perftest_loopback', 'watch', 'net-snmp-config', 'msgfilter', 'systemd-hwdb', 'lastlog', 'slogin', 'gconftool-2', 'ldapdelete', 'test', 'mst_ib_add', 'pkexec', 'zipcloak', 'rsyslog-recover-qi.pl', 'pkaction', 'unix2dos', 'groff', 'shred', 'itrace', 'xmlcatalog', 'texhash', 'systemd-machine-id-setup', 'flint', 'ibdiagnet_csv2xml.py', 'iecset', 'hwloc-annotate', 'eps2eps', 'autoscan', 'grotty', 'colrm', 'bash', 'glib-gettextize', 'yes', 'lz4', 'epstopdf', 'gpgparsemail', 'spax', 'pr', 'kill', 'bzcmp', 'mlxdump_ext', 'ypmatch', 'ibv_ud_pingpong', 'aria_ftdump', 'w', 'logname', 'ksh93', 'od', 'xmodmap', 'gpic', 'pmlogsize', 'p11-kit', 'systemd-nspawn', 'm17n-conv', 'bzip2', 'timedatectl', 'gresource', 'rping', 'infocmp', 'unmunge', 'nl', 'users', 'minit', 'idlj', 'xstdcmap', 'msgmerge', 'a2p', 'csharp', 'mft_uninstall.sh', 'testgdbm', 'gdk-pixbuf-thumbnailer', 'hsc2hs', 'lpq', 'glib-genmarshal', 'tailf', 'quota', 'hca_self_test.ofed', 'id', 'stty', 'update-ca-trust', 'mlxconfig', 'setreg', 'xzfgrep', 'mv', 'fipscheck', 'ftp-rfc', 'disco', 'sqlsharp', 'join', 'xsetpointer', 'ppc', 'rlogin-cwd', 'vimdiff', 'lchfn', 'tr', 'chacl', 'echo', 'netstat', 'texlinks', 'pkla-check-authorization', 'display', 'strip', 'xdg-settings', 'rpdcp', 'mstdump', 'mkpasswd', 'ping6', 'mlxphyburn', 'pydoc', 'ps2pdf12', 'jstat', 'gpgv', 'eu-strings', 'pphs', 'eu-elfcmp', 'jobs', 'zfgrep', 'systemd-delta', 'update-gtk-immodules', 'glib-compile-resources', 'gsettings-data-convert', 'pic', 'mlx_fpga', 'dotlockfile', 'gobject-query', 'redhat_lsb_init', 'Xorg', 'import', 'sftp', 'emacsclient', 'raw_ethernet_lat', 'zless', 'aria_pack', 'msgexec', 'false', 'crlutil', 'nvidia-cuda-mps-control', 'oclock', 'dnsdomainname', 'javac', 'pcp', 'mail', 'fwtrace', 'xdpr', 'awk', 'tclsh8.5', 'gprof', 'xkibitz', 'my_print_defaults', 'rcopy', 'passmass', 'pod2latex', 'freetype-config', 'bzip2recover', 'bdftruncate', 'x0vncserver', 'yum', 'abs2rel', 'geoiplookup', 'pcp2csv', 'build-classpath-directory', 'otfview', 'znew', 'mstmread', 'aplay', 'gvim', 'nvvs', 'ldapmodify', 'nv-hostengine', 'pl2pm', 'javap', 'pango-view', 'ibsim', 'sss_ssh_authorizedkeys', 'hostid', 'create-jar-links', 'mcra', 'zdiff', 'pathchk'] ['trqauthd', 'rhnsd', 'rhn_check', 'spacewalk-channel', 'rhnreg_ks', 'rhn_register', 'rhn-channel', 'rhn-profile-sync', 'subscription-manager', 'userhelper', 'pifconfig', 'pethtool', 'virt-what', 'atopacctd', 'abrt-install-ccpp-hook', 'abrt-dbus', 'abrt-configuration', 'abrtd', 'abrt-server', 'abrt-auto-reporting', 'vgcfgrestore', 'selabel_digest', 'resize2fs', 'luserdel', 'bootlist', 'fdisk', 'thin_trim', 'e4defrag', 'tracepath', 'pwhistory_helper', 'mkdumprd', 'mke2fs', 'mkfs.ext2', 'mkfs.ext3', 'mkfs.ext4', 'badblocks', 'mii-diag', 'lpc', 'lgroupmod', 'rpc.statd', 'lsdevinfo', 'ibfindnodesusing.pl', 'ifup', 'alsa-info', 'ibdiscover.pl', 'load_policy', 'rtcwake', 'thin_repair', 'usermod', 'xfs_freeze', 'lvs', 'xfs_mdrestore', 'plipconfig', 'groupmod', 'fsck.xfs', 'lsvpd', 'unix_update', 'readprofile', 'vgreduce', 'losetup', 'sshd-keygen', 'update-alternatives', 'rtas_event_decode', 'selabel_lookup_best_match', 'cracklib-check', 'ntptime', 'partx', 'agetty', 'pvdisplay', 'vmcore-dmesg', 'show_irq_affinity_hints.sh', 'mlnx_net_rules', 'kexec', 'cracklib-unpacker', 'lsprop', 'thin_dump', 'alternatives', 'vendor_pre_uninstall.sh', 'yppoll', 'swaplabel', 'lvchange', 'blockdev', 'ibdatacounts', 'dracut', 'useradd', 'zdump', 'alsa-info.sh', 'lparstat', 'ctrlaltdel', 'smpdump', 'ss', 'swapoff', 'swapon', 'zic', 'ipmaddr', 'sys-unconfig', 'sldd.sh', 'iconvconfig.ppc64le', 'iconvconfig', 'tcsd', 'ibhosts', 'dmsetup', 'lid', 'chcpu', 'cache_dump', 'ibchecknode', 'ibroute', 'depmod', 'vgremove', 'pseries_platform', 'nvme', 'getpcaps', 'ppp-watch', 'lscfg', 'cache_repair', 'xfs_logprint', 'postlock', 'serv_config', 'dumpe2fs', 'nvram', 'udevadm', 'parted', 'lsmod', 'tc', 'ntpdate', 'sestatus', 'fsck.minix', 'rpcinfo', 'pmc', 'groupmems', 'srp_daemon.sh', 'iptables-restore', 'pwunconv', 'routel', 'postqueue', 'ls-vdev', 'lpasswd', 'sysctl', 'e2freefrag', 'dmstats', 'capsh', 'sendmail', 'xfs_db', 'pam_timestamp_check', 'chpasswd', 'lvdisplay', 'hwstamp_ctl', 'lnewusers', 'zramctl', 'yptest', 'quotacheck', 'ibdatacounters', 'lvcreate', 'mkdict', 'vgmknodes', 'iptables-save', 'fixfiles', 'set_irq_affinity_cpulist.sh', 'lspci', 'xtables-multi', 'blkdeactivate', 'postlog', 'fsck', 'lsslot', 'xfs_quota', 'rdisc', 'update_flash_nv', 'srp_daemon', 'bridge', 'saquery', 'ibswitches', 'addpart', 'smpquery', 'sss_cache', 'clockdiff', 'ntpdc', 'ypset', 'runlevel', 'sssd', 'build-locale-archive', 'ntpd', 'nfsidmap', 'ipmievd', 'atrun', 'postcat', 'odp_stat.sh', 'lvconvert', 'e2fsck', 'fsck.ext2', 'fsck.ext3', 'fsck.ext4', 'rtstat', 'ibprintrt.pl', 'ifconfig', 'era_dump', 'xfs_growfs', 'sminfo', 'lvmsadc', 'ibclearcounters', 'dmfilemapd', 'restorecon', 'thin_ls', 'ldattach', 'grpconv', 'vendor_post_uninstall.sh', 'ntpq', 'nvsetenv', 'era_check', 'connectx_port_config', 'postconf', 'delpart', 'try-from', 'vpdupdate', 'era_restore', 'avcstat', 'munged', 'snmpd', 'mountstats', 'mklost+found', 'lvmsar', 'ls-veth', 'snmptrapd', 'route', 'ibsrpdm', 'ibstat', 'phc2sys', 'lvresize', 'cracklib-packer', 'new-kernel-pkg', 'fsck.nfs', 'irqbalance', 'logrotate', 'xfs_rtcp', 'rpc.rquotad', 'ibcacheedit', 'genhomedircon', 'genl', 'exportfs', 'xfs_bmap', 'grpck', 'alsactl', 'cache_writeback', 'newusers', 'selabel_partial_match', 'makedumpfile', 'show_gids', 'mlnx_affinity', 'ofed_uninstall.sh', 'vgexport', 'lvmdump', 'nslcd', 'pvresize', 'partprobe', 'set_irq_affinity_bynode.sh', 'show_irq_affinity.sh', 'dump_fts', 'errinjct', 'hardlink', 'matchpathcon', 'fdformat', 'vgextend', 'fsfreeze', 'ofpathname', 'pwck', 'dhclient', 'postdrop', 'sendmail.postfix', 'vgcfgbackup', 'sulogin', 'hack-coff', 'lpc.cups', 'xfs_info', 'ypbind', 'nameif', 'nstat', 'mkfs.cramfs', 'sim_server', 'activate_firmware', 'nfsstat', 'opensm', 'gssproxy', 'ibaddr', 'mkfs.xfs', 'groupadd', 'halt', 'osmtest', 'lvmpolld', 'lsmcode', 'pvs', 'lvremove', 'start-statd', 'debugfs', 'setpci', 'selinuxexeccon', 'ibportstate', 'rtmon', 'ibcheckerrors', 'vgimportclone', 'e2label', 'tune2fs', 'rtas_dump', 'postfix', 'lnstat', 'dump_mfts.sh', 'thin_restore', 'check_lft_balance.pl', 'ibidsverify.pl', 'cma_roce_tos', 'selabel_lookup', 'ip6tables-save', 'rmmod', 'cache_metadata_size', 'nsm', 'run_srp_daemon', 'runuser', 'xfs_metadump', 'getcap', 'sefcontext_compile', 'ip', 'iptables', 'glibc_post_upgrade.ppc64le', 'fsadm', 'iblinkinfo.pl', 'ibqueryerrors.pl', 'setfiles', 'sys_ident', 'dhclient-script', 'tracepath6', 'findfs', 'getsebool', 'cbq', 'e2image', 'blkdiscard', 'uuserver', 'ifcfg', 'shutdown', 'smtp-source', 'install-info', 'set_nodedesc.sh', 'xfs_repair', 'rsyslogd', 'rpcdebug', 'lvm', 'mkhomedir_helper', 'pvscan', 'logsave', 'pwconv', 'unsquashfs', 'ntp-keygen', 'e2undo', 'blkmapd', 'vgscan', 'osd_login', 'umount.nfs', 'ibcheckerrs', 'rpc.nfsd', 'iblinkinfo', 'ibtracert', 'cfdisk', 'common_irq_affinity.sh', 'modinfo', 'sasldblistusers2', 'rtpr', 'selinuxconlist', 'wrapper', 'blkid', 'ibclearerrors', 'lvmconf', 'xqmstats', 'vgsplit', 'postsuper', 'thin_check', 'filefrag', 'adduser', 'redhat_lsb_trigger.ppc64le', 'dump_lfts.sh', 'drmgr', 'cache_check', 'crond', 'pvchange', 'vendstat', 'setenforce', 'addgnupghome', 'tcpdmatch', 'reboot', 'vipw', 'rpc.gssd', 'cracklib-format', 'perfquery', 'sln', 'pivot_root', 'create-cracklib-dict', 'quotaon', 'groupdel', 'ptp4l', 'mkfs', 'xfs_estimate', 'dmeventd', 'gss-server', 'usernetctl', 'show_counters', 'xfs_ncheck', 'vgchange', 'grpunconv', 'quotastats', 'iptunnel', 'dkms', 'resizepart', 'sysctl_perf_tuning', 'xfs_mkfile', 'repquota', 'ip6tables-restore', 'lusermod', 'wipefs', 'sshd', 'ifdown', 'cache_restore', 'arp', 'pvremove', 'clock', 'tickadj', 'ldconfig', 'selinuxdefcon', 'lvreduce', 'vigr', 'quot', 'vgdisplay', 'lchage', 'arping', 'ibacm', 'ibcheckportstate', 'smparquery', 'insmod', 'addnote', 'lvmetad', 'ibprintca.pl', 'switch_root', 'hwclock', 'kpartx', 'ifstat', 'sysinfo-snapshot.py', 'setsebool', 'edquota', 'killall5', 'pidof', 'anacron', 'service', 'sfdisk', 'vgimport', 'vgrename', 'sm-notify', 'lvmdiskscan', 'lvscan', 'selinuxenabled', 'nologin', 'atd', 'accessdb', 'ibcheckstate', 'userdel', 'lsvio', 'ibnodes', 'weak-modules', 'quotaoff', 'setquota', 'era_invalidate', 'automount', 'xfs_copy', 'sosreport', 'consoletype', 'phc_ctl', 'safe_finger', 'ppc64_cpu', 'mlnx_eswitch_set', 'uesensor', 'rpc.mountd', 'ls-vscsi', 'ibsysstat', 'modprobe', 'ibstatus', 'lgroupadd', 'vgs', 'rtacct', 'pdata_tools', 'telinit', 'setup_mr_cache.sh', 'poweroff', 'lsof', 'slattach', 'visudo', 'ibcheckportwidth', 'update-pciids', 'nscd', 'update_flash', 'smtp-sink', 'mkswap', 'sushell', 'lvmconfig', 'mktree', 'xfs_admin', 'ctstat', 'lvrename', 'ibmirror', 'pam_tally2', 'chkconfig', 'pam_console_apply', 'xfs_io', 'ib2ib_setup', 'nfsdcltrack', 'mksquashfs', 'umount.nfs4', 'arpd', 'rtas_ibm_get_vpd', 'setcap', 'rtas_dbg', 'chroot', 'ibqueryerrors', 'grubby', 'timemaster', 'ibchecknet', 'installkernel', 'vgmerge', 'rpc.idmapd', 'create-munge-key', 'routef', 'mount.nfs', 'pvmove', 'ip6tables', 'postmulti', 'ibnetdiscover', 'key.dns_resolver', 'request-key', 'alsabat-test.sh', 'genhostid', 'ibswportwatch.pl', 'postmap', 'init', 'ibprintswitch.pl', 'ether-wake', 'ifenslave', 'selinux_restorecon', 'fstrim', 'xfs_fsr', 'packer', 'lgroupdel', 'vgcreate', 'mount.nfs4', 'ethtool', 'fsck.cramfs', 'postalias', 'lvextend', 'vgconvert', 'saslpasswd2', 'netreport', 'mkfs.minix', 'cma_roce_mode', 'ibcheckwidth', 'thin_metadata_size', 'faillock', 'thin_rmap', 'ibcheckport', 'pvck', 'postkick', 'ibrouters', 'pvcreate', 'tcpd', 'vgck', 'rpcbind', 'ping6', 'opal-prd', 'thin_delta', 'mii-tool', 'showmount', 'ibccquery', 'devlink', 'set_irq_affinity.sh', 'ibping', 'nfsiostat', 'mlnx_tune', 'hvcsadmin', 'unix_chkpwd', 'getenforce', 'luseradd', 'set_poweron_time', 'semodule', 'convertquota', 'applygnupgdefaults', 'fuser', 'ibccconfig', 'compat_gid_gen'] ['darshan-mk-log-dirs.pl', 'darshan-gen-cc.pl', 'darshan-gen-cxx.pl', 'darshan-gen-fortran.pl', 'darshan-config'] ['htar', '5.0.2.9', '6.0.0.11', '5.0.2.11', 'hsi', '6.2.0.1', 'TA_Status', 'test_TA'] ['esub', 'esub.poe', 'pim', 'lsf_daemons', 'rla', 'elim.jsdl', 'named', 'esub.tv', 'esub.openmp', 'esub.mvapich', 'esub.dprov', 'sbatchd', 'esub.bproc', 'esub.openmpi', 'esub.oldtvpoe', 'esub.mpichp4', 'elim.frequency', 'esub.tvlammpi', 'esub.oldpoe', 'lim', 'esub.ls_dyna', 'esub.tvmpich_gm', 'esub.fluent', 'nios', 'esub.gold', 'esub.mpich_gm', 'esub.pvm', 'esub.intelmpi', 'esub.mpich_mx', 'eauth.krb5', 'res', 'tmp.elim.sa', 'eauth', 'esub.tvpoe', 'mesub', 'esub.mpich2', 'melim', 'esub.lammpi'] ['csm_bb_vg_create', 'csm_node_find_job', 'csm_cluster_query_state', 'csm_allocation_create', 'csm_ib_cable_update', 'csm_allocation_query_active_all', 'csm_bb_lv_delete', 'csm_allocation_update_state', 'csm_switch_attributes_update', 'csm_soft_failure_recovery', 'csm_diag_run_query', 'csm_allocation_step_begin', 'csm_bb_vg_delete', 'csm_node_attributes_query_history', 'csm_allocation_query_details', 'csm_node_attributes_query_details', 'csm_diag_run_query_details', 'csm_ras_event_create', 'csm_diag_run_begin', 'csm_node_resources_query_all', 'csm_allocation_query', 'csm_ras_event_query_allocation', 'csm_switch_attributes_query', 'csm_node_attributes_query', 'csm_switch_attributes_query_details', 'csm_infrastructure_health_check', 'csm_node_attributes_update', 'csm_ras_msg_type_create', 'csm_ras_msg_type_delete', 'csm_ras_msg_type_query', 'csm_node_query_state_history', 'csm_switch_attributes_query_history', 'csm_allocation_step_query_active_all', 'csm_bb_lv_create', 'csm_node_resources_query', 'csm_allocation_delete', 'csm_ras_event_query', 'csm_allocation_resources_query', 'csm_diag_result_create', 'csm_node_delete', 'csm_ras_msg_type_update', 'csm_bb_vg_query', 'csm_ib_cable_query_history', 'csm_diag_run_end', 'csm_allocation_step_query', 'csm_allocation_step_query_details', 'csm_allocation_update_history', 'csm_allocation_step_end', 'csm_ib_cable_query', 'csm_jsrun_cmd', 'csm_bb_lv_query'] [] [] ['decoder'] ['ibmsquit', 'ibis', 'dump2slvl.pl', 'ibdiagpath', 'IBMgtSim', 'dump2psl.pl', 'ibdmchk', 'mkSimNodeDir', 'ibdiagui', 'ibdiagnet', 'RunSimTest', 'ibdmtr', 'ibtopodiff', 'ibdmsh', 'ibnlparse', 'ibmssh'] ['jsrun', 'jswait', 'jskill', 'query_env', 'export_slurm_env', 'jsm_simulator', 'js_task_info', 'admin', 'jsproxy', 'jslist', 'export_smpi_env', 'jsm', 'stock'] ['hiera', 'facter', 'puppet', 'facter-ng.bat'] ['mmtrace', 'mmsysmon.py', 'mmnfsfuncs', 'mmcesnfsmonitor', 'mmjob', 'mmdelcallback', 'tsdf', 'tschfileset', 'tslsdisk', 'tslspolicy', 'tslsfs', 'tsdelsnapshot', 'tslsfileset', 'tsnsdaccess', 'tscrsnapshot', 'tslspool', 'tssnapdir', 'tsedquota', 'tsusercmd', 'tslssnapshot', 'tsstatus', 'mmcrnsd', 'tsgetscsiinfo', 'mmqosnice', 'mmsetquota', 'mmdelfileset', 'tsprpreemptabort', 'cleanupkeystonedb', 'mmsdrfsdef.Linux', 'mmcesuserauthcrservice', 'mmdumpfilocks', 'tschdisk', 'tsaddpdisk', 'tsctl', 'tskafkaauth', 'tsdbfs', 'tscheckquota', 'tsfsctl', 'tsrpldisk', 'tschpdisk', 'tsrecgroupserver', 'tscmd', 'tsreclaimspace', 'tscrrecgroup', 'tschstoragepool', 'tsrestripefs', 'tsdefragfs', 'tsfileid', 'tsdsh', 'tsdeldisk', 'tsquotaon', 'tschfs', 'tsdefedquota', 'tsunmount', 'tsdelpdisk', 'tsressnapshot', 'tscrvdisk', 'tsquotaoff', 'tsexpelnode', 'tslsvdisk', 'tscrfs', 'tschmgr', 'tslsrecgroup', 'tslsrecoverygroupevents', 'tsdelvdisk', 'tsnsddiscover', 'tsdefquotaoff', 'tscrfileset', 'tsdelfs', 'tsdbvdisk', 'tsdelfileset', 'tsadddisk', 'tscachectl', 'tsdefquotaon', 'tschcarrier', 'tsauth', 'tslsqos', 'tslspdisk', 'tsnsdrediscover', 'tsremount', 'tsdelrecgroup', 'tschpool', 'tsrepquota', 'tschqos', 'tschrecgroup', 'tsfsck', 'tsdiag', 'tssbrff', 'mmlsfileset', 'mmexectsmcmd', 'mmgetkafkaspecinfo', 'mmfs', 'mmchconfig', 'ces.snap.py', 'mmperfmon', 'tsgetacl', 'clstrwatchcallbacks', 'mmcessmblsconfig', 'tslsattr', 'mmcesmonitord', '.links', 'mmnfsgrace', 'mmhelp-apolicy', 'mmpmon', 'mmcesnfsdelexport', 'mmchpolicy', 'gui.snap.py', 'tspcache', 'perfmon.snap.py', 'mmsdrquerydef', 'mmlsqos', 'mmxargs', 'tschattr', 'mmclidecode', 'clstrwatchconsumermanager', 'mmfsctl', 'mmpsnap', 'mmccrnv', 'perf.snap.py', 'mmcespnfsip', 'mmnfsnodeback', 'tsimgrestore', 'mmcesuserauthckservice', 'mmchnodeclass', 'pymmcesnfslsexport.py', 'mmdelacl', 'mmumount', 'mmcrnodeclass', 'mmsysmonc', 'tspcacheevict', 'mmexecvfile', 'sshwrap', 'mmgetifconf', 'mmfs-ppc64-rh4', 'sysmon.snap.py', 'mmimgrestore', 'mmcesobjaccesslinkfset', 'mmchecksubsys', 'mmcesop', 'tspmon', 'mmdefedquota', 'mmdelsnapshot', 'mmreclaimspace', 'mmsysmoncontrol', 'tsspectrumdiscover', 'mmyfields', 'mmchnode', 'mmrestorefs', 'mmcallhome', 'mmexportfs', 'mmcesnfsloadexport', 'tslspool34', 'mmnfsmonitor', 'mmsnmpagentd30', 'tsfindinode', 'mmfsfuncs.Linux', 'mmdumpperfdata', 'mmcesobjcrbase', 'mmdsh', 'objmetric_count.py', 'mmauditmount', 'mmcessmblsexport', 'mmdevdiscover', 'mmlsnode', 'mmautoload', 'mmcesnfscrexport', 'mmchnsd', 'mmfileid', 'mmcesnfsfuncs', 'mmcesrecovernode', 'mmlsfs', 'mmcollectdebugdata', 'tseditacl', 'tsbuhelper', 'tslinkfileset', 'tspreparedisk', 'mmrpldisk', 'mmdelnode', 'mmceslog', 'mmcrfsc', 'mmcesblockfuncs', 'mmgensymtable', 'mmfsd', 'mmnfsinstall', 'mmdspmsg', 'mmclone', 'mmchfs', 'mmlsdisk', 'mmnfstakeover', 'tsyselect', 'mmnfsup', 'mmcessmbcrexport', 'tsaddrmap', 'mmnetverify', 'mmchpool', 'msgqueue.snap.py', 'mmcesobjlscfg', 'tsrestorefileset', 'mmbuildgpl', 'mmsmbman', 'tsfindname', 'mmcesloadmonitor', 'mmcesobjaccess', 'mmaddcallback', 'mmcesobjpolicyfuncs', 'mmcessmbdelexport', 'msgqueueDaemonManager', 'core.snap.py', 'tsgskkm', 'mmauth', 'mmedquota', 'mmshutdown', 'tsdbmemleakparse', 'mmadquery', 'mmsdrcli', 'mmccr', 'mmcesobjchstoragepolicy', 'mmcesnfschcfg', 'tswatchmonitor', 'mmmigratefs', 'mmputacl', 'mmlscluster', 'commonsnap.py', 'mmcesservice', 'mmadddisk', 'tslsmgr', 'tssbrindex', 'mmafmlocal', 'mmlsperfdata', 'mmnfsuninstall', 'mmcmi', 'mmcesobjs3', 'tspcachescan', 'kdump-4.14.0-115.14.1.el7a.ppc64le', 'mmlsnsd', 'mmchcluster', 'mmunmount', 'mmnfsquorumloss', 'mmcesnetdeladdress', 'mmlsquota', 'mmces', 'pymmcesnfsfuncs.py', 'tsputacl', 'mmchqos', 'tsprshowfence', 'gpfsrunlevel', 'mmimgbackup', 'mmsdrrestore', 'tsqosnice', 'mmsdrserv', 'mmmsgqueue', 'mmcesmmcdelexport', 'mmlinkfileset', 'mmrestoreconfig', 'mmdelnodeclass', 'mmsmbfuncs', 'mmcesobjcfgman', 'mmfixcfg', 'mmcesnfslsexport', 'tsdbmemleak', 'mmaudit', 'mmcesnfslscfg', 'mmsmbsupportedoptions', 'mmafmconfig', 'mmlscallback', 'mmlsmgr', 'tsbackup', 'mmcesminfuncs', 'mmfsmount', 'mmcesmmcchexport', 'tsrestripefile', 'kdump', 'mmimportfs', 'mmcesobjcrring', 'mmnfs', 'mmcommon', 'mmcesnetmvaddress', 'mmsnmpagentd', 'mmcesobjfuncs', 'gui.callhome.py', 'tsbackup33', 'lxtrace', 'mmsdrfsdef', 'mmsmb', 'mmobj', 'tsprclear', 'mmceshdfsfuncs', 'mmcesnetworkmonitor', 'tspcacheutil', 'mmqos', 'mmlspolicy', 'mmrestripefs', 'mmcessmbfuncs', 'mmaddnode', 'mmblock', 'mmcrfs', 'mmmount', 'tsprreadres', 'mmnsddiscover', 'mmprotocoltrace', 'mmglobfuncs', 'tsprreadkeys', 'mmnfsdown', 'gpfs.snap', 'object.snap.py', 'mmcesnetaddaddress', 'mmcesobjchcfg', 'mmrsh', 'mmcesobjmr', 'mmeditacl', 'auditConsumerManager', 'mmlsconfig', 'mmsync', 'mmgetacl', 'mmcesuserauthrmservice', 'mmhealth', 'tsdelacl', 'mmremote', 'mmpercentencode', 'mmcloudfuncs', 'daemonize', 'mmcesnfschexport', 'tsclone', 'callhome.snap.py', 'clstrwatchreplaymanager', 'tsnetverify', 'mmstartup', 'mmcachectl', 'mmgskkm', 'mmdefragfs', 'mmsnapdir', 'tsapolicy', 'mmrcmd', 'mmexpelnode', 'mmsdrquery', 'ece.callhome.py', 'mmchdisk', 'mmcesnetdown', 'mmlslicense', 'mmrestripefile', 'mmcrfileset', 'mmnfscleanup', 'mmlogmsg', 'mmcessmbexportacl', 'mmchlicense', 'mmsetrcmd', 'tsclwatchrules', 'mmdynamicmap', 'tssetquota', 'tsprreserve', 'wftopics', 'mmvaryonvg', 'mmsnmpagentd10', 'mmbackupconfig', 'mmdefquotaon', 'mmlsattr', 'mmcesfuncs', 'mmfsadm', 'mmcesmmccrexport', 'runmmfs', 'mmafmcmd', 'ccrrestore', 'mmunlinkfileset', 'basicsnap.py', 'mmafmhomeconfig', 'auth.snap.py', 'fab3.snap.py', 'mmuserauth', 'object.callhome.py', 'mmlogsort', 'mmdf', 'mmcesobjcrstoragepolicy', 'mmdefquotaoff', 'mmtracectl', 'mmdump', 'tsprquery', 'mmfsenv', 'mmfsfuncs', 'mmrepquota', 'mmcesdr', 'mmcesnode', 'tslsquota', 'mmdsm', 'mmdelnsd', 'mmnfsinit', 'mmcrsnapshot', 'mmlockf', 'mmcesauthfuncs', 'network.callhome.py', 'mmglobfuncs.Linux', 'tsprinquiry', 'nfs.snap.py', 'mmcesnetlsaddress', 'mmapplypolicy', 'mmdumpkthreads', 'tswatchgpfsconduit', 'mmcessmbchconfig', 'perfmon.callhome.py', 'mmauditpreunmount', 'mmrcp', 'scpwrap', 'mmremotefs', 'tsunlinkfileset', 'mmcrcluster', 'mmnfspreunmount', 'mmcessmbchexport', 'tsauditconsumer', 'mmchattr', 'mmdeldisk', 'mmfsck', 'smb.snap.py', 'mmcesobjdepstoragepolicy', 'mmcheckquota', 'mmprodname', 'mmdelfs', 'mmcallhremote', 'mmgetstate', 'mmcesuserauthlsservice', 'mmcesnetup', 'mmremotecluster', 'tsstarthelper', 'mmcloudgateway', 'mmgetconfdata', 'tschpolicy', 'mmchmgr', 'mmcesnetchaddress', 'mmsmbvalidoptions', 'mmchfileset', 'mmwatch', 'tsprregister', 'mmstartpolicy', 'hadoop.snap.py', 'mmquotaoff', 'mmcesmonitor', 'mmquotaon', 'msgqueueservicesmonitormanager', 'mmlspool', 'mmlsmount', 'mmccrmonitor', 'mmbackup', 'mmlsnodeclass', 'lxtrace-4.14.0-115.14.1.el7a.ppc64le', 'mmrefresh', 'mmnfsrecovernode', 'mmpercentdecode', 'wftopichk', 'tspcachesnapdiff', 'mmdiag', 'mmlssnapshot', 'mmcesobjlsstoragepolicy', 'mmafmctl', 'mmstatdcallout', 'mmksh', 'sshscpwrap'] Path provided by --with-executables-search-path ['win32fe.exe', 'win32feutils.dll'] child config.packages.lgrind 0.010354 ================================================================================ TEST alternateConfigureLibrary from config.packages.slepc(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/packages/slepc.py:88) TESTING: alternateConfigureLibrary from config.packages.slepc(config/BuildSystem/config/packages/slepc.py:88) Defined make rule "slepc-build" with dependencies "" and code [] Defined make rule "slepc-install" with dependencies "" and code [] child config.packages.slepc 0.001586 ================================================================================ TEST alternateConfigureLibrary from config.packages.gmp(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.gmp(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.gmp 0.000753 ================================================================================ TEST alternateConfigureLibrary from config.packages.mpfr(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.mpfr(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.mpfr 0.000745 ================================================================================ TEST alternateConfigureLibrary from config.packages.giflib(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.giflib(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.giflib 0.000742 ================================================================================ TEST alternateConfigureLibrary from config.packages.egads(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.egads(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.egads 0.000737 ================================================================================ TEST alternateConfigureLibrary from config.packages.ctetgen(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.ctetgen(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.ctetgen 0.000747 ================================================================================ TEST alternateConfigureLibrary from config.packages.concurrencykit(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.concurrencykit(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.concurrencykit 0.000737 ================================================================================ TEST locateC2html from config.packages.c2html(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/packages/c2html.py:33) TESTING: locateC2html from config.packages.c2html(config/BuildSystem/config/packages/c2html.py:33) Looking for default C2html executable Checking for program /sw/sources/lsf-tools/2.0/summit/bin/c2html...not found Checking for program /sw/summit/xalt/1.2.0/bin/c2html...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/bin/c2html...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/cmake-3.15.2-xit2o3iepxvqbyku77lwcugufilztu7t/bin/c2html...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/bin/c2html...not found Checking for program /sw/summit/forge/20.0.1/bin/c2html...not found Checking for program /sw/summit/cuda/10.1.243/bin/c2html...not found Checking for program /opt/ibm/spectrumcomputing/lsf/10.1.0.9/linux3.10-glibc2.17-ppc64le-csm/bin/c2html...not found Checking for program /usr/bin/c2html...not found Checking for program /usr/sbin/c2html...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/darshan-runtime-3.1.7-cnvxicgf5j4ap64qi6v5gxp67hmrjz43/bin/c2html...not found Checking for program /sw/sources/hpss/bin/c2html...not found Checking for program /opt/ibm/spectrumcomputing/lsf/10.1.0.9/linux3.10-glibc2.17-ppc64le-csm/etc/c2html...not found Checking for program /opt/ibm/csm/bin/c2html...not found Checking for program /usr/local/bin/c2html...not found Checking for program /usr/local/sbin/c2html...not found Checking for program /opt/ibm/flightlog/bin/c2html...not found Checking for program /opt/ibutils/bin/c2html...not found Checking for program /opt/ibm/spectrum_mpi/jsm_pmix/bin/c2html...not found Checking for program /opt/puppetlabs/bin/c2html...not found Checking for program /usr/lpp/mmfs/bin/c2html...not found Checking for program /ccs/home/adams/petsc_install/lib/petsc/bin/win32fe/c2html...not found Unable to find programs ['c2html'] providing listing of each search directory to help debug Path provided in Python program Path provided by default path ['bsub', 'bjob', 'showusage'] ['mpirun', 'ibrun', 'ibrun.symm', 'aprun', 'jsrun', 'ld', 'xalt_helper_functions.sh'] ['shmemrun', 'profile2mat.pl', 'oshrun', 'oshmem_info', 'orterun', 'orted', 'orte-server', 'orte-info', 'orte-clean', 'ompi_info', 'ompi-server', 'ompi-clean', 'mpitool', 'mpirun', 'mpijob', 'mpiexec', 'jumpshot', 'get_nl_setting', 'efix', 'alias.pl', 'aggregate_profile.pl', 'stock', 'shmemfort', 'shmemcxx', 'shmemcc', 'shmemc++', 'shmemCC', 'oshfort', 'oshcxx', 'oshcc', 'oshc++', 'oshCC', 'ortecc', 'opal_wrapper', 'mpixlf', 'mpixlc', 'mpixlC', 'mpipgifort', 'mpipgicc', 'mpipgic++', 'mpifort', 'mpif90', 'mpif77', 'mpicxx', 'mpicc', 'mpic++', 'mpiCC', 'mpip-jsrun'] ['ccmake', 'cmake', 'ctest', 'cpack'] ['localrc', 'pgaccelerror', 'pgimport', 'pgacclnk', 'pgaccelinfo', 'pgnvd', 'pgexplain.xml', 'pgunzip', 'pgzip', 'pgsize', 'pgipa', 'pgicg', 'pgextract', 'pgappend', 'pgprepro', 'pgcpuid', 'pgprofrc', 'pgprof', 'pgf901-llvm_ex', 'pgf901-llvm', 'pgf90-llvm_ex', 'pgf902-llvm', 'pggpp2ex-llvm', 'pggpp2-llvm', 'pggpp1-llvm', 'pggdecode', 'pgc-llvm_ex', 'pgc-llvm', 'pgfortran', 'pgf90', 'pgc++', 'pgcc18', 'pgcc11', 'pgcc', 'pgnvvm', 'makelocalrc', 'pgnvdlinpowerrc', 'pgnvd64rc', 'pgnvdrc', '.pgnvdrc', 'acclinuxpower64rc', 'acc1rc', 'versionrc', 'powerversionrc', 'c++llvmrc', 'pgllvmrc', 'llvmrc', 'linpoweriparc', 'noiparc', 'iparc', 'pgftnrc', 'pgf90linpowerrc', 'pgc++linpowerrc', 'pgcclinpowerrc', 'linpowerrc', 'powerrc', 'cpprc', 'ccrc', 'fnativerc', 'nativerc', '.pgfortranrc', '.pgf90rc', '.pgc++rc', '.pgcc18rc', '.pgcc11rc', '.pgccrc', 'siterc'] ['ddt-debugger-mps', 'ddt', 'ddt-debugger', 'allinea-client', 'ddt-mpirun', 'forge-probe', 'forge', 'make-profiler-libraries', 'ddt-debugger-ll', 'map', 'ddt-client'] ['cuobjdump', 'cuda-gdb', 'cuda-gdbserver', 'gpu-library-advisor', 'cuda-memcheck', 'nsight', 'nsight_ee_plugins_manage.sh', 'nv-nsight-cu-cli', 'bin2c', 'crt', 'cudafe++', 'fatbinary', 'nvcc', 'nvcc.profile', 'nvlink', 'ptxas', 'nvdisasm', 'nvprof', 'nvprune', 'computeprof', 'nvvp', 'cuda-install-samples-10.1.sh'] ['brsvjob', 'lspasswd', 'bmgroup', 'bpost', 'btop', 'bclusters', 'lsplace', 'bjdepinfo', 'lsreghost', 'brsvs', 'bparams', 'bgadd', 'lsrun', 'lsload', 'breconfig', 'lsfrestart', 'bconf', 'bmod', 'bsub', 'lsunlockhost', 'bmodify', 'bread', 'bacct', 'lsfrsv', 'lsgrun', 'bslots', 'bapp', 'bjobs', 'lsmail', 'lsfstartup', 'lsmake4', 'lslockhost', 'lsfshutdown', 'bpeek', 'lsrun.sh', 'lslogin', 'bimages', 'bchkpnt', 'bwait', 'lsfhadoop.sh', 'bsla', 'brsvmod', 'lsrtasks', 'blimits', 'busers', 'bresources', 'bqueues', 'brequeue', 'bmg', 'lsrcp', 'lseligible', 'lshosts', 'lsloadadj', 'breboot', 'lsacct', 'lsclusters', 'bugroup', 'lsltasks', 'lsadmin', 'bstatus', 'bgbroker', 'bgdel', 'bentags', 'lsportcheck', 'brsvsub', 'lsf-start-spark.sh', 'bqc', 'bhpart', 'lsf-spark-shell.sh', 'lsmakerm', 'lsf-spark-submit.sh', 'brestart', 'bswitch', 'bjgroup', 'lsreconfig', 'lammpirun_wrapper', 'lsf-stop-spark.sh', 'badmin', 'bbot', 'bstop', 'lsinfo', 'brun', 'bhist', 'bhosts', 'bgmod', 'brsvadd', 'bkill', 'brlainfo', 'brsvdel', 'xagent', 'bresize', 'bmig', 'lsmon', 'lsid', 'bgpinfo', 'lsmake', 'bresume', 'blaunch', 'lsacctmrg'] ['sview', 'strigger', 'sstat', 'sshare', 'srun', 'sreport', 'squeue', 'sprio', 'smap', 'sinfo', 'sgather', 'sdiag', 'scontrol', 'scancel', 'sbcast', 'sbatch', 'sattach', 'salloc', 'sacctmgr', 'sacct', 'qsub', 'tracejob', 'qterm', 'qstop', 'qstat', 'qstart', 'qsig', 'qselect', 'qrun', 'qrls', 'qrerun', 'qorder', 'qnodes', 'qmsg', 'qmove', 'qmgr', 'qhold', 'qgpureset', 'qgpumode', 'qenable', 'qdisable', 'qdel', 'qchkpt', 'qalter', 'printtracking', 'printserverdb', 'printjob', 'pbsnodes', 'pbsdsh', 'pbs_track', 'nqs2pbs', 'hostn', 'chk_tree', 'jobsub', 'jobstat', 'ctags', 'diffstat', 'rpmsign', 'swig', 'ccache-swig', 'ocs', 'cscope-indexer', 'cscope', 'doxygen', 'unwrapdiff', 'splitdiff', 'rediff', 'recountdiff', 'lsdiff', 'interdiff', 'grepdiff', 'flipdiff', 'fixcvsdiff', 'filterdiff', 'espdiff', 'editdiff', 'dehtmldiff', 'combinediff', 'yacc', 'byacc', 'indent', 'rlog', 'rcsmerge', 'rcsfreeze', 'rcsdiff', 'rcsclean', 'rcs', 'merge', 'ident', 'co', 'ci', 'svnversion', 'svnsync', 'svnserve', 'svnrdump', 'svnlook', 'svndumpfilter', 'svnadmin', 'svn', 'intltoolize', 'intltool-update', 'intltool-prepare', 'intltool-merge', 'intltool-extract', 'gettextize', 'autopoint', 'stap-report', 'stapsh', 'staprun', 'stap-merge', 'stap-prep', 'stap', 'screen', 'rhn_register', 'whiptail', 'subscription-manager', 'rhsmcertd', 'rhsm-debug', 'rct', 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'ps2pdf12', 'jstat', 'gpgv', 'eu-strings', 'pphs', 'eu-elfcmp', 'jobs', 'zfgrep', 'systemd-delta', 'update-gtk-immodules', 'glib-compile-resources', 'gsettings-data-convert', 'pic', 'mlx_fpga', 'dotlockfile', 'gobject-query', 'redhat_lsb_init', 'Xorg', 'import', 'sftp', 'emacsclient', 'raw_ethernet_lat', 'zless', 'aria_pack', 'msgexec', 'false', 'crlutil', 'nvidia-cuda-mps-control', 'oclock', 'dnsdomainname', 'javac', 'pcp', 'mail', 'fwtrace', 'xdpr', 'awk', 'tclsh8.5', 'gprof', 'xkibitz', 'my_print_defaults', 'rcopy', 'passmass', 'pod2latex', 'freetype-config', 'bzip2recover', 'bdftruncate', 'x0vncserver', 'yum', 'abs2rel', 'geoiplookup', 'pcp2csv', 'build-classpath-directory', 'otfview', 'znew', 'mstmread', 'aplay', 'gvim', 'nvvs', 'ldapmodify', 'nv-hostengine', 'pl2pm', 'javap', 'pango-view', 'ibsim', 'sss_ssh_authorizedkeys', 'hostid', 'create-jar-links', 'mcra', 'zdiff', 'pathchk'] ['trqauthd', 'rhnsd', 'rhn_check', 'spacewalk-channel', 'rhnreg_ks', 'rhn_register', 'rhn-channel', 'rhn-profile-sync', 'subscription-manager', 'userhelper', 'pifconfig', 'pethtool', 'virt-what', 'atopacctd', 'abrt-install-ccpp-hook', 'abrt-dbus', 'abrt-configuration', 'abrtd', 'abrt-server', 'abrt-auto-reporting', 'vgcfgrestore', 'selabel_digest', 'resize2fs', 'luserdel', 'bootlist', 'fdisk', 'thin_trim', 'e4defrag', 'tracepath', 'pwhistory_helper', 'mkdumprd', 'mke2fs', 'mkfs.ext2', 'mkfs.ext3', 'mkfs.ext4', 'badblocks', 'mii-diag', 'lpc', 'lgroupmod', 'rpc.statd', 'lsdevinfo', 'ibfindnodesusing.pl', 'ifup', 'alsa-info', 'ibdiscover.pl', 'load_policy', 'rtcwake', 'thin_repair', 'usermod', 'xfs_freeze', 'lvs', 'xfs_mdrestore', 'plipconfig', 'groupmod', 'fsck.xfs', 'lsvpd', 'unix_update', 'readprofile', 'vgreduce', 'losetup', 'sshd-keygen', 'update-alternatives', 'rtas_event_decode', 'selabel_lookup_best_match', 'cracklib-check', 'ntptime', 'partx', 'agetty', 'pvdisplay', 'vmcore-dmesg', 'show_irq_affinity_hints.sh', 'mlnx_net_rules', 'kexec', 'cracklib-unpacker', 'lsprop', 'thin_dump', 'alternatives', 'vendor_pre_uninstall.sh', 'yppoll', 'swaplabel', 'lvchange', 'blockdev', 'ibdatacounts', 'dracut', 'useradd', 'zdump', 'alsa-info.sh', 'lparstat', 'ctrlaltdel', 'smpdump', 'ss', 'swapoff', 'swapon', 'zic', 'ipmaddr', 'sys-unconfig', 'sldd.sh', 'iconvconfig.ppc64le', 'iconvconfig', 'tcsd', 'ibhosts', 'dmsetup', 'lid', 'chcpu', 'cache_dump', 'ibchecknode', 'ibroute', 'depmod', 'vgremove', 'pseries_platform', 'nvme', 'getpcaps', 'ppp-watch', 'lscfg', 'cache_repair', 'xfs_logprint', 'postlock', 'serv_config', 'dumpe2fs', 'nvram', 'udevadm', 'parted', 'lsmod', 'tc', 'ntpdate', 'sestatus', 'fsck.minix', 'rpcinfo', 'pmc', 'groupmems', 'srp_daemon.sh', 'iptables-restore', 'pwunconv', 'routel', 'postqueue', 'ls-vdev', 'lpasswd', 'sysctl', 'e2freefrag', 'dmstats', 'capsh', 'sendmail', 'xfs_db', 'pam_timestamp_check', 'chpasswd', 'lvdisplay', 'hwstamp_ctl', 'lnewusers', 'zramctl', 'yptest', 'quotacheck', 'ibdatacounters', 'lvcreate', 'mkdict', 'vgmknodes', 'iptables-save', 'fixfiles', 'set_irq_affinity_cpulist.sh', 'lspci', 'xtables-multi', 'blkdeactivate', 'postlog', 'fsck', 'lsslot', 'xfs_quota', 'rdisc', 'update_flash_nv', 'srp_daemon', 'bridge', 'saquery', 'ibswitches', 'addpart', 'smpquery', 'sss_cache', 'clockdiff', 'ntpdc', 'ypset', 'runlevel', 'sssd', 'build-locale-archive', 'ntpd', 'nfsidmap', 'ipmievd', 'atrun', 'postcat', 'odp_stat.sh', 'lvconvert', 'e2fsck', 'fsck.ext2', 'fsck.ext3', 'fsck.ext4', 'rtstat', 'ibprintrt.pl', 'ifconfig', 'era_dump', 'xfs_growfs', 'sminfo', 'lvmsadc', 'ibclearcounters', 'dmfilemapd', 'restorecon', 'thin_ls', 'ldattach', 'grpconv', 'vendor_post_uninstall.sh', 'ntpq', 'nvsetenv', 'era_check', 'connectx_port_config', 'postconf', 'delpart', 'try-from', 'vpdupdate', 'era_restore', 'avcstat', 'munged', 'snmpd', 'mountstats', 'mklost+found', 'lvmsar', 'ls-veth', 'snmptrapd', 'route', 'ibsrpdm', 'ibstat', 'phc2sys', 'lvresize', 'cracklib-packer', 'new-kernel-pkg', 'fsck.nfs', 'irqbalance', 'logrotate', 'xfs_rtcp', 'rpc.rquotad', 'ibcacheedit', 'genhomedircon', 'genl', 'exportfs', 'xfs_bmap', 'grpck', 'alsactl', 'cache_writeback', 'newusers', 'selabel_partial_match', 'makedumpfile', 'show_gids', 'mlnx_affinity', 'ofed_uninstall.sh', 'vgexport', 'lvmdump', 'nslcd', 'pvresize', 'partprobe', 'set_irq_affinity_bynode.sh', 'show_irq_affinity.sh', 'dump_fts', 'errinjct', 'hardlink', 'matchpathcon', 'fdformat', 'vgextend', 'fsfreeze', 'ofpathname', 'pwck', 'dhclient', 'postdrop', 'sendmail.postfix', 'vgcfgbackup', 'sulogin', 'hack-coff', 'lpc.cups', 'xfs_info', 'ypbind', 'nameif', 'nstat', 'mkfs.cramfs', 'sim_server', 'activate_firmware', 'nfsstat', 'opensm', 'gssproxy', 'ibaddr', 'mkfs.xfs', 'groupadd', 'halt', 'osmtest', 'lvmpolld', 'lsmcode', 'pvs', 'lvremove', 'start-statd', 'debugfs', 'setpci', 'selinuxexeccon', 'ibportstate', 'rtmon', 'ibcheckerrors', 'vgimportclone', 'e2label', 'tune2fs', 'rtas_dump', 'postfix', 'lnstat', 'dump_mfts.sh', 'thin_restore', 'check_lft_balance.pl', 'ibidsverify.pl', 'cma_roce_tos', 'selabel_lookup', 'ip6tables-save', 'rmmod', 'cache_metadata_size', 'nsm', 'run_srp_daemon', 'runuser', 'xfs_metadump', 'getcap', 'sefcontext_compile', 'ip', 'iptables', 'glibc_post_upgrade.ppc64le', 'fsadm', 'iblinkinfo.pl', 'ibqueryerrors.pl', 'setfiles', 'sys_ident', 'dhclient-script', 'tracepath6', 'findfs', 'getsebool', 'cbq', 'e2image', 'blkdiscard', 'uuserver', 'ifcfg', 'shutdown', 'smtp-source', 'install-info', 'set_nodedesc.sh', 'xfs_repair', 'rsyslogd', 'rpcdebug', 'lvm', 'mkhomedir_helper', 'pvscan', 'logsave', 'pwconv', 'unsquashfs', 'ntp-keygen', 'e2undo', 'blkmapd', 'vgscan', 'osd_login', 'umount.nfs', 'ibcheckerrs', 'rpc.nfsd', 'iblinkinfo', 'ibtracert', 'cfdisk', 'common_irq_affinity.sh', 'modinfo', 'sasldblistusers2', 'rtpr', 'selinuxconlist', 'wrapper', 'blkid', 'ibclearerrors', 'lvmconf', 'xqmstats', 'vgsplit', 'postsuper', 'thin_check', 'filefrag', 'adduser', 'redhat_lsb_trigger.ppc64le', 'dump_lfts.sh', 'drmgr', 'cache_check', 'crond', 'pvchange', 'vendstat', 'setenforce', 'addgnupghome', 'tcpdmatch', 'reboot', 'vipw', 'rpc.gssd', 'cracklib-format', 'perfquery', 'sln', 'pivot_root', 'create-cracklib-dict', 'quotaon', 'groupdel', 'ptp4l', 'mkfs', 'xfs_estimate', 'dmeventd', 'gss-server', 'usernetctl', 'show_counters', 'xfs_ncheck', 'vgchange', 'grpunconv', 'quotastats', 'iptunnel', 'dkms', 'resizepart', 'sysctl_perf_tuning', 'xfs_mkfile', 'repquota', 'ip6tables-restore', 'lusermod', 'wipefs', 'sshd', 'ifdown', 'cache_restore', 'arp', 'pvremove', 'clock', 'tickadj', 'ldconfig', 'selinuxdefcon', 'lvreduce', 'vigr', 'quot', 'vgdisplay', 'lchage', 'arping', 'ibacm', 'ibcheckportstate', 'smparquery', 'insmod', 'addnote', 'lvmetad', 'ibprintca.pl', 'switch_root', 'hwclock', 'kpartx', 'ifstat', 'sysinfo-snapshot.py', 'setsebool', 'edquota', 'killall5', 'pidof', 'anacron', 'service', 'sfdisk', 'vgimport', 'vgrename', 'sm-notify', 'lvmdiskscan', 'lvscan', 'selinuxenabled', 'nologin', 'atd', 'accessdb', 'ibcheckstate', 'userdel', 'lsvio', 'ibnodes', 'weak-modules', 'quotaoff', 'setquota', 'era_invalidate', 'automount', 'xfs_copy', 'sosreport', 'consoletype', 'phc_ctl', 'safe_finger', 'ppc64_cpu', 'mlnx_eswitch_set', 'uesensor', 'rpc.mountd', 'ls-vscsi', 'ibsysstat', 'modprobe', 'ibstatus', 'lgroupadd', 'vgs', 'rtacct', 'pdata_tools', 'telinit', 'setup_mr_cache.sh', 'poweroff', 'lsof', 'slattach', 'visudo', 'ibcheckportwidth', 'update-pciids', 'nscd', 'update_flash', 'smtp-sink', 'mkswap', 'sushell', 'lvmconfig', 'mktree', 'xfs_admin', 'ctstat', 'lvrename', 'ibmirror', 'pam_tally2', 'chkconfig', 'pam_console_apply', 'xfs_io', 'ib2ib_setup', 'nfsdcltrack', 'mksquashfs', 'umount.nfs4', 'arpd', 'rtas_ibm_get_vpd', 'setcap', 'rtas_dbg', 'chroot', 'ibqueryerrors', 'grubby', 'timemaster', 'ibchecknet', 'installkernel', 'vgmerge', 'rpc.idmapd', 'create-munge-key', 'routef', 'mount.nfs', 'pvmove', 'ip6tables', 'postmulti', 'ibnetdiscover', 'key.dns_resolver', 'request-key', 'alsabat-test.sh', 'genhostid', 'ibswportwatch.pl', 'postmap', 'init', 'ibprintswitch.pl', 'ether-wake', 'ifenslave', 'selinux_restorecon', 'fstrim', 'xfs_fsr', 'packer', 'lgroupdel', 'vgcreate', 'mount.nfs4', 'ethtool', 'fsck.cramfs', 'postalias', 'lvextend', 'vgconvert', 'saslpasswd2', 'netreport', 'mkfs.minix', 'cma_roce_mode', 'ibcheckwidth', 'thin_metadata_size', 'faillock', 'thin_rmap', 'ibcheckport', 'pvck', 'postkick', 'ibrouters', 'pvcreate', 'tcpd', 'vgck', 'rpcbind', 'ping6', 'opal-prd', 'thin_delta', 'mii-tool', 'showmount', 'ibccquery', 'devlink', 'set_irq_affinity.sh', 'ibping', 'nfsiostat', 'mlnx_tune', 'hvcsadmin', 'unix_chkpwd', 'getenforce', 'luseradd', 'set_poweron_time', 'semodule', 'convertquota', 'applygnupgdefaults', 'fuser', 'ibccconfig', 'compat_gid_gen'] ['darshan-mk-log-dirs.pl', 'darshan-gen-cc.pl', 'darshan-gen-cxx.pl', 'darshan-gen-fortran.pl', 'darshan-config'] ['htar', '5.0.2.9', '6.0.0.11', '5.0.2.11', 'hsi', '6.2.0.1', 'TA_Status', 'test_TA'] ['esub', 'esub.poe', 'pim', 'lsf_daemons', 'rla', 'elim.jsdl', 'named', 'esub.tv', 'esub.openmp', 'esub.mvapich', 'esub.dprov', 'sbatchd', 'esub.bproc', 'esub.openmpi', 'esub.oldtvpoe', 'esub.mpichp4', 'elim.frequency', 'esub.tvlammpi', 'esub.oldpoe', 'lim', 'esub.ls_dyna', 'esub.tvmpich_gm', 'esub.fluent', 'nios', 'esub.gold', 'esub.mpich_gm', 'esub.pvm', 'esub.intelmpi', 'esub.mpich_mx', 'eauth.krb5', 'res', 'tmp.elim.sa', 'eauth', 'esub.tvpoe', 'mesub', 'esub.mpich2', 'melim', 'esub.lammpi'] ['csm_bb_vg_create', 'csm_node_find_job', 'csm_cluster_query_state', 'csm_allocation_create', 'csm_ib_cable_update', 'csm_allocation_query_active_all', 'csm_bb_lv_delete', 'csm_allocation_update_state', 'csm_switch_attributes_update', 'csm_soft_failure_recovery', 'csm_diag_run_query', 'csm_allocation_step_begin', 'csm_bb_vg_delete', 'csm_node_attributes_query_history', 'csm_allocation_query_details', 'csm_node_attributes_query_details', 'csm_diag_run_query_details', 'csm_ras_event_create', 'csm_diag_run_begin', 'csm_node_resources_query_all', 'csm_allocation_query', 'csm_ras_event_query_allocation', 'csm_switch_attributes_query', 'csm_node_attributes_query', 'csm_switch_attributes_query_details', 'csm_infrastructure_health_check', 'csm_node_attributes_update', 'csm_ras_msg_type_create', 'csm_ras_msg_type_delete', 'csm_ras_msg_type_query', 'csm_node_query_state_history', 'csm_switch_attributes_query_history', 'csm_allocation_step_query_active_all', 'csm_bb_lv_create', 'csm_node_resources_query', 'csm_allocation_delete', 'csm_ras_event_query', 'csm_allocation_resources_query', 'csm_diag_result_create', 'csm_node_delete', 'csm_ras_msg_type_update', 'csm_bb_vg_query', 'csm_ib_cable_query_history', 'csm_diag_run_end', 'csm_allocation_step_query', 'csm_allocation_step_query_details', 'csm_allocation_update_history', 'csm_allocation_step_end', 'csm_ib_cable_query', 'csm_jsrun_cmd', 'csm_bb_lv_query'] [] [] ['decoder'] ['ibmsquit', 'ibis', 'dump2slvl.pl', 'ibdiagpath', 'IBMgtSim', 'dump2psl.pl', 'ibdmchk', 'mkSimNodeDir', 'ibdiagui', 'ibdiagnet', 'RunSimTest', 'ibdmtr', 'ibtopodiff', 'ibdmsh', 'ibnlparse', 'ibmssh'] ['jsrun', 'jswait', 'jskill', 'query_env', 'export_slurm_env', 'jsm_simulator', 'js_task_info', 'admin', 'jsproxy', 'jslist', 'export_smpi_env', 'jsm', 'stock'] ['hiera', 'facter', 'puppet', 'facter-ng.bat'] ['mmtrace', 'mmsysmon.py', 'mmnfsfuncs', 'mmcesnfsmonitor', 'mmjob', 'mmdelcallback', 'tsdf', 'tschfileset', 'tslsdisk', 'tslspolicy', 'tslsfs', 'tsdelsnapshot', 'tslsfileset', 'tsnsdaccess', 'tscrsnapshot', 'tslspool', 'tssnapdir', 'tsedquota', 'tsusercmd', 'tslssnapshot', 'tsstatus', 'mmcrnsd', 'tsgetscsiinfo', 'mmqosnice', 'mmsetquota', 'mmdelfileset', 'tsprpreemptabort', 'cleanupkeystonedb', 'mmsdrfsdef.Linux', 'mmcesuserauthcrservice', 'mmdumpfilocks', 'tschdisk', 'tsaddpdisk', 'tsctl', 'tskafkaauth', 'tsdbfs', 'tscheckquota', 'tsfsctl', 'tsrpldisk', 'tschpdisk', 'tsrecgroupserver', 'tscmd', 'tsreclaimspace', 'tscrrecgroup', 'tschstoragepool', 'tsrestripefs', 'tsdefragfs', 'tsfileid', 'tsdsh', 'tsdeldisk', 'tsquotaon', 'tschfs', 'tsdefedquota', 'tsunmount', 'tsdelpdisk', 'tsressnapshot', 'tscrvdisk', 'tsquotaoff', 'tsexpelnode', 'tslsvdisk', 'tscrfs', 'tschmgr', 'tslsrecgroup', 'tslsrecoverygroupevents', 'tsdelvdisk', 'tsnsddiscover', 'tsdefquotaoff', 'tscrfileset', 'tsdelfs', 'tsdbvdisk', 'tsdelfileset', 'tsadddisk', 'tscachectl', 'tsdefquotaon', 'tschcarrier', 'tsauth', 'tslsqos', 'tslspdisk', 'tsnsdrediscover', 'tsremount', 'tsdelrecgroup', 'tschpool', 'tsrepquota', 'tschqos', 'tschrecgroup', 'tsfsck', 'tsdiag', 'tssbrff', 'mmlsfileset', 'mmexectsmcmd', 'mmgetkafkaspecinfo', 'mmfs', 'mmchconfig', 'ces.snap.py', 'mmperfmon', 'tsgetacl', 'clstrwatchcallbacks', 'mmcessmblsconfig', 'tslsattr', 'mmcesmonitord', '.links', 'mmnfsgrace', 'mmhelp-apolicy', 'mmpmon', 'mmcesnfsdelexport', 'mmchpolicy', 'gui.snap.py', 'tspcache', 'perfmon.snap.py', 'mmsdrquerydef', 'mmlsqos', 'mmxargs', 'tschattr', 'mmclidecode', 'clstrwatchconsumermanager', 'mmfsctl', 'mmpsnap', 'mmccrnv', 'perf.snap.py', 'mmcespnfsip', 'mmnfsnodeback', 'tsimgrestore', 'mmcesuserauthckservice', 'mmchnodeclass', 'pymmcesnfslsexport.py', 'mmdelacl', 'mmumount', 'mmcrnodeclass', 'mmsysmonc', 'tspcacheevict', 'mmexecvfile', 'sshwrap', 'mmgetifconf', 'mmfs-ppc64-rh4', 'sysmon.snap.py', 'mmimgrestore', 'mmcesobjaccesslinkfset', 'mmchecksubsys', 'mmcesop', 'tspmon', 'mmdefedquota', 'mmdelsnapshot', 'mmreclaimspace', 'mmsysmoncontrol', 'tsspectrumdiscover', 'mmyfields', 'mmchnode', 'mmrestorefs', 'mmcallhome', 'mmexportfs', 'mmcesnfsloadexport', 'tslspool34', 'mmnfsmonitor', 'mmsnmpagentd30', 'tsfindinode', 'mmfsfuncs.Linux', 'mmdumpperfdata', 'mmcesobjcrbase', 'mmdsh', 'objmetric_count.py', 'mmauditmount', 'mmcessmblsexport', 'mmdevdiscover', 'mmlsnode', 'mmautoload', 'mmcesnfscrexport', 'mmchnsd', 'mmfileid', 'mmcesnfsfuncs', 'mmcesrecovernode', 'mmlsfs', 'mmcollectdebugdata', 'tseditacl', 'tsbuhelper', 'tslinkfileset', 'tspreparedisk', 'mmrpldisk', 'mmdelnode', 'mmceslog', 'mmcrfsc', 'mmcesblockfuncs', 'mmgensymtable', 'mmfsd', 'mmnfsinstall', 'mmdspmsg', 'mmclone', 'mmchfs', 'mmlsdisk', 'mmnfstakeover', 'tsyselect', 'mmnfsup', 'mmcessmbcrexport', 'tsaddrmap', 'mmnetverify', 'mmchpool', 'msgqueue.snap.py', 'mmcesobjlscfg', 'tsrestorefileset', 'mmbuildgpl', 'mmsmbman', 'tsfindname', 'mmcesloadmonitor', 'mmcesobjaccess', 'mmaddcallback', 'mmcesobjpolicyfuncs', 'mmcessmbdelexport', 'msgqueueDaemonManager', 'core.snap.py', 'tsgskkm', 'mmauth', 'mmedquota', 'mmshutdown', 'tsdbmemleakparse', 'mmadquery', 'mmsdrcli', 'mmccr', 'mmcesobjchstoragepolicy', 'mmcesnfschcfg', 'tswatchmonitor', 'mmmigratefs', 'mmputacl', 'mmlscluster', 'commonsnap.py', 'mmcesservice', 'mmadddisk', 'tslsmgr', 'tssbrindex', 'mmafmlocal', 'mmlsperfdata', 'mmnfsuninstall', 'mmcmi', 'mmcesobjs3', 'tspcachescan', 'kdump-4.14.0-115.14.1.el7a.ppc64le', 'mmlsnsd', 'mmchcluster', 'mmunmount', 'mmnfsquorumloss', 'mmcesnetdeladdress', 'mmlsquota', 'mmces', 'pymmcesnfsfuncs.py', 'tsputacl', 'mmchqos', 'tsprshowfence', 'gpfsrunlevel', 'mmimgbackup', 'mmsdrrestore', 'tsqosnice', 'mmsdrserv', 'mmmsgqueue', 'mmcesmmcdelexport', 'mmlinkfileset', 'mmrestoreconfig', 'mmdelnodeclass', 'mmsmbfuncs', 'mmcesobjcfgman', 'mmfixcfg', 'mmcesnfslsexport', 'tsdbmemleak', 'mmaudit', 'mmcesnfslscfg', 'mmsmbsupportedoptions', 'mmafmconfig', 'mmlscallback', 'mmlsmgr', 'tsbackup', 'mmcesminfuncs', 'mmfsmount', 'mmcesmmcchexport', 'tsrestripefile', 'kdump', 'mmimportfs', 'mmcesobjcrring', 'mmnfs', 'mmcommon', 'mmcesnetmvaddress', 'mmsnmpagentd', 'mmcesobjfuncs', 'gui.callhome.py', 'tsbackup33', 'lxtrace', 'mmsdrfsdef', 'mmsmb', 'mmobj', 'tsprclear', 'mmceshdfsfuncs', 'mmcesnetworkmonitor', 'tspcacheutil', 'mmqos', 'mmlspolicy', 'mmrestripefs', 'mmcessmbfuncs', 'mmaddnode', 'mmblock', 'mmcrfs', 'mmmount', 'tsprreadres', 'mmnsddiscover', 'mmprotocoltrace', 'mmglobfuncs', 'tsprreadkeys', 'mmnfsdown', 'gpfs.snap', 'object.snap.py', 'mmcesnetaddaddress', 'mmcesobjchcfg', 'mmrsh', 'mmcesobjmr', 'mmeditacl', 'auditConsumerManager', 'mmlsconfig', 'mmsync', 'mmgetacl', 'mmcesuserauthrmservice', 'mmhealth', 'tsdelacl', 'mmremote', 'mmpercentencode', 'mmcloudfuncs', 'daemonize', 'mmcesnfschexport', 'tsclone', 'callhome.snap.py', 'clstrwatchreplaymanager', 'tsnetverify', 'mmstartup', 'mmcachectl', 'mmgskkm', 'mmdefragfs', 'mmsnapdir', 'tsapolicy', 'mmrcmd', 'mmexpelnode', 'mmsdrquery', 'ece.callhome.py', 'mmchdisk', 'mmcesnetdown', 'mmlslicense', 'mmrestripefile', 'mmcrfileset', 'mmnfscleanup', 'mmlogmsg', 'mmcessmbexportacl', 'mmchlicense', 'mmsetrcmd', 'tsclwatchrules', 'mmdynamicmap', 'tssetquota', 'tsprreserve', 'wftopics', 'mmvaryonvg', 'mmsnmpagentd10', 'mmbackupconfig', 'mmdefquotaon', 'mmlsattr', 'mmcesfuncs', 'mmfsadm', 'mmcesmmccrexport', 'runmmfs', 'mmafmcmd', 'ccrrestore', 'mmunlinkfileset', 'basicsnap.py', 'mmafmhomeconfig', 'auth.snap.py', 'fab3.snap.py', 'mmuserauth', 'object.callhome.py', 'mmlogsort', 'mmdf', 'mmcesobjcrstoragepolicy', 'mmdefquotaoff', 'mmtracectl', 'mmdump', 'tsprquery', 'mmfsenv', 'mmfsfuncs', 'mmrepquota', 'mmcesdr', 'mmcesnode', 'tslsquota', 'mmdsm', 'mmdelnsd', 'mmnfsinit', 'mmcrsnapshot', 'mmlockf', 'mmcesauthfuncs', 'network.callhome.py', 'mmglobfuncs.Linux', 'tsprinquiry', 'nfs.snap.py', 'mmcesnetlsaddress', 'mmapplypolicy', 'mmdumpkthreads', 'tswatchgpfsconduit', 'mmcessmbchconfig', 'perfmon.callhome.py', 'mmauditpreunmount', 'mmrcp', 'scpwrap', 'mmremotefs', 'tsunlinkfileset', 'mmcrcluster', 'mmnfspreunmount', 'mmcessmbchexport', 'tsauditconsumer', 'mmchattr', 'mmdeldisk', 'mmfsck', 'smb.snap.py', 'mmcesobjdepstoragepolicy', 'mmcheckquota', 'mmprodname', 'mmdelfs', 'mmcallhremote', 'mmgetstate', 'mmcesuserauthlsservice', 'mmcesnetup', 'mmremotecluster', 'tsstarthelper', 'mmcloudgateway', 'mmgetconfdata', 'tschpolicy', 'mmchmgr', 'mmcesnetchaddress', 'mmsmbvalidoptions', 'mmchfileset', 'mmwatch', 'tsprregister', 'mmstartpolicy', 'hadoop.snap.py', 'mmquotaoff', 'mmcesmonitor', 'mmquotaon', 'msgqueueservicesmonitormanager', 'mmlspool', 'mmlsmount', 'mmccrmonitor', 'mmbackup', 'mmlsnodeclass', 'lxtrace-4.14.0-115.14.1.el7a.ppc64le', 'mmrefresh', 'mmnfsrecovernode', 'mmpercentdecode', 'wftopichk', 'tspcachesnapdiff', 'mmdiag', 'mmlssnapshot', 'mmcesobjlsstoragepolicy', 'mmafmctl', 'mmstatdcallout', 'mmksh', 'sshscpwrap'] Path provided by --with-executables-search-path ['win32fe.exe', 'win32feutils.dll'] child config.packages.c2html 0.009377 ================================================================================ TEST alternateConfigureLibrary from config.packages.boost(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.boost(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.boost 0.000763 ================================================================================ TEST alternateConfigureLibrary from config.packages.silo(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.silo(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.silo 0.000747 ================================================================================ TEST alternateConfigureLibrary from config.packages.Random123(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.Random123(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.Random123 0.000748 ================================================================================ TEST alternateConfigureLibrary from config.packages.PARTY(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.PARTY(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.PARTY 0.000734 ================================================================================ TEST alternateConfigureLibrary from config.packages.Matlab(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.Matlab(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.Matlab 0.000596 ================================================================================ TEST alternateConfigureLibrary from config.packages.MatlabEngine(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.MatlabEngine(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.MatlabEngine 0.000644 ================================================================================ TEST alternateConfigureLibrary from config.packages.Mathematica(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.Mathematica(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.Mathematica 0.000646 ================================================================================ TEST checkDependencies from config.packages.regex(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:837) TESTING: checkDependencies from config.packages.regex(config/BuildSystem/config/package.py:837) ================================================================================ TEST configureLibrary from config.packages.regex(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:862) TESTING: configureLibrary from config.packages.regex(config/BuildSystem/config/package.py:862) Find an installation and check if it can work with PETSc ================================================================================== Checking for a functional regex Checking for library in Compiler specific search REGEX: [] ================================================================================ TEST check from config.libraries(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/libraries.py:157) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:157) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [regexec regcomp regfree] in library [] [] Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.libraries/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.libraries -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char regexec(); static void _check_regexec() { regexec(); } char regcomp(); static void _check_regcomp() { regcomp(); } char regfree(); static void _check_regfree() { regfree(); } int main() { _check_regexec(); _check_regcomp(); _check_regfree();; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.libraries/conftest -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.o -lstdc++ -ldl Checking for optional headers [] in Compiler specific search REGEX: [] ================================================================================ TEST checkInclude from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files [] in [] Found header files [] in [] Checking for headers ['regex.h'] in Compiler specific search REGEX: [] ================================================================================ TEST checkInclude from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['regex.h'] in [] Checking include with compiler flags var CPPFLAGS [] Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Found header files ['regex.h'] in [] ================================================================================ TEST checkVersion from config.packages.regex(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:986) TESTING: checkVersion from config.packages.regex(config/BuildSystem/config/package.py:986) Uses self.version, self.minversion, self.maxversion, self.versionname, and self.versioninclude to determine if package has required version ================================================================================ TEST checkSharedLibrary from config.packages.regex(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:920) TESTING: checkSharedLibrary from config.packages.regex(config/BuildSystem/config/package.py:920) By default we don't care about checking if the library is shared child config.packages.regex 1.081154 ================================================================================ TEST checkDependencies from config.packages.cuda(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:837) TESTING: checkDependencies from config.packages.cuda(config/BuildSystem/config/package.py:837) ================================================================================ TEST configureLibrary from config.packages.cuda(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/packages/cuda.py:77) TESTING: configureLibrary from config.packages.cuda(config/BuildSystem/config/packages/cuda.py:77) ================================================================================== Checking for a functional cuda All intermediate test results are stored in /tmp/petsc-zrcSd3/config.packages.cuda Checking for program /sw/sources/lsf-tools/2.0/summit/bin/nvcc...not found Checking for program /sw/summit/xalt/1.2.0/bin/nvcc...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/bin/nvcc...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/cmake-3.15.2-xit2o3iepxvqbyku77lwcugufilztu7t/bin/nvcc...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/bin/nvcc...not found Checking for program /sw/summit/forge/20.0.1/bin/nvcc...not found Checking for program /sw/summit/cuda/10.1.243/bin/nvcc...found Defined make macro "SYSTEMNVCC" to "/sw/summit/cuda/10.1.243/bin/nvcc" CUDA: DirPath not found.. skipping: /sw/summit/cuda/10.1.243/lib Checking for library in Package specific search directory CUDA: ['/sw/summit/cuda/10.1.243/lib64/libcufft.a', 'libcublas.a', 'libcudart.a', 'libcusparse.a', 'libcusolver.a'] Contents: ['rpm', 'LICENSE', 'README', 'bin', 'compat', 'doc', 'extras', 'include', 'lib64', 'libnsight', 'libnvvp', 'nsightee_plugins', 'nvml', 'nvvm', 'samples', 'share', 'targets', 'tools', 'version.txt', 'nsight-systems', 'nsight-compute'] ================================================================================ TEST check from config.libraries(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/libraries.py:157) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:157) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [cublasInit cufftDestroy] in library ['/sw/summit/cuda/10.1.243/lib64/libcufft.a', 'libcublas.a', 'libcudart.a', 'libcusparse.a', 'libcusolver.a'] [] Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.libraries/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.libraries -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char cublasInit(); static void _check_cublasInit() { cublasInit(); } char cufftDestroy(); static void _check_cufftDestroy() { cufftDestroy(); } int main() { _check_cublasInit(); _check_cufftDestroy();; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.libraries/conftest -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.o -Wl,-rpath,/sw/summit/cuda/10.1.243/lib64 -L/sw/summit/cuda/10.1.243/lib64 -lcufft -lcublas -lcudart -lcusparse -lcusolver -lstdc++ -ldl Defined "HAVE_LIBCUFFT" to "1" Defined "HAVE_LIBCUBLAS" to "1" Defined "HAVE_LIBCUDART" to "1" Defined "HAVE_LIBCUSPARSE" to "1" Defined "HAVE_LIBCUSOLVER" to "1" Checking for optional headers [] in Package specific search directory CUDA: ['/sw/summit/cuda/10.1.243/include'] ================================================================================ TEST checkInclude from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files [] in ['/sw/summit/cuda/10.1.243/include'] Found header files [] in ['/sw/summit/cuda/10.1.243/include'] Checking for headers ['cublas.h', 'cufft.h', 'cusparse.h', 'cusolverDn.h', 'thrust/version.h'] in Package specific search directory CUDA: ['/sw/summit/cuda/10.1.243/include'] ================================================================================ TEST checkInclude from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['cublas.h', 'cufft.h', 'cusparse.h', 'cusolverDn.h', 'thrust/version.h'] in ['/sw/summit/cuda/10.1.243/include'] Checking include with compiler flags var CPPFLAGS ['/sw/summit/cuda/10.1.243/include'] Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.headers -I/sw/summit/cuda/10.1.243/include /tmp/petsc-zrcSd3/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Checking include with compiler flags var CPPFLAGS ['/sw/summit/cuda/10.1.243/include'] Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.headers -I/sw/summit/cuda/10.1.243/include /tmp/petsc-zrcSd3/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Checking include with compiler flags var CPPFLAGS ['/sw/summit/cuda/10.1.243/include'] Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.headers -I/sw/summit/cuda/10.1.243/include /tmp/petsc-zrcSd3/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Checking include with compiler flags var CPPFLAGS ['/sw/summit/cuda/10.1.243/include'] Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.headers -I/sw/summit/cuda/10.1.243/include /tmp/petsc-zrcSd3/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Checking include with compiler flags var CPPFLAGS ['/sw/summit/cuda/10.1.243/include'] Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.headers -I/sw/summit/cuda/10.1.243/include /tmp/petsc-zrcSd3/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Found header files ['cublas.h', 'cufft.h', 'cusparse.h', 'cusolverDn.h', 'thrust/version.h'] in ['/sw/summit/cuda/10.1.243/include'] Checking for size of type: teststruct Running Executable WITHOUT threads to time it out Executing: nvcc -c -o /tmp/petsc-zrcSd3/config.types/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.types -ccbin pgc++ -I/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/include -Wno-deprecated-gpu-targets /tmp/petsc-zrcSd3/config.types/conftest.cu Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #include #include typedef struct {double a; int b;} teststruct; char assert_sizeof[(sizeof(teststruct)==16)*2-1]; Checking for size of type: teststruct Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.types/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -g -fast /tmp/petsc-zrcSd3/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #include #include typedef struct {double a; int b;} teststruct; char assert_sizeof[(sizeof(teststruct)==16)*2-1]; Checking if sizeof(void*) in CUDA is the same as with regular compiler Checking for size of type: void * Running Executable WITHOUT threads to time it out Executing: nvcc -c -o /tmp/petsc-zrcSd3/config.types/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.types -ccbin pgc++ -I/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/include -Wno-deprecated-gpu-targets /tmp/petsc-zrcSd3/config.types/conftest.cu Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #include #include char assert_sizeof[(sizeof(void *)==8)*2-1]; Defined "HAVE_CUDA" to "1" ================================================================================ TEST checkVersion from config.packages.cuda(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:986) TESTING: checkVersion from config.packages.cuda(config/BuildSystem/config/package.py:986) Uses self.version, self.minversion, self.maxversion, self.versionname, and self.versioninclude to determine if package has required version Preprocessing source: #include "confdefs.h" #include "conffix.h" #include "cuda.h" ;petscpkgver(CUDA_VERSION); Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.packages.cuda -I/sw/summit/cuda/10.1.243/include /tmp/petsc-zrcSd3/config.packages.cuda/conftest.c For cuda need 7.5 <= 10.1 <= ================================================================================ TEST checkSharedLibrary from config.packages.cuda(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:920) TESTING: checkSharedLibrary from config.packages.cuda(config/BuildSystem/config/package.py:920) By default we don't care about checking if the library is shared child config.packages.cuda 5.554867 child config.packages.cxxlibs 0.000014 ================================================================================ TEST alternateConfigureLibrary from config.packages.opengl(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.opengl(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.opengl 0.000773 ================================================================================ TEST alternateConfigureLibrary from config.packages.glut(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.glut(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.glut 0.000661 ================================================================================ TEST alternateConfigureLibrary from config.packages.X(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.X(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.X 0.000657 ================================================================================ TEST alternateConfigureLibrary from config.packages.GLVis(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.GLVis(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.GLVis 0.000748 ================================================================================ TEST alternateConfigureLibrary from config.packages.CoDiPack(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.CoDiPack(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.CoDiPack 0.000735 ================================================================================ TEST alternateConfigureLibrary from config.packages.adblaslapack(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.adblaslapack(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.adblaslapack 0.000733 ================================================================================ TEST alternateConfigureLibrary from config.packages.ADOLC(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.ADOLC(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.ADOLC 0.000730 ================================================================================ TEST locateCMake from config.packages.cmake(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/packages/cmake.py:39) TESTING: locateCMake from config.packages.cmake(config/BuildSystem/config/packages/cmake.py:39) Looking for default CMake executable Checking for program /sw/sources/lsf-tools/2.0/summit/bin/cmake...not found Checking for program /sw/summit/xalt/1.2.0/bin/cmake...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/bin/cmake...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/cmake-3.15.2-xit2o3iepxvqbyku77lwcugufilztu7t/bin/cmake...found Defined make macro "CMAKE" to "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/cmake-3.15.2-xit2o3iepxvqbyku77lwcugufilztu7t/bin/cmake" Looking for default CTest executable Checking for program /sw/sources/lsf-tools/2.0/summit/bin/ctest...not found Checking for program /sw/summit/xalt/1.2.0/bin/ctest...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/bin/ctest...not found Checking for program /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/cmake-3.15.2-xit2o3iepxvqbyku77lwcugufilztu7t/bin/ctest...found Defined make macro "CTEST" to "/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/cmake-3.15.2-xit2o3iepxvqbyku77lwcugufilztu7t/bin/ctest" Running Executable WITHOUT threads to time it out Executing: /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/cmake-3.15.2-xit2o3iepxvqbyku77lwcugufilztu7t/bin/cmake --version stdout: cmake version 3.15.2 CMake suite maintained and supported by Kitware (kitware.com/cmake). cmake version found 3.15.2 child config.packages.cmake 0.018283 ================================================================================ TEST alternateConfigureLibrary from config.packages.googletest(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.googletest(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.googletest 0.001395 ================================================================================ TEST alternateConfigureLibrary from config.packages.unittestcpp(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.unittestcpp(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.unittestcpp 0.001217 ================================================================================ TEST alternateConfigureLibrary from config.packages.eigen(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.eigen(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.eigen 0.001193 ================================================================================ TEST alternateConfigureLibrary from config.packages.szlib(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.szlib(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.szlib 0.001123 ================================================================================ TEST alternateConfigureLibrary from config.packages.zlib(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.zlib(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.zlib 0.000744 child config.packages.mathlib 0.000014 ================================================================================ TEST alternateConfigureLibrary from config.packages.tetgen(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.tetgen(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.tetgen 0.000741 ================================================================================ TEST alternateConfigureLibrary from config.packages.tchem(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.tchem(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.tchem 0.000736 ================================================================================ TEST alternateConfigureLibrary from config.packages.saws(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.saws(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.saws 0.000735 ================================================================================ TEST alternateConfigureLibrary from config.packages.libpng(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.libpng(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.libpng 0.000737 ================================================================================ TEST alternateConfigureLibrary from config.packages.combblas(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.combblas(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.combblas 0.000730 ================================================================================ TEST alternateConfigureLibrary from config.packages.Triangle(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.Triangle(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.Triangle 0.000731 ================================================================================ TEST checkDependencies from config.packages.metis(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:837) TESTING: checkDependencies from config.packages.metis(config/BuildSystem/config/package.py:837) ================================================================================ TEST configureLibrary from config.packages.metis(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/packages/metis.py:49) TESTING: configureLibrary from config.packages.metis(config/BuildSystem/config/packages/metis.py:49) ================================================================================== Checking for a functional metis Looking for METIS at git.metis, hg.metis or a directory starting with ['petsc-pkg-metis'] Could not locate an existing copy of METIS: ['git.sowing'] Downloading metis =============================================================================== Trying to download git://https://bitbucket.org/petsc/pkg-metis.git for METIS =============================================================================== Running Executable WITHOUT threads to time it out Executing: git clone https://bitbucket.org/petsc/pkg-metis.git /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.metis stdout: Cloning into '/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.metis'... Looking for METIS at git.metis, hg.metis or a directory starting with ['petsc-pkg-metis'] Found a copy of METIS in git.metis Running Executable WITHOUT threads to time it out Executing: ['git', 'rev-parse', '--git-dir'] stdout: .git Running Executable WITHOUT threads to time it out Executing: ['git', 'cat-file', '-e', 'v5.1.0-p8^{commit}'] Running Executable WITHOUT threads to time it out Executing: ['git', 'rev-parse', 'v5.1.0-p8'] stdout: ca7a59e6283f608d3e0d8a9d500838afb7f4339a Running Executable WITHOUT threads to time it out Executing: ['git', '-c', 'user.name=petsc-configure', '-c', 'user.email=petsc@configure', 'stash'] stdout: No local changes to save Running Executable WITHOUT threads to time it out Executing: ['git', 'clean', '-f', '-d', '-x'] Running Executable WITHOUT threads to time it out Executing: ['git', 'checkout', '-f', 'ca7a59e6283f608d3e0d8a9d500838afb7f4339a'] METIS was just downloaded, forcing a rebuild because cannot determine if package has changed =============================================================================== Configuring METIS with cmake, this may take several minutes =============================================================================== Running Executable WITHOUT threads to time it out Executing: /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/cmake-3.15.2-xit2o3iepxvqbyku77lwcugufilztu7t/bin/cmake .. -DCMAKE_INSTALL_PREFIX=/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda -DCMAKE_VERBOSE_MAKEFILE=1 -DCMAKE_C_COMPILER="mpicc" -DCMAKE_AR=/usr/bin/ar -DCMAKE_RANLIB=/usr/bin/ranlib -DCMAKE_C_FLAGS:STRING="-g -fast" -DCMAKE_C_FLAGS_DEBUG:STRING="-g -fast" -DCMAKE_C_FLAGS_RELEASE:STRING="-g -fast" -DCMAKE_CXX_COMPILER="mpiCC" -DCMAKE_CXX_FLAGS:STRING="-g -fast -std=c++11" -DCMAKE_CXX_FLAGS_DEBUG:STRING="-g -fast -std=c++11" -DCMAKE_CXX_FLAGS_RELEASE:STRING="-g -fast -std=c++11" -DCMAKE_Fortran_COMPILER="mpif90" -DCMAKE_Fortran_FLAGS:STRING="-g -fast" -DCMAKE_Fortran_FLAGS_DEBUG:STRING="-g -fast" -DCMAKE_Fortran_FLAGS_RELEASE:STRING="-g -fast" -DBUILD_SHARED_LIBS=on -DGKLIB_PATH=../GKlib -DGKRAND=1 -DSHARED=1 -DMETIS_USE_LONGINDEX=1 -DMATH_LIB="" stdout: -- The C compiler identification is PGI 19.9.0 -- Check for working C compiler: /autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/bin/mpicc -- Check for working C compiler: /autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/bin/mpicc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Looking for execinfo.h -- Looking for execinfo.h - found -- Looking for getline -- Looking for getline - found -- Configuring done -- Generating done -- Build files have been written to: /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.metis/petsc-build =============================================================================== Compiling and installing METIS; this may take several minutes =============================================================================== Running Executable WITHOUT threads to time it out Executing: /usr/bin/gmake -j59 -l166.4 stdout: /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/cmake-3.15.2-xit2o3iepxvqbyku77lwcugufilztu7t/bin/cmake -S/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.metis -B/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.metis/petsc-build --check-build-system CMakeFiles/Makefile.cmake 0 /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/cmake-3.15.2-xit2o3iepxvqbyku77lwcugufilztu7t/bin/cmake -E cmake_progress_start /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.metis/petsc-build/CMakeFiles /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.metis/petsc-build/CMakeFiles/progress.marks /usr/bin/gmake -f CMakeFiles/Makefile2 all gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.metis/petsc-build' /usr/bin/gmake -f libmetis/CMakeFiles/metis.dir/build.make libmetis/CMakeFiles/metis.dir/depend gmake[2]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.metis/petsc-build' cd /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.metis/petsc-build && /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/cmake-3.15.2-xit2o3iepxvqbyku77lwcugufilztu7t/bin/cmake -E cmake_depends "Unix Makefiles" /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.metis /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.metis/libmetis /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.metis/petsc-build /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.metis/petsc-build/libmetis /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.metis/petsc-build/libmetis/CMakeFiles/metis.dir/DependInfo.cmake --color= Scanning dependencies of target metis gmake[2]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.metis/petsc-build' /usr/bin/gmake -f libmetis/CMakeFiles/metis.dir/build.make libmetis/CMakeFiles/metis.dir/build gmake[2]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.metis/petsc-build' [ 4%] Building C object libmetis/CMakeFiles/metis.dir/__/GKlib/b64.c.o [ 4%] Building C object libmetis/CMakeFiles/metis.dir/__/GKlib/blas.c.o cd /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.metis/petsc-build/libmetis && /autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/bin/mpicc -Dmetis_EXPORTS -I/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.metis/GKlib -I/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.metis/include -I/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.metis/libmetis/. -I/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.metis/petsc-build/include -g -fast -DLINUX -D_FILE_OFFSET_BITS=64 -DNDEBUG -DNDEBUG2 -DUSE_GKRAND -DHAVE_EXECINFO_H -DHAVE_GETLINE -fPIC -o CMakeFiles/metis.dir/__/GKlib/b64.c.o -c /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.metis/GKlib/b64.c cd /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.metis/petsc-build/libmetis && /autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/bin/mpicc -Dmetis_EXPORTS -I/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.metis/GKlib -I/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.metis/include -I/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.metis/libmetis/. -I/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.metis/petsc-build/include -g -fast -DLINUX -D_FILE_OFFSET_BITS=64 -DNDEBUG -DNDEBUG2 -DUSE_GKRAND -DHAVE_EXECINFO_H -DHAVE_GETLINE -fPIC -o CMakeFiles/metis.dir/__/GKlib/blas.c.o -c /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.metis/GKlib/blas.c [ 8%] Building C object libmetis/CMakeFiles/metis.dir/__/GKlib/csr.c.o cd /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.metis/petsc-build/libmetis && /autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/bin/mpicc -Dmetis_EXPORTS -I/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.metis/GKlib -I/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.metis/include -I/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.metis/libmetis/. -I/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.metis/petsc-build/include -g -fast -DLINUX -D_FILE_OFFSET_BITS=64 -DNDEBUG -DNDEBUG2 -DUSE_GKRAND -DHAVE_EXECINFO_H -DHAVE_GETLINE -fPIC -o CMakeFiles/metis.dir/__/GKlib/csr.c.o -c /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.metis/GKlib/csr.c [ 9%] Building C object libmetis/CMakeFiles/metis.dir/__/GKlib/error.c.o [ 9%] Building C object libmetis/CMakeFiles/metis.dir/__/GKlib/fkvkselect.c.o cd /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.metis/petsc-build/libmetis && /autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/bin/mpicc -Dmetis_EXPORTS -I/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.metis/GKlib -I/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.metis/include -I/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.metis/libmetis/. -I/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.metis/petsc-build/include -g -fast -DLINUX -D_FILE_OFFSET_BITS=64 -DNDEBUG -DNDEBUG2 -DUSE_GKRAND -DHAVE_EXECINFO_H -DHAVE_GETLINE -fPIC -o CMakeFiles/metis.dir/__/GKlib/error.c.o -c 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-I/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.metis/GKlib -I/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.metis/include -I/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.metis/libmetis/. -I/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.metis/petsc-build/include -g -fast -DLINUX -D_FILE_OFFSET_BITS=64 -DNDEBUG -DNDEBUG2 -DUSE_GKRAND -DHAVE_EXECINFO_H -DHAVE_GETLINE -fPIC -o CMakeFiles/metis.dir/srefine.c.o -c /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.metis/libmetis/srefine.c cd /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.metis/petsc-build/libmetis && 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-- Install configuration: "" -- Installing: /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/include/metis.h -- Installing: /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/include/gklib_tls.h -- Installing: /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/lib/libmetis.so -- Installing: /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/include/gklib_defs.h -- Installing: /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/include/gklib_rename.h ********Output of running make on METIS follows ******* -- The C compiler identification is PGI 19.9.0 -- Check for working C compiler: /autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/bin/mpicc -- Check for working C compiler: 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/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.metis/petsc-build/libmetis /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.metis/petsc-build/libmetis/CMakeFiles/metis.dir/DependInfo.cmake --color= gmake[2]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.metis/petsc-build' /usr/bin/gmake -f libmetis/CMakeFiles/metis.dir/build.make libmetis/CMakeFiles/metis.dir/build gmake[2]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.metis/petsc-build' gmake[2]: Nothing to be done for `libmetis/CMakeFiles/metis.dir/build'. gmake[2]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.metis/petsc-build' [100%] Built target metis gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.metis/petsc-build' /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/cmake-3.15.2-xit2o3iepxvqbyku77lwcugufilztu7t/bin/cmake -E cmake_progress_start /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.metis/petsc-build/CMakeFiles 0 /usr/bin/gmake -f CMakeFiles/Makefile2 preinstall gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.metis/petsc-build' gmake[1]: Nothing to be done for `preinstall'. gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.metis/petsc-build' Install the project... /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/cmake-3.15.2-xit2o3iepxvqbyku77lwcugufilztu7t/bin/cmake -P cmake_install.cmake -- Install configuration: "" -- Installing: /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/include/metis.h -- Installing: /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/include/gklib_tls.h -- Installing: /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/lib/libmetis.so -- Installing: /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/include/gklib_defs.h -- Installing: /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/include/gklib_rename.h********End of Output of running make on METIS ******* Checking for library in Download METIS: ['/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/lib/libmetis.a'] Contents: ['include', 'lib', 'bin', 'externalpackages', 'share'] ================================================================================ TEST check from config.libraries(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/libraries.py:157) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:157) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [METIS_PartGraphKway] in library ['/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/lib/libmetis.a'] [] Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.libraries/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char METIS_PartGraphKway(); static void _check_METIS_PartGraphKway() { METIS_PartGraphKway(); } int main() { _check_METIS_PartGraphKway();; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.libraries/conftest -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.o -Wl,-rpath,/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/lib -L/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/lib -lmetis -lstdc++ -ldl Defined "HAVE_LIBMETIS" to "1" Checking for optional headers [] in Download METIS: ['/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/include'] ================================================================================ TEST checkInclude from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files [] in ['/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/include'] Found header files [] in ['/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/include'] Checking for headers ['metis.h'] in Download METIS: ['/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/include'] ================================================================================ TEST checkInclude from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['metis.h'] in ['/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/include'] Checking include with compiler flags var CPPFLAGS ['/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/include'] Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.packages.cuda -I/tmp/petsc-zrcSd3/config.headers -I/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/include /tmp/petsc-zrcSd3/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Found header files ['metis.h'] in ['/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/include'] All intermediate test results are stored in /tmp/petsc-zrcSd3/config.packages.metis Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.packages.metis/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.packages.metis -g -fast -I/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/include /tmp/petsc-zrcSd3/config.packages.metis/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include "metis.h" int main() { #if (IDXTYPEWIDTH != 64) #error incompatible IDXTYPEWIDTH #endif; return 0; } ================================================================================ TEST checkVersion from config.packages.metis(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:986) TESTING: checkVersion from config.packages.metis(config/BuildSystem/config/package.py:986) Uses self.version, self.minversion, self.maxversion, self.versionname, and self.versioninclude to determine if package has required version Preprocessing source: #include "confdefs.h" #include "conffix.h" #include "metis.h" ;petscpkgver(METIS_VER_MAJOR.METIS_VER_MINOR.METIS_VER_SUBMINOR); Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.packages.cuda -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.packages.metis -I/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/include /tmp/petsc-zrcSd3/config.packages.metis/conftest.c For metis need <= 5.1.0 <= ================================================================================ TEST checkSharedLibrary from config.packages.metis(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:920) TESTING: checkSharedLibrary from config.packages.metis(config/BuildSystem/config/package.py:920) By default we don't care about checking if the library is shared child config.packages.metis 15.051584 ================================================================================ TEST alternateConfigureLibrary from config.packages.pragmatic(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.pragmatic(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.pragmatic 0.000878 ================================================================================ TEST checkDependencies from config.packages.parmetis(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:837) TESTING: checkDependencies from config.packages.parmetis(config/BuildSystem/config/package.py:837) ================================================================================ TEST configureLibrary from config.packages.parmetis(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/packages/parmetis.py:41) TESTING: configureLibrary from config.packages.parmetis(config/BuildSystem/config/packages/parmetis.py:41) ================================================================================== Checking for a functional parmetis Looking for PARMETIS at git.parmetis, hg.parmetis or a directory starting with ['petsc-pkg-parmetis'] Could not locate an existing copy of PARMETIS: ['git.sowing', 'git.metis'] Downloading parmetis =============================================================================== Trying to download git://https://bitbucket.org/petsc/pkg-parmetis.git for PARMETIS =============================================================================== Running Executable WITHOUT threads to time it out Executing: git clone https://bitbucket.org/petsc/pkg-parmetis.git /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.parmetis stdout: Cloning into '/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.parmetis'... Looking for PARMETIS at git.parmetis, hg.parmetis or a directory starting with ['petsc-pkg-parmetis'] Found a copy of PARMETIS in git.parmetis Running Executable WITHOUT threads to time it out Executing: ['git', 'rev-parse', '--git-dir'] stdout: .git Running Executable WITHOUT threads to time it out Executing: ['git', 'cat-file', '-e', 'v4.0.3-p6^{commit}'] Running Executable WITHOUT threads to time it out Executing: ['git', 'rev-parse', 'v4.0.3-p6'] stdout: 475d8facbb324527c205f1f78a7c90bd160bddcd Running Executable WITHOUT threads to time it out Executing: ['git', '-c', 'user.name=petsc-configure', '-c', 'user.email=petsc@configure', 'stash'] stdout: No local changes to save Running Executable WITHOUT threads to time it out Executing: ['git', 'clean', '-f', '-d', '-x'] Running Executable WITHOUT threads to time it out Executing: ['git', 'checkout', '-f', '475d8facbb324527c205f1f78a7c90bd160bddcd'] PARMETIS was just downloaded, forcing a rebuild because cannot determine if package has changed =============================================================================== Configuring PARMETIS with cmake, this may take several minutes =============================================================================== Running Executable WITHOUT threads to time it out Executing: /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/cmake-3.15.2-xit2o3iepxvqbyku77lwcugufilztu7t/bin/cmake .. -DCMAKE_INSTALL_PREFIX=/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda -DCMAKE_VERBOSE_MAKEFILE=1 -DCMAKE_C_COMPILER="mpicc" -DCMAKE_AR=/usr/bin/ar -DCMAKE_RANLIB=/usr/bin/ranlib -DCMAKE_C_FLAGS:STRING="-g -fast" -DCMAKE_C_FLAGS_DEBUG:STRING="-g -fast" -DCMAKE_C_FLAGS_RELEASE:STRING="-g -fast" -DCMAKE_CXX_COMPILER="mpiCC" -DCMAKE_CXX_FLAGS:STRING="-g -fast -std=c++11" -DCMAKE_CXX_FLAGS_DEBUG:STRING="-g -fast -std=c++11" -DCMAKE_CXX_FLAGS_RELEASE:STRING="-g -fast -std=c++11" -DCMAKE_Fortran_COMPILER="mpif90" -DCMAKE_Fortran_FLAGS:STRING="-g -fast" -DCMAKE_Fortran_FLAGS_DEBUG:STRING="-g -fast" -DCMAKE_Fortran_FLAGS_RELEASE:STRING="-g -fast" -DBUILD_SHARED_LIBS=on -DGKLIB_PATH=../headers -DMETIS_PATH=/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda -DSHARED=1 -DCMAKE_INSTALL_RPATH_USE_LINK_PATH:BOOL=ON -DMETIS_USE_LONGINDEX=1 stdout: -- The C compiler identification is PGI 19.9.0 -- Check for working C compiler: /autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/bin/mpicc -- Check for working C compiler: /autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/bin/mpicc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Configuring done -- Generating done -- Build files have been written to: /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.parmetis/petsc-build =============================================================================== Compiling and installing PARMETIS; this may take several minutes =============================================================================== Running Executable WITHOUT threads to time it out Executing: /usr/bin/gmake -j59 -l166.4 stdout: /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/cmake-3.15.2-xit2o3iepxvqbyku77lwcugufilztu7t/bin/cmake -S/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.parmetis -B/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.parmetis/petsc-build --check-build-system CMakeFiles/Makefile.cmake 0 /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/cmake-3.15.2-xit2o3iepxvqbyku77lwcugufilztu7t/bin/cmake -E cmake_progress_start /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.parmetis/petsc-build/CMakeFiles /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.parmetis/petsc-build/CMakeFiles/progress.marks /usr/bin/gmake -f CMakeFiles/Makefile2 all gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.parmetis/petsc-build' /usr/bin/gmake -f libparmetis/CMakeFiles/parmetis.dir/build.make libparmetis/CMakeFiles/parmetis.dir/depend gmake[2]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.parmetis/petsc-build' cd /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.parmetis/petsc-build && /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/cmake-3.15.2-xit2o3iepxvqbyku77lwcugufilztu7t/bin/cmake -E cmake_depends "Unix Makefiles" /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.parmetis /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.parmetis/libparmetis /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.parmetis/petsc-build /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.parmetis/petsc-build/libparmetis /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.parmetis/petsc-build/libparmetis/CMakeFiles/parmetis.dir/DependInfo.cmake --color= Scanning dependencies of target parmetis gmake[2]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.parmetis/petsc-build' /usr/bin/gmake -f libparmetis/CMakeFiles/parmetis.dir/build.make libparmetis/CMakeFiles/parmetis.dir/build gmake[2]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.parmetis/petsc-build' [ 12%] Building C object libparmetis/CMakeFiles/parmetis.dir/balancemylink.c.o [ 12%] Building C object libparmetis/CMakeFiles/parmetis.dir/akwayfm.c.o cd /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.parmetis/petsc-build/libparmetis && /autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/bin/mpicc -Dparmetis_EXPORTS -I/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.parmetis/include 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`/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.parmetis/petsc-build' gmake[1]: Nothing to be done for `preinstall'. gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.parmetis/petsc-build' Install the project... /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/cmake-3.15.2-xit2o3iepxvqbyku77lwcugufilztu7t/bin/cmake -P cmake_install.cmake -- Install configuration: "" -- Installing: /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/include/parmetis.h -- Installing: /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/lib/libparmetis.so -- Set runtime path of "/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/lib/libparmetis.so" to "/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/lib" ********Output of running make on PARMETIS follows ******* -- The C compiler 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-I/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/include -I/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.parmetis/libparmetis/. -g -fast -fPIC -o CMakeFiles/parmetis.dir/wspace.c.o -c /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.parmetis/libparmetis/wspace.c cd /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.parmetis/petsc-build/libparmetis && /autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/bin/mpicc -Dparmetis_EXPORTS -I/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.parmetis/include -I/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.parmetis/headers -I/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/include -I/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.parmetis/libparmetis/. -g -fast -fPIC -o CMakeFiles/parmetis.dir/xyzpart.c.o -c /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.parmetis/libparmetis/xyzpart.c [100%] Linking C shared library libparmetis.so cd /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.parmetis/petsc-build/libparmetis && /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/cmake-3.15.2-xit2o3iepxvqbyku77lwcugufilztu7t/bin/cmake -E cmake_link_script CMakeFiles/parmetis.dir/link.txt --verbose=1 /autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/bin/mpicc -fPIC -g -fast -shared -Wl,-soname,libparmetis.so -o libparmetis.so CMakeFiles/parmetis.dir/ComputeVertexSeparator.c.o CMakeFiles/parmetis.dir/akwayfm.c.o CMakeFiles/parmetis.dir/ametis.c.o CMakeFiles/parmetis.dir/balancemylink.c.o CMakeFiles/parmetis.dir/comm.c.o CMakeFiles/parmetis.dir/csrmatch.c.o CMakeFiles/parmetis.dir/ctrl.c.o CMakeFiles/parmetis.dir/debug.c.o CMakeFiles/parmetis.dir/diffutil.c.o CMakeFiles/parmetis.dir/frename.c.o CMakeFiles/parmetis.dir/gkmetis.c.o CMakeFiles/parmetis.dir/gkmpi.c.o CMakeFiles/parmetis.dir/graph.c.o CMakeFiles/parmetis.dir/initbalance.c.o CMakeFiles/parmetis.dir/initmsection.c.o CMakeFiles/parmetis.dir/initpart.c.o CMakeFiles/parmetis.dir/kmetis.c.o CMakeFiles/parmetis.dir/kwayrefine.c.o CMakeFiles/parmetis.dir/match.c.o CMakeFiles/parmetis.dir/mdiffusion.c.o CMakeFiles/parmetis.dir/mesh.c.o CMakeFiles/parmetis.dir/mmetis.c.o CMakeFiles/parmetis.dir/move.c.o CMakeFiles/parmetis.dir/msetup.c.o CMakeFiles/parmetis.dir/node_refine.c.o CMakeFiles/parmetis.dir/ometis.c.o CMakeFiles/parmetis.dir/pspases.c.o CMakeFiles/parmetis.dir/redomylink.c.o CMakeFiles/parmetis.dir/remap.c.o CMakeFiles/parmetis.dir/renumber.c.o CMakeFiles/parmetis.dir/rmetis.c.o CMakeFiles/parmetis.dir/selectq.c.o CMakeFiles/parmetis.dir/serial.c.o CMakeFiles/parmetis.dir/stat.c.o CMakeFiles/parmetis.dir/timer.c.o CMakeFiles/parmetis.dir/util.c.o CMakeFiles/parmetis.dir/wave.c.o CMakeFiles/parmetis.dir/weird.c.o CMakeFiles/parmetis.dir/wspace.c.o CMakeFiles/parmetis.dir/xyzpart.c.o -L/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/lib -Wl,-rpath,/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/lib: -lmetis gmake[2]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.parmetis/petsc-build' [100%] Built target parmetis gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.parmetis/petsc-build' /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/cmake-3.15.2-xit2o3iepxvqbyku77lwcugufilztu7t/bin/cmake -E cmake_progress_start /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.parmetis/petsc-build/CMakeFiles 0/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/cmake-3.15.2-xit2o3iepxvqbyku77lwcugufilztu7t/bin/cmake -S/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.parmetis -B/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.parmetis/petsc-build --check-build-system CMakeFiles/Makefile.cmake 0 /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/cmake-3.15.2-xit2o3iepxvqbyku77lwcugufilztu7t/bin/cmake -E cmake_progress_start /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.parmetis/petsc-build/CMakeFiles /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.parmetis/petsc-build/CMakeFiles/progress.marks /usr/bin/gmake -f CMakeFiles/Makefile2 all gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.parmetis/petsc-build' /usr/bin/gmake -f libparmetis/CMakeFiles/parmetis.dir/build.make libparmetis/CMakeFiles/parmetis.dir/depend gmake[2]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.parmetis/petsc-build' cd /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.parmetis/petsc-build && /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/cmake-3.15.2-xit2o3iepxvqbyku77lwcugufilztu7t/bin/cmake -E cmake_depends "Unix Makefiles" /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.parmetis /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.parmetis/libparmetis /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.parmetis/petsc-build /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.parmetis/petsc-build/libparmetis /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.parmetis/petsc-build/libparmetis/CMakeFiles/parmetis.dir/DependInfo.cmake --color= gmake[2]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.parmetis/petsc-build' /usr/bin/gmake -f libparmetis/CMakeFiles/parmetis.dir/build.make libparmetis/CMakeFiles/parmetis.dir/build gmake[2]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.parmetis/petsc-build' gmake[2]: Nothing to be done for `libparmetis/CMakeFiles/parmetis.dir/build'. gmake[2]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.parmetis/petsc-build' [100%] Built target parmetis gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.parmetis/petsc-build' /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/cmake-3.15.2-xit2o3iepxvqbyku77lwcugufilztu7t/bin/cmake -E cmake_progress_start /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.parmetis/petsc-build/CMakeFiles 0 /usr/bin/gmake -f CMakeFiles/Makefile2 preinstall gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.parmetis/petsc-build' gmake[1]: Nothing to be done for `preinstall'. gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.parmetis/petsc-build' Install the project... /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/cmake-3.15.2-xit2o3iepxvqbyku77lwcugufilztu7t/bin/cmake -P cmake_install.cmake -- Install configuration: "" -- Installing: /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/include/parmetis.h -- Installing: /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/lib/libparmetis.so -- Set runtime path of "/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/lib/libparmetis.so" to "/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/lib"********End of Output of running make on PARMETIS ******* Checking for library in Download PARMETIS: ['/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/lib/libparmetis.a'] Contents: ['include', 'lib', 'bin', 'externalpackages', 'share'] ================================================================================ TEST check from config.libraries(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/libraries.py:157) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:157) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [ParMETIS_V3_PartKway] in library ['/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/lib/libparmetis.a'] ['/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/lib/libmetis.a'] Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.libraries/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.packages.metis -I/tmp/petsc-zrcSd3/config.libraries -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char ParMETIS_V3_PartKway(); static void _check_ParMETIS_V3_PartKway() { ParMETIS_V3_PartKway(); } int main() { _check_ParMETIS_V3_PartKway();; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.libraries/conftest -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.o -Wl,-rpath,/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/lib -L/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/lib -lparmetis -Wl,-rpath,/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/lib -L/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/lib -lmetis -lstdc++ -ldl Defined "HAVE_LIBPARMETIS" to "1" Checking for optional headers [] in Download PARMETIS: ['/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/include'] ================================================================================ TEST checkInclude from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files [] in ['/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/include'] Found header files [] in ['/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/include'] Checking for headers ['parmetis.h'] in Download PARMETIS: ['/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/include'] ================================================================================ TEST checkInclude from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['parmetis.h'] in ['/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/include'] Checking include with compiler flags var CPPFLAGS ['/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/include', '/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/include'] Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.packages.cuda -I/tmp/petsc-zrcSd3/config.packages.metis -I/tmp/petsc-zrcSd3/config.headers -I/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/include -I/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/include /tmp/petsc-zrcSd3/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Found header files ['parmetis.h'] in ['/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/include'] Checking for functions [ParMETIS_ComputeVertexSeparator] in library ['/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/lib/libparmetis.a'] ['/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/lib/libmetis.a'] Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.libraries/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.packages.metis -I/tmp/petsc-zrcSd3/config.libraries -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char ParMETIS_ComputeVertexSeparator(); static void _check_ParMETIS_ComputeVertexSeparator() { ParMETIS_ComputeVertexSeparator(); } int main() { _check_ParMETIS_ComputeVertexSeparator();; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.libraries/conftest -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.o -Wl,-rpath,/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/lib -L/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/lib -lparmetis -Wl,-rpath,/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/lib -L/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/lib -lmetis -lstdc++ -ldl Defined "HAVE_LIBPARMETIS" to "1" ================================================================================ TEST checkVersion from config.packages.parmetis(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:986) TESTING: checkVersion from config.packages.parmetis(config/BuildSystem/config/package.py:986) Uses self.version, self.minversion, self.maxversion, self.versionname, and self.versioninclude to determine if package has required version All intermediate test results are stored in /tmp/petsc-zrcSd3/config.packages.parmetis Preprocessing source: #include "confdefs.h" #include "conffix.h" #include "parmetis.h" ;petscpkgver(PARMETIS_MAJOR_VERSION.PARMETIS_MINOR_VERSION.PARMETIS_SUBMINOR_VERSION); Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.packages.cuda -I/tmp/petsc-zrcSd3/config.packages.metis -I/tmp/petsc-zrcSd3/config.packages.parmetis -I/tmp/petsc-zrcSd3/config.headers -I/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/include /tmp/petsc-zrcSd3/config.packages.parmetis/conftest.c For parmetis need <= 4.0.3 <= ================================================================================ TEST checkSharedLibrary from config.packages.parmetis(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:920) TESTING: checkSharedLibrary from config.packages.parmetis(config/BuildSystem/config/package.py:920) By default we don't care about checking if the library is shared child config.packages.parmetis 10.825800 ================================================================================ TEST alternateConfigureLibrary from config.packages.Chaco(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.Chaco(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.Chaco 0.000863 ================================================================================ TEST alternateConfigureLibrary from config.packages.hdf5(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.hdf5(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.hdf5 0.000747 ================================================================================ TEST alternateConfigureLibrary from config.packages.med(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.med(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.med 0.000749 ================================================================================ TEST alternateConfigureLibrary from config.packages.cgns(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.cgns(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.cgns 0.000650 ================================================================================ TEST alternateConfigureLibrary from config.packages.ascem-io(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.ascem-io(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.ascem-io 0.000733 ================================================================================ TEST alternateConfigureLibrary from config.packages.pflotran(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.pflotran(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.pflotran 0.000735 ================================================================================ TEST alternateConfigureLibrary from config.packages.alquimia(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.alquimia(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.alquimia 0.000729 ================================================================================ TEST alternateConfigureLibrary from config.packages.SAMRAI(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.SAMRAI(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.SAMRAI 0.000739 ================================================================================ TEST alternateConfigureLibrary from config.packages.ADIOS2(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.ADIOS2(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.ADIOS2 0.000732 child config.packages.flibs 0.000011 ================================================================================ TEST alternateConfigureLibrary from config.packages.pnetcdf(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.pnetcdf(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.pnetcdf 0.000733 ================================================================================ TEST alternateConfigureLibrary from config.packages.netcdf(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.netcdf(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.netcdf 0.000734 ================================================================================ TEST alternateConfigureLibrary from config.packages.exodusii(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.exodusii(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.exodusii 0.000731 ================================================================================ TEST alternateConfigureLibrary from config.packages.hwloc(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.hwloc(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.hwloc 0.000738 ================================================================================ TEST checkDependencies from config.packages.pthread(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:837) TESTING: checkDependencies from config.packages.pthread(config/BuildSystem/config/package.py:837) ================================================================================ TEST configureLibrary from config.packages.pthread(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/packages/pthread.py:20) TESTING: configureLibrary from config.packages.pthread(config/BuildSystem/config/packages/pthread.py:20) Checks for pthread_barrier_t, cpu_set_t, and sys/sysctl.h ================================================================================== Checking for a functional pthread Checking for library in Compiler specific search PTHREAD: [] ================================================================================ TEST check from config.libraries(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/libraries.py:157) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:157) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [pthread_create] in library [] [] Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.libraries/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.packages.metis -I/tmp/petsc-zrcSd3/config.libraries -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char pthread_create(); static void _check_pthread_create() { pthread_create(); } int main() { _check_pthread_create();; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.libraries/conftest -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.o -lstdc++ -ldl Checking for optional headers [] in Compiler specific search PTHREAD: [] ================================================================================ TEST checkInclude from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files [] in [] Found header files [] in [] Checking for headers ['pthread.h'] in Compiler specific search PTHREAD: [] ================================================================================ TEST checkInclude from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['pthread.h'] in [] Checking include with compiler flags var CPPFLAGS [] Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.packages.cuda -I/tmp/petsc-zrcSd3/config.packages.metis -I/tmp/petsc-zrcSd3/config.packages.parmetis -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Found header files ['pthread.h'] in [] All intermediate test results are stored in /tmp/petsc-zrcSd3/config.packages.pthread Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.packages.pthread/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.packages.metis -I/tmp/petsc-zrcSd3/config.packages.pthread -I/tmp/petsc-zrcSd3/config.libraries -g -fast /tmp/petsc-zrcSd3/config.packages.pthread/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { pthread_barrier_t *a; ; return 0; } Defined "HAVE_PTHREAD_BARRIER_T" to "1" Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.packages.pthread/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.packages.metis -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.packages.pthread -g -fast /tmp/petsc-zrcSd3/config.packages.pthread/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { cpu_set_t *a; ; return 0; } Defined "HAVE_SCHED_CPU_SET_T" to "1" Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.packages.cuda -I/tmp/petsc-zrcSd3/config.packages.metis -I/tmp/petsc-zrcSd3/config.packages.parmetis -I/tmp/petsc-zrcSd3/config.packages.pthread -I/tmp/petsc-zrcSd3/config.headers /tmp/petsc-zrcSd3/config.packages.pthread/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SYS_SYSCTL_H" to "1" ================================================================================ TEST checkVersion from config.packages.pthread(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:986) TESTING: checkVersion from config.packages.pthread(config/BuildSystem/config/package.py:986) Uses self.version, self.minversion, self.maxversion, self.versionname, and self.versioninclude to determine if package has required version ================================================================================ TEST checkSharedLibrary from config.packages.pthread(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:920) TESTING: checkSharedLibrary from config.packages.pthread(config/BuildSystem/config/package.py:920) By default we don't care about checking if the library is shared child config.packages.pthread 1.424829 ================================================================================ TEST alternateConfigureLibrary from config.packages.PTScotch(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.PTScotch(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.PTScotch 0.000890 ================================================================================ TEST alternateConfigureLibrary from config.packages.Zoltan(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.Zoltan(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.Zoltan 0.000764 ================================================================================ TEST alternateConfigureLibrary from config.packages.ADIOS(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.ADIOS(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.ADIOS 0.000747 ================================================================================ TEST alternateConfigureLibrary from config.packages.openmp(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.openmp(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.openmp 0.000653 ================================================================================ TEST alternateConfigureLibrary from config.packages.viennacl(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.viennacl(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.viennacl 0.000738 ================================================================================ TEST alternateConfigureLibrary from config.packages.ColPack(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.ColPack(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.ColPack 0.000742 ================================================================================ TEST alternateConfigureLibrary from config.packages.openblas(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.openblas(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.openblas 0.000734 ================================================================================ TEST alternateConfigureLibrary from config.packages.fblaslapack(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.fblaslapack(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.fblaslapack 0.000707 ================================================================================ TEST alternateConfigureLibrary from config.packages.f2cblaslapack(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.f2cblaslapack(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.f2cblaslapack 0.000694 ================================================================================ TEST checkDependencies from config.packages.BlasLapack(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:837) TESTING: checkDependencies from config.packages.BlasLapack(config/BuildSystem/config/package.py:837) ================================================================================ TEST configureLibrary from config.packages.BlasLapack(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/packages/BlasLapack.py:455) TESTING: configureLibrary from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:455) ================================================================================ Checking for BLAS and LAPACK in Default compiler libraries ================================================================================ TEST checkLib from config.packages.BlasLapack(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/packages/BlasLapack.py:120) TESTING: checkLib from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:120) Checking for BLAS and LAPACK symbols Checking for Fortran name mangling underscore on BLAS/LAPACK Checking for functions [ddot_] in library [''] ['/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib/pgi.ld', '-Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib', '-L/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib', '-Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib', '-L/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib', '-Wl,-rpath,/usr/lib/gcc/ppc64le-redhat-linux/4.8.5', '-L/usr/lib/gcc/ppc64le-redhat-linux/4.8.5', '-lstdc++', '-ldl', '-lpthread', '-lmpiprofilesupport', '-lmpi_ibm_usempi', '-lmpi_ibm_mpifh', '-lmpi_ibm', '-Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib', '-lpgf90rtl', '-lpgf90', '-lpgf90_rpm1', '-lpgf902', '-lpgftnrtl', '-latomic', '-lpgkomp', '-lomp', '-lomptarget', '-lpgmath', '-lpgc', '-lrt', '-lmass_simdp9', '-lmassvp9', '-lmassp9', '-lm', '-lgcc_s'] Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.libraries/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.packages.metis -I/tmp/petsc-zrcSd3/config.packages.pthread -I/tmp/petsc-zrcSd3/config.libraries -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char ddot_(); static void _check_ddot_() { ddot_(); } int main() { _check_ddot_();; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.libraries/conftest -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.o /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib/pgi.ld -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib -L/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -L/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -Wl,-rpath,/usr/lib/gcc/ppc64le-redhat-linux/4.8.5 -L/usr/lib/gcc/ppc64le-redhat-linux/4.8.5 -lstdc++ -ldl -lpthread -lmpiprofilesupport -lmpi_ibm_usempi -lmpi_ibm_mpifh -lmpi_ibm -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -lpgf90rtl -lpgf90 -lpgf90_rpm1 -lpgf902 -lpgftnrtl -latomic -lpgkomp -lomp -lomptarget -lpgmath -lpgc -lrt -lmass_simdp9 -lmassvp9 -lmassp9 -lm -lgcc_s -lstdc++ -ldl Possible ERROR while running linker: exit code 2 stderr: /tmp/petsc-zrcSd3/config.libraries/conftest.o: In function `main': /tmp/petsc-zrcSd3/config.libraries/conftest.c:10: undefined reference to `ddot_' /usr/bin/ld: link errors found, deleting executable `/tmp/petsc-zrcSd3/config.libraries/conftest' Checking for no name mangling on BLAS/LAPACK Checking for functions [ddot] in library [''] ['/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib/pgi.ld', '-Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib', '-L/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib', '-Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib', '-L/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib', '-Wl,-rpath,/usr/lib/gcc/ppc64le-redhat-linux/4.8.5', '-L/usr/lib/gcc/ppc64le-redhat-linux/4.8.5', '-lstdc++', '-ldl', '-lpthread', '-lmpiprofilesupport', '-lmpi_ibm_usempi', '-lmpi_ibm_mpifh', '-lmpi_ibm', '-Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib', '-lpgf90rtl', '-lpgf90', '-lpgf90_rpm1', '-lpgf902', '-lpgftnrtl', '-latomic', '-lpgkomp', '-lomp', '-lomptarget', '-lpgmath', '-lpgc', '-lrt', '-lmass_simdp9', '-lmassvp9', '-lmassp9', '-lm', '-lgcc_s'] Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.libraries/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.packages.metis -I/tmp/petsc-zrcSd3/config.packages.pthread -I/tmp/petsc-zrcSd3/config.libraries -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char ddot(); static void _check_ddot() { ddot(); } int main() { _check_ddot();; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.libraries/conftest -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.o /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib/pgi.ld -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib -L/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -L/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -Wl,-rpath,/usr/lib/gcc/ppc64le-redhat-linux/4.8.5 -L/usr/lib/gcc/ppc64le-redhat-linux/4.8.5 -lstdc++ -ldl -lpthread -lmpiprofilesupport -lmpi_ibm_usempi -lmpi_ibm_mpifh -lmpi_ibm -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -lpgf90rtl -lpgf90 -lpgf90_rpm1 -lpgf902 -lpgftnrtl -latomic -lpgkomp -lomp -lomptarget -lpgmath -lpgc -lrt -lmass_simdp9 -lmassvp9 -lmassp9 -lm -lgcc_s -lstdc++ -ldl Possible ERROR while running linker: exit code 2 stderr: /tmp/petsc-zrcSd3/config.libraries/conftest.o: In function `main': /tmp/petsc-zrcSd3/config.libraries/conftest.c:10: undefined reference to `ddot' /usr/bin/ld: link errors found, deleting executable `/tmp/petsc-zrcSd3/config.libraries/conftest' Unknown name mangling in BLAS/LAPACK ================================================================================ Checking for BLAS and LAPACK in Default BLIS ================================================================================ TEST checkLib from config.packages.BlasLapack(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/packages/BlasLapack.py:120) TESTING: checkLib from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:120) Checking for BLAS and LAPACK symbols Checking for Fortran name mangling underscore on BLAS/LAPACK Checking for functions [ddot_] in library ['libblis.a'] ['/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib/pgi.ld', '-Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib', '-L/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib', '-Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib', '-L/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib', '-Wl,-rpath,/usr/lib/gcc/ppc64le-redhat-linux/4.8.5', '-L/usr/lib/gcc/ppc64le-redhat-linux/4.8.5', '-lstdc++', '-ldl', '-lpthread', '-lmpiprofilesupport', '-lmpi_ibm_usempi', '-lmpi_ibm_mpifh', '-lmpi_ibm', '-Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib', '-lpgf90rtl', '-lpgf90', '-lpgf90_rpm1', '-lpgf902', '-lpgftnrtl', '-latomic', '-lpgkomp', '-lomp', '-lomptarget', '-lpgmath', '-lpgc', '-lrt', '-lmass_simdp9', '-lmassvp9', '-lmassp9', '-lm', '-lgcc_s'] Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.libraries/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.packages.metis -I/tmp/petsc-zrcSd3/config.packages.pthread -I/tmp/petsc-zrcSd3/config.libraries -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char ddot_(); static void _check_ddot_() { ddot_(); } int main() { _check_ddot_();; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.libraries/conftest -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.o -lblis /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib/pgi.ld -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib -L/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -L/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -Wl,-rpath,/usr/lib/gcc/ppc64le-redhat-linux/4.8.5 -L/usr/lib/gcc/ppc64le-redhat-linux/4.8.5 -lstdc++ -ldl -lpthread -lmpiprofilesupport -lmpi_ibm_usempi -lmpi_ibm_mpifh -lmpi_ibm -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -lpgf90rtl -lpgf90 -lpgf90_rpm1 -lpgf902 -lpgftnrtl -latomic -lpgkomp -lomp -lomptarget -lpgmath -lpgc -lrt -lmass_simdp9 -lmassvp9 -lmassp9 -lm -lgcc_s -lstdc++ -ldl Possible ERROR while running linker: exit code 2 stderr: /usr/bin/ld: cannot find -lblis Checking for no name mangling on BLAS/LAPACK Checking for functions [ddot] in library ['libblis.a'] ['/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib/pgi.ld', '-Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib', '-L/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib', '-Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib', '-L/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib', '-Wl,-rpath,/usr/lib/gcc/ppc64le-redhat-linux/4.8.5', '-L/usr/lib/gcc/ppc64le-redhat-linux/4.8.5', '-lstdc++', '-ldl', '-lpthread', '-lmpiprofilesupport', '-lmpi_ibm_usempi', '-lmpi_ibm_mpifh', '-lmpi_ibm', '-Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib', '-lpgf90rtl', '-lpgf90', '-lpgf90_rpm1', '-lpgf902', '-lpgftnrtl', '-latomic', '-lpgkomp', '-lomp', '-lomptarget', '-lpgmath', '-lpgc', '-lrt', '-lmass_simdp9', '-lmassvp9', '-lmassp9', '-lm', '-lgcc_s'] Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.libraries/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.packages.metis -I/tmp/petsc-zrcSd3/config.packages.pthread -I/tmp/petsc-zrcSd3/config.libraries -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char ddot(); static void _check_ddot() { ddot(); } int main() { _check_ddot();; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.libraries/conftest -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.o -lblis /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib/pgi.ld -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib -L/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -L/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -Wl,-rpath,/usr/lib/gcc/ppc64le-redhat-linux/4.8.5 -L/usr/lib/gcc/ppc64le-redhat-linux/4.8.5 -lstdc++ -ldl -lpthread -lmpiprofilesupport -lmpi_ibm_usempi -lmpi_ibm_mpifh -lmpi_ibm -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -lpgf90rtl -lpgf90 -lpgf90_rpm1 -lpgf902 -lpgftnrtl -latomic -lpgkomp -lomp -lomptarget -lpgmath -lpgc -lrt -lmass_simdp9 -lmassvp9 -lmassp9 -lm -lgcc_s -lstdc++ -ldl Possible ERROR while running linker: exit code 2 stderr: /usr/bin/ld: cannot find -lblis Unknown name mangling in BLAS/LAPACK ================================================================================ Checking for BLAS and LAPACK in Default compiler locations ================================================================================ TEST checkLib from config.packages.BlasLapack(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/packages/BlasLapack.py:120) TESTING: checkLib from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:120) Checking for BLAS and LAPACK symbols Checking for Fortran name mangling underscore on BLAS/LAPACK Checking for functions [ddot_] in library ['libblas.a'] ['/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib/pgi.ld', '-Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib', '-L/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib', '-Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib', '-L/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib', '-Wl,-rpath,/usr/lib/gcc/ppc64le-redhat-linux/4.8.5', '-L/usr/lib/gcc/ppc64le-redhat-linux/4.8.5', '-lstdc++', '-ldl', '-lpthread', '-lmpiprofilesupport', '-lmpi_ibm_usempi', '-lmpi_ibm_mpifh', '-lmpi_ibm', '-Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib', '-lpgf90rtl', '-lpgf90', '-lpgf90_rpm1', '-lpgf902', '-lpgftnrtl', '-latomic', '-lpgkomp', '-lomp', '-lomptarget', '-lpgmath', '-lpgc', '-lrt', '-lmass_simdp9', '-lmassvp9', '-lmassp9', '-lm', '-lgcc_s'] Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.libraries/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.packages.metis -I/tmp/petsc-zrcSd3/config.packages.pthread -I/tmp/petsc-zrcSd3/config.libraries -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char ddot_(); static void _check_ddot_() { ddot_(); } int main() { _check_ddot_();; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.libraries/conftest -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.o -lblas /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib/pgi.ld -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib -L/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -L/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -Wl,-rpath,/usr/lib/gcc/ppc64le-redhat-linux/4.8.5 -L/usr/lib/gcc/ppc64le-redhat-linux/4.8.5 -lstdc++ -ldl -lpthread -lmpiprofilesupport -lmpi_ibm_usempi -lmpi_ibm_mpifh -lmpi_ibm -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -lpgf90rtl -lpgf90 -lpgf90_rpm1 -lpgf902 -lpgftnrtl -latomic -lpgkomp -lomp -lomptarget -lpgmath -lpgc -lrt -lmass_simdp9 -lmassvp9 -lmassp9 -lm -lgcc_s -lstdc++ -ldl Defined "HAVE_LIBBLAS" to "1" Checking for functions [dgetrs_] in library ['liblapack.a'] ['libblas.a', '/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib/pgi.ld', '-Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib', '-L/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib', '-Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib', '-L/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib', '-Wl,-rpath,/usr/lib/gcc/ppc64le-redhat-linux/4.8.5', '-L/usr/lib/gcc/ppc64le-redhat-linux/4.8.5', '-lstdc++', '-ldl', '-lpthread', '-lmpiprofilesupport', '-lmpi_ibm_usempi', '-lmpi_ibm_mpifh', '-lmpi_ibm', '-Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib', '-lpgf90rtl', '-lpgf90', '-lpgf90_rpm1', '-lpgf902', '-lpgftnrtl', '-latomic', '-lpgkomp', '-lomp', '-lomptarget', '-lpgmath', '-lpgc', '-lrt', '-lmass_simdp9', '-lmassvp9', '-lmassp9', '-lm', '-lgcc_s'] Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.libraries/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.packages.metis -I/tmp/petsc-zrcSd3/config.packages.pthread -I/tmp/petsc-zrcSd3/config.libraries -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dgetrs_(); static void _check_dgetrs_() { dgetrs_(); } int main() { _check_dgetrs_();; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.libraries/conftest -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.o -llapack -lblas /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib/pgi.ld -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib -L/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -L/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -Wl,-rpath,/usr/lib/gcc/ppc64le-redhat-linux/4.8.5 -L/usr/lib/gcc/ppc64le-redhat-linux/4.8.5 -lstdc++ -ldl -lpthread -lmpiprofilesupport -lmpi_ibm_usempi -lmpi_ibm_mpifh -lmpi_ibm -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -lpgf90rtl -lpgf90 -lpgf90_rpm1 -lpgf902 -lpgftnrtl -latomic -lpgkomp -lomp -lomptarget -lpgmath -lpgc -lrt -lmass_simdp9 -lmassvp9 -lmassp9 -lm -lgcc_s -lstdc++ -ldl Defined "HAVE_LIBLAPACK" to "1" Found Fortran mangling on BLAS/LAPACK which is underscore Defined "BLASLAPACK_UNDERSCORE" to "1" ================================================================================ TEST checkMKL from config.packages.BlasLapack(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/packages/BlasLapack.py:528) TESTING: checkMKL from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:528) Check for Intel MKL library Checking for functions [mkl_set_num_threads] in library ['liblapack.a', 'libblas.a', '/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib/pgi.ld', '-Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib', '-L/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib', '-Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib', '-L/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib', '-Wl,-rpath,/usr/lib/gcc/ppc64le-redhat-linux/4.8.5', '-L/usr/lib/gcc/ppc64le-redhat-linux/4.8.5', '-lstdc++', '-ldl', '-lpthread', '-lmpiprofilesupport', '-lmpi_ibm_usempi', '-lmpi_ibm_mpifh', '-lmpi_ibm', '-Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib', '-lpgf90rtl', '-lpgf90', '-lpgf90_rpm1', '-lpgf902', '-lpgftnrtl', '-latomic', '-lpgkomp', '-lomp', '-lomptarget', '-lpgmath', '-lpgc', '-lrt', '-lmass_simdp9', '-lmassvp9', '-lmassp9', '-lm', '-lgcc_s'] [] Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.libraries/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.packages.metis -I/tmp/petsc-zrcSd3/config.packages.pthread -I/tmp/petsc-zrcSd3/config.libraries -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char mkl_set_num_threads(); static void _check_mkl_set_num_threads() { mkl_set_num_threads(); } int main() { _check_mkl_set_num_threads();; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.libraries/conftest -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.o -llapack -lblas /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib/pgi.ld -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib -L/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -L/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -Wl,-rpath,/usr/lib/gcc/ppc64le-redhat-linux/4.8.5 -L/usr/lib/gcc/ppc64le-redhat-linux/4.8.5 -lstdc++ -ldl -lpthread -lmpiprofilesupport -lmpi_ibm_usempi -lmpi_ibm_mpifh -lmpi_ibm -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -lpgf90rtl -lpgf90 -lpgf90_rpm1 -lpgf902 -lpgftnrtl -latomic -lpgkomp -lomp -lomptarget -lpgmath -lpgc -lrt -lmass_simdp9 -lmassvp9 -lmassp9 -lm -lgcc_s -lstdc++ -ldl Possible ERROR while running linker: exit code 2 stderr: /tmp/petsc-zrcSd3/config.libraries/conftest.o: In function `main': /tmp/petsc-zrcSd3/config.libraries/conftest.c:10: undefined reference to `mkl_set_num_threads' /usr/bin/ld: link errors found, deleting executable `/tmp/petsc-zrcSd3/config.libraries/conftest' ================================================================================ TEST checkESSL from config.packages.BlasLapack(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/packages/BlasLapack.py:566) TESTING: checkESSL from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:566) Check for the IBM ESSL library Checking for functions [iessl] in library ['liblapack.a', 'libblas.a', '/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib/pgi.ld', '-Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib', '-L/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib', '-Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib', '-L/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib', '-Wl,-rpath,/usr/lib/gcc/ppc64le-redhat-linux/4.8.5', '-L/usr/lib/gcc/ppc64le-redhat-linux/4.8.5', '-lstdc++', '-ldl', '-lpthread', '-lmpiprofilesupport', '-lmpi_ibm_usempi', '-lmpi_ibm_mpifh', '-lmpi_ibm', '-Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib', '-lpgf90rtl', '-lpgf90', '-lpgf90_rpm1', '-lpgf902', '-lpgftnrtl', '-latomic', '-lpgkomp', '-lomp', '-lomptarget', '-lpgmath', '-lpgc', '-lrt', '-lmass_simdp9', '-lmassvp9', '-lmassp9', '-lm', '-lgcc_s'] [] Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.libraries/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.packages.metis -I/tmp/petsc-zrcSd3/config.packages.pthread -I/tmp/petsc-zrcSd3/config.libraries -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char iessl(); static void _check_iessl() { iessl(); } int main() { _check_iessl();; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.libraries/conftest -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.o -llapack -lblas /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib/pgi.ld -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib -L/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -L/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -Wl,-rpath,/usr/lib/gcc/ppc64le-redhat-linux/4.8.5 -L/usr/lib/gcc/ppc64le-redhat-linux/4.8.5 -lstdc++ -ldl -lpthread -lmpiprofilesupport -lmpi_ibm_usempi -lmpi_ibm_mpifh -lmpi_ibm -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -lpgf90rtl -lpgf90 -lpgf90_rpm1 -lpgf902 -lpgftnrtl -latomic -lpgkomp -lomp -lomptarget -lpgmath -lpgc -lrt -lmass_simdp9 -lmassvp9 -lmassp9 -lm -lgcc_s -lstdc++ -ldl Possible ERROR while running linker: exit code 2 stderr: /tmp/petsc-zrcSd3/config.libraries/conftest.o: In function `main': /tmp/petsc-zrcSd3/config.libraries/conftest.c:10: undefined reference to `iessl' /usr/bin/ld: link errors found, deleting executable `/tmp/petsc-zrcSd3/config.libraries/conftest' ================================================================================ TEST checkPESSL from config.packages.BlasLapack(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/packages/BlasLapack.py:574) TESTING: checkPESSL from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:574) Check for the IBM PESSL library - and error out - if used instead of ESSL Checking for functions [ipessl] in library ['liblapack.a', 'libblas.a', '/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib/pgi.ld', '-Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib', '-L/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib', '-Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib', '-L/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib', '-Wl,-rpath,/usr/lib/gcc/ppc64le-redhat-linux/4.8.5', '-L/usr/lib/gcc/ppc64le-redhat-linux/4.8.5', '-lstdc++', '-ldl', '-lpthread', '-lmpiprofilesupport', '-lmpi_ibm_usempi', '-lmpi_ibm_mpifh', '-lmpi_ibm', '-Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib', '-lpgf90rtl', '-lpgf90', '-lpgf90_rpm1', '-lpgf902', '-lpgftnrtl', '-latomic', '-lpgkomp', '-lomp', '-lomptarget', '-lpgmath', '-lpgc', '-lrt', '-lmass_simdp9', '-lmassvp9', '-lmassp9', '-lm', '-lgcc_s'] [] Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.libraries/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.packages.metis -I/tmp/petsc-zrcSd3/config.packages.pthread -I/tmp/petsc-zrcSd3/config.libraries -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char ipessl(); static void _check_ipessl() { ipessl(); } int main() { _check_ipessl();; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.libraries/conftest -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.o -llapack -lblas /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib/pgi.ld -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib -L/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -L/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -Wl,-rpath,/usr/lib/gcc/ppc64le-redhat-linux/4.8.5 -L/usr/lib/gcc/ppc64le-redhat-linux/4.8.5 -lstdc++ -ldl -lpthread -lmpiprofilesupport -lmpi_ibm_usempi -lmpi_ibm_mpifh -lmpi_ibm -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -lpgf90rtl -lpgf90 -lpgf90_rpm1 -lpgf902 -lpgftnrtl -latomic -lpgkomp -lomp -lomptarget -lpgmath -lpgc -lrt -lmass_simdp9 -lmassvp9 -lmassp9 -lm -lgcc_s -lstdc++ -ldl Possible ERROR while running linker: exit code 2 stderr: /tmp/petsc-zrcSd3/config.libraries/conftest.o: In function `main': /tmp/petsc-zrcSd3/config.libraries/conftest.c:10: undefined reference to `ipessl' /usr/bin/ld: link errors found, deleting executable `/tmp/petsc-zrcSd3/config.libraries/conftest' ================================================================================ TEST checkMissing from config.packages.BlasLapack(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/packages/BlasLapack.py:599) TESTING: checkMissing from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:599) Check for missing LAPACK routines Checking for functions [dgels_ dgelss_ dgeqrf_ dgerfs_ dgesv_ dgesvd_ dgetrf_ dgetri_ dgges_ dhgeqz_ dhseqr_ dormqr_ dpotrf_ dpotri_ dpotrs_ dpttrf_ dpttrs_ dstebz_ dstein_ dsteqr_ dsyev_ dsyevx_ dsygvx_ dsytrf_ dsytri_ dsytrs_ dtgsen_ dtrsen_ dtrtrs_ dorgqr_] in library ['liblapack.a'] ['libblas.a', 'liblapack.a', 'libblas.a', '/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib/pgi.ld', '-Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib', '-L/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib', '-Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib', '-L/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib', '-Wl,-rpath,/usr/lib/gcc/ppc64le-redhat-linux/4.8.5', '-L/usr/lib/gcc/ppc64le-redhat-linux/4.8.5', '-lstdc++', '-ldl', '-lpthread', '-lmpiprofilesupport', '-lmpi_ibm_usempi', '-lmpi_ibm_mpifh', '-lmpi_ibm', '-Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib', '-lpgf90rtl', '-lpgf90', '-lpgf90_rpm1', '-lpgf902', '-lpgftnrtl', '-latomic', '-lpgkomp', '-lomp', '-lomptarget', '-lpgmath', '-lpgc', '-lrt', '-lmass_simdp9', '-lmassvp9', '-lmassp9', '-lm', '-lgcc_s'] Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.libraries/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.packages.metis -I/tmp/petsc-zrcSd3/config.packages.pthread -I/tmp/petsc-zrcSd3/config.libraries -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dgels_(); static void _check_dgels_() { dgels_(); } char dgelss_(); static void _check_dgelss_() { dgelss_(); } char dgeqrf_(); static void _check_dgeqrf_() { dgeqrf_(); } char dgerfs_(); static void _check_dgerfs_() { dgerfs_(); } char dgesv_(); static void _check_dgesv_() { dgesv_(); } char dgesvd_(); static void _check_dgesvd_() { dgesvd_(); } char dgetrf_(); static void _check_dgetrf_() { dgetrf_(); } char dgetri_(); static void _check_dgetri_() { dgetri_(); } char dgges_(); static void _check_dgges_() { dgges_(); } char dhgeqz_(); static void _check_dhgeqz_() { dhgeqz_(); } char dhseqr_(); static void _check_dhseqr_() { dhseqr_(); } char dormqr_(); static void _check_dormqr_() { dormqr_(); } char dpotrf_(); static void _check_dpotrf_() { dpotrf_(); } char dpotri_(); static void _check_dpotri_() { dpotri_(); } char dpotrs_(); static void _check_dpotrs_() { dpotrs_(); } char dpttrf_(); static void _check_dpttrf_() { dpttrf_(); } char dpttrs_(); static void _check_dpttrs_() { dpttrs_(); } char dstebz_(); static void _check_dstebz_() { dstebz_(); } char dstein_(); static void _check_dstein_() { dstein_(); } char dsteqr_(); static void _check_dsteqr_() { dsteqr_(); } char dsyev_(); static void _check_dsyev_() { dsyev_(); } char dsyevx_(); static void _check_dsyevx_() { dsyevx_(); } char dsygvx_(); static void _check_dsygvx_() { dsygvx_(); } char dsytrf_(); static void _check_dsytrf_() { dsytrf_(); } char dsytri_(); static void _check_dsytri_() { dsytri_(); } char dsytrs_(); static void _check_dsytrs_() { dsytrs_(); } char dtgsen_(); static void _check_dtgsen_() { dtgsen_(); } char dtrsen_(); static void _check_dtrsen_() { dtrsen_(); } char dtrtrs_(); static void _check_dtrtrs_() { dtrtrs_(); } char dorgqr_(); static void _check_dorgqr_() { dorgqr_(); } int main() { _check_dgels_(); _check_dgelss_(); _check_dgeqrf_(); _check_dgerfs_(); _check_dgesv_(); _check_dgesvd_(); _check_dgetrf_(); _check_dgetri_(); _check_dgges_(); _check_dhgeqz_(); _check_dhseqr_(); _check_dormqr_(); _check_dpotrf_(); _check_dpotri_(); _check_dpotrs_(); _check_dpttrf_(); _check_dpttrs_(); _check_dstebz_(); _check_dstein_(); _check_dsteqr_(); _check_dsyev_(); _check_dsyevx_(); _check_dsygvx_(); _check_dsytrf_(); _check_dsytri_(); _check_dsytrs_(); _check_dtgsen_(); _check_dtrsen_(); _check_dtrtrs_(); _check_dorgqr_();; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.libraries/conftest -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.o -llapack -lblas -llapack -lblas /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib/pgi.ld -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib -L/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -L/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -Wl,-rpath,/usr/lib/gcc/ppc64le-redhat-linux/4.8.5 -L/usr/lib/gcc/ppc64le-redhat-linux/4.8.5 -lstdc++ -ldl -lpthread -lmpiprofilesupport -lmpi_ibm_usempi -lmpi_ibm_mpifh -lmpi_ibm -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -lpgf90rtl -lpgf90 -lpgf90_rpm1 -lpgf902 -lpgftnrtl -latomic -lpgkomp -lomp -lomptarget -lpgmath -lpgc -lrt -lmass_simdp9 -lmassvp9 -lmassp9 -lm -lgcc_s -lstdc++ -ldl Defined "HAVE_LIBLAPACK" to "1" ================================================================================ TEST checklsame from config.packages.BlasLapack(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/packages/BlasLapack.py:617) TESTING: checklsame from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:617) Do the BLAS/LAPACK libraries have a valid lsame() function with correct binding. Checking for functions [lsame_] in library ['liblapack.a', 'libblas.a', '/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib/pgi.ld', '-Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib', '-L/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib', '-Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib', '-L/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib', '-Wl,-rpath,/usr/lib/gcc/ppc64le-redhat-linux/4.8.5', '-L/usr/lib/gcc/ppc64le-redhat-linux/4.8.5', '-lstdc++', '-ldl', '-lpthread', '-lmpiprofilesupport', '-lmpi_ibm_usempi', '-lmpi_ibm_mpifh', '-lmpi_ibm', '-Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib', '-lpgf90rtl', '-lpgf90', '-lpgf90_rpm1', '-lpgf902', '-lpgftnrtl', '-latomic', '-lpgkomp', '-lomp', '-lomptarget', '-lpgmath', '-lpgc', '-lrt', '-lmass_simdp9', '-lmassvp9', '-lmassp9', '-lm', '-lgcc_s'] [] Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.libraries/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.packages.metis -I/tmp/petsc-zrcSd3/config.packages.pthread -I/tmp/petsc-zrcSd3/config.libraries -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char lsame_(); static void _check_lsame_() { lsame_(); } int main() { _check_lsame_();; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.libraries/conftest -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.o -llapack -lblas /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib/pgi.ld -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib -L/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -L/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -Wl,-rpath,/usr/lib/gcc/ppc64le-redhat-linux/4.8.5 -L/usr/lib/gcc/ppc64le-redhat-linux/4.8.5 -lstdc++ -ldl -lpthread -lmpiprofilesupport -lmpi_ibm_usempi -lmpi_ibm_mpifh -lmpi_ibm -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -lpgf90rtl -lpgf90 -lpgf90_rpm1 -lpgf902 -lpgftnrtl -latomic -lpgkomp -lomp -lomptarget -lpgmath -lpgc -lrt -lmass_simdp9 -lmassvp9 -lmassp9 -lm -lgcc_s -lstdc++ -ldl Defined "HAVE_LIBLAPACK" to "1" Defined "HAVE_LIBBLAS" to "1" Defined "HAVE_LIB_AUTOFS_NCCS_SVM1_SW_SUMMIT__SWCI_0_CORE_OPT_SPACK_20180914_LINUX_RHEL7_PPC64LE_GCC_4_8_5_PGI_19_9_6RLH73DTF3LMBM6V7R3FKH7TNBEQ53HC_LINUXPOWER_19_9_LIB_PGI_LD" to "1" Defined "HAVE_LIBSTDC__" to "1" Defined "HAVE_LIBDL" to "1" Defined "HAVE_LIBPTHREAD" to "1" Defined "HAVE_LIBMPIPROFILESUPPORT" to "1" Defined "HAVE_LIBMPI_IBM_USEMPI" to "1" Defined "HAVE_LIBMPI_IBM_MPIFH" to "1" Defined "HAVE_LIBMPI_IBM" to "1" Defined "HAVE_LIBPGF90RTL" to "1" Defined "HAVE_LIBPGF90" to "1" Defined "HAVE_LIBPGF90_RPM1" to "1" Defined "HAVE_LIBPGF902" to "1" Defined "HAVE_LIBPGFTNRTL" to "1" Defined "HAVE_LIBATOMIC" to "1" Defined "HAVE_LIBPGKOMP" to "1" Defined "HAVE_LIBOMP" to "1" Defined "HAVE_LIBOMPTARGET" to "1" Defined "HAVE_LIBPGMATH" to "1" Defined "HAVE_LIBPGC" to "1" Defined "HAVE_LIBRT" to "1" Defined "HAVE_LIBMASS_SIMDP9" to "1" Defined "HAVE_LIBMASSVP9" to "1" Defined "HAVE_LIBMASSP9" to "1" Defined "HAVE_LIBM" to "1" Defined "HAVE_LIBGCC_S" to "1" Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.packages.metis -I/tmp/petsc-zrcSd3/config.packages.pthread -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.setCompilers -g -fast /tmp/petsc-zrcSd3/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" char *dgeev_(void); char* testroutine(void){return dgeev_(); }Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.setCompilers/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.packages.metis -I/tmp/petsc-zrcSd3/config.packages.pthread -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.setCompilers -g -fast /tmp/petsc-zrcSd3/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" char *dgeev_(void); char* testroutine(void){return dgeev_(); }Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.setCompilers/libconftest.so -shared -g -fast /tmp/petsc-zrcSd3/config.setCompilers/conftest.o /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib/pgi.ld -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib -L/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -L/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -Wl,-rpath,/usr/lib/gcc/ppc64le-redhat-linux/4.8.5 -L/usr/lib/gcc/ppc64le-redhat-linux/4.8.5 -llapack -lblas -llapack -lblas -lstdc++ -ldl -lpthread -lmpiprofilesupport -lmpi_ibm_usempi -lmpi_ibm_mpifh -lmpi_ibm -lpgf90rtl -lpgf90 -lpgf90_rpm1 -lpgf902 -lpgftnrtl -latomic -lpgkomp -lomp -lomptarget -lpgmath -lpgc -lrt -lmass_simdp9 -lmassvp9 -lmassp9 -lm -lgcc_s -lstdc++ -ldl ================================================================================ TEST checkRuntimeIssues from config.packages.BlasLapack(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/packages/BlasLapack.py:676) TESTING: checkRuntimeIssues from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:676) Determines if BLAS/LAPACK routines use 32 or 64 bit integers All intermediate test results are stored in /tmp/petsc-zrcSd3/config.packages.BlasLapack Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.packages.BlasLapack/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.packages.metis -I/tmp/petsc-zrcSd3/config.packages.BlasLapack -I/tmp/petsc-zrcSd3/config.packages.pthread -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/config.setCompilers -g -fast /tmp/petsc-zrcSd3/config.packages.BlasLapack/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #include #include int main() { FILE *output = fopen("runtimetestoutput","w"); extern double ddot_(const int*,const double*,const int *,const double*,const int*); double x1mkl[4] = {3.0,5.0,7.0,9.0}; int one1mkl = 1,nmkl = 2; double dotresultmkl = 0; dotresultmkl = ddot_(&nmkl,x1mkl,&one1mkl,x1mkl,&one1mkl); fprintf(output, "-known-64-bit-blas-indices=%d",dotresultmkl != 34);; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.packages.BlasLapack/conftest -g -fast /tmp/petsc-zrcSd3/config.packages.BlasLapack/conftest.o -llapack -lblas /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib/pgi.ld -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib -L/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -L/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -Wl,-rpath,/usr/lib/gcc/ppc64le-redhat-linux/4.8.5 -L/usr/lib/gcc/ppc64le-redhat-linux/4.8.5 -lstdc++ -ldl -lpthread -lmpiprofilesupport -lmpi_ibm_usempi -lmpi_ibm_mpifh -lmpi_ibm -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -lpgf90rtl -lpgf90 -lpgf90_rpm1 -lpgf902 -lpgftnrtl -latomic -lpgkomp -lomp -lomptarget -lpgmath -lpgc -lrt -lmass_simdp9 -lmassvp9 -lmassp9 -lm -lgcc_s -lstdc++ -ldl Testing executable /tmp/petsc-zrcSd3/config.packages.BlasLapack/conftest to see if it can be run Executing: /tmp/petsc-zrcSd3/config.packages.BlasLapack/conftest Running Executable with threads to time it out at 60 Executing: /tmp/petsc-zrcSd3/config.packages.BlasLapack/conftest Checking for 64 bit blas indices: result 0 ================================================================================ TEST checkVersion from config.packages.BlasLapack(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:986) TESTING: checkVersion from config.packages.BlasLapack(config/BuildSystem/config/package.py:986) Uses self.version, self.minversion, self.maxversion, self.versionname, and self.versioninclude to determine if package has required version ================================================================================ TEST checkSharedLibrary from config.packages.BlasLapack(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:920) TESTING: checkSharedLibrary from config.packages.BlasLapack(config/BuildSystem/config/package.py:920) By default we don't care about checking if the library is shared child config.packages.BlasLapack 13.268037 ================================================================================ TEST alternateConfigureLibrary from config.packages.sundials(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.sundials(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.sundials 0.000802 ================================================================================ TEST alternateConfigureLibrary from config.packages.spai(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.spai(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.spai 0.000824 ================================================================================ TEST alternateConfigureLibrary from config.packages.pARMS(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.pARMS(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.pARMS 0.000747 ================================================================================ TEST alternateConfigureLibrary from config.packages.p4est(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.p4est(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.p4est 0.000747 ================================================================================ TEST alternateConfigureLibrary from config.packages.mkl_sparse_optimize(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.mkl_sparse_optimize(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.mkl_sparse_optimize 0.000724 ================================================================================ TEST alternateConfigureLibrary from config.packages.mkl_sparse(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.mkl_sparse(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.mkl_sparse 0.000717 ================================================================================ TEST alternateConfigureLibrary from config.packages.mkl_cpardiso(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.mkl_cpardiso(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.mkl_cpardiso 0.000715 ================================================================================ TEST alternateConfigureLibrary from config.packages.hpddm(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/packages/hpddm.py:120) TESTING: alternateConfigureLibrary from config.packages.hpddm(config/BuildSystem/config/packages/hpddm.py:120) Defined make rule "hpddm-build" with dependencies "" and code [] Defined make rule "hpddm-install" with dependencies "" and code [] child config.packages.hpddm 0.001882 ================================================================================ TEST alternateConfigureLibrary from config.packages.fftw(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.fftw(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.fftw 0.000755 ================================================================================ TEST alternateConfigureLibrary from config.packages.elemental(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.elemental(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.elemental 0.000743 ================================================================================ TEST alternateConfigureLibrary from config.packages.ml(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.ml(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.ml 0.000825 ================================================================================ TEST alternateConfigureLibrary from config.packages.mkl_pardiso(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.mkl_pardiso(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.mkl_pardiso 0.000715 ================================================================================ TEST alternateConfigureLibrary from config.packages.SuperLU_DIST(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.SuperLU_DIST(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.SuperLU_DIST 0.000743 ================================================================================ TEST alternateConfigureLibrary from config.packages.SuperLU(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.SuperLU(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.SuperLU 0.000735 ================================================================================ TEST alternateConfigureLibrary from config.packages.SuiteSparse(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.SuiteSparse(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.SuiteSparse 0.000808 ================================================================================ TEST alternateConfigureLibrary from config.packages.PaStiX(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.PaStiX(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.PaStiX 0.000738 ================================================================================ TEST alternateConfigureLibrary from config.packages.scalapack(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.scalapack(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.scalapack 0.000740 ================================================================================ TEST alternateConfigureLibrary from config.packages.strumpack(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.strumpack(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.strumpack 0.000803 ================================================================================ TEST alternateConfigureLibrary from config.packages.MUMPS(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.MUMPS(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.MUMPS 0.000931 ================================================================================ TEST alternateConfigureLibrary from config.packages.MOAB(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.MOAB(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.MOAB 0.000739 Checking for functions [dgels_] in library ['liblapack.a', 'libblas.a', '/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib/pgi.ld', '-Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib', '-L/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib', '-Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib', '-L/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib', '-Wl,-rpath,/usr/lib/gcc/ppc64le-redhat-linux/4.8.5', '-L/usr/lib/gcc/ppc64le-redhat-linux/4.8.5', '-lstdc++', '-ldl', '-lpthread', '-lmpiprofilesupport', '-lmpi_ibm_usempi', '-lmpi_ibm_mpifh', '-lmpi_ibm', '-Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib', '-lpgf90rtl', '-lpgf90', '-lpgf90_rpm1', '-lpgf902', '-lpgftnrtl', '-latomic', '-lpgkomp', '-lomp', '-lomptarget', '-lpgmath', '-lpgc', '-lrt', '-lmass_simdp9', '-lmassvp9', '-lmassp9', '-lm', '-lgcc_s'] [] Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.libraries/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.packages.metis -I/tmp/petsc-zrcSd3/config.packages.BlasLapack -I/tmp/petsc-zrcSd3/config.packages.pthread -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.libraries -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dgels_(); static void _check_dgels_() { dgels_(); } int main() { _check_dgels_();; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.libraries/conftest -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.o -llapack -lblas /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib/pgi.ld -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib -L/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -L/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -Wl,-rpath,/usr/lib/gcc/ppc64le-redhat-linux/4.8.5 -L/usr/lib/gcc/ppc64le-redhat-linux/4.8.5 -lstdc++ -ldl -lpthread -lmpiprofilesupport -lmpi_ibm_usempi -lmpi_ibm_mpifh -lmpi_ibm -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -lpgf90rtl -lpgf90 -lpgf90_rpm1 -lpgf902 -lpgftnrtl -latomic -lpgkomp -lomp -lomptarget -lpgmath -lpgc -lrt -lmass_simdp9 -lmassvp9 -lmassp9 -lm -lgcc_s -lstdc++ -ldl Defined "HAVE_LIBLAPACK" to "1" Defined "HAVE_LIBBLAS" to "1" Defined "HAVE_LIB_AUTOFS_NCCS_SVM1_SW_SUMMIT__SWCI_0_CORE_OPT_SPACK_20180914_LINUX_RHEL7_PPC64LE_GCC_4_8_5_PGI_19_9_6RLH73DTF3LMBM6V7R3FKH7TNBEQ53HC_LINUXPOWER_19_9_LIB_PGI_LD" to "1" Defined "HAVE_LIBSTDC__" to "1" Defined "HAVE_LIBDL" to "1" Defined "HAVE_LIBPTHREAD" to "1" Defined "HAVE_LIBMPIPROFILESUPPORT" to "1" Defined "HAVE_LIBMPI_IBM_USEMPI" to "1" Defined "HAVE_LIBMPI_IBM_MPIFH" to "1" Defined "HAVE_LIBMPI_IBM" to "1" Defined "HAVE_LIBPGF90RTL" to "1" Defined "HAVE_LIBPGF90" to "1" Defined "HAVE_LIBPGF90_RPM1" to "1" Defined "HAVE_LIBPGF902" to "1" Defined "HAVE_LIBPGFTNRTL" to "1" Defined "HAVE_LIBATOMIC" to "1" Defined "HAVE_LIBPGKOMP" to "1" Defined "HAVE_LIBOMP" to "1" Defined "HAVE_LIBOMPTARGET" to "1" Defined "HAVE_LIBPGMATH" to "1" Defined "HAVE_LIBPGC" to "1" Defined "HAVE_LIBRT" to "1" Defined "HAVE_LIBMASS_SIMDP9" to "1" Defined "HAVE_LIBMASSVP9" to "1" Defined "HAVE_LIBMASSP9" to "1" Defined "HAVE_LIBM" to "1" Defined "HAVE_LIBGCC_S" to "1" Found dgels() in Lapack library as needed by hypre ================================================================================ TEST checkDependencies from config.packages.hypre(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:837) TESTING: checkDependencies from config.packages.hypre(config/BuildSystem/config/package.py:837) ================================================================================ TEST configureLibrary from config.packages.hypre(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/packages/hypre.py:143) TESTING: configureLibrary from config.packages.hypre(config/BuildSystem/config/packages/hypre.py:143) ================================================================================== Checking for a functional hypre ************************************************************************************************** Please register to use hypre at https://computation.llnl.gov/casc/linear_solvers/sls_hypre.html ************************************************************************************************** Looking for HYPRE at git.hypre, hg.hypre or a directory starting with ['hypre'] Could not locate an existing copy of HYPRE: ['git.sowing', 'git.metis', 'git.parmetis'] Downloading hypre =============================================================================== Trying to download git://https://github.com/hypre-space/hypre for HYPRE =============================================================================== Running Executable WITHOUT threads to time it out Executing: git clone https://github.com/hypre-space/hypre /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre stdout: Cloning into '/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre'... Looking for HYPRE at git.hypre, hg.hypre or a directory starting with ['hypre'] Found a copy of HYPRE in git.hypre Running Executable WITHOUT threads to time it out Executing: ['git', 'rev-parse', '--git-dir'] stdout: .git Running Executable WITHOUT threads to time it out Executing: ['git', 'cat-file', '-e', '93baaa8c9^{commit}'] Running Executable WITHOUT threads to time it out Executing: ['git', 'rev-parse', '93baaa8c9'] stdout: 93baaa8c9e46ae9133b06fa0ebaf46c332aad54f Running Executable WITHOUT threads to time it out Executing: ['git', '-c', 'user.name=petsc-configure', '-c', 'user.email=petsc@configure', 'stash'] stdout: No local changes to save Running Executable WITHOUT threads to time it out Executing: ['git', 'clean', '-f', '-d', '-x'] Running Executable WITHOUT threads to time it out Executing: ['git', 'checkout', '-f', '93baaa8c9e46ae9133b06fa0ebaf46c332aad54f'] All intermediate test results are stored in /tmp/petsc-zrcSd3/config.packages.hypre Running Executable WITHOUT threads to time it out Executing: mpif90 -v Removing configure arguments ['AR="/usr/bin/ar"', 'ARFLAGS="cr"'] Removing configure arguments [] HYPRE was just downloaded, forcing a rebuild because cannot determine if package has changed =============================================================================== Running configure on HYPRE; this may take several minutes =============================================================================== Running Executable WITHOUT threads to time it out Executing: ./configure --prefix=/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda MAKE=/usr/bin/gmake --libdir=/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/lib CC="mpicc" CFLAGS="-g -fast" CXX="mpiCC" CXXFLAGS="-g -fast -std=c++11" F90="mpif90" F90FLAGS="-g -fast" FFLAGS="-g -fast" FC="mpif90" F77="mpif90" FCFLAGS="-g -fast" --enable-shared --with-MPI-lib-dirs="" --with-MPI-libs="" --with-blas-lib="-llapack -lblas /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib/pgi.ld -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib -L/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -L/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -Wl,-rpath,/usr/lib/gcc/ppc64le-redhat-linux/4.8.5 -L/usr/lib/gcc/ppc64le-redhat-linux/4.8.5 -lstdc++ -ldl -lpthread -lmpiprofilesupport -lmpi_ibm_usempi -lmpi_ibm_mpifh -lmpi_ibm -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -lpgf90rtl -lpgf90 -lpgf90_rpm1 -lpgf902 -lpgftnrtl -latomic -lpgkomp -lomp -lomptarget -lpgmath -lpgc -lrt -lmass_simdp9 -lmassvp9 -lmassp9 -lm -lgcc_s" --with-lapack-lib=" " --with-blas=no --with-lapack=no --with-fmangle-blas=one-underscore --with-fmangle-lapack=one-underscore --without-mli --without-fei --without-superlu --enable-bigint AR="/usr/bin/ar cr" LDFLAGS="" HYPRE_CUDA_SM=70 stdout: checking build system type... powerpc64-unknown-linux-gnu checking host system type... powerpc64-unknown-linux-gnu checking whether /usr/bin/gmake sets $(MAKE)... yes checking for ranlib... ranlib checking for gcc... mpicc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... no checking whether mpicc accepts -g... yes checking for mpicc option to accept ISO C89... none needed checking whether we are using the GNU C++ compiler... yes checking whether mpiCC accepts -g... yes checking whether we are using the GNU Fortran compiler... no checking whether mpif90 accepts -g... yes checking how to get verbose linking output from mpif90... -v checking for Fortran libraries of mpif90... -L/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib -L/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -L/usr/lib64 -L/usr/lib/gcc/ppc64le-redhat-linux/4.8.5 -lpthread -lmpiprofilesupport -lmpi_ibm_usempi -lmpi_ibm_mpifh -lmpi_ibm -L/usr/lib/gcc/ppc64le-redhat-linux/4.8.5/../../../../lib64 -lpgf90rtl -lpgf90 -lpgf90_rpm1 -lpgf902 -lpgftnrtl -latomic -lpgkomp -lomp -lomptarget -ldl -lpgmath -lpgc -lrt -lmass_simdp9 -lmassvp9 -lmassp9 -lm checking for dummy main to link with Fortran libraries... none checking for Fortran name-mangling scheme... lower case, underscore, no extra underscore checking for MPI_Init... yes checking for mpi.h... yes checking for MPI_Comm_f2c... yes checking how to run the C preprocessor... mpicc -E checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking whether MPI_Comm_f2c is a macro... no checking for cabs in -lm... yes checking the hostname... batch5 checking the architecture... LINUX configure: creating ./config.status config.status: creating config/Makefile.config config.status: creating HYPRE_config.h =============================================================================== Running make on HYPRE; this may take several minutes =============================================================================== Running Executable WITHOUT threads to time it out Executing: /usr/bin/gmake clean stdout: Cleaning blas ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/blas' rm -rf *.o gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/blas' Cleaning lapack ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/lapack' rm -rf *.o gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/lapack' Cleaning utilities ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/utilities' rm -f *.o libHYPRE* rm -rf pchdir tca.map *inslog* gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/utilities' Cleaning multivector ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/multivector' rm -f *.o libHYPRE* rm -rf pchdir tca.map *inslog* gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/multivector' Cleaning krylov ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/krylov' rm -f *.o libHYPRE* rm -rf pchdir tca.map *inslog* gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/krylov' Cleaning seq_mv ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/seq_mv' rm -f *.o libHYPRE* rm -rf pchdir tca.map *inslog* gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/seq_mv' Cleaning parcsr_mv ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/parcsr_mv' rm -f *.o libHYPRE* rm -f driver driver_matvec driver_matmul rm -rf pchdir tca.map *inslog* gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/parcsr_mv' Cleaning parcsr_block_mv ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/parcsr_block_mv' rm -rf *.o libHYPRE_* rm -f driver driver_matvec driver_matmul gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/parcsr_block_mv' Cleaning distributed_matrix ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/distributed_matrix' rm -f *.o libHYPRE* rm -rf pchdir tca.map *inslog* gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/distributed_matrix' Cleaning IJ_mv ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/IJ_mv' rm -f *.o libHYPRE* rm -rf pchdir tca.map *inslog* gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/IJ_mv' Cleaning matrix_matrix ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/matrix_matrix' rm -f *.o lib* rm -rf pchdir tca.map *inslog* gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/matrix_matrix' Cleaning parcsr_ls ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/parcsr_ls' rm -f *.o libHYPRE* rm -rf pchdir tca.map *inslog* gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/parcsr_ls' Cleaning struct_mv ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/struct_mv' rm -f *.o libHYPRE* rm -rf pchdir tca.map *inslog* gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/struct_mv' Cleaning struct_ls ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/struct_ls' rm -f *.o libHYPRE* rm -rf pchdir tca.map *inslog* gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/struct_ls' Cleaning sstruct_mv ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/sstruct_mv' rm -f *.o libHYPRE* rm -rf pchdir tca.map *inslog* gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/sstruct_mv' Cleaning sstruct_ls ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/sstruct_ls' rm -f *.o libHYPRE* rm -rf pchdir tca.map *inslog* gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/sstruct_ls' Cleaning /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/distributed_ls ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/distributed_ls' gmake[2]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/distributed_ls/pilut' rm -f *.o libHYPRE* rm -rf pchdir tca.map *inslog* gmake[2]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/distributed_ls/pilut' gmake[2]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/distributed_ls/ParaSails' rm -f *.o libHYPRE* rm -rf pchdir tca.map *inslog* gmake[2]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/distributed_ls/ParaSails' gmake[2]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/distributed_ls/Euclid' rm -f *.o libHYPRE* rm -rf pchdir tca.map *inslog* gmake[2]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/distributed_ls/Euclid' gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/distributed_ls' Cleaning lib ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/lib' rm -f *.o libHYPRE* rm -rf pchdir tca.map *inslog* gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/lib' Cleaning docs ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/docs' make[2]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/docs/usr-manual' rm -rf _build/* make[2]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/docs/usr-manual' make[2]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/docs/ref-manual' make[2]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/docs/ref-manual' gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/docs' Cleaning test ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/test' rm -f *.o rm -rf pchdir tca.map *inslog* gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/test' Cleaning examples ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/examples' rm -f ex1.o ex2.o ex3.o ex4.o ex5.o ex5f.o ex6.o ex7.o ex8.o ex9.o ex11.o ex12.o ex12f.o ex13.o ex14.o ex15.o ex16.o rm -f ex5big.o ex15big.o rm -f ex5f.o ex12f.o rm -f ex17.o ex18.o rm -f ex18comp.o cd vis; make clean make[2]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/examples/vis' rm -f *mesh* *sol* *data* make[2]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/examples/vis' gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/examples' rm -rf tca.map pchdir *inslog* Running Executable WITHOUT threads to time it out Executing: /usr/bin/gmake -j59 -l166.4 stdout: Making blas ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/blas' mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../utilities -c dasum.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../utilities -c daxpy.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../utilities -c dcopy.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../utilities -c ddot.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../utilities -c dgemm.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../utilities -c dgemv.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../utilities -c dger.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../utilities -c dnrm2.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../utilities -c drot.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../utilities -c dscal.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../utilities -c dswap.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../utilities -c dsymm.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../utilities -c dsymv.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../utilities -c dsyr2.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../utilities -c dsyr2k.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../utilities -c dsyrk.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../utilities -c dtrmm.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../utilities -c dtrmv.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../utilities -c dtrsm.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../utilities -c dtrsv.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../utilities -c f2c.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../utilities -c idamax.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../utilities -c lsame.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../utilities -c xerbla.c gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/blas' Making lapack ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/lapack' mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dbdsqr.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dgebd2.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dgebrd.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dgelq2.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dgelqf.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dgels.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dgeqr2.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dgeqrf.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dgesvd.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dgetrf.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dgetri.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dgetrs.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dgetf2.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dlabad.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dlabrd.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dlacpy.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dlae2.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dlaev2.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dlange.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dlanst.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dlansy.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dlapy2.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dlarfb.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dlarf.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dlarfg.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dlarft.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dlartg.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dlas2.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dlascl.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dlaset.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dlasq1.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dlasq2.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dlasq3.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dlasq4.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dlasq5.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dlasq6.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dlasr.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dlasrt.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dlassq.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dlaswp.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dlasv2.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dlatrd.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dorg2l.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dorg2r.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dorgbr.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dorgl2.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dorglq.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dorgql.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dorgqr.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dorgtr.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dorm2r.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dormbr.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dorml2.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dormlq.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dormqr.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dpotf2.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dpotrf.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dpotrs.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dsteqr.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dsterf.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dsyev.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dsygs2.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dsygst.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dsygv.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dsytd2.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dsytrd.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dtrtri.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dtrti2.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c ieeeck.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c ilaenv.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c lsame.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c xerbla.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dlamch.c gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/lapack' Making utilities ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/utilities' mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I. -c F90_HYPRE_error.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I. -c HYPRE_version.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I. -c amg_linklist.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I. -c binsearch.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I. -c exchange_data.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I. -c fortran_matrix.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I. -c hypre_ap.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I. -c hypre_complex.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I. -c hypre_cuda_utils.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I. -c hypre_error.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I. -c hypre_general.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I. -c hypre_hopscotch_hash.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I. -c hypre_memory.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I. -c hypre_merge_sort.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I. -c hypre_mpi_comm_f2c.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I. -c hypre_omp_device.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I. -c hypre_prefix_sum.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I. -c hypre_printf.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I. -c hypre_qsort.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I. -c mpistubs.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I. -c qsplit.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I. -c random.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I. -c threading.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I. -c timer.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I. -c timing.c Building libHYPRE_utilities.so ... mpicc -shared -o libHYPRE_utilities-2.18.2.so F90_HYPRE_error.o HYPRE_version.o amg_linklist.o binsearch.o exchange_data.o fortran_matrix.o hypre_ap.o hypre_complex.o hypre_cuda_utils.o hypre_error.o hypre_general.o hypre_hopscotch_hash.o hypre_memory.o hypre_merge_sort.o hypre_mpi_comm_f2c.o hypre_omp_device.o hypre_prefix_sum.o hypre_printf.o hypre_qsort.o mpistubs.o qsplit.o random.o threading.o timer.o timing.o -Wl,-soname,libHYPRE_utilities-2.18.2.so ln -s libHYPRE_utilities-2.18.2.so libHYPRE_utilities.so cp -fR ./HYPRE_*.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include cp -fR ./_hypre_utilities.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include cp -fR ./hypre_hopscotch_hash.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include cp -fR ./fortran*.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/utilities' Making multivector ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/multivector' mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I. -I./.. -I./../utilities -c multivector.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I. -I./.. -I./../utilities -c temp_multivector.c Building libHYPRE_multivector.so ... mpicc -shared -o libHYPRE_multivector-2.18.2.so multivector.o temp_multivector.o -Wl,-soname,libHYPRE_multivector-2.18.2.so ln -s libHYPRE_multivector-2.18.2.so libHYPRE_multivector.so cp -fR *.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/multivector' Making krylov ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/krylov' mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -c bicgstab.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -c cgnr.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -c gmres.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -c cogmres.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -c flexgmres.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -c lgmres.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -c HYPRE_bicgstab.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -c HYPRE_cgnr.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -c HYPRE_gmres.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -c HYPRE_cogmres.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -c HYPRE_lgmres.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -c HYPRE_flexgmres.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -c HYPRE_pcg.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -c pcg.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -c HYPRE_lobpcg.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -c lobpcg.c Building libHYPRE_krylov.so ... mpicc -shared -o libHYPRE_krylov-2.18.2.so bicgstab.o cgnr.o gmres.o cogmres.o flexgmres.o lgmres.o HYPRE_bicgstab.o HYPRE_cgnr.o HYPRE_gmres.o HYPRE_cogmres.o HYPRE_lgmres.o HYPRE_flexgmres.o HYPRE_pcg.o pcg.o HYPRE_lobpcg.o lobpcg.o -Wl,-soname,libHYPRE_krylov-2.18.2.so ln -s libHYPRE_krylov-2.18.2.so libHYPRE_krylov.so cp -fR ./HYPRE_*.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include cp -fR ./krylov.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include cp -fR ./lobpcg.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/krylov' Making seq_mv ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/seq_mv' mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c csr_matop.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c csr_matop_device.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c csr_matrix.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c csr_matvec.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c csr_matvec_oomp.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c csr_spadd_device.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c csr_spgemm_device.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c csr_spgemm_device_attempt.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c csr_spgemm_device_confident.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c csr_spgemm_device_cusparse.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c csr_spgemm_device_rowbound.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c csr_spgemm_device_rowest.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c csr_spgemm_device_util.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c csr_sptrans_device.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c genpart.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c HYPRE_csr_matrix.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c HYPRE_mapped_matrix.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c HYPRE_multiblock_matrix.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c HYPRE_vector.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c mapped_matrix.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c multiblock_matrix.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c vector.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c vector_batched.c Building libHYPRE_seq_mv.so ... mpicc -shared -o libHYPRE_seq_mv-2.18.2.so csr_matop.o csr_matop_device.o csr_matrix.o csr_matvec.o csr_matvec_oomp.o csr_spadd_device.o csr_spgemm_device.o csr_spgemm_device_attempt.o csr_spgemm_device_confident.o csr_spgemm_device_cusparse.o csr_spgemm_device_rowbound.o csr_spgemm_device_rowest.o csr_spgemm_device_util.o csr_sptrans_device.o genpart.o HYPRE_csr_matrix.o HYPRE_mapped_matrix.o HYPRE_multiblock_matrix.o HYPRE_vector.o mapped_matrix.o multiblock_matrix.o vector.o vector_batched.o -Wl,-soname,libHYPRE_seq_mv-2.18.2.so ln -s libHYPRE_seq_mv-2.18.2.so libHYPRE_seq_mv.so cp -fR ./HYPRE_*.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include cp -fR ./seq_mv.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/seq_mv' Making parcsr_mv ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/parcsr_mv' mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../blas -I./../lapack -I./../utilities -I./../seq_mv -c communicationT.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../blas -I./../lapack -I./../utilities -I./../seq_mv -c F90_HYPRE_parcsr_matrix.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../blas -I./../lapack -I./../utilities -I./../seq_mv -c F90_HYPRE_parcsr_vector.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../blas -I./../lapack -I./../utilities -I./../seq_mv -c F90_parcsr_matrix.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../blas -I./../lapack -I./../utilities -I./../seq_mv -c F90_par_vector.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../blas -I./../lapack -I./../utilities -I./../seq_mv -c HYPRE_parcsr_matrix.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../blas -I./../lapack -I./../utilities -I./../seq_mv -c HYPRE_parcsr_vector.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../blas -I./../lapack -I./../utilities -I./../seq_mv -c new_commpkg.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../blas -I./../lapack -I./../utilities -I./../seq_mv -c numbers.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../blas -I./../lapack -I./../utilities -I./../seq_mv -c par_csr_aat.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../blas -I./../lapack -I./../utilities -I./../seq_mv -c par_csr_assumed_part.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../blas -I./../lapack -I./../utilities -I./../seq_mv -c par_csr_bool_matop.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../blas -I./../lapack -I./../utilities -I./../seq_mv -c par_csr_bool_matrix.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../blas -I./../lapack -I./../utilities -I./../seq_mv -c par_csr_communication.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../blas -I./../lapack -I./../utilities -I./../seq_mv -c par_csr_matop.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../blas -I./../lapack -I./../utilities -I./../seq_mv -c par_csr_matop_device.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../blas -I./../lapack -I./../utilities -I./../seq_mv -c par_csr_matrix.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../blas -I./../lapack -I./../utilities -I./../seq_mv -c par_csr_matop_marked.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../blas -I./../lapack -I./../utilities -I./../seq_mv -c par_csr_matvec.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../blas -I./../lapack -I./../utilities -I./../seq_mv -c par_csr_triplemat.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../blas -I./../lapack -I./../utilities -I./../seq_mv -c par_csr_triplemat_device.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../blas -I./../lapack -I./../utilities -I./../seq_mv -c par_vector.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../blas -I./../lapack -I./../utilities -I./../seq_mv -c par_make_system.c Building libHYPRE_parcsr_mv.so ... mpicc -shared -o libHYPRE_parcsr_mv-2.18.2.so communicationT.o F90_HYPRE_parcsr_matrix.o F90_HYPRE_parcsr_vector.o F90_parcsr_matrix.o F90_par_vector.o HYPRE_parcsr_matrix.o HYPRE_parcsr_vector.o new_commpkg.o numbers.o par_csr_aat.o par_csr_assumed_part.o par_csr_bool_matop.o par_csr_bool_matrix.o par_csr_communication.o par_csr_matop.o par_csr_matop_device.o par_csr_matrix.o par_csr_matop_marked.o par_csr_matvec.o par_csr_triplemat.o par_csr_triplemat_device.o par_vector.o par_make_system.o -Wl,-soname,libHYPRE_parcsr_mv-2.18.2.so ln -s libHYPRE_parcsr_mv-2.18.2.so libHYPRE_parcsr_mv.so cp -fR ./HYPRE_*.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include cp -fR ./_hypre_parcsr_mv.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/parcsr_mv' Making parcsr_block_mv ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/parcsr_block_mv' mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../multivector -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -I./../IJ_mv -I./../krylov -c csr_block_matrix.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../multivector -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -I./../IJ_mv -I./../krylov -c csr_block_matvec.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../multivector -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -I./../IJ_mv -I./../krylov -c par_csr_block_matrix.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../multivector -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -I./../IJ_mv -I./../krylov -c par_csr_block_matvec.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../multivector -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -I./../IJ_mv -I./../krylov -c par_csr_block_comm.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../multivector -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -I./../IJ_mv -I./../krylov -c par_csr_block_rap.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../multivector -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -I./../IJ_mv -I./../krylov -c par_csr_block_rap_communication.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../multivector -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -I./../IJ_mv -I./../krylov -c par_csr_block_interp.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../multivector -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -I./../IJ_mv -I./../krylov -c par_csr_block_relax.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../multivector -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -I./../IJ_mv -I./../krylov -c par_block_nodal_systems.c Building libHYPRE_parcsr_block_mv.so ... mpicc -shared -o libHYPRE_parcsr_block_mv-2.18.2.so csr_block_matrix.o csr_block_matvec.o par_csr_block_matrix.o par_csr_block_matvec.o par_csr_block_comm.o par_csr_block_rap.o par_csr_block_rap_communication.o par_csr_block_interp.o par_csr_block_relax.o par_block_nodal_systems.o -Wl,-soname,libHYPRE_parcsr_block_mv-2.18.2.so ln -s libHYPRE_parcsr_block_mv-2.18.2.so libHYPRE_parcsr_block_mv.so cp -fR ./par_csr_block_matrix.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include cp -fR ./csr_block_matrix.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/parcsr_block_mv' Making distributed_matrix ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/distributed_matrix' mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../parcsr_mv -I./../seq_mv -c distributed_matrix.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../parcsr_mv -I./../seq_mv -c HYPRE_distributed_matrix.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../parcsr_mv -I./../seq_mv -c distributed_matrix_ISIS.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../parcsr_mv -I./../seq_mv -c distributed_matrix_PETSc.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../parcsr_mv -I./../seq_mv -c distributed_matrix_parcsr.c Building libHYPRE_DistributedMatrix.so ... mpicc -shared -o libHYPRE_DistributedMatrix-2.18.2.so distributed_matrix.o HYPRE_distributed_matrix.o distributed_matrix_ISIS.o distributed_matrix_PETSc.o distributed_matrix_parcsr.o -Wl,-soname,libHYPRE_DistributedMatrix-2.18.2.so ln -s libHYPRE_DistributedMatrix-2.18.2.so libHYPRE_DistributedMatrix.so cp -fR ./distributed_matrix.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/distributed_matrix' Making IJ_mv ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/IJ_mv' mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -c aux_parcsr_matrix.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -c aux_par_vector.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -c F90_HYPRE_IJMatrix.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -c F90_HYPRE_IJVector.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -c F90_IJMatrix.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -c HYPRE_IJMatrix.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -c HYPRE_IJVector.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -c IJ_assumed_part.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -c IJMatrix.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -c IJMatrix_parcsr.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -c IJVector.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -c IJVector_parcsr.c Building libHYPRE_IJ_mv.so ... mpicc -shared -o libHYPRE_IJ_mv-2.18.2.so aux_parcsr_matrix.o aux_par_vector.o F90_HYPRE_IJMatrix.o F90_HYPRE_IJVector.o F90_IJMatrix.o HYPRE_IJMatrix.o HYPRE_IJVector.o IJ_assumed_part.o IJMatrix.o IJMatrix_parcsr.o IJVector.o IJVector_parcsr.o -Wl,-soname,libHYPRE_IJ_mv-2.18.2.so ln -s libHYPRE_IJ_mv-2.18.2.so libHYPRE_IJ_mv.so cp -fR ./HYPRE_*.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include cp -fR ./_hypre_IJ_mv.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/IJ_mv' Making matrix_matrix ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/matrix_matrix' mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../distributed_matrix -I./../seq_mv -I./../parcsr_mv -c HYPRE_ConvertParCSRMatrixToDistributedMatrix.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../distributed_matrix -I./../seq_mv -I./../parcsr_mv -c HYPRE_ConvertPETScMatrixToDistributedMatrix.c Building libHYPRE_MatrixMatrix.so ... mpicc -shared -o libHYPRE_MatrixMatrix-2.18.2.so HYPRE_ConvertParCSRMatrixToDistributedMatrix.o HYPRE_ConvertPETScMatrixToDistributedMatrix.o -Wl,-soname,libHYPRE_MatrixMatrix-2.18.2.so ln -s libHYPRE_MatrixMatrix-2.18.2.so libHYPRE_MatrixMatrix.so cp -fR ./HYPRE_*.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/matrix_matrix' Making parcsr_ls ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/parcsr_ls' mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c amg_hybrid.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c aux_interp.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c F90_hypre_laplace.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c F90_HYPRE_parcsr_amg.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c F90_HYPRE_parcsr_bicgstab.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c F90_HYPRE_parcsr_block.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c F90_HYPRE_parcsr_cgnr.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c F90_HYPRE_parcsr_Euclid.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c F90_HYPRE_parcsr_gmres.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c F90_HYPRE_parcsr_cogmres.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c F90_HYPRE_parcsr_flexgmres.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c F90_HYPRE_parcsr_lgmres.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c F90_HYPRE_parcsr_hybrid.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c F90_HYPRE_parcsr_int.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c F90_HYPRE_parcsr_ParaSails.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c F90_HYPRE_parcsr_pcg.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c F90_HYPRE_parcsr_pilut.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c F90_HYPRE_parcsr_schwarz.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c F90_HYPRE_ams.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c gen_redcs_mat.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c HYPRE_parcsr_amg.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c HYPRE_parcsr_bicgstab.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c HYPRE_parcsr_block.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c HYPRE_parcsr_cgnr.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c HYPRE_parcsr_Euclid.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c HYPRE_parcsr_gmres.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c HYPRE_parcsr_cogmres.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c HYPRE_parcsr_flexgmres.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c HYPRE_parcsr_lgmres.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c HYPRE_parcsr_hybrid.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c HYPRE_parcsr_int.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c HYPRE_parcsr_mgr.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c HYPRE_parcsr_ParaSails.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c HYPRE_parcsr_pcg.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c HYPRE_parcsr_pilut.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c HYPRE_parcsr_schwarz.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c HYPRE_ams.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c HYPRE_ads.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c HYPRE_ame.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_amg.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_amg_setup.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_amg_solve.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_amg_solveT.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_cg_relax_wt.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_coarsen.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_coarsen_device.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_cgc_coarsen.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_cheby.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_coarse_parms.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_coordinates.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_cr.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_cycle.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_add_cycle.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_difconv.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_gauss_elim.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_gsmg.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_indepset.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_indepset_device.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_interp.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_interp_device.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_interp_trunc_device.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_jacobi_interp.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_multi_interp.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_laplace.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_laplace_27pt.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_laplace_9pt.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_lr_interp.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_mgr.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_mgr_setup.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_mgr_solve.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_nongalerkin.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_nodal_systems.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_rap.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_rap_communication.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_rotate_7pt.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_relax.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_relax_more.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_relax_interface.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_scaled_matnorm.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_schwarz.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_stats.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_strength.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_strength_device.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_sv_interp.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_sv_interp_ln.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_vardifconv.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_vardifconv_rs.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c partial.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c pcg_par.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c schwarz.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c block_tridiag.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c ams.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c ads.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c ame.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_restr.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_lr_restr.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c superlu.c Building libHYPRE_parcsr_ls.so ... mpicc -shared -o libHYPRE_parcsr_ls-2.18.2.so amg_hybrid.o aux_interp.o F90_hypre_laplace.o F90_HYPRE_parcsr_amg.o F90_HYPRE_parcsr_bicgstab.o F90_HYPRE_parcsr_block.o F90_HYPRE_parcsr_cgnr.o F90_HYPRE_parcsr_Euclid.o F90_HYPRE_parcsr_gmres.o F90_HYPRE_parcsr_cogmres.o F90_HYPRE_parcsr_flexgmres.o F90_HYPRE_parcsr_lgmres.o F90_HYPRE_parcsr_hybrid.o F90_HYPRE_parcsr_int.o F90_HYPRE_parcsr_ParaSails.o F90_HYPRE_parcsr_pcg.o F90_HYPRE_parcsr_pilut.o F90_HYPRE_parcsr_schwarz.o F90_HYPRE_ams.o gen_redcs_mat.o HYPRE_parcsr_amg.o HYPRE_parcsr_bicgstab.o HYPRE_parcsr_block.o HYPRE_parcsr_cgnr.o HYPRE_parcsr_Euclid.o HYPRE_parcsr_gmres.o HYPRE_parcsr_cogmres.o HYPRE_parcsr_flexgmres.o HYPRE_parcsr_lgmres.o HYPRE_parcsr_hybrid.o HYPRE_parcsr_int.o HYPRE_parcsr_mgr.o HYPRE_parcsr_ParaSails.o HYPRE_parcsr_pcg.o HYPRE_parcsr_pilut.o HYPRE_parcsr_schwarz.o HYPRE_ams.o HYPRE_ads.o HYPRE_ame.o par_amg.o par_amg_setup.o par_amg_solve.o par_amg_solveT.o par_cg_relax_wt.o par_coarsen.o par_coarsen_device.o par_cgc_coarsen.o par_cheby.o par_coarse_parms.o par_coordinates.o par_cr.o par_cycle.o par_add_cycle.o par_difconv.o par_gauss_elim.o par_gsmg.o par_indepset.o par_indepset_device.o par_interp.o par_interp_device.o par_interp_trunc_device.o par_jacobi_interp.o par_multi_interp.o par_laplace.o par_laplace_27pt.o par_laplace_9pt.o par_lr_interp.o par_mgr.o par_mgr_setup.o par_mgr_solve.o par_nongalerkin.o par_nodal_systems.o par_rap.o par_rap_communication.o par_rotate_7pt.o par_relax.o par_relax_more.o par_relax_interface.o par_scaled_matnorm.o par_schwarz.o par_stats.o par_strength.o par_strength_device.o par_sv_interp.o par_sv_interp_ln.o par_vardifconv.o par_vardifconv_rs.o partial.o pcg_par.o schwarz.o block_tridiag.o ams.o ads.o ame.o par_restr.o par_lr_restr.o superlu.o -Wl,-soname,libHYPRE_parcsr_ls-2.18.2.so ln -s libHYPRE_parcsr_ls-2.18.2.so libHYPRE_parcsr_ls.so cp -fR ./HYPRE_*.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include cp -fR ./_hypre_parcsr_ls.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/parcsr_ls' Making struct_mv ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/struct_mv' mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c assumed_part.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c box_algebra.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c box_boundary.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c box.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c box_manager.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c communication_info.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c computation.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c F90_HYPRE_struct_grid.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c F90_HYPRE_struct_matrix.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c F90_HYPRE_struct_stencil.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c F90_HYPRE_struct_vector.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c HYPRE_struct_grid.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c HYPRE_struct_matrix.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c HYPRE_struct_stencil.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c HYPRE_struct_vector.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c project.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c struct_axpy.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c struct_communication.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c struct_copy.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c struct_grid.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c struct_innerprod.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c struct_io.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c struct_matrix.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c struct_matrix_mask.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c struct_matvec.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c struct_scale.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c struct_stencil.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c struct_vector.c Building libHYPRE_struct_mv.so ... mpicc -shared -o libHYPRE_struct_mv-2.18.2.so assumed_part.o box_algebra.o box_boundary.o box.o box_manager.o communication_info.o computation.o F90_HYPRE_struct_grid.o F90_HYPRE_struct_matrix.o F90_HYPRE_struct_stencil.o F90_HYPRE_struct_vector.o HYPRE_struct_grid.o HYPRE_struct_matrix.o HYPRE_struct_stencil.o HYPRE_struct_vector.o project.o struct_axpy.o struct_communication.o struct_copy.o struct_grid.o struct_innerprod.o struct_io.o struct_matrix.o struct_matrix_mask.o struct_matvec.o struct_scale.o struct_stencil.o struct_vector.o -Wl,-soname,libHYPRE_struct_mv-2.18.2.so ln -s libHYPRE_struct_mv-2.18.2.so libHYPRE_struct_mv.so cp -fR ./HYPRE_*.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include cp -fR ./_hypre_struct_mv.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/struct_mv' Making struct_ls ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/struct_ls' mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c coarsen.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c cyclic_reduction.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c F90_HYPRE_struct_bicgstab.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c F90_HYPRE_struct_cycred.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c F90_HYPRE_struct_flexgmres.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c F90_HYPRE_struct_gmres.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c F90_HYPRE_struct_lgmres.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c F90_HYPRE_struct_hybrid.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c F90_HYPRE_struct_int.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c F90_HYPRE_struct_jacobi.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c F90_HYPRE_struct_pcg.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c F90_HYPRE_struct_pfmg.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c F90_HYPRE_struct_smg.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c F90_HYPRE_struct_sparse_msg.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c general.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c hybrid.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c HYPRE_struct_bicgstab.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c HYPRE_struct_cycred.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c HYPRE_struct_flexgmres.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c HYPRE_struct_gmres.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c HYPRE_struct_hybrid.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c HYPRE_struct_int.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c HYPRE_struct_jacobi.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c HYPRE_struct_lgmres.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c HYPRE_struct_pcg.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c HYPRE_struct_pfmg.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c HYPRE_struct_smg.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c HYPRE_struct_sparse_msg.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c jacobi.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c pcg_struct.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c pfmg2_setup_rap.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c pfmg3_setup_rap.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c pfmg.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c pfmg_relax.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c pfmg_setup.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c pfmg_setup_interp.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c pfmg_setup_rap5.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c pfmg_setup_rap7.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c pfmg_setup_rap.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c pfmg_solve.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c point_relax.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c red_black_constantcoef_gs.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c red_black_gs.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c semi.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c semi_interp.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c semi_restrict.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c semi_setup_rap.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c smg2_setup_rap.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c smg3_setup_rap.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c smg_axpy.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c smg.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c smg_relax.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c smg_residual.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c smg_setup.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c smg_setup_interp.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c smg_setup_rap.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c smg_setup_restrict.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c smg_solve.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c sparse_msg2_setup_rap.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c sparse_msg3_setup_rap.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c sparse_msg.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c sparse_msg_filter.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c sparse_msg_interp.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c sparse_msg_restrict.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c sparse_msg_setup.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c sparse_msg_setup_rap.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c sparse_msg_solve.c Building libHYPRE_struct_ls.so ... mpicc -shared -o libHYPRE_struct_ls-2.18.2.so coarsen.o cyclic_reduction.o F90_HYPRE_struct_bicgstab.o F90_HYPRE_struct_cycred.o F90_HYPRE_struct_flexgmres.o F90_HYPRE_struct_gmres.o F90_HYPRE_struct_lgmres.o F90_HYPRE_struct_hybrid.o F90_HYPRE_struct_int.o F90_HYPRE_struct_jacobi.o F90_HYPRE_struct_pcg.o F90_HYPRE_struct_pfmg.o F90_HYPRE_struct_smg.o F90_HYPRE_struct_sparse_msg.o general.o hybrid.o HYPRE_struct_bicgstab.o HYPRE_struct_cycred.o HYPRE_struct_flexgmres.o HYPRE_struct_gmres.o HYPRE_struct_hybrid.o HYPRE_struct_int.o HYPRE_struct_jacobi.o HYPRE_struct_lgmres.o HYPRE_struct_pcg.o HYPRE_struct_pfmg.o HYPRE_struct_smg.o HYPRE_struct_sparse_msg.o jacobi.o pcg_struct.o pfmg2_setup_rap.o pfmg3_setup_rap.o pfmg.o pfmg_relax.o pfmg_setup.o pfmg_setup_interp.o pfmg_setup_rap5.o pfmg_setup_rap7.o pfmg_setup_rap.o pfmg_solve.o point_relax.o red_black_constantcoef_gs.o red_black_gs.o semi.o semi_interp.o semi_restrict.o semi_setup_rap.o smg2_setup_rap.o smg3_setup_rap.o smg_axpy.o smg.o smg_relax.o smg_residual.o smg_setup.o smg_setup_interp.o smg_setup_rap.o smg_setup_restrict.o smg_solve.o sparse_msg2_setup_rap.o sparse_msg3_setup_rap.o sparse_msg.o sparse_msg_filter.o sparse_msg_interp.o sparse_msg_restrict.o sparse_msg_setup.o sparse_msg_setup_rap.o sparse_msg_solve.o -Wl,-soname,libHYPRE_struct_ls-2.18.2.so ln -s libHYPRE_struct_ls-2.18.2.so libHYPRE_struct_ls.so cp -fR ./HYPRE_*.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include cp -fR ./_hypre_struct_ls.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/struct_ls' Making sstruct_mv ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/sstruct_mv' mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -c F90_HYPRE_sstruct_graph.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -c F90_HYPRE_sstruct_grid.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -c F90_HYPRE_sstruct_matrix.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -c F90_HYPRE_sstruct_stencil.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -c F90_HYPRE_sstruct_vector.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -c HYPRE_sstruct_graph.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -c HYPRE_sstruct_grid.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -c HYPRE_sstruct_matrix.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -c HYPRE_sstruct_stencil.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -c HYPRE_sstruct_vector.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -c sstruct_axpy.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -c sstruct_copy.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -c sstruct_graph.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -c sstruct_grid.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -c sstruct_innerprod.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -c sstruct_matrix.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -c sstruct_matvec.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -c sstruct_scale.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -c sstruct_stencil.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -c sstruct_vector.c Building libHYPRE_sstruct_mv.so ... mpicc -shared -o libHYPRE_sstruct_mv-2.18.2.so F90_HYPRE_sstruct_graph.o F90_HYPRE_sstruct_grid.o F90_HYPRE_sstruct_matrix.o F90_HYPRE_sstruct_stencil.o F90_HYPRE_sstruct_vector.o HYPRE_sstruct_graph.o HYPRE_sstruct_grid.o HYPRE_sstruct_matrix.o HYPRE_sstruct_stencil.o HYPRE_sstruct_vector.o sstruct_axpy.o sstruct_copy.o sstruct_graph.o sstruct_grid.o sstruct_innerprod.o sstruct_matrix.o sstruct_matvec.o sstruct_scale.o sstruct_stencil.o sstruct_vector.o -Wl,-soname,libHYPRE_sstruct_mv-2.18.2.so ln -s libHYPRE_sstruct_mv-2.18.2.so libHYPRE_sstruct_mv.so cp -fR ./HYPRE_*.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include cp -fR ./_hypre_sstruct_mv.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/sstruct_mv' Making sstruct_ls ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/sstruct_ls' mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c F90_HYPRE_sstruct_bicgstab.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c F90_HYPRE_sstruct_gmres.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c F90_HYPRE_sstruct_flexgmres.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c F90_HYPRE_sstruct_lgmres.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c F90_HYPRE_sstruct_InterFAC.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c F90_HYPRE_sstruct_int.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c F90_HYPRE_sstruct_maxwell.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c F90_HYPRE_sstruct_pcg.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c F90_HYPRE_sstruct_split.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c F90_HYPRE_sstruct_sys_pfmg.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c HYPRE_sstruct_bicgstab.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c HYPRE_sstruct_gmres.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c HYPRE_sstruct_flexgmres.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c HYPRE_sstruct_lgmres.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c HYPRE_sstruct_InterFAC.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c HYPRE_sstruct_int.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c HYPRE_sstruct_maxwell.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c HYPRE_sstruct_pcg.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c HYPRE_sstruct_split.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c HYPRE_sstruct_sys_pfmg.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c fac.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c fac_amr_rap.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c fac_amr_fcoarsen.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c fac_amr_zero_data.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c fac_cf_coarsen.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c fac_cfstencil_box.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c fac_CFInterfaceExtents.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c fac_interp2.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c fac_relax.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c fac_restrict2.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c fac_setup2.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c fac_solve3.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c fac_zero_cdata.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c fac_zero_stencilcoef.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c hypre_bsearch.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c krylov.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c krylov_sstruct.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c eliminate_rowscols.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c maxwell_grad.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c maxwell_physbdy.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c maxwell_PNedelec.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c maxwell_PNedelec_bdy.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c maxwell_semi_interp.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c maxwell_TV.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c maxwell_TV_setup.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c maxwell_zeroBC.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c hypre_MaxwellSolve.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c hypre_MaxwellSolve2.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c nd1_amge_interpolation.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c node_relax.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c sstruct_amr_intercommunication.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c sstruct_owninfo.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c sstruct_recvinfo.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c sstruct_sendinfo.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c sstruct_sharedDOFComm.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c sys_pfmg.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c sys_pfmg_relax.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c sys_pfmg_setup.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c sys_pfmg_setup_interp.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c sys_pfmg_setup_rap.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c sys_pfmg_solve.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c sys_semi_interp.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c sys_semi_restrict.c Building libHYPRE_sstruct_ls.so ... mpicc -shared -o libHYPRE_sstruct_ls-2.18.2.so F90_HYPRE_sstruct_bicgstab.o F90_HYPRE_sstruct_gmres.o F90_HYPRE_sstruct_flexgmres.o F90_HYPRE_sstruct_lgmres.o F90_HYPRE_sstruct_InterFAC.o F90_HYPRE_sstruct_int.o F90_HYPRE_sstruct_maxwell.o F90_HYPRE_sstruct_pcg.o F90_HYPRE_sstruct_split.o F90_HYPRE_sstruct_sys_pfmg.o HYPRE_sstruct_bicgstab.o HYPRE_sstruct_gmres.o HYPRE_sstruct_flexgmres.o HYPRE_sstruct_lgmres.o HYPRE_sstruct_InterFAC.o HYPRE_sstruct_int.o HYPRE_sstruct_maxwell.o HYPRE_sstruct_pcg.o HYPRE_sstruct_split.o HYPRE_sstruct_sys_pfmg.o fac.o fac_amr_rap.o fac_amr_fcoarsen.o fac_amr_zero_data.o fac_cf_coarsen.o fac_cfstencil_box.o fac_CFInterfaceExtents.o fac_interp2.o fac_relax.o fac_restrict2.o fac_setup2.o fac_solve3.o fac_zero_cdata.o fac_zero_stencilcoef.o hypre_bsearch.o krylov.o krylov_sstruct.o eliminate_rowscols.o maxwell_grad.o maxwell_physbdy.o maxwell_PNedelec.o maxwell_PNedelec_bdy.o maxwell_semi_interp.o maxwell_TV.o maxwell_TV_setup.o maxwell_zeroBC.o hypre_MaxwellSolve.o hypre_MaxwellSolve2.o nd1_amge_interpolation.o node_relax.o sstruct_amr_intercommunication.o sstruct_owninfo.o sstruct_recvinfo.o sstruct_sendinfo.o sstruct_sharedDOFComm.o sys_pfmg.o sys_pfmg_relax.o sys_pfmg_setup.o sys_pfmg_setup_interp.o sys_pfmg_setup_rap.o sys_pfmg_solve.o sys_semi_interp.o sys_semi_restrict.o -Wl,-soname,libHYPRE_sstruct_ls-2.18.2.so ln -s libHYPRE_sstruct_ls-2.18.2.so libHYPRE_sstruct_ls.so cp -fR ./HYPRE_*.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include cp -fR ./_hypre_sstruct_ls.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/sstruct_ls' Making /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/distributed_ls ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/distributed_ls' Making pilut ... gmake[2]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/distributed_ls/pilut' mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../blas -I./../../utilities -I./../../distributed_matrix -c comm.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../blas -I./../../utilities -I./../../distributed_matrix -c debug.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../blas -I./../../utilities -I./../../distributed_matrix -c distributed_qsort.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../blas -I./../../utilities -I./../../distributed_matrix -c distributed_qsort_si.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../blas -I./../../utilities -I./../../distributed_matrix -c HYPRE_DistributedMatrixPilutSolver.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../blas -I./../../utilities -I./../../distributed_matrix -c ilut.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../blas -I./../../utilities -I./../../distributed_matrix -c parilut.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../blas -I./../../utilities -I./../../distributed_matrix -c parutil.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../blas -I./../../utilities -I./../../distributed_matrix -c pblas1.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../blas -I./../../utilities -I./../../distributed_matrix -c serilut.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../blas -I./../../utilities -I./../../distributed_matrix -c trifactor.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../blas -I./../../utilities -I./../../distributed_matrix -c util.c Building libHYPRE_DistributedMatrixPilutSolver.so ... mpicc -shared -o libHYPRE_DistributedMatrixPilutSolver-2.18.2.so comm.o debug.o distributed_qsort.o distributed_qsort_si.o HYPRE_DistributedMatrixPilutSolver.o ilut.o parilut.o parutil.o pblas1.o serilut.o trifactor.o util.o -Wl,-soname,libHYPRE_DistributedMatrixPilutSolver-2.18.2.so ln -s libHYPRE_DistributedMatrixPilutSolver-2.18.2.so libHYPRE_DistributedMatrixPilutSolver.so cp -fR ./HYPRE_*.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include gmake[2]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/distributed_ls/pilut' Making ParaSails ... gmake[2]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/distributed_ls/ParaSails' mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../blas -I./../../lapack -I./../../utilities -I./../../distributed_matrix -c ConjGrad.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../blas -I./../../lapack -I./../../utilities -I./../../distributed_matrix -c DiagScale.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../blas -I./../../lapack -I./../../utilities -I./../../distributed_matrix -c FGmres.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../blas -I./../../lapack -I./../../utilities -I./../../distributed_matrix -c Hash.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../blas -I./../../lapack -I./../../utilities -I./../../distributed_matrix -c hypre_ParaSails.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../blas -I./../../lapack -I./../../utilities -I./../../distributed_matrix -c LoadBal.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../blas -I./../../lapack -I./../../utilities -I./../../distributed_matrix -c Matrix.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../blas -I./../../lapack -I./../../utilities -I./../../distributed_matrix -c Mem.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../blas -I./../../lapack -I./../../utilities -I./../../distributed_matrix -c Numbering.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../blas -I./../../lapack -I./../../utilities -I./../../distributed_matrix -c OrderStat.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../blas -I./../../lapack -I./../../utilities -I./../../distributed_matrix -c ParaSails.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../blas -I./../../lapack -I./../../utilities -I./../../distributed_matrix -c PrunedRows.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../blas -I./../../lapack -I./../../utilities -I./../../distributed_matrix -c RowPatt.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../blas -I./../../lapack -I./../../utilities -I./../../distributed_matrix -c StoredRows.c Building libHYPRE_ParaSails.so ... mpicc -shared -o libHYPRE_ParaSails-2.18.2.so ConjGrad.o DiagScale.o FGmres.o Hash.o hypre_ParaSails.o LoadBal.o Matrix.o Mem.o Numbering.o OrderStat.o ParaSails.o PrunedRows.o RowPatt.o StoredRows.o -Wl,-soname,libHYPRE_ParaSails-2.18.2.so ln -s libHYPRE_ParaSails-2.18.2.so libHYPRE_ParaSails.so gmake[2]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/distributed_ls/ParaSails' Making Euclid ... gmake[2]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/distributed_ls/Euclid' mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -c blas_dh.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -c Euclid_apply.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -c Euclid_dh.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -c ExternalRows_dh.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -c Factor_dh.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -c getRow_dh.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -c globalObjects.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -c Hash_dh.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -c Hash_i_dh.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -c ilu_mpi_bj.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -c ilu_mpi_pilu.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -c ilu_seq.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -c io_dh.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -c krylov_dh.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -c Mat_dh.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -c mat_dh_private.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -c MatGenFD.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -c Mem_dh.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -c Numbering_dh.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -c Parser_dh.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -c shellSort_dh.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -c sig_dh.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -c SortedList_dh.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -c SortedSet_dh.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -c SubdomainGraph_dh.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -c TimeLog_dh.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -c Timer_dh.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -c Vec_dh.c Building libHYPRE_Euclid.so ... mpicc -shared -o libHYPRE_Euclid-2.18.2.so blas_dh.o Euclid_apply.o Euclid_dh.o ExternalRows_dh.o Factor_dh.o getRow_dh.o globalObjects.o Hash_dh.o Hash_i_dh.o ilu_mpi_bj.o ilu_mpi_pilu.o ilu_seq.o io_dh.o krylov_dh.o Mat_dh.o mat_dh_private.o MatGenFD.o Mem_dh.o Numbering_dh.o Parser_dh.o shellSort_dh.o sig_dh.o SortedList_dh.o SortedSet_dh.o SubdomainGraph_dh.o TimeLog_dh.o Timer_dh.o Vec_dh.o -Wl,-soname,libHYPRE_Euclid-2.18.2.so ln -s libHYPRE_Euclid-2.18.2.so libHYPRE_Euclid.so gmake[2]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/distributed_ls/Euclid' gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/distributed_ls' Making lib ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/lib' Building libHYPRE.so ... mpicc -shared -o libHYPRE-2.18.2.so /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/IJ_mv/*.o /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/distributed_ls/Euclid/*.o /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/distributed_ls/ParaSails/*.o /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/distributed_ls/pilut/*.o /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/distributed_matrix/*.o /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/krylov/*.o /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/matrix_matrix/*.o /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/multivector/*.o /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/parcsr_ls/*.o /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/parcsr_mv/*.o /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/parcsr_block_mv/*.o /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/seq_mv/*.o /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/sstruct_ls/*.o /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/sstruct_mv/*.o /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/struct_ls/*.o /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/struct_mv/*.o /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/utilities/*.o /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/blas/*.o /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/lapack/*.o -llapack -lblas /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib/pgi.ld -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib -L/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -L/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -Wl,-rpath,/usr/lib/gcc/ppc64le-redhat-linux/4.8.5 -L/usr/lib/gcc/ppc64le-redhat-linux/4.8.5 -lstdc++ -ldl -lpthread -lmpiprofilesupport -lmpi_ibm_usempi -lmpi_ibm_mpifh -lmpi_ibm -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -lpgf90rtl -lpgf90 -lpgf90_rpm1 -lpgf902 -lpgftnrtl -latomic -lpgkomp -lomp -lomptarget -lpgmath -lpgc -lrt -lmass_simdp9 -lmassvp9 -lmassp9 -lm -lgcc_s -lm -Wl,-soname,libHYPRE-2.18.2.so -Wl,-z,defs ln -s libHYPRE-2.18.2.so libHYPRE.so cp -fR libHYPRE* /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/lib gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/lib' =============================================================================== Running make install on HYPRE; this may take several minutes =============================================================================== Running Executable WITHOUT threads to time it out Executing: /usr/bin/gmake install stdout: Making blas ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/blas' gmake[1]: Nothing to be done for `all'. gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/blas' Making lapack ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/lapack' gmake[1]: Nothing to be done for `all'. gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/lapack' Making utilities ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/utilities' cp -fR ./HYPRE_*.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include cp -fR ./_hypre_utilities.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include cp -fR ./hypre_hopscotch_hash.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include cp -fR ./fortran*.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/utilities' Making multivector ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/multivector' cp -fR *.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/multivector' Making krylov ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/krylov' cp -fR ./HYPRE_*.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include cp -fR ./krylov.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include cp -fR ./lobpcg.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/krylov' Making seq_mv ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/seq_mv' cp -fR ./HYPRE_*.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include cp -fR ./seq_mv.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/seq_mv' Making parcsr_mv ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/parcsr_mv' cp -fR ./HYPRE_*.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include cp -fR ./_hypre_parcsr_mv.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/parcsr_mv' Making parcsr_block_mv ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/parcsr_block_mv' cp -fR ./par_csr_block_matrix.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include cp -fR ./csr_block_matrix.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/parcsr_block_mv' Making distributed_matrix ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/distributed_matrix' cp -fR ./distributed_matrix.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/distributed_matrix' Making IJ_mv ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/IJ_mv' cp -fR ./HYPRE_*.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include cp -fR ./_hypre_IJ_mv.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/IJ_mv' Making matrix_matrix ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/matrix_matrix' cp -fR ./HYPRE_*.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/matrix_matrix' Making parcsr_ls ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/parcsr_ls' cp -fR ./HYPRE_*.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include cp -fR ./_hypre_parcsr_ls.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/parcsr_ls' Making struct_mv ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/struct_mv' cp -fR ./HYPRE_*.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include cp -fR ./_hypre_struct_mv.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/struct_mv' Making struct_ls ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/struct_ls' cp -fR ./HYPRE_*.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include cp -fR ./_hypre_struct_ls.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/struct_ls' Making sstruct_mv ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/sstruct_mv' cp -fR ./HYPRE_*.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include cp -fR ./_hypre_sstruct_mv.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/sstruct_mv' Making sstruct_ls ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/sstruct_ls' cp -fR ./HYPRE_*.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include cp -fR ./_hypre_sstruct_ls.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/sstruct_ls' Making /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/distributed_ls ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/distributed_ls' Making pilut ... gmake[2]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/distributed_ls/pilut' cp -fR ./HYPRE_*.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include gmake[2]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/distributed_ls/pilut' Making ParaSails ... gmake[2]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/distributed_ls/ParaSails' gmake[2]: Nothing to be done for `all'. gmake[2]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/distributed_ls/ParaSails' Making Euclid ... gmake[2]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/distributed_ls/Euclid' gmake[2]: Nothing to be done for `all'. gmake[2]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/distributed_ls/Euclid' gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/distributed_ls' Making lib ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/lib' cp -fR libHYPRE* /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/lib gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/lib' Installing hypre ... ********Output of running make on HYPRE follows ******* checking build system type... powerpc64-unknown-linux-gnu checking host system type... powerpc64-unknown-linux-gnu checking whether /usr/bin/gmake sets $(MAKE)... yes checking for ranlib... ranlib checking for gcc... mpicc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... no checking whether mpicc accepts -g... yes checking for mpicc option to accept ISO C89... none needed checking whether we are using the GNU C++ compiler... yes checking whether mpiCC accepts -g... yes checking whether we are using the GNU Fortran compiler... no checking whether mpif90 accepts -g... yes checking how to get verbose linking output from mpif90... -v checking for Fortran libraries of mpif90... -L/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib -L/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -L/usr/lib64 -L/usr/lib/gcc/ppc64le-redhat-linux/4.8.5 -lpthread -lmpiprofilesupport -lmpi_ibm_usempi -lmpi_ibm_mpifh -lmpi_ibm -L/usr/lib/gcc/ppc64le-redhat-linux/4.8.5/../../../../lib64 -lpgf90rtl -lpgf90 -lpgf90_rpm1 -lpgf902 -lpgftnrtl -latomic -lpgkomp -lomp -lomptarget -ldl -lpgmath -lpgc -lrt -lmass_simdp9 -lmassvp9 -lmassp9 -lm checking for dummy main to link with Fortran libraries... none checking for Fortran name-mangling scheme... lower case, underscore, no extra underscore checking for MPI_Init... yes checking for mpi.h... yes checking for MPI_Comm_f2c... yes checking how to run the C preprocessor... mpicc -E checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking whether MPI_Comm_f2c is a macro... no checking for cabs in -lm... yes checking the hostname... batch5 checking the architecture... LINUX configure: creating ./config.status config.status: creating config/Makefile.config config.status: creating HYPRE_config.hconfigure: WARNING: unrecognized options: --without-fei configure: WARNING: unrecognized options: --without-fei Cleaning blas ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/blas' rm -rf *.o gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/blas' Cleaning lapack ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/lapack' rm -rf *.o gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/lapack' Cleaning utilities ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/utilities' rm -f *.o libHYPRE* rm -rf pchdir tca.map *inslog* gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/utilities' Cleaning multivector ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/multivector' rm -f *.o libHYPRE* rm -rf pchdir tca.map *inslog* gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/multivector' Cleaning krylov ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/krylov' rm -f *.o libHYPRE* rm -rf pchdir tca.map *inslog* gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/krylov' Cleaning seq_mv ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/seq_mv' rm -f *.o libHYPRE* rm -rf pchdir tca.map *inslog* gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/seq_mv' Cleaning parcsr_mv ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/parcsr_mv' rm -f *.o libHYPRE* rm -f driver driver_matvec driver_matmul rm -rf pchdir tca.map *inslog* gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/parcsr_mv' Cleaning parcsr_block_mv ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/parcsr_block_mv' rm -rf *.o libHYPRE_* rm -f driver driver_matvec driver_matmul gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/parcsr_block_mv' Cleaning distributed_matrix ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/distributed_matrix' rm -f *.o libHYPRE* rm -rf pchdir tca.map *inslog* gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/distributed_matrix' Cleaning IJ_mv ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/IJ_mv' rm -f *.o libHYPRE* rm -rf pchdir tca.map *inslog* gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/IJ_mv' Cleaning matrix_matrix ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/matrix_matrix' rm -f *.o lib* rm -rf pchdir tca.map *inslog* gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/matrix_matrix' Cleaning parcsr_ls ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/parcsr_ls' rm -f *.o libHYPRE* rm -rf pchdir tca.map *inslog* gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/parcsr_ls' Cleaning struct_mv ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/struct_mv' rm -f *.o libHYPRE* rm -rf pchdir tca.map *inslog* gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/struct_mv' Cleaning struct_ls ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/struct_ls' rm -f *.o libHYPRE* rm -rf pchdir tca.map *inslog* gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/struct_ls' Cleaning sstruct_mv ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/sstruct_mv' rm -f *.o libHYPRE* rm -rf pchdir tca.map *inslog* gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/sstruct_mv' Cleaning sstruct_ls ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/sstruct_ls' rm -f *.o libHYPRE* rm -rf pchdir tca.map *inslog* gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/sstruct_ls' Cleaning /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/distributed_ls ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/distributed_ls' gmake[2]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/distributed_ls/pilut' rm -f *.o libHYPRE* rm -rf pchdir tca.map *inslog* gmake[2]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/distributed_ls/pilut' gmake[2]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/distributed_ls/ParaSails' rm -f *.o libHYPRE* rm -rf pchdir tca.map *inslog* gmake[2]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/distributed_ls/ParaSails' gmake[2]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/distributed_ls/Euclid' rm -f *.o libHYPRE* rm -rf pchdir tca.map *inslog* gmake[2]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/distributed_ls/Euclid' gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/distributed_ls' Cleaning lib ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/lib' rm -f *.o libHYPRE* rm -rf pchdir tca.map *inslog* gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/lib' Cleaning docs ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/docs' make[2]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/docs/usr-manual' rm -rf _build/* make[2]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/docs/usr-manual' make[2]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/docs/ref-manual' make[2]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/docs/ref-manual' gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/docs' Cleaning test ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/test' rm -f *.o rm -rf pchdir tca.map *inslog* gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/test' Cleaning examples ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/examples' rm -f ex1.o ex2.o ex3.o ex4.o ex5.o ex5f.o ex6.o ex7.o ex8.o ex9.o ex11.o ex12.o ex12f.o ex13.o ex14.o ex15.o ex16.o rm -f ex5big.o ex15big.o rm -f ex5f.o ex12f.o rm -f ex17.o ex18.o rm -f ex18comp.o cd vis; make clean make[2]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/examples/vis' rm -f *mesh* *sol* *data* make[2]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/examples/vis' gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/examples' rm -rf tca.map pchdir *inslog*Making blas ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/blas' mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../utilities -c dasum.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../utilities -c daxpy.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../utilities -c dcopy.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../utilities -c ddot.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../utilities -c dgemm.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../utilities -c dgemv.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../utilities -c dger.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../utilities -c dnrm2.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../utilities -c drot.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../utilities -c dscal.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../utilities -c dswap.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../utilities -c dsymm.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../utilities -c dsymv.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../utilities -c dsyr2.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../utilities -c dsyr2k.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../utilities -c dsyrk.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../utilities -c dtrmm.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../utilities -c dtrmv.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../utilities -c dtrsm.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../utilities -c dtrsv.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../utilities -c f2c.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../utilities -c idamax.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../utilities -c lsame.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../utilities -c xerbla.c gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/blas' Making lapack ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/lapack' mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dbdsqr.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dgebd2.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dgebrd.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dgelq2.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dgelqf.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dgels.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dgeqr2.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dgeqrf.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dgesvd.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dgetrf.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dgetri.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dgetrs.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dgetf2.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dlabad.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dlabrd.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dlacpy.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dlae2.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dlaev2.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dlange.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dlanst.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dlansy.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dlapy2.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dlarfb.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dlarf.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dlarfg.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dlarft.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dlartg.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dlas2.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dlascl.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dlaset.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dlasq1.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dlasq2.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dlasq3.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dlasq4.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dlasq5.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dlasq6.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dlasr.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dlasrt.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dlassq.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dlaswp.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dlasv2.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dlatrd.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dorg2l.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dorg2r.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dorgbr.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dorgl2.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dorglq.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dorgql.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dorgqr.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dorgtr.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dorm2r.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dormbr.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dorml2.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dormlq.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dormqr.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dpotf2.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dpotrf.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dpotrs.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dsteqr.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dsterf.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dsyev.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dsygs2.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dsygst.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dsygv.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dsytd2.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dsytrd.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dtrtri.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dtrti2.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c ieeeck.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c ilaenv.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c lsame.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c xerbla.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../blas -I../utilities -c dlamch.c gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/lapack' Making utilities ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/utilities' mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I. -c F90_HYPRE_error.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I. -c HYPRE_version.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I. -c amg_linklist.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I. -c binsearch.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I. -c exchange_data.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I. -c fortran_matrix.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I. -c hypre_ap.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I. -c hypre_complex.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I. -c hypre_cuda_utils.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I. -c hypre_error.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I. -c hypre_general.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I. -c hypre_hopscotch_hash.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I. -c hypre_memory.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I. -c hypre_merge_sort.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I. -c hypre_mpi_comm_f2c.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I. -c hypre_omp_device.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I. -c hypre_prefix_sum.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I. -c hypre_printf.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I. -c hypre_qsort.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I. -c mpistubs.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I. -c qsplit.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I. -c random.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I. -c threading.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I. -c timer.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I. -c timing.c Building libHYPRE_utilities.so ... mpicc -shared -o libHYPRE_utilities-2.18.2.so F90_HYPRE_error.o HYPRE_version.o amg_linklist.o binsearch.o exchange_data.o fortran_matrix.o hypre_ap.o hypre_complex.o hypre_cuda_utils.o hypre_error.o hypre_general.o hypre_hopscotch_hash.o hypre_memory.o hypre_merge_sort.o hypre_mpi_comm_f2c.o hypre_omp_device.o hypre_prefix_sum.o hypre_printf.o hypre_qsort.o mpistubs.o qsplit.o random.o threading.o timer.o timing.o -Wl,-soname,libHYPRE_utilities-2.18.2.so ln -s libHYPRE_utilities-2.18.2.so libHYPRE_utilities.so cp -fR ./HYPRE_*.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include cp -fR ./_hypre_utilities.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include cp -fR ./hypre_hopscotch_hash.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include cp -fR ./fortran*.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/utilities' Making multivector ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/multivector' mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I. -I./.. -I./../utilities -c multivector.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I. -I./.. -I./../utilities -c temp_multivector.c Building libHYPRE_multivector.so ... mpicc -shared -o libHYPRE_multivector-2.18.2.so multivector.o temp_multivector.o -Wl,-soname,libHYPRE_multivector-2.18.2.so ln -s libHYPRE_multivector-2.18.2.so libHYPRE_multivector.so cp -fR *.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/multivector' Making krylov ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/krylov' mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -c bicgstab.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -c cgnr.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -c gmres.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -c cogmres.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -c flexgmres.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -c lgmres.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -c HYPRE_bicgstab.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -c HYPRE_cgnr.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -c HYPRE_gmres.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -c HYPRE_cogmres.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -c HYPRE_lgmres.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -c HYPRE_flexgmres.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -c HYPRE_pcg.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -c pcg.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -c HYPRE_lobpcg.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -c lobpcg.c Building libHYPRE_krylov.so ... mpicc -shared -o libHYPRE_krylov-2.18.2.so bicgstab.o cgnr.o gmres.o cogmres.o flexgmres.o lgmres.o HYPRE_bicgstab.o HYPRE_cgnr.o HYPRE_gmres.o HYPRE_cogmres.o HYPRE_lgmres.o HYPRE_flexgmres.o HYPRE_pcg.o pcg.o HYPRE_lobpcg.o lobpcg.o -Wl,-soname,libHYPRE_krylov-2.18.2.so ln -s libHYPRE_krylov-2.18.2.so libHYPRE_krylov.so cp -fR ./HYPRE_*.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include cp -fR ./krylov.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include cp -fR ./lobpcg.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/krylov' Making seq_mv ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/seq_mv' mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c csr_matop.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c csr_matop_device.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c csr_matrix.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c csr_matvec.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c csr_matvec_oomp.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c csr_spadd_device.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c csr_spgemm_device.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c csr_spgemm_device_attempt.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c csr_spgemm_device_confident.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c csr_spgemm_device_cusparse.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c csr_spgemm_device_rowbound.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c csr_spgemm_device_rowest.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c csr_spgemm_device_util.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c csr_sptrans_device.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c genpart.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c HYPRE_csr_matrix.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c HYPRE_mapped_matrix.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c HYPRE_multiblock_matrix.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c HYPRE_vector.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c mapped_matrix.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c multiblock_matrix.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c vector.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c vector_batched.c Building libHYPRE_seq_mv.so ... mpicc -shared -o libHYPRE_seq_mv-2.18.2.so csr_matop.o csr_matop_device.o csr_matrix.o csr_matvec.o csr_matvec_oomp.o csr_spadd_device.o csr_spgemm_device.o csr_spgemm_device_attempt.o csr_spgemm_device_confident.o csr_spgemm_device_cusparse.o csr_spgemm_device_rowbound.o csr_spgemm_device_rowest.o csr_spgemm_device_util.o csr_sptrans_device.o genpart.o HYPRE_csr_matrix.o HYPRE_mapped_matrix.o HYPRE_multiblock_matrix.o HYPRE_vector.o mapped_matrix.o multiblock_matrix.o vector.o vector_batched.o -Wl,-soname,libHYPRE_seq_mv-2.18.2.so ln -s libHYPRE_seq_mv-2.18.2.so libHYPRE_seq_mv.so cp -fR ./HYPRE_*.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include cp -fR ./seq_mv.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/seq_mv' Making parcsr_mv ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/parcsr_mv' mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../blas -I./../lapack -I./../utilities -I./../seq_mv -c communicationT.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../blas -I./../lapack -I./../utilities -I./../seq_mv -c F90_HYPRE_parcsr_matrix.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../blas -I./../lapack -I./../utilities -I./../seq_mv -c F90_HYPRE_parcsr_vector.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../blas -I./../lapack -I./../utilities -I./../seq_mv -c F90_parcsr_matrix.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../blas -I./../lapack -I./../utilities -I./../seq_mv -c F90_par_vector.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../blas -I./../lapack -I./../utilities -I./../seq_mv -c HYPRE_parcsr_matrix.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../blas -I./../lapack -I./../utilities -I./../seq_mv -c HYPRE_parcsr_vector.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../blas -I./../lapack -I./../utilities -I./../seq_mv -c new_commpkg.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../blas -I./../lapack -I./../utilities -I./../seq_mv -c numbers.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../blas -I./../lapack -I./../utilities -I./../seq_mv -c par_csr_aat.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../blas -I./../lapack -I./../utilities -I./../seq_mv -c par_csr_assumed_part.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../blas -I./../lapack -I./../utilities -I./../seq_mv -c par_csr_bool_matop.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../blas -I./../lapack -I./../utilities -I./../seq_mv -c par_csr_bool_matrix.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../blas -I./../lapack -I./../utilities -I./../seq_mv -c par_csr_communication.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../blas -I./../lapack -I./../utilities -I./../seq_mv -c par_csr_matop.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../blas -I./../lapack -I./../utilities -I./../seq_mv -c par_csr_matop_device.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../blas -I./../lapack -I./../utilities -I./../seq_mv -c par_csr_matrix.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../blas -I./../lapack -I./../utilities -I./../seq_mv -c par_csr_matop_marked.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../blas -I./../lapack -I./../utilities -I./../seq_mv -c par_csr_matvec.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../blas -I./../lapack -I./../utilities -I./../seq_mv -c par_csr_triplemat.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../blas -I./../lapack -I./../utilities -I./../seq_mv -c par_csr_triplemat_device.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../blas -I./../lapack -I./../utilities -I./../seq_mv -c par_vector.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../blas -I./../lapack -I./../utilities -I./../seq_mv -c par_make_system.c Building libHYPRE_parcsr_mv.so ... mpicc -shared -o libHYPRE_parcsr_mv-2.18.2.so communicationT.o F90_HYPRE_parcsr_matrix.o F90_HYPRE_parcsr_vector.o F90_parcsr_matrix.o F90_par_vector.o HYPRE_parcsr_matrix.o HYPRE_parcsr_vector.o new_commpkg.o numbers.o par_csr_aat.o par_csr_assumed_part.o par_csr_bool_matop.o par_csr_bool_matrix.o par_csr_communication.o par_csr_matop.o par_csr_matop_device.o par_csr_matrix.o par_csr_matop_marked.o par_csr_matvec.o par_csr_triplemat.o par_csr_triplemat_device.o par_vector.o par_make_system.o -Wl,-soname,libHYPRE_parcsr_mv-2.18.2.so ln -s libHYPRE_parcsr_mv-2.18.2.so libHYPRE_parcsr_mv.so cp -fR ./HYPRE_*.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include cp -fR ./_hypre_parcsr_mv.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/parcsr_mv' Making parcsr_block_mv ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/parcsr_block_mv' mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../multivector -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -I./../IJ_mv -I./../krylov -c csr_block_matrix.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../multivector -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -I./../IJ_mv -I./../krylov -c csr_block_matvec.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../multivector -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -I./../IJ_mv -I./../krylov -c par_csr_block_matrix.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../multivector -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -I./../IJ_mv -I./../krylov -c par_csr_block_matvec.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../multivector -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -I./../IJ_mv -I./../krylov -c par_csr_block_comm.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../multivector -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -I./../IJ_mv -I./../krylov -c par_csr_block_rap.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../multivector -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -I./../IJ_mv -I./../krylov -c par_csr_block_rap_communication.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../multivector -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -I./../IJ_mv -I./../krylov -c par_csr_block_interp.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../multivector -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -I./../IJ_mv -I./../krylov -c par_csr_block_relax.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../multivector -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -I./../IJ_mv -I./../krylov -c par_block_nodal_systems.c Building libHYPRE_parcsr_block_mv.so ... mpicc -shared -o libHYPRE_parcsr_block_mv-2.18.2.so csr_block_matrix.o csr_block_matvec.o par_csr_block_matrix.o par_csr_block_matvec.o par_csr_block_comm.o par_csr_block_rap.o par_csr_block_rap_communication.o par_csr_block_interp.o par_csr_block_relax.o par_block_nodal_systems.o -Wl,-soname,libHYPRE_parcsr_block_mv-2.18.2.so ln -s libHYPRE_parcsr_block_mv-2.18.2.so libHYPRE_parcsr_block_mv.so cp -fR ./par_csr_block_matrix.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include cp -fR ./csr_block_matrix.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/parcsr_block_mv' Making distributed_matrix ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/distributed_matrix' mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../parcsr_mv -I./../seq_mv -c distributed_matrix.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../parcsr_mv -I./../seq_mv -c HYPRE_distributed_matrix.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../parcsr_mv -I./../seq_mv -c distributed_matrix_ISIS.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../parcsr_mv -I./../seq_mv -c distributed_matrix_PETSc.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../parcsr_mv -I./../seq_mv -c distributed_matrix_parcsr.c Building libHYPRE_DistributedMatrix.so ... mpicc -shared -o libHYPRE_DistributedMatrix-2.18.2.so distributed_matrix.o HYPRE_distributed_matrix.o distributed_matrix_ISIS.o distributed_matrix_PETSc.o distributed_matrix_parcsr.o -Wl,-soname,libHYPRE_DistributedMatrix-2.18.2.so ln -s libHYPRE_DistributedMatrix-2.18.2.so libHYPRE_DistributedMatrix.so cp -fR ./distributed_matrix.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/distributed_matrix' Making IJ_mv ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/IJ_mv' mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -c aux_parcsr_matrix.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -c aux_par_vector.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -c F90_HYPRE_IJMatrix.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -c F90_HYPRE_IJVector.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -c F90_IJMatrix.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -c HYPRE_IJMatrix.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -c HYPRE_IJVector.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -c IJ_assumed_part.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -c IJMatrix.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -c IJMatrix_parcsr.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -c IJVector.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../parcsr_ls -c IJVector_parcsr.c Building libHYPRE_IJ_mv.so ... mpicc -shared -o libHYPRE_IJ_mv-2.18.2.so aux_parcsr_matrix.o aux_par_vector.o F90_HYPRE_IJMatrix.o F90_HYPRE_IJVector.o F90_IJMatrix.o HYPRE_IJMatrix.o HYPRE_IJVector.o IJ_assumed_part.o IJMatrix.o IJMatrix_parcsr.o IJVector.o IJVector_parcsr.o -Wl,-soname,libHYPRE_IJ_mv-2.18.2.so ln -s libHYPRE_IJ_mv-2.18.2.so libHYPRE_IJ_mv.so cp -fR ./HYPRE_*.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include cp -fR ./_hypre_IJ_mv.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/IJ_mv' Making matrix_matrix ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/matrix_matrix' mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../distributed_matrix -I./../seq_mv -I./../parcsr_mv -c HYPRE_ConvertParCSRMatrixToDistributedMatrix.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I./.. -I./../utilities -I./../distributed_matrix -I./../seq_mv -I./../parcsr_mv -c HYPRE_ConvertPETScMatrixToDistributedMatrix.c Building libHYPRE_MatrixMatrix.so ... mpicc -shared -o libHYPRE_MatrixMatrix-2.18.2.so HYPRE_ConvertParCSRMatrixToDistributedMatrix.o HYPRE_ConvertPETScMatrixToDistributedMatrix.o -Wl,-soname,libHYPRE_MatrixMatrix-2.18.2.so ln -s libHYPRE_MatrixMatrix-2.18.2.so libHYPRE_MatrixMatrix.so cp -fR ./HYPRE_*.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/matrix_matrix' Making parcsr_ls ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/parcsr_ls' mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c amg_hybrid.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c aux_interp.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c F90_hypre_laplace.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c F90_HYPRE_parcsr_amg.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c F90_HYPRE_parcsr_bicgstab.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c F90_HYPRE_parcsr_block.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c F90_HYPRE_parcsr_cgnr.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c F90_HYPRE_parcsr_Euclid.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c F90_HYPRE_parcsr_gmres.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c F90_HYPRE_parcsr_cogmres.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c F90_HYPRE_parcsr_flexgmres.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c F90_HYPRE_parcsr_lgmres.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c F90_HYPRE_parcsr_hybrid.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c F90_HYPRE_parcsr_int.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c F90_HYPRE_parcsr_ParaSails.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c F90_HYPRE_parcsr_pcg.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c F90_HYPRE_parcsr_pilut.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c F90_HYPRE_parcsr_schwarz.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c F90_HYPRE_ams.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c gen_redcs_mat.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c HYPRE_parcsr_amg.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c HYPRE_parcsr_bicgstab.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c HYPRE_parcsr_block.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c HYPRE_parcsr_cgnr.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c HYPRE_parcsr_Euclid.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c HYPRE_parcsr_gmres.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c HYPRE_parcsr_cogmres.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c HYPRE_parcsr_flexgmres.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c HYPRE_parcsr_lgmres.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c HYPRE_parcsr_hybrid.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c HYPRE_parcsr_int.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c HYPRE_parcsr_mgr.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c HYPRE_parcsr_ParaSails.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c HYPRE_parcsr_pcg.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c HYPRE_parcsr_pilut.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c HYPRE_parcsr_schwarz.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c HYPRE_ams.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c HYPRE_ads.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c HYPRE_ame.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_amg.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_amg_setup.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_amg_solve.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_amg_solveT.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_cg_relax_wt.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_coarsen.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_coarsen_device.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_cgc_coarsen.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_cheby.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_coarse_parms.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_coordinates.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_cr.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_cycle.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_add_cycle.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_difconv.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_gauss_elim.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_gsmg.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_indepset.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_indepset_device.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_interp.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_interp_device.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_interp_trunc_device.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_jacobi_interp.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_multi_interp.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_laplace.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_laplace_27pt.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_laplace_9pt.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_lr_interp.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_mgr.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_mgr_setup.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_mgr_solve.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_nongalerkin.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_nodal_systems.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_rap.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_rap_communication.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_rotate_7pt.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_relax.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_relax_more.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_relax_interface.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_scaled_matnorm.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_schwarz.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_stats.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_strength.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_strength_device.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_sv_interp.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_sv_interp_ln.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_vardifconv.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_vardifconv_rs.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c partial.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c pcg_par.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c schwarz.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c block_tridiag.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c ams.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c ads.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c ame.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_restr.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c par_lr_restr.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I../distributed_ls/Euclid -I. -I./.. -I./../blas -I./../lapack -I./../multivector -I./../utilities -I./../krylov -I./../seq_mv -I./../parcsr_mv -I./../distributed_matrix -I./../matrix_matrix -I./../IJ_mv -I./../parcsr_block_mv -c superlu.c Building libHYPRE_parcsr_ls.so ... mpicc -shared -o libHYPRE_parcsr_ls-2.18.2.so amg_hybrid.o aux_interp.o F90_hypre_laplace.o F90_HYPRE_parcsr_amg.o F90_HYPRE_parcsr_bicgstab.o F90_HYPRE_parcsr_block.o F90_HYPRE_parcsr_cgnr.o F90_HYPRE_parcsr_Euclid.o F90_HYPRE_parcsr_gmres.o F90_HYPRE_parcsr_cogmres.o F90_HYPRE_parcsr_flexgmres.o F90_HYPRE_parcsr_lgmres.o F90_HYPRE_parcsr_hybrid.o F90_HYPRE_parcsr_int.o F90_HYPRE_parcsr_ParaSails.o F90_HYPRE_parcsr_pcg.o F90_HYPRE_parcsr_pilut.o F90_HYPRE_parcsr_schwarz.o F90_HYPRE_ams.o gen_redcs_mat.o HYPRE_parcsr_amg.o HYPRE_parcsr_bicgstab.o HYPRE_parcsr_block.o HYPRE_parcsr_cgnr.o HYPRE_parcsr_Euclid.o HYPRE_parcsr_gmres.o HYPRE_parcsr_cogmres.o HYPRE_parcsr_flexgmres.o HYPRE_parcsr_lgmres.o HYPRE_parcsr_hybrid.o HYPRE_parcsr_int.o HYPRE_parcsr_mgr.o HYPRE_parcsr_ParaSails.o HYPRE_parcsr_pcg.o HYPRE_parcsr_pilut.o HYPRE_parcsr_schwarz.o HYPRE_ams.o HYPRE_ads.o HYPRE_ame.o par_amg.o par_amg_setup.o par_amg_solve.o par_amg_solveT.o par_cg_relax_wt.o par_coarsen.o par_coarsen_device.o par_cgc_coarsen.o par_cheby.o par_coarse_parms.o par_coordinates.o par_cr.o par_cycle.o par_add_cycle.o par_difconv.o par_gauss_elim.o par_gsmg.o par_indepset.o par_indepset_device.o par_interp.o par_interp_device.o par_interp_trunc_device.o par_jacobi_interp.o par_multi_interp.o par_laplace.o par_laplace_27pt.o par_laplace_9pt.o par_lr_interp.o par_mgr.o par_mgr_setup.o par_mgr_solve.o par_nongalerkin.o par_nodal_systems.o par_rap.o par_rap_communication.o par_rotate_7pt.o par_relax.o par_relax_more.o par_relax_interface.o par_scaled_matnorm.o par_schwarz.o par_stats.o par_strength.o par_strength_device.o par_sv_interp.o par_sv_interp_ln.o par_vardifconv.o par_vardifconv_rs.o partial.o pcg_par.o schwarz.o block_tridiag.o ams.o ads.o ame.o par_restr.o par_lr_restr.o superlu.o -Wl,-soname,libHYPRE_parcsr_ls-2.18.2.so ln -s libHYPRE_parcsr_ls-2.18.2.so libHYPRE_parcsr_ls.so cp -fR ./HYPRE_*.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include cp -fR ./_hypre_parcsr_ls.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/parcsr_ls' Making struct_mv ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/struct_mv' mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c assumed_part.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c box_algebra.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c box_boundary.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c box.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c box_manager.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c communication_info.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c computation.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c F90_HYPRE_struct_grid.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c F90_HYPRE_struct_matrix.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c F90_HYPRE_struct_stencil.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c F90_HYPRE_struct_vector.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c HYPRE_struct_grid.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c HYPRE_struct_matrix.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c HYPRE_struct_stencil.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c HYPRE_struct_vector.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c project.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c struct_axpy.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c struct_communication.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c struct_copy.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c struct_grid.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c struct_innerprod.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c struct_io.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c struct_matrix.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c struct_matrix_mask.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c struct_matvec.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c struct_scale.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c struct_stencil.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -c struct_vector.c Building libHYPRE_struct_mv.so ... mpicc -shared -o libHYPRE_struct_mv-2.18.2.so assumed_part.o box_algebra.o box_boundary.o box.o box_manager.o communication_info.o computation.o F90_HYPRE_struct_grid.o F90_HYPRE_struct_matrix.o F90_HYPRE_struct_stencil.o F90_HYPRE_struct_vector.o HYPRE_struct_grid.o HYPRE_struct_matrix.o HYPRE_struct_stencil.o HYPRE_struct_vector.o project.o struct_axpy.o struct_communication.o struct_copy.o struct_grid.o struct_innerprod.o struct_io.o struct_matrix.o struct_matrix_mask.o struct_matvec.o struct_scale.o struct_stencil.o struct_vector.o -Wl,-soname,libHYPRE_struct_mv-2.18.2.so ln -s libHYPRE_struct_mv-2.18.2.so libHYPRE_struct_mv.so cp -fR ./HYPRE_*.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include cp -fR ./_hypre_struct_mv.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/struct_mv' Making struct_ls ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/struct_ls' mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c coarsen.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c cyclic_reduction.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c F90_HYPRE_struct_bicgstab.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c F90_HYPRE_struct_cycred.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c F90_HYPRE_struct_flexgmres.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c F90_HYPRE_struct_gmres.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c F90_HYPRE_struct_lgmres.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c F90_HYPRE_struct_hybrid.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c F90_HYPRE_struct_int.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c F90_HYPRE_struct_jacobi.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c F90_HYPRE_struct_pcg.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c F90_HYPRE_struct_pfmg.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c F90_HYPRE_struct_smg.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c F90_HYPRE_struct_sparse_msg.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c general.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c hybrid.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c HYPRE_struct_bicgstab.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c HYPRE_struct_cycred.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c HYPRE_struct_flexgmres.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c HYPRE_struct_gmres.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c HYPRE_struct_hybrid.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c HYPRE_struct_int.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c HYPRE_struct_jacobi.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c HYPRE_struct_lgmres.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c HYPRE_struct_pcg.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c HYPRE_struct_pfmg.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c HYPRE_struct_smg.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c HYPRE_struct_sparse_msg.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c jacobi.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c pcg_struct.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c pfmg2_setup_rap.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c pfmg3_setup_rap.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c pfmg.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c pfmg_relax.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c pfmg_setup.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c pfmg_setup_interp.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c pfmg_setup_rap5.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c pfmg_setup_rap7.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c pfmg_setup_rap.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c pfmg_solve.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c point_relax.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c red_black_constantcoef_gs.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c red_black_gs.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c semi.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c semi_interp.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c semi_restrict.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c semi_setup_rap.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c smg2_setup_rap.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c smg3_setup_rap.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c smg_axpy.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c smg.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c smg_relax.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c smg_residual.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c smg_setup.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c smg_setup_interp.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c smg_setup_rap.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c smg_setup_restrict.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c smg_solve.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c sparse_msg2_setup_rap.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c sparse_msg3_setup_rap.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c sparse_msg.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c sparse_msg_filter.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c sparse_msg_interp.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c sparse_msg_restrict.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c sparse_msg_setup.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c sparse_msg_setup_rap.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -c sparse_msg_solve.c Building libHYPRE_struct_ls.so ... mpicc -shared -o libHYPRE_struct_ls-2.18.2.so coarsen.o cyclic_reduction.o F90_HYPRE_struct_bicgstab.o F90_HYPRE_struct_cycred.o F90_HYPRE_struct_flexgmres.o F90_HYPRE_struct_gmres.o F90_HYPRE_struct_lgmres.o F90_HYPRE_struct_hybrid.o F90_HYPRE_struct_int.o F90_HYPRE_struct_jacobi.o F90_HYPRE_struct_pcg.o F90_HYPRE_struct_pfmg.o F90_HYPRE_struct_smg.o F90_HYPRE_struct_sparse_msg.o general.o hybrid.o HYPRE_struct_bicgstab.o HYPRE_struct_cycred.o HYPRE_struct_flexgmres.o HYPRE_struct_gmres.o HYPRE_struct_hybrid.o HYPRE_struct_int.o HYPRE_struct_jacobi.o HYPRE_struct_lgmres.o HYPRE_struct_pcg.o HYPRE_struct_pfmg.o HYPRE_struct_smg.o HYPRE_struct_sparse_msg.o jacobi.o pcg_struct.o pfmg2_setup_rap.o pfmg3_setup_rap.o pfmg.o pfmg_relax.o pfmg_setup.o pfmg_setup_interp.o pfmg_setup_rap5.o pfmg_setup_rap7.o pfmg_setup_rap.o pfmg_solve.o point_relax.o red_black_constantcoef_gs.o red_black_gs.o semi.o semi_interp.o semi_restrict.o semi_setup_rap.o smg2_setup_rap.o smg3_setup_rap.o smg_axpy.o smg.o smg_relax.o smg_residual.o smg_setup.o smg_setup_interp.o smg_setup_rap.o smg_setup_restrict.o smg_solve.o sparse_msg2_setup_rap.o sparse_msg3_setup_rap.o sparse_msg.o sparse_msg_filter.o sparse_msg_interp.o sparse_msg_restrict.o sparse_msg_setup.o sparse_msg_setup_rap.o sparse_msg_solve.o -Wl,-soname,libHYPRE_struct_ls-2.18.2.so ln -s libHYPRE_struct_ls-2.18.2.so libHYPRE_struct_ls.so cp -fR ./HYPRE_*.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include cp -fR ./_hypre_struct_ls.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/struct_ls' Making sstruct_mv ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/sstruct_mv' mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -c F90_HYPRE_sstruct_graph.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -c F90_HYPRE_sstruct_grid.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -c F90_HYPRE_sstruct_matrix.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -c F90_HYPRE_sstruct_stencil.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -c F90_HYPRE_sstruct_vector.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -c HYPRE_sstruct_graph.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -c HYPRE_sstruct_grid.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -c HYPRE_sstruct_matrix.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -c HYPRE_sstruct_stencil.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -c HYPRE_sstruct_vector.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -c sstruct_axpy.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -c sstruct_copy.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -c sstruct_graph.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -c sstruct_grid.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -c sstruct_innerprod.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -c sstruct_matrix.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -c sstruct_matvec.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -c sstruct_scale.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -c sstruct_stencil.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../utilities -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -c sstruct_vector.c Building libHYPRE_sstruct_mv.so ... mpicc -shared -o libHYPRE_sstruct_mv-2.18.2.so F90_HYPRE_sstruct_graph.o F90_HYPRE_sstruct_grid.o F90_HYPRE_sstruct_matrix.o F90_HYPRE_sstruct_stencil.o F90_HYPRE_sstruct_vector.o HYPRE_sstruct_graph.o HYPRE_sstruct_grid.o HYPRE_sstruct_matrix.o HYPRE_sstruct_stencil.o HYPRE_sstruct_vector.o sstruct_axpy.o sstruct_copy.o sstruct_graph.o sstruct_grid.o sstruct_innerprod.o sstruct_matrix.o sstruct_matvec.o sstruct_scale.o sstruct_stencil.o sstruct_vector.o -Wl,-soname,libHYPRE_sstruct_mv-2.18.2.so ln -s libHYPRE_sstruct_mv-2.18.2.so libHYPRE_sstruct_mv.so cp -fR ./HYPRE_*.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include cp -fR ./_hypre_sstruct_mv.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/sstruct_mv' Making sstruct_ls ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/sstruct_ls' mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c F90_HYPRE_sstruct_bicgstab.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c F90_HYPRE_sstruct_gmres.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c F90_HYPRE_sstruct_flexgmres.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c F90_HYPRE_sstruct_lgmres.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c F90_HYPRE_sstruct_InterFAC.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c F90_HYPRE_sstruct_int.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c F90_HYPRE_sstruct_maxwell.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c F90_HYPRE_sstruct_pcg.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c F90_HYPRE_sstruct_split.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c F90_HYPRE_sstruct_sys_pfmg.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c HYPRE_sstruct_bicgstab.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c HYPRE_sstruct_gmres.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c HYPRE_sstruct_flexgmres.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c HYPRE_sstruct_lgmres.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c HYPRE_sstruct_InterFAC.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c HYPRE_sstruct_int.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c HYPRE_sstruct_maxwell.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c HYPRE_sstruct_pcg.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c HYPRE_sstruct_split.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c HYPRE_sstruct_sys_pfmg.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c fac.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c fac_amr_rap.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c fac_amr_fcoarsen.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c fac_amr_zero_data.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c fac_cf_coarsen.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c fac_cfstencil_box.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c fac_CFInterfaceExtents.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c fac_interp2.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c fac_relax.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c fac_restrict2.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c fac_setup2.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c fac_solve3.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c fac_zero_cdata.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c fac_zero_stencilcoef.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c hypre_bsearch.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c krylov.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c krylov_sstruct.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c eliminate_rowscols.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c maxwell_grad.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c maxwell_physbdy.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c maxwell_PNedelec.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c maxwell_PNedelec_bdy.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c maxwell_semi_interp.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c maxwell_TV.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c maxwell_TV_setup.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c maxwell_zeroBC.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c hypre_MaxwellSolve.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c hypre_MaxwellSolve2.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c nd1_amge_interpolation.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c node_relax.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c sstruct_amr_intercommunication.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c sstruct_owninfo.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c sstruct_recvinfo.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c sstruct_sendinfo.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c sstruct_sharedDOFComm.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c sys_pfmg.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c sys_pfmg_relax.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c sys_pfmg_setup.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c sys_pfmg_setup_interp.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c sys_pfmg_setup_rap.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c sys_pfmg_solve.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c sys_semi_interp.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I.. -I. -I./.. -I./../multivector -I./../utilities -I./../krylov -I./../struct_mv -I./../seq_mv -I./../parcsr_mv -I./../IJ_mv -I./../sstruct_mv -I./../struct_ls -I./../parcsr_ls -c sys_semi_restrict.c Building libHYPRE_sstruct_ls.so ... mpicc -shared -o libHYPRE_sstruct_ls-2.18.2.so F90_HYPRE_sstruct_bicgstab.o F90_HYPRE_sstruct_gmres.o F90_HYPRE_sstruct_flexgmres.o F90_HYPRE_sstruct_lgmres.o F90_HYPRE_sstruct_InterFAC.o F90_HYPRE_sstruct_int.o F90_HYPRE_sstruct_maxwell.o F90_HYPRE_sstruct_pcg.o F90_HYPRE_sstruct_split.o F90_HYPRE_sstruct_sys_pfmg.o HYPRE_sstruct_bicgstab.o HYPRE_sstruct_gmres.o HYPRE_sstruct_flexgmres.o HYPRE_sstruct_lgmres.o HYPRE_sstruct_InterFAC.o HYPRE_sstruct_int.o HYPRE_sstruct_maxwell.o HYPRE_sstruct_pcg.o HYPRE_sstruct_split.o HYPRE_sstruct_sys_pfmg.o fac.o fac_amr_rap.o fac_amr_fcoarsen.o fac_amr_zero_data.o fac_cf_coarsen.o fac_cfstencil_box.o fac_CFInterfaceExtents.o fac_interp2.o fac_relax.o fac_restrict2.o fac_setup2.o fac_solve3.o fac_zero_cdata.o fac_zero_stencilcoef.o hypre_bsearch.o krylov.o krylov_sstruct.o eliminate_rowscols.o maxwell_grad.o maxwell_physbdy.o maxwell_PNedelec.o maxwell_PNedelec_bdy.o maxwell_semi_interp.o maxwell_TV.o maxwell_TV_setup.o maxwell_zeroBC.o hypre_MaxwellSolve.o hypre_MaxwellSolve2.o nd1_amge_interpolation.o node_relax.o sstruct_amr_intercommunication.o sstruct_owninfo.o sstruct_recvinfo.o sstruct_sendinfo.o sstruct_sharedDOFComm.o sys_pfmg.o sys_pfmg_relax.o sys_pfmg_setup.o sys_pfmg_setup_interp.o sys_pfmg_setup_rap.o sys_pfmg_solve.o sys_semi_interp.o sys_semi_restrict.o -Wl,-soname,libHYPRE_sstruct_ls-2.18.2.so ln -s libHYPRE_sstruct_ls-2.18.2.so libHYPRE_sstruct_ls.so cp -fR ./HYPRE_*.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include cp -fR ./_hypre_sstruct_ls.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/sstruct_ls' Making /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/distributed_ls ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/distributed_ls' Making pilut ... gmake[2]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/distributed_ls/pilut' mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../blas -I./../../utilities -I./../../distributed_matrix -c comm.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../blas -I./../../utilities -I./../../distributed_matrix -c debug.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../blas -I./../../utilities -I./../../distributed_matrix -c distributed_qsort.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../blas -I./../../utilities -I./../../distributed_matrix -c distributed_qsort_si.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../blas -I./../../utilities -I./../../distributed_matrix -c HYPRE_DistributedMatrixPilutSolver.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../blas -I./../../utilities -I./../../distributed_matrix -c ilut.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../blas -I./../../utilities -I./../../distributed_matrix -c parilut.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../blas -I./../../utilities -I./../../distributed_matrix -c parutil.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../blas -I./../../utilities -I./../../distributed_matrix -c pblas1.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../blas -I./../../utilities -I./../../distributed_matrix -c serilut.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../blas -I./../../utilities -I./../../distributed_matrix -c trifactor.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../blas -I./../../utilities -I./../../distributed_matrix -c util.c Building libHYPRE_DistributedMatrixPilutSolver.so ... mpicc -shared -o libHYPRE_DistributedMatrixPilutSolver-2.18.2.so comm.o debug.o distributed_qsort.o distributed_qsort_si.o HYPRE_DistributedMatrixPilutSolver.o ilut.o parilut.o parutil.o pblas1.o serilut.o trifactor.o util.o -Wl,-soname,libHYPRE_DistributedMatrixPilutSolver-2.18.2.so ln -s libHYPRE_DistributedMatrixPilutSolver-2.18.2.so libHYPRE_DistributedMatrixPilutSolver.so cp -fR ./HYPRE_*.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include gmake[2]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/distributed_ls/pilut' Making ParaSails ... gmake[2]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/distributed_ls/ParaSails' mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../blas -I./../../lapack -I./../../utilities -I./../../distributed_matrix -c ConjGrad.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../blas -I./../../lapack -I./../../utilities -I./../../distributed_matrix -c DiagScale.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../blas -I./../../lapack -I./../../utilities -I./../../distributed_matrix -c FGmres.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../blas -I./../../lapack -I./../../utilities -I./../../distributed_matrix -c Hash.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../blas -I./../../lapack -I./../../utilities -I./../../distributed_matrix -c hypre_ParaSails.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../blas -I./../../lapack -I./../../utilities -I./../../distributed_matrix -c LoadBal.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../blas -I./../../lapack -I./../../utilities -I./../../distributed_matrix -c Matrix.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../blas -I./../../lapack -I./../../utilities -I./../../distributed_matrix -c Mem.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../blas -I./../../lapack -I./../../utilities -I./../../distributed_matrix -c Numbering.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../blas -I./../../lapack -I./../../utilities -I./../../distributed_matrix -c OrderStat.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../blas -I./../../lapack -I./../../utilities -I./../../distributed_matrix -c ParaSails.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../blas -I./../../lapack -I./../../utilities -I./../../distributed_matrix -c PrunedRows.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../blas -I./../../lapack -I./../../utilities -I./../../distributed_matrix -c RowPatt.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../blas -I./../../lapack -I./../../utilities -I./../../distributed_matrix -c StoredRows.c Building libHYPRE_ParaSails.so ... mpicc -shared -o libHYPRE_ParaSails-2.18.2.so ConjGrad.o DiagScale.o FGmres.o Hash.o hypre_ParaSails.o LoadBal.o Matrix.o Mem.o Numbering.o OrderStat.o ParaSails.o PrunedRows.o RowPatt.o StoredRows.o -Wl,-soname,libHYPRE_ParaSails-2.18.2.so ln -s libHYPRE_ParaSails-2.18.2.so libHYPRE_ParaSails.so gmake[2]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/distributed_ls/ParaSails' Making Euclid ... gmake[2]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/distributed_ls/Euclid' mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -c blas_dh.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -c Euclid_apply.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -c Euclid_dh.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -c ExternalRows_dh.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -c Factor_dh.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -c getRow_dh.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -c globalObjects.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -c Hash_dh.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -c Hash_i_dh.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -c ilu_mpi_bj.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -c ilu_mpi_pilu.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -c ilu_seq.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -c io_dh.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -c krylov_dh.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -c Mat_dh.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -c mat_dh_private.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -c MatGenFD.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -c Mem_dh.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -c Numbering_dh.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -c Parser_dh.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -c shellSort_dh.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -c sig_dh.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -c SortedList_dh.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -c SortedSet_dh.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -c SubdomainGraph_dh.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -c TimeLog_dh.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -c Timer_dh.c mpicc -g -fast -fPIC -DHAVE_CONFIG_H -I../.. -I. -I./../.. -I./../../utilities -I./../../parcsr_mv -I./../../seq_mv -I./../../distributed_matrix -I./../../hypre/include -c Vec_dh.c Building libHYPRE_Euclid.so ... mpicc -shared -o libHYPRE_Euclid-2.18.2.so blas_dh.o Euclid_apply.o Euclid_dh.o ExternalRows_dh.o Factor_dh.o getRow_dh.o globalObjects.o Hash_dh.o Hash_i_dh.o ilu_mpi_bj.o ilu_mpi_pilu.o ilu_seq.o io_dh.o krylov_dh.o Mat_dh.o mat_dh_private.o MatGenFD.o Mem_dh.o Numbering_dh.o Parser_dh.o shellSort_dh.o sig_dh.o SortedList_dh.o SortedSet_dh.o SubdomainGraph_dh.o TimeLog_dh.o Timer_dh.o Vec_dh.o -Wl,-soname,libHYPRE_Euclid-2.18.2.so ln -s libHYPRE_Euclid-2.18.2.so libHYPRE_Euclid.so gmake[2]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/distributed_ls/Euclid' gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/distributed_ls' Making lib ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/lib' Building libHYPRE.so ... mpicc -shared -o libHYPRE-2.18.2.so /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/IJ_mv/*.o /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/distributed_ls/Euclid/*.o /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/distributed_ls/ParaSails/*.o /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/distributed_ls/pilut/*.o /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/distributed_matrix/*.o /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/krylov/*.o /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/matrix_matrix/*.o /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/multivector/*.o /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/parcsr_ls/*.o /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/parcsr_mv/*.o /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/parcsr_block_mv/*.o /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/seq_mv/*.o /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/sstruct_ls/*.o /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/sstruct_mv/*.o /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/struct_ls/*.o /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/struct_mv/*.o /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/utilities/*.o /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/blas/*.o /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/lapack/*.o -llapack -lblas /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib/pgi.ld -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib -L/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -L/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -Wl,-rpath,/usr/lib/gcc/ppc64le-redhat-linux/4.8.5 -L/usr/lib/gcc/ppc64le-redhat-linux/4.8.5 -lstdc++ -ldl -lpthread -lmpiprofilesupport -lmpi_ibm_usempi -lmpi_ibm_mpifh -lmpi_ibm -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -lpgf90rtl -lpgf90 -lpgf90_rpm1 -lpgf902 -lpgftnrtl -latomic -lpgkomp -lomp -lomptarget -lpgmath -lpgc -lrt -lmass_simdp9 -lmassvp9 -lmassp9 -lm -lgcc_s -lm -Wl,-soname,libHYPRE-2.18.2.so -Wl,-z,defs ln -s libHYPRE-2.18.2.so libHYPRE.so cp -fR libHYPRE* /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/lib gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/lib'Making blas ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/blas' gmake[1]: Nothing to be done for `all'. gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/blas' Making lapack ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/lapack' gmake[1]: Nothing to be done for `all'. gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/lapack' Making utilities ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/utilities' cp -fR ./HYPRE_*.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include cp -fR ./_hypre_utilities.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include cp -fR ./hypre_hopscotch_hash.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include cp -fR ./fortran*.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/utilities' Making multivector ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/multivector' cp -fR *.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/multivector' Making krylov ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/krylov' cp -fR ./HYPRE_*.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include cp -fR ./krylov.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include cp -fR ./lobpcg.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/krylov' Making seq_mv ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/seq_mv' cp -fR ./HYPRE_*.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include cp -fR ./seq_mv.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/seq_mv' Making parcsr_mv ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/parcsr_mv' cp -fR ./HYPRE_*.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include cp -fR ./_hypre_parcsr_mv.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/parcsr_mv' Making parcsr_block_mv ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/parcsr_block_mv' cp -fR ./par_csr_block_matrix.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include cp -fR ./csr_block_matrix.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/parcsr_block_mv' Making distributed_matrix ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/distributed_matrix' cp -fR ./distributed_matrix.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/distributed_matrix' Making IJ_mv ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/IJ_mv' cp -fR ./HYPRE_*.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include cp -fR ./_hypre_IJ_mv.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/IJ_mv' Making matrix_matrix ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/matrix_matrix' cp -fR ./HYPRE_*.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/matrix_matrix' Making parcsr_ls ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/parcsr_ls' cp -fR ./HYPRE_*.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include cp -fR ./_hypre_parcsr_ls.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/parcsr_ls' Making struct_mv ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/struct_mv' cp -fR ./HYPRE_*.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include cp -fR ./_hypre_struct_mv.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/struct_mv' Making struct_ls ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/struct_ls' cp -fR ./HYPRE_*.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include cp -fR ./_hypre_struct_ls.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/struct_ls' Making sstruct_mv ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/sstruct_mv' cp -fR ./HYPRE_*.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include cp -fR ./_hypre_sstruct_mv.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/sstruct_mv' Making sstruct_ls ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/sstruct_ls' cp -fR ./HYPRE_*.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include cp -fR ./_hypre_sstruct_ls.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/sstruct_ls' Making /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/distributed_ls ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/distributed_ls' Making pilut ... gmake[2]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/distributed_ls/pilut' cp -fR ./HYPRE_*.h /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/include gmake[2]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/distributed_ls/pilut' Making ParaSails ... gmake[2]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/distributed_ls/ParaSails' gmake[2]: Nothing to be done for `all'. gmake[2]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/distributed_ls/ParaSails' Making Euclid ... gmake[2]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/distributed_ls/Euclid' gmake[2]: Nothing to be done for `all'. gmake[2]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/distributed_ls/Euclid' gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/distributed_ls' Making lib ... gmake[1]: Entering directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/lib' cp -fR libHYPRE* /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/hypre/lib gmake[1]: Leaving directory `/autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre/src/lib' Installing hypre ...********End of Output of running make on HYPRE ******* Checking for library in Download HYPRE: ['/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/lib/libHYPRE.a'] Contents: ['include', 'lib', 'bin', 'externalpackages', 'share'] ================================================================================ TEST check from config.libraries(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/libraries.py:157) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:157) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [HYPRE_IJMatrixCreate] in library ['/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/lib/libHYPRE.a'] ['liblapack.a', 'libblas.a', '/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib/pgi.ld', '-Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib', '-L/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib', '-Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib', '-L/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib', '-Wl,-rpath,/usr/lib/gcc/ppc64le-redhat-linux/4.8.5', '-L/usr/lib/gcc/ppc64le-redhat-linux/4.8.5', '-lstdc++', '-ldl', '-lpthread', '-lmpiprofilesupport', '-lmpi_ibm_usempi', '-lmpi_ibm_mpifh', '-lmpi_ibm', '-Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib', '-lpgf90rtl', '-lpgf90', '-lpgf90_rpm1', '-lpgf902', '-lpgftnrtl', '-latomic', '-lpgkomp', '-lomp', '-lomptarget', '-lpgmath', '-lpgc', '-lrt', '-lmass_simdp9', '-lmassvp9', '-lmassp9', '-lm', '-lgcc_s'] Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.libraries/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.packages.metis -I/tmp/petsc-zrcSd3/config.packages.BlasLapack -I/tmp/petsc-zrcSd3/config.packages.pthread -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.libraries -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char HYPRE_IJMatrixCreate(); static void _check_HYPRE_IJMatrixCreate() { HYPRE_IJMatrixCreate(); } int main() { _check_HYPRE_IJMatrixCreate();; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/config.libraries/conftest -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.o -Wl,-rpath,/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/lib -L/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/lib -lHYPRE -llapack -lblas /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib/pgi.ld -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib -L/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -L/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -Wl,-rpath,/usr/lib/gcc/ppc64le-redhat-linux/4.8.5 -L/usr/lib/gcc/ppc64le-redhat-linux/4.8.5 -lstdc++ -ldl -lpthread -lmpiprofilesupport -lmpi_ibm_usempi -lmpi_ibm_mpifh -lmpi_ibm -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -lpgf90rtl -lpgf90 -lpgf90_rpm1 -lpgf902 -lpgftnrtl -latomic -lpgkomp -lomp -lomptarget -lpgmath -lpgc -lrt -lmass_simdp9 -lmassvp9 -lmassp9 -lm -lgcc_s -lstdc++ -ldl Defined "HAVE_LIBHYPRE" to "1" Checking for optional headers [] in Download HYPRE: ['/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/include'] ================================================================================ TEST checkInclude from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files [] in ['/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/include'] Found header files [] in ['/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/include'] Checking for headers ['HYPRE.h'] in Download HYPRE: ['/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/include'] ================================================================================ TEST checkInclude from config.headers(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['HYPRE.h'] in ['/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/include'] Checking include with compiler flags var CPPFLAGS ['/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/include'] Preprocessing source: #include "confdefs.h" #include "conffix.h" #include Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.packages.cuda -I/tmp/petsc-zrcSd3/config.packages.metis -I/tmp/petsc-zrcSd3/config.packages.parmetis -I/tmp/petsc-zrcSd3/config.packages.pthread -I/tmp/petsc-zrcSd3/config.headers -I/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/include /tmp/petsc-zrcSd3/config.headers/conftest.c Preprocess stderr before filtering:: Preprocess stderr after filtering:: Found header files ['HYPRE.h'] in ['/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/include'] Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.packages.hypre/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.packages.metis -I/tmp/petsc-zrcSd3/config.packages.BlasLapack -I/tmp/petsc-zrcSd3/config.packages.pthread -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.packages.hypre -I/tmp/petsc-zrcSd3/config.libraries -g -fast -I/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/include /tmp/petsc-zrcSd3/config.packages.hypre/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include "HYPRE_config.h" int main() { #if !defined(HYPRE_BIGINT) && !defined(HYPRE_MIXEDINT) #error HYPRE_BIGINT or HYPRE_MIXEDINT not defined! #endif; return 0; } ================================================================================ TEST checkVersion from config.packages.hypre(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:986) TESTING: checkVersion from config.packages.hypre(config/BuildSystem/config/package.py:986) Uses self.version, self.minversion, self.maxversion, self.versionname, and self.versioninclude to determine if package has required version Preprocessing source: #include "confdefs.h" #include "conffix.h" #include "HYPRE_config.h" ;petscpkgver(HYPRE_RELEASE_VERSION); Running Executable WITHOUT threads to time it out Executing: mpicc -E -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.packages.cuda -I/tmp/petsc-zrcSd3/config.packages.metis -I/tmp/petsc-zrcSd3/config.packages.parmetis -I/tmp/petsc-zrcSd3/config.packages.pthread -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.packages.hypre -I/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/include /tmp/petsc-zrcSd3/config.packages.hypre/conftest.c For hypre need 2.14 <= 2.18.2 <= ================================================================================ TEST checkSharedLibrary from config.packages.hypre(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:920) TESTING: checkSharedLibrary from config.packages.hypre(config/BuildSystem/config/package.py:920) By default we don't care about checking if the library is shared child config.packages.hypre 110.828722 ================================================================================ TEST alternateConfigureLibrary from config.packages.Trilinos(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.Trilinos(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.Trilinos 0.000906 ================================================================================ TEST alternateConfigureLibrary from config.packages.xSDKTrilinos(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.xSDKTrilinos(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.xSDKTrilinos 0.000751 ================================================================================ TEST alternateConfigureLibrary from config.packages.mstk(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.mstk(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.mstk 0.000750 ================================================================================ TEST alternateConfigureLibrary from config.packages.amanzi(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.amanzi(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.amanzi 0.000740 ================================================================================ TEST alternateConfigureLibrary from config.packages.MFEM(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/packages/MFEM.py:146) TESTING: alternateConfigureLibrary from config.packages.MFEM(config/BuildSystem/config/packages/MFEM.py:146) Defined make rule "mfem-build" with dependencies "" and code [] Defined make rule "mfem-install" with dependencies "" and code [] child config.packages.MFEM 0.001613 ================================================================================ TEST alternateConfigureLibrary from config.packages.Chombo(/autofs/nccs-svm1_home1/adams/petsc_install/config/BuildSystem/config/package.py:924) TESTING: alternateConfigureLibrary from config.packages.Chombo(config/BuildSystem/config/package.py:924) Called if --with-packagename=0; does nothing by default child config.packages.Chombo 0.000820 ================================================================================ TEST configureRTLDDefault from PETSc.Configure(/autofs/nccs-svm1_home1/adams/petsc_install/config/PETSc/Configure.py:684) TESTING: configureRTLDDefault from PETSc.Configure(config/PETSc/Configure.py:684) All intermediate test results are stored in /tmp/petsc-zrcSd3/PETSc.Configure Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/PETSc.Configure/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.packages.metis -I/tmp/petsc-zrcSd3/config.packages.BlasLapack -I/tmp/petsc-zrcSd3/config.packages.pthread -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.packages.hypre -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/PETSc.Configure -g -fast /tmp/petsc-zrcSd3/PETSc.Configure/conftest.c Possible ERROR while running compiler: exit code 2 stderr: PGC-S-0074-Non-constant expression in initializer (/tmp/petsc-zrcSd3/PETSc.Configure/conftest.c: 4) PGC-W-0093-Type cast required for this conversion of constant (/tmp/petsc-zrcSd3/PETSc.Configure/conftest.c: 4) PGC/power Linux 19.9-0: compilation completed with severe errors Source: #include "confdefs.h" #include "conffix.h" #include void *ptr = RTLD_DEFAULT; int main() { ; return 0; } ================================================================================ TEST configurePrefetch from PETSc.Configure(/autofs/nccs-svm1_home1/adams/petsc_install/config/PETSc/Configure.py:509) TESTING: configurePrefetch from PETSc.Configure(config/PETSc/Configure.py:509) Sees if there are any prefetch functions supported Running Executable WITHOUT threads to time it out Executing: uname -s stdout: Linux Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/PETSc.Configure/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.packages.metis -I/tmp/petsc-zrcSd3/config.packages.BlasLapack -I/tmp/petsc-zrcSd3/config.packages.pthread -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.packages.hypre -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/PETSc.Configure -g -fast /tmp/petsc-zrcSd3/PETSc.Configure/conftest.c Possible ERROR while running compiler: exit code 2 stderr: PGC-F-0206-Can't find include file xmmintrin.h (/tmp/petsc-zrcSd3/PETSc.Configure/conftest.c: 3) PGC/power Linux 19.9-0: compilation aborted Source: #include "confdefs.h" #include "conffix.h" #include int main() { void *v = 0;_mm_prefetch((const char*)v,_MM_HINT_NTA); ; return 0; } Compile failed inside link Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/PETSc.Configure/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.packages.metis -I/tmp/petsc-zrcSd3/config.packages.BlasLapack -I/tmp/petsc-zrcSd3/config.packages.pthread -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.packages.hypre -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/PETSc.Configure -g -fast /tmp/petsc-zrcSd3/PETSc.Configure/conftest.c Possible ERROR while running compiler: exit code 2 stderr: PGC-F-0206-Can't find include file xmmintrin.h (/tmp/petsc-zrcSd3/PETSc.Configure/conftest.c: 3) PGC/power Linux 19.9-0: compilation aborted Source: #include "confdefs.h" #include "conffix.h" #include int main() { void *v = 0;_mm_prefetch(v,_MM_HINT_NTA); ; return 0; } Compile failed inside link Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/PETSc.Configure/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.packages.metis -I/tmp/petsc-zrcSd3/config.packages.BlasLapack -I/tmp/petsc-zrcSd3/config.packages.pthread -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.packages.hypre -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/PETSc.Configure -g -fast /tmp/petsc-zrcSd3/PETSc.Configure/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { void *v = 0;__builtin_prefetch(v,0,0); ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/PETSc.Configure/conftest -g -fast /tmp/petsc-zrcSd3/PETSc.Configure/conftest.o -lstdc++ -ldl Possible ERROR while running linker: exit code 2 stderr: /tmp/petsc-zrcSd3/PETSc.Configure/conftest.o: In function `main': /tmp/petsc-zrcSd3/PETSc.Configure/conftest.c:5: undefined reference to `__builtin_prefetch' /usr/bin/ld: link errors found, deleting executable `/tmp/petsc-zrcSd3/PETSc.Configure/conftest' Defined "Prefetch(a,b,c)" to " " ================================================================================ TEST configureUnused from PETSc.Configure(/autofs/nccs-svm1_home1/adams/petsc_install/config/PETSc/Configure.py:570) TESTING: configureUnused from PETSc.Configure(config/PETSc/Configure.py:570) Sees if __attribute((unused)) is supported Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/PETSc.Configure/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.packages.metis -I/tmp/petsc-zrcSd3/config.packages.BlasLapack -I/tmp/petsc-zrcSd3/config.packages.pthread -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.packages.hypre -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/PETSc.Configure -g -fast /tmp/petsc-zrcSd3/PETSc.Configure/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" __attribute((unused)) static int myfunc(__attribute((unused)) void *name){ return 1;} int main() { int i = 0; int j = myfunc(&i); typedef void* atype; __attribute((unused)) atype a; ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/PETSc.Configure/conftest -g -fast /tmp/petsc-zrcSd3/PETSc.Configure/conftest.o -lstdc++ -ldl Defined "UNUSED" to "__attribute((unused))" ================================================================================ TEST configureDeprecated from PETSc.Configure(/autofs/nccs-svm1_home1/adams/petsc_install/config/PETSc/Configure.py:588) TESTING: configureDeprecated from PETSc.Configure(config/PETSc/Configure.py:588) Check if __attribute((deprecated)) is supported Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/PETSc.Configure/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.packages.metis -I/tmp/petsc-zrcSd3/config.packages.BlasLapack -I/tmp/petsc-zrcSd3/config.packages.pthread -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.packages.hypre -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/PETSc.Configure -g -fast /tmp/petsc-zrcSd3/PETSc.Configure/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" __attribute((deprecated)) static int myfunc(void) { return 1;} int main() { ; return 0; } Defined "DEPRECATED_FUNCTION(why)" to "__attribute((deprecated))" Defined "DEPRECATED_TYPEDEF(why)" to "__attribute((deprecated))" Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/PETSc.Configure/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.packages.metis -I/tmp/petsc-zrcSd3/config.packages.BlasLapack -I/tmp/petsc-zrcSd3/config.packages.pthread -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.packages.hypre -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/PETSc.Configure -g -fast /tmp/petsc-zrcSd3/PETSc.Configure/conftest.c Possible ERROR while running compiler: exit code 2 stderr: PGC-S-0035-Syntax error: Recovery attempted by replacing attribute by '=' (/tmp/petsc-zrcSd3/PETSc.Configure/conftest.c: 3) PGC-S-0053-Illegal use of void type (/tmp/petsc-zrcSd3/PETSc.Configure/conftest.c: 3) PGC/power Linux 19.9-0: compilation completed with severe errors Source: #include "confdefs.h" #include "conffix.h" enum E {oldval __attribute((deprecated)), newval }; int main() { ; return 0; } Defined "DEPRECATED_ENUM(why)" to " " Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/PETSc.Configure/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.packages.metis -I/tmp/petsc-zrcSd3/config.packages.BlasLapack -I/tmp/petsc-zrcSd3/config.packages.pthread -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.packages.hypre -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/PETSc.Configure -g -fast /tmp/petsc-zrcSd3/PETSc.Configure/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #define TEST _Pragma("GCC warning "Testing _Pragma"") value int main() { ; return 0; } Defined "DEPRECATED_MACRO(why)" to "_Pragma(why)" ================================================================================ TEST configureIsatty from PETSc.Configure(/autofs/nccs-svm1_home1/adams/petsc_install/config/PETSc/Configure.py:582) TESTING: configureIsatty from PETSc.Configure(config/PETSc/Configure.py:582) Check if the Unix C function isatty() works correctly Actually just assumes it does not work correctly on batch systems Defined "USE_ISATTY" to "1" ================================================================================ TEST configureExpect from PETSc.Configure(/autofs/nccs-svm1_home1/adams/petsc_install/config/PETSc/Configure.py:637) TESTING: configureExpect from PETSc.Configure(config/PETSc/Configure.py:637) Sees if the __builtin_expect directive is supported Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/PETSc.Configure/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.packages.metis -I/tmp/petsc-zrcSd3/config.packages.BlasLapack -I/tmp/petsc-zrcSd3/config.packages.pthread -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.packages.hypre -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/PETSc.Configure -g -fast /tmp/petsc-zrcSd3/PETSc.Configure/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { if (__builtin_expect(0,1)) return 1;; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/PETSc.Configure/conftest -g -fast /tmp/petsc-zrcSd3/PETSc.Configure/conftest.o -lstdc++ -ldl Defined "HAVE_BUILTIN_EXPECT" to "1" ================================================================================ TEST configureAlign from PETSc.Configure(/autofs/nccs-svm1_home1/adams/petsc_install/config/PETSc/Configure.py:621) TESTING: configureAlign from PETSc.Configure(config/PETSc/Configure.py:621) Check if __attribute(aligned) is supported Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/PETSc.Configure/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.packages.metis -I/tmp/petsc-zrcSd3/config.packages.BlasLapack -I/tmp/petsc-zrcSd3/config.packages.pthread -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.packages.hypre -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/PETSc.Configure -g -fast /tmp/petsc-zrcSd3/PETSc.Configure/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" struct mystruct {int myint;} __attribute((aligned(16))); char assert_aligned[(sizeof(struct mystruct)==16)*2-1]; int main() { ; return 0; } Defined "ATTRIBUTEALIGNED(size)" to "__attribute((aligned(size)))" Defined "HAVE_ATTRIBUTEALIGNED" to "1" ================================================================================ TEST configureFunctionName from PETSc.Configure(/autofs/nccs-svm1_home1/adams/petsc_install/config/PETSc/Configure.py:644) TESTING: configureFunctionName from PETSc.Configure(config/PETSc/Configure.py:644) Sees if the compiler supports __func__ or a variant. Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/PETSc.Configure/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.packages.metis -I/tmp/petsc-zrcSd3/config.packages.BlasLapack -I/tmp/petsc-zrcSd3/config.packages.pthread -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.packages.hypre -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/PETSc.Configure -g -fast /tmp/petsc-zrcSd3/PETSc.Configure/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { if (__func__[0] != 'm') return 1;; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/PETSc.Configure/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.packages.metis -I/tmp/petsc-zrcSd3/config.packages.BlasLapack -I/tmp/petsc-zrcSd3/config.packages.pthread -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.packages.hypre -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/PETSc.Configure -g -fast /tmp/petsc-zrcSd3/PETSc.Configure/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { if (__func__[0] != 'm') return 1;; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/PETSc.Configure/conftest -g -fast /tmp/petsc-zrcSd3/PETSc.Configure/conftest.o -lstdc++ -ldl Defined "FUNCTION_NAME_C" to "__func__" Running Executable WITHOUT threads to time it out Executing: mpiCC -c -o /tmp/petsc-zrcSd3/PETSc.Configure/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/PETSc.Configure -g -fast -std=c++11 /tmp/petsc-zrcSd3/PETSc.Configure/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { if (__func__[0] != 'm') return 1;; return 0; } Running Executable WITHOUT threads to time it out Executing: mpiCC -c -o /tmp/petsc-zrcSd3/PETSc.Configure/conftest.o -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/PETSc.Configure -g -fast -std=c++11 /tmp/petsc-zrcSd3/PETSc.Configure/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { if (__func__[0] != 'm') return 1;; return 0; } Running Executable WITHOUT threads to time it out Executing: mpiCC -o /tmp/petsc-zrcSd3/PETSc.Configure/conftest -g -fast /tmp/petsc-zrcSd3/PETSc.Configure/conftest.o -lstdc++ -ldl Defined "FUNCTION_NAME_CXX" to "__func__" ================================================================================ TEST configureIntptrt from PETSc.Configure(/autofs/nccs-svm1_home1/adams/petsc_install/config/PETSc/Configure.py:662) TESTING: configureIntptrt from PETSc.Configure(config/PETSc/Configure.py:662) Determine what to use for uintptr_t Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/PETSc.Configure/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.packages.metis -I/tmp/petsc-zrcSd3/config.packages.BlasLapack -I/tmp/petsc-zrcSd3/config.packages.pthread -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.packages.hypre -I/tmp/petsc-zrcSd3/config.libraries -I/tmp/petsc-zrcSd3/PETSc.Configure -g -fast /tmp/petsc-zrcSd3/PETSc.Configure/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int x; uintptr_t i = (uintptr_t)&x;; return 0; } Defined "UINTPTR_T" to "uintptr_t" ================================================================================ TEST configureSolaris from PETSc.Configure(/autofs/nccs-svm1_home1/adams/petsc_install/config/PETSc/Configure.py:689) TESTING: configureSolaris from PETSc.Configure(config/PETSc/Configure.py:689) Solaris specific stuff ================================================================================ TEST configureLinux from PETSc.Configure(/autofs/nccs-svm1_home1/adams/petsc_install/config/PETSc/Configure.py:702) TESTING: configureLinux from PETSc.Configure(config/PETSc/Configure.py:702) Linux specific stuff ================================================================================ TEST configureWin32 from PETSc.Configure(/autofs/nccs-svm1_home1/adams/petsc_install/config/PETSc/Configure.py:706) TESTING: configureWin32 from PETSc.Configure(config/PETSc/Configure.py:706) Win32 non-cygwin specific stuff Checking for functions [GetComputerName] in library ['Kernel32.lib'] [] Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.libraries/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.packages.metis -I/tmp/petsc-zrcSd3/config.packages.BlasLapack -I/tmp/petsc-zrcSd3/config.packages.pthread -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.packages.hypre -I/tmp/petsc-zrcSd3/PETSc.Configure -I/tmp/petsc-zrcSd3/config.libraries -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.c Possible ERROR while running compiler: exit code 2 stderr: PGC-F-0206-Can't find include file Windows.h (/tmp/petsc-zrcSd3/config.libraries/conftest.c: 4) PGC/power Linux 19.9-0: compilation aborted Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_GetComputerName() { GetComputerName(NULL,NULL);; } int main() { _check_GetComputerName();; return 0; } Compile failed inside link Checking for functions [GetComputerName] in library ['kernel32'] [] Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.libraries/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.packages.metis -I/tmp/petsc-zrcSd3/config.packages.BlasLapack -I/tmp/petsc-zrcSd3/config.packages.pthread -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.packages.hypre -I/tmp/petsc-zrcSd3/PETSc.Configure -I/tmp/petsc-zrcSd3/config.libraries -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.c Possible ERROR while running compiler: exit code 2 stderr: PGC-F-0206-Can't find include file Windows.h (/tmp/petsc-zrcSd3/config.libraries/conftest.c: 4) PGC/power Linux 19.9-0: compilation aborted Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_GetComputerName() { GetComputerName(NULL,NULL);; } int main() { _check_GetComputerName();; return 0; } Compile failed inside link Checking for functions [GetUserName] in library ['Advapi32.lib'] [] Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.libraries/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.packages.metis -I/tmp/petsc-zrcSd3/config.packages.BlasLapack -I/tmp/petsc-zrcSd3/config.packages.pthread -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.packages.hypre -I/tmp/petsc-zrcSd3/PETSc.Configure -I/tmp/petsc-zrcSd3/config.libraries -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.c Possible ERROR while running compiler: exit code 2 stderr: PGC-F-0206-Can't find include file Windows.h (/tmp/petsc-zrcSd3/config.libraries/conftest.c: 4) PGC/power Linux 19.9-0: compilation aborted Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_GetUserName() { GetUserName(NULL,NULL);; } int main() { _check_GetUserName();; return 0; } Compile failed inside link Checking for functions [GetUserName] in library ['advapi32'] [] Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.libraries/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.packages.metis -I/tmp/petsc-zrcSd3/config.packages.BlasLapack -I/tmp/petsc-zrcSd3/config.packages.pthread -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.packages.hypre -I/tmp/petsc-zrcSd3/PETSc.Configure -I/tmp/petsc-zrcSd3/config.libraries -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.c Possible ERROR while running compiler: exit code 2 stderr: PGC-F-0206-Can't find include file Windows.h (/tmp/petsc-zrcSd3/config.libraries/conftest.c: 4) PGC/power Linux 19.9-0: compilation aborted Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_GetUserName() { GetUserName(NULL,NULL);; } int main() { _check_GetUserName();; return 0; } Compile failed inside link Checking for functions [GetDC] in library ['User32.lib'] [] Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.libraries/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.packages.metis -I/tmp/petsc-zrcSd3/config.packages.BlasLapack -I/tmp/petsc-zrcSd3/config.packages.pthread -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.packages.hypre -I/tmp/petsc-zrcSd3/PETSc.Configure -I/tmp/petsc-zrcSd3/config.libraries -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.c Possible ERROR while running compiler: exit code 2 stderr: PGC-F-0206-Can't find include file Windows.h (/tmp/petsc-zrcSd3/config.libraries/conftest.c: 4) PGC/power Linux 19.9-0: compilation aborted Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_GetDC() { GetDC(0);; } int main() { _check_GetDC();; return 0; } Compile failed inside link Checking for functions [GetDC] in library ['user32'] [] Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.libraries/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.packages.metis -I/tmp/petsc-zrcSd3/config.packages.BlasLapack -I/tmp/petsc-zrcSd3/config.packages.pthread -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.packages.hypre -I/tmp/petsc-zrcSd3/PETSc.Configure -I/tmp/petsc-zrcSd3/config.libraries -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.c Possible ERROR while running compiler: exit code 2 stderr: PGC-F-0206-Can't find include file Windows.h (/tmp/petsc-zrcSd3/config.libraries/conftest.c: 4) PGC/power Linux 19.9-0: compilation aborted Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_GetDC() { GetDC(0);; } int main() { _check_GetDC();; return 0; } Compile failed inside link Checking for functions [CreateCompatibleDC] in library ['Gdi32.lib'] [] Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.libraries/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.packages.metis -I/tmp/petsc-zrcSd3/config.packages.BlasLapack -I/tmp/petsc-zrcSd3/config.packages.pthread -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.packages.hypre -I/tmp/petsc-zrcSd3/PETSc.Configure -I/tmp/petsc-zrcSd3/config.libraries -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.c Possible ERROR while running compiler: exit code 2 stderr: PGC-F-0206-Can't find include file Windows.h (/tmp/petsc-zrcSd3/config.libraries/conftest.c: 4) PGC/power Linux 19.9-0: compilation aborted Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_CreateCompatibleDC() { CreateCompatibleDC(0);; } int main() { _check_CreateCompatibleDC();; return 0; } Compile failed inside link Checking for functions [CreateCompatibleDC] in library ['gdi32'] [] Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.libraries/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.packages.metis -I/tmp/petsc-zrcSd3/config.packages.BlasLapack -I/tmp/petsc-zrcSd3/config.packages.pthread -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.packages.hypre -I/tmp/petsc-zrcSd3/PETSc.Configure -I/tmp/petsc-zrcSd3/config.libraries -g -fast /tmp/petsc-zrcSd3/config.libraries/conftest.c Possible ERROR while running compiler: exit code 2 stderr: PGC-F-0206-Can't find include file Windows.h (/tmp/petsc-zrcSd3/config.libraries/conftest.c: 4) PGC/power Linux 19.9-0: compilation aborted Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_CreateCompatibleDC() { CreateCompatibleDC(0);; } int main() { _check_CreateCompatibleDC();; return 0; } Compile failed inside link Checking for type: int32_t Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/config.types/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.packages.metis -I/tmp/petsc-zrcSd3/config.packages.BlasLapack -I/tmp/petsc-zrcSd3/config.packages.pthread -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.packages.hypre -I/tmp/petsc-zrcSd3/PETSc.Configure -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -g -fast /tmp/petsc-zrcSd3/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #include int main() { int32_t a;; return 0; } int32_t found Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/PETSc.Configure/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.packages.metis -I/tmp/petsc-zrcSd3/config.packages.BlasLapack -I/tmp/petsc-zrcSd3/config.packages.pthread -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.packages.hypre -I/tmp/petsc-zrcSd3/PETSc.Configure -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -g -fast /tmp/petsc-zrcSd3/PETSc.Configure/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { uid_t u; ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/PETSc.Configure/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.packages.metis -I/tmp/petsc-zrcSd3/config.packages.BlasLapack -I/tmp/petsc-zrcSd3/config.packages.pthread -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.packages.hypre -I/tmp/petsc-zrcSd3/PETSc.Configure -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -g -fast /tmp/petsc-zrcSd3/PETSc.Configure/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #if defined(PETSC_HAVE_UNISTD_H) #include #endif int main() { int a=R_OK; ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/PETSc.Configure/conftest -g -fast /tmp/petsc-zrcSd3/PETSc.Configure/conftest.o -lstdc++ -ldl Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/PETSc.Configure/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.packages.metis -I/tmp/petsc-zrcSd3/config.packages.BlasLapack -I/tmp/petsc-zrcSd3/config.packages.pthread -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.packages.hypre -I/tmp/petsc-zrcSd3/PETSc.Configure -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -g -fast /tmp/petsc-zrcSd3/PETSc.Configure/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int a=0; if (S_ISDIR(a)){} ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/PETSc.Configure/conftest -g -fast /tmp/petsc-zrcSd3/PETSc.Configure/conftest.o -lstdc++ -ldl Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/PETSc.Configure/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.packages.metis -I/tmp/petsc-zrcSd3/config.packages.BlasLapack -I/tmp/petsc-zrcSd3/config.packages.pthread -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.packages.hypre -I/tmp/petsc-zrcSd3/PETSc.Configure -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -g -fast /tmp/petsc-zrcSd3/PETSc.Configure/conftest.c Possible ERROR while running compiler: exit code 2 stderr: PGC-F-0206-Can't find include file Windows.h (/tmp/petsc-zrcSd3/PETSc.Configure/conftest.c: 3) PGC/power Linux 19.9-0: compilation aborted Source: #include "confdefs.h" #include "conffix.h" #include int main() { LARGE_INTEGER a; DWORD b=a.u.HighPart; ; return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/PETSc.Configure/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.packages.metis -I/tmp/petsc-zrcSd3/config.packages.BlasLapack -I/tmp/petsc-zrcSd3/config.packages.pthread -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.packages.hypre -I/tmp/petsc-zrcSd3/PETSc.Configure -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -g -fast /tmp/petsc-zrcSd3/PETSc.Configure/conftest.c Possible ERROR while running compiler: exit code 2 stderr: PGC-F-0206-Can't find include file Windows.h (/tmp/petsc-zrcSd3/PETSc.Configure/conftest.c: 3) PGC/power Linux 19.9-0: compilation aborted Source: #include "confdefs.h" #include "conffix.h" #include #include int main() { int flags = O_BINARY;; return 0; } Defined "REPLACE_DIR_SEPARATOR" to "'\\'" Defined "DIR_SEPARATOR" to "'/'" Defined "DIR" to ""/ccs/home/adams/petsc_install"" Defined make macro "wPETSC_DIR" to "/ccs/home/adams/petsc_install" Defined "ARCH" to ""arch-summit-opt64-pgi-hypre-cuda"" ================================================================================ TEST configureCygwinBrokenPipe from PETSc.Configure(/autofs/nccs-svm1_home1/adams/petsc_install/config/PETSc/Configure.py:778) TESTING: configureCygwinBrokenPipe from PETSc.Configure(config/PETSc/Configure.py:778) Cygwin version <= 1.7.18 had issues with pipes and long commands invoked from gnu-make http://cygwin.com/ml/cygwin/2013-05/msg00340.html Running Executable WITHOUT threads to time it out Executing: uname -s stdout: Linux ================================================================================ TEST configureDefaultArch from PETSc.Configure(/autofs/nccs-svm1_home1/adams/petsc_install/config/PETSc/Configure.py:794) TESTING: configureDefaultArch from PETSc.Configure(config/PETSc/Configure.py:794) ================================================================================ TEST configureScript from PETSc.Configure(/autofs/nccs-svm1_home1/adams/petsc_install/config/PETSc/Configure.py:811) TESTING: configureScript from PETSc.Configure(config/PETSc/Configure.py:811) Output a script in the conf directory which will reproduce the configuration ================================================================================ TEST configureInstall from PETSc.Configure(/autofs/nccs-svm1_home1/adams/petsc_install/config/PETSc/Configure.py:850) TESTING: configureInstall from PETSc.Configure(config/PETSc/Configure.py:850) Setup the directories for installation Defined make rule "print_mesg_after_build" with dependencies "" and code ['-@echo "Now to check if the libraries are working do:"', '-@echo "make PETSC_DIR=${PETSC_DIR} PETSC_ARCH=${PETSC_ARCH} check"', '-@echo "========================================="'] ================================================================================ TEST configureGCOV from PETSc.Configure(/autofs/nccs-svm1_home1/adams/petsc_install/config/PETSc/Configure.py:862) TESTING: configureGCOV from PETSc.Configure(config/PETSc/Configure.py:862) ================================================================================ TEST configureAtoll from PETSc.Configure(/autofs/nccs-svm1_home1/adams/petsc_install/config/PETSc/Configure.py:565) TESTING: configureAtoll from PETSc.Configure(config/PETSc/Configure.py:565) Checks if atoll exists Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/PETSc.Configure/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.packages.metis -I/tmp/petsc-zrcSd3/config.packages.BlasLapack -I/tmp/petsc-zrcSd3/config.packages.pthread -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.packages.hypre -I/tmp/petsc-zrcSd3/PETSc.Configure -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -g -fast /tmp/petsc-zrcSd3/PETSc.Configure/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #define _POSIX_C_SOURCE 200112L #include int main() { long v = atoll("25"); return 0; } Running Executable WITHOUT threads to time it out Executing: mpicc -o /tmp/petsc-zrcSd3/PETSc.Configure/conftest -g -fast /tmp/petsc-zrcSd3/PETSc.Configure/conftest.o -lstdc++ -ldl Defined "HAVE_ATOLL" to "1" Running Executable WITHOUT threads to time it out Executing: mpicc -show stdout: pgcc -I/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/include -lpthread -L/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib -lmpiprofilesupport -lmpi_ibm Defined "MPICC_SHOW" to ""pgcc -I/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/include -lpthread -L/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib -lmpiprofilesupport -lmpi_ibm"" Defined make macro "CC_FLAGS" to " -g -fast " Defined "HAVE_CXX" to "1" Defined make macro "CXXPP_FLAGS" to " -std=c++11" Defined make macro "CXX_FLAGS" to " -g -fast -std=c++11" Defined make macro "CXX_LINKER" to "mpiCC" Defined make macro "CXX_LINKER_FLAGS" to " -g -fast" Defined make macro "CPP_FLAGS" to "" Defined make macro "PCC" to "mpicc" Defined make macro "PCC_FLAGS" to " -g -fast " Defined make macro "PCPP_FLAGS" to "" Defined make macro "PFLAGS" to "${CFLAGS}" Defined make macro "PPPFLAGS" to "${CPPFLAGS}" Defined make macro "PY_CFLAGS" to "" Defined make macro "PY_CPPFLAGS" to "" Defined make macro "CC_SUFFIX" to "o" Defined make macro "PCC_LINKER" to "mpicc" Defined make macro "PCC_LINKER_FLAGS" to " -g -fast" Defined make macro "CC_LINKER_SUFFIX" to "" Defined "HAVE_FORTRAN" to "1" Defined make macro "FPP_FLAGS" to "" Defined make macro "FC_FLAGS" to " -g -fast " Defined make macro "FC_SUFFIX" to "o" Defined make macro "FC_LINKER" to "mpif90" Defined make macro "FC_LINKER_FLAGS" to " -g -fast " Defined make macro "FC_MODULE_FLAG" to "-I" Defined make macro "FC_MODULE_OUTPUT_FLAG" to "-module " Defined make macro "CUDAC_FLAGS" to "-ccbin pgc++ -I/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/include -Wno-deprecated-gpu-targets" Defined make macro "SL_LINKER" to "mpicc" Defined make macro "SL_LINKER_FLAGS" to "${PCC_LINKER_FLAGS}" Defined make macro "SL_LINKER_SUFFIX" to "so" Defined "SLSUFFIX" to ""so"" Defined make macro "SL_LINKER_LIBS" to "${PETSC_EXTERNAL_LIB_BASIC}" Defined make macro "PETSC_LANGUAGE" to "CONLY" Defined make macro "PETSC_SCALAR" to "real" Defined make macro "PETSC_PRECISION" to "double" Running Executable WITHOUT threads to time it out Executing: CC -VV Defined "USE_SOCKET_VIEWER" to "1" Running Executable WITHOUT threads to time it out Executing: mpicc -c -o /tmp/petsc-zrcSd3/PETSc.Configure/conftest.o -I/tmp/petsc-zrcSd3/config.utilities.closure -I/tmp/petsc-zrcSd3/config.compilers -I/tmp/petsc-zrcSd3/config.compilersFortran -I/tmp/petsc-zrcSd3/config.headers -I/tmp/petsc-zrcSd3/config.utilities.cacheDetails -I/tmp/petsc-zrcSd3/config.functions -I/tmp/petsc-zrcSd3/config.utilities.featureTestMacros -I/tmp/petsc-zrcSd3/config.utilities.missing -I/tmp/petsc-zrcSd3/PETSc.options.scalarTypes -I/tmp/petsc-zrcSd3/config.packages.MPI -I/tmp/petsc-zrcSd3/config.packages.metis -I/tmp/petsc-zrcSd3/config.packages.BlasLapack -I/tmp/petsc-zrcSd3/config.packages.pthread -I/tmp/petsc-zrcSd3/config.setCompilers -I/tmp/petsc-zrcSd3/config.packages.hypre -I/tmp/petsc-zrcSd3/PETSc.Configure -I/tmp/petsc-zrcSd3/config.types -I/tmp/petsc-zrcSd3/config.libraries -g -fast /tmp/petsc-zrcSd3/PETSc.Configure/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { setsockopt(0,SOL_SOCKET,SO_REUSEADDR,0,0); return 0; } Defined "HAVE_SO_REUSEADDR" to "1" Defined "HAVE_HYPRE" to "1" Defined make macro "HYPRE_LIB" to "-Wl,-rpath,/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/lib -L/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/lib -lHYPRE" Defined make macro "HYPRE_INCLUDE" to "-I/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/include" Defined make macro "BLASLAPACK_LIB" to "-llapack -lblas" Defined make macro "BLASLAPACK_INCLUDE" to "" Defined "HAVE_PTHREAD" to "1" Defined make macro "PTHREAD_LIB" to "" Defined make macro "PTHREAD_INCLUDE" to "" Defined "HAVE_PARMETIS" to "1" Defined make macro "PARMETIS_LIB" to "-Wl,-rpath,/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/lib -L/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/lib -lparmetis" Defined make macro "PARMETIS_INCLUDE" to "-I/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/include" Defined "HAVE_METIS" to "1" Defined make macro "METIS_LIB" to "-Wl,-rpath,/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/lib -L/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/lib -lmetis" Defined make macro "METIS_INCLUDE" to "-I/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/include" Defined "HAVE_MATHLIB" to "1" Defined make macro "MATHLIB_LIB" to "" Defined make macro "MATHLIB_INCLUDE" to "" Defined "HAVE_CUDA" to "1" Defined make macro "CUDA_LIB" to "-Wl,-rpath,/sw/summit/cuda/10.1.243/lib64 -L/sw/summit/cuda/10.1.243/lib64 -lcufft -lcublas -lcudart -lcusparse -lcusolver" Defined make macro "CUDA_INCLUDE" to "-I/sw/summit/cuda/10.1.243/include" Defined "HAVE_REGEX" to "1" Defined make macro "REGEX_LIB" to "" Defined make macro "REGEX_INCLUDE" to "" Defined "HAVE_SOWING" to "1" Defined make macro "SOWING_LIB" to "" Defined make macro "SOWING_INCLUDE" to "" Defined make macro "MPI_LIB" to "" Defined make macro "MPI_INCLUDE" to "" Defined make macro "PETSC_EXTERNAL_LIB_BASIC" to "-Wl,-rpath,/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/lib -L/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/lib -Wl,-rpath,/sw/summit/cuda/10.1.243/lib64 -L/sw/summit/cuda/10.1.243/lib64 /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib/pgi.ld -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib -L/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -L/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -Wl,-rpath,/usr/lib/gcc/ppc64le-redhat-linux/4.8.5 -L/usr/lib/gcc/ppc64le-redhat-linux/4.8.5 -lHYPRE -llapack -lblas -lparmetis -lmetis -lcufft -lcublas -lcudart -lcusparse -lcusolver -lstdc++ -ldl -lpthread -lmpiprofilesupport -lmpi_ibm_usempi -lmpi_ibm_mpifh -lmpi_ibm -lpgf90rtl -lpgf90 -lpgf90_rpm1 -lpgf902 -lpgftnrtl -latomic -lpgkomp -lomp -lomptarget -lpgmath -lpgc -lrt -lmass_simdp9 -lmassvp9 -lmassp9 -lm -lgcc_s -lstdc++ -ldl" Defined make macro "PETSC_CC_INCLUDES" to "-I/ccs/home/adams/petsc_install/include -I/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/include -I/sw/summit/cuda/10.1.243/include" Defined make macro "PETSC_CC_INCLUDES_INSTALL" to "-I/ccs/home/adams/petsc_install/include -I/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/include -I/sw/summit/cuda/10.1.243/include" Defined make macro "PETSC_FC_INCLUDES" to "-I/ccs/home/adams/petsc_install/include -I/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/include -I/sw/summit/cuda/10.1.243/include" Defined make macro "PETSC_FC_INCLUDES_INSTALL" to "-I/ccs/home/adams/petsc_install/include -I/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/include -I/sw/summit/cuda/10.1.243/include" Defined "LIB_DIR" to ""/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/lib"" Defined make macro "LIBNAME" to "${INSTALL_LIB_DIR}/libpetsc.${AR_LIB_SUFFIX}" Defined make macro "SHLIBS" to "libpetsc" Defined make macro "PETSC_LIB_BASIC" to "-lpetsc" Defined make macro "PETSC_KSP_LIB_BASIC" to "-lpetsc" Defined make macro "PETSC_TS_LIB_BASIC" to "-lpetsc" Defined make macro "PETSC_TAO_LIB_BASIC" to "-lpetsc" Defined make macro "PETSC_WITH_EXTERNAL_LIB" to "-L${PETSC_DIR}/${PETSC_ARCH}/lib -Wl,-rpath,/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/lib -L/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/lib -Wl,-rpath,/sw/summit/cuda/10.1.243/lib64 -L/sw/summit/cuda/10.1.243/lib64 /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib/pgi.ld -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib -L/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -L/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -Wl,-rpath,/usr/lib/gcc/ppc64le-redhat-linux/4.8.5 -L/usr/lib/gcc/ppc64le-redhat-linux/4.8.5 -lpetsc -lHYPRE -llapack -lblas -lparmetis -lmetis -lcufft -lcublas -lcudart -lcusparse -lcusolver -lstdc++ -ldl -lpthread -lmpiprofilesupport -lmpi_ibm_usempi -lmpi_ibm_mpifh -lmpi_ibm -lpgf90rtl -lpgf90 -lpgf90_rpm1 -lpgf902 -lpgftnrtl -latomic -lpgkomp -lomp -lomptarget -lpgmath -lpgc -lrt -lmass_simdp9 -lmassvp9 -lmassp9 -lm -lgcc_s -lstdc++ -ldl" Defined "USE_SINGLE_LIBRARY" to "1" Defined make macro "PETSC_SYS_LIB" to "${C_SH_LIB_PATH} ${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_VEC_LIB" to "${C_SH_LIB_PATH} ${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_MAT_LIB" to "${C_SH_LIB_PATH} ${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_DM_LIB" to "${C_SH_LIB_PATH} ${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_KSP_LIB" to "${C_SH_LIB_PATH} ${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_SNES_LIB" to "${C_SH_LIB_PATH} ${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_TS_LIB" to "${C_SH_LIB_PATH} ${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_TAO_LIB" to "${C_SH_LIB_PATH} ${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_CHARACTERISTIC_LIB" to "${C_SH_LIB_PATH} ${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_LIB" to "${C_SH_LIB_PATH} ${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_CONTRIB" to "${C_SH_LIB_PATH} ${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "CONFIGURE_OPTIONS" to "--with-cc=mpicc --with-cxx=mpiCC --with-fc=mpif90 COPTFLAGS=\"-g -fast\" CXXOPTFLAGS=\"-g -fast\" FOPTFLAGS=\"-g -fast\" --with-ssl=0 --with-batch=0 --with-mpiexec=\"jsrun -g 1\" --with-cuda=1 --with-cudac=nvcc --with-cxx-dialect=cxx11 --download-hypre-configure-arguments=HYPRE_CUDA_SM=70 CUDAFLAGS=\"-ccbin pgc++\" --download-metis --download-parmetis --download-hypre --with-x=0 --with-64-bit-indices=1 --with-debugging=0 PETSC_ARCH=arch-summit-opt64-pgi-hypre-cuda PETSC_DIR=/ccs/home/adams/petsc_install" ================================================================================ child PETSc.Configure 10.328285 child sum 372.040561 child total 372.071196 **** arch-summit-opt64-pgi-hypre-cuda/lib/petsc/conf/petscvariables **** MPICXX_SHOW = pgc++ -I/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/include -lpthread -L/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib -lmpiprofilesupport -lmpi_ibm C_VERSION = pgcc 19.9-0 linuxpower target on Linuxpower CUDA_VERSION = nvcc: NVIDIA (R) Cuda compiler driver FC_DEFINE_FLAG = -D FC_VERSION = pgfortran 19.9-0 linuxpower target on Linuxpower MPICC_SHOW = Unavailable AR_FLAGS = cr MPIFC_SHOW = pgfortran -I/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/include -lpthread -I/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib/PGI -L/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib -lmpiprofilesupport -lmpi_ibm_usempi -lmpi_ibm_mpifh -lmpi_ibm Cxx_VERSION = pgc++ 19.9-0 linuxpower target on Linuxpower FAST_AR_FLAGS = Scq FC_MODULE_OUTPUT_FLAG = -module PETSC_LANGUAGE = CONLY FC_LINKER_FLAGS = -g -fast SL_LINKER_SUFFIX = so SL_LINKER = mpicc CC_FLAGS = -g -fast SOWING_LIB = PETSC_PRECISION = double PETSC_LIB_BASIC = -lpetsc PETSC_DM_LIB = ${C_SH_LIB_PATH} ${PETSC_WITH_EXTERNAL_LIB} FC_FLAGS = -g -fast BLASLAPACK_LIB = -llapack -lblas PETSC_MAT_LIB = ${C_SH_LIB_PATH} ${PETSC_WITH_EXTERNAL_LIB} PCC = mpicc SL_LINKER_LIBS = ${PETSC_EXTERNAL_LIB_BASIC} SHLIBS = libpetsc MATHLIB_INCLUDE = MPI_LIB = PETSC_SNES_LIB = ${C_SH_LIB_PATH} ${PETSC_WITH_EXTERNAL_LIB} REGEX_INCLUDE = PETSC_EXTERNAL_LIB_BASIC = -Wl,-rpath,/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/lib -L/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/lib -Wl,-rpath,/sw/summit/cuda/10.1.243/lib64 -L/sw/summit/cuda/10.1.243/lib64 /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib/pgi.ld -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib -L/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -L/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -Wl,-rpath,/usr/lib/gcc/ppc64le-redhat-linux/4.8.5 -L/usr/lib/gcc/ppc64le-redhat-linux/4.8.5 -lHYPRE -llapack -lblas -lparmetis -lmetis -lcufft -lcublas -lcudart -lcusparse -lcusolver -lstdc++ -ldl -lpthread -lmpiprofilesupport -lmpi_ibm_usempi -lmpi_ibm_mpifh -lmpi_ibm -lpgf90rtl -lpgf90 -lpgf90_rpm1 -lpgf902 -lpgftnrtl -latomic -lpgkomp -lomp -lomptarget -lpgmath -lpgc -lrt -lmass_simdp9 -lmassvp9 -lmassp9 -lm -lgcc_s -lstdc++ -ldl PETSC_TS_LIB = ${C_SH_LIB_PATH} ${PETSC_WITH_EXTERNAL_LIB} PY_CFLAGS = SL_LINKER_FLAGS = ${PCC_LINKER_FLAGS} PFLAGS = ${CFLAGS} PARMETIS_LIB = -Wl,-rpath,/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/lib -L/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/lib -lparmetis CC_SUFFIX = o PETSC_LIB = ${C_SH_LIB_PATH} ${PETSC_WITH_EXTERNAL_LIB} CONFIGURE_OPTIONS = --with-cc=mpicc --with-cxx=mpiCC --with-fc=mpif90 COPTFLAGS=\"-g -fast\" CXXOPTFLAGS=\"-g -fast\" FOPTFLAGS=\"-g -fast\" --with-ssl=0 --with-batch=0 --with-mpiexec=\"jsrun -g 1\" --with-cuda=1 --with-cudac=nvcc --with-cxx-dialect=cxx11 --download-hypre-configure-arguments=HYPRE_CUDA_SM=70 CUDAFLAGS=\"-ccbin pgc++\" --download-metis --download-parmetis --download-hypre --with-x=0 --with-64-bit-indices=1 --with-debugging=0 PETSC_ARCH=arch-summit-opt64-pgi-hypre-cuda PETSC_DIR=/ccs/home/adams/petsc_install PETSC_FC_INCLUDES_INSTALL = -I/ccs/home/adams/petsc_install/include -I/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/include -I/sw/summit/cuda/10.1.243/include METIS_INCLUDE = -I/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/include PETSC_CHARACTERISTIC_LIB = ${C_SH_LIB_PATH} ${PETSC_WITH_EXTERNAL_LIB} CXXPP_FLAGS = -std=c++11 HYPRE_LIB = -Wl,-rpath,/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/lib -L/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/lib -lHYPRE PETSC_SCALAR = real PETSC_FC_INCLUDES = -I/ccs/home/adams/petsc_install/include -I/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/include -I/sw/summit/cuda/10.1.243/include CPP_FLAGS = PETSC_KSP_LIB = ${C_SH_LIB_PATH} ${PETSC_WITH_EXTERNAL_LIB} PETSC_KSP_LIB_BASIC = -lpetsc FPP_FLAGS = HYPRE_INCLUDE = -I/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/include PETSC_CC_INCLUDES_INSTALL = -I/ccs/home/adams/petsc_install/include -I/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/include -I/sw/summit/cuda/10.1.243/include FC_LINKER = mpif90 PPPFLAGS = ${CPPFLAGS} PTHREAD_LIB = CXX_FLAGS = -g -fast -std=c++11 PY_CPPFLAGS = PCC_LINKER_FLAGS = -g -fast PETSC_CONTRIB = ${C_SH_LIB_PATH} ${PETSC_WITH_EXTERNAL_LIB} CXX_LINKER_FLAGS = -g -fast PCC_LINKER = mpicc PETSC_SYS_LIB = ${C_SH_LIB_PATH} ${PETSC_WITH_EXTERNAL_LIB} PCC_FLAGS = -g -fast CUDA_LIB = -Wl,-rpath,/sw/summit/cuda/10.1.243/lib64 -L/sw/summit/cuda/10.1.243/lib64 -lcufft -lcublas -lcudart -lcusparse -lcusolver PTHREAD_INCLUDE = METIS_LIB = -Wl,-rpath,/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/lib -L/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/lib -lmetis MATHLIB_LIB = CXX_LINKER = mpiCC PETSC_TAO_LIB_BASIC = -lpetsc BLASLAPACK_INCLUDE = CUDA_INCLUDE = -I/sw/summit/cuda/10.1.243/include PETSC_TS_LIB_BASIC = -lpetsc PETSC_VEC_LIB = ${C_SH_LIB_PATH} ${PETSC_WITH_EXTERNAL_LIB} CC_LINKER_SUFFIX = CUDAC_FLAGS = -ccbin pgc++ -I/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/include -Wno-deprecated-gpu-targets PARMETIS_INCLUDE = -I/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/include PCPP_FLAGS = FC_MODULE_FLAG = -I wPETSC_DIR = /ccs/home/adams/petsc_install PETSC_WITH_EXTERNAL_LIB = -L${PETSC_DIR}/${PETSC_ARCH}/lib -Wl,-rpath,/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/lib -L/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/lib -Wl,-rpath,/sw/summit/cuda/10.1.243/lib64 -L/sw/summit/cuda/10.1.243/lib64 /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib/pgi.ld -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib -L/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib -Wl,-rpath,/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -L/autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/pgi-19.9-6rlh73dtf3lmbm6v7r3fkh7tnbeq53hc/linuxpower/19.9/lib -Wl,-rpath,/usr/lib/gcc/ppc64le-redhat-linux/4.8.5 -L/usr/lib/gcc/ppc64le-redhat-linux/4.8.5 -lpetsc -lHYPRE -llapack -lblas -lparmetis -lmetis -lcufft -lcublas -lcudart -lcusparse -lcusolver -lstdc++ -ldl -lpthread -lmpiprofilesupport -lmpi_ibm_usempi -lmpi_ibm_mpifh -lmpi_ibm -lpgf90rtl -lpgf90 -lpgf90_rpm1 -lpgf902 -lpgftnrtl -latomic -lpgkomp -lomp -lomptarget -lpgmath -lpgc -lrt -lmass_simdp9 -lmassvp9 -lmassp9 -lm -lgcc_s -lstdc++ -ldl SOWING_INCLUDE = PETSC_TAO_LIB = ${C_SH_LIB_PATH} ${PETSC_WITH_EXTERNAL_LIB} MPI_INCLUDE = REGEX_LIB = PETSC_CC_INCLUDES = -I/ccs/home/adams/petsc_install/include -I/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/include -I/sw/summit/cuda/10.1.243/include FC_SUFFIX = o LIBNAME = ${INSTALL_LIB_DIR}/libpetsc.${AR_LIB_SUFFIX} SHELL = /usr/bin/sh GREP = /usr/bin/grep MV = /usr/bin/mv PYTHON = /usr/bin/python MKDIR = /usr/bin/mkdir -p SEDINPLACE = /usr/bin/sed -i M4 = /usr/bin/m4 SED = /usr/bin/sed DIFF = /usr/bin/diff -w RM = /usr/bin/rm -f CP = /usr/bin/cp CC_LINKER_SLFLAG = -Wl,-rpath, CXXPP = mpiCC -E CC = mpicc RANLIB = /usr/bin/ranlib DYNAMICLINKER = mpicc CXX = mpiCC FC = mpif90 CUDAC = nvcc FC_LINKER_SLFLAG = -Wl,-rpath, CPP = mpicc -E AR_LIB_SUFFIX = a LD_SHARED = mpicc AR = /usr/bin/ar CUDAPP = nvcc -E CLANGUAGE = C GIT = git PREFIXDIR = /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda PETSC_SCALAR_SIZE = 64 PETSC_INDEX_SIZE = 64 OMAKE_PRINTDIR = /usr/bin/gmake --print-directory MAKE_NP = 59 NPMAX = 128 MAKE = /usr/bin/gmake MAKE_PAR_OUT_FLG = OMAKE = /usr/bin/gmake --no-print-directory MAKE_LOAD = 166.4 MAKE_TEST_NP = 49 SL_LINKER_FUNCTION = -shared -Wl,-soname,$(call SONAME_FUNCTION,$(notdir $(1)),$(2)) SONAME_FUNCTION = $(1).so.$(2) BUILDSHAREDLIB = yes GDB = /usr/bin/gdb DSYMUTIL = true MPIEXEC = jsrun -g 1 CMAKE = /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/cmake-3.15.2-xit2o3iepxvqbyku77lwcugufilztu7t/bin/cmake CTEST = /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/cmake-3.15.2-xit2o3iepxvqbyku77lwcugufilztu7t/bin/ctest SYSTEMNVCC = /sw/summit/cuda/10.1.243/bin/nvcc DOCTEXT = /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/bin/doctext BIB2HTML = /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/bin/bib2html PDFLATEX = /usr/bin/pdflatex BFORT = /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/bin/bfort MAPNAMES = /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/bin/mapnames **** arch-summit-opt64-pgi-hypre-cuda/lib/petsc/conf/petscrules **** print_mesg_after_build: -@echo "Now to check if the libraries are working do:" -@echo "make PETSC_DIR=${PETSC_DIR} PETSC_ARCH=${PETSC_ARCH} check" -@echo "=========================================" libc: ${LIBNAME}(${OBJSC}) libcxx: ${LIBNAME}(${OBJSCXX}) libcu: ${LIBNAME}(${OBJSCU}) libf: ${OBJSF} -${AR} ${AR_FLAGS} ${LIBNAME} ${OBJSF} shared_arch: shared_linux mfem-build: mfem-install: hpddm-build: hpddm-install: slepc-build: slepc-install: libmesh-build: libmesh-install: mpi4py-build: mpi4py-install: petsc4py-build: petsc4py-install: **** arch-summit-opt64-pgi-hypre-cuda/include/petscconf.h **** #if !defined(INCLUDED_UNKNOWN) #define INCLUDED_UNKNOWN #define IS_COLORING_MAX USHRT_MAX #define MPIU_COLORING_VALUE MPI_UNSIGNED_SHORT #define PETSC_ARCH "arch-summit-opt64-pgi-hypre-cuda" #define PETSC_ATTRIBUTEALIGNED(size) __attribute((aligned(size))) #define PETSC_DEPRECATED_ENUM(why) #define PETSC_DEPRECATED_FUNCTION(why) __attribute((deprecated)) #define PETSC_DEPRECATED_MACRO(why) _Pragma(why) #define PETSC_DEPRECATED_TYPEDEF(why) __attribute((deprecated)) #define PETSC_DIR "/ccs/home/adams/petsc_install" #define PETSC_DIR_SEPARATOR '/' #define PETSC_FUNCTION_NAME_C __func__ #define PETSC_FUNCTION_NAME_CXX __func__ #define PETSC_HAVE_ATOLL 1 #define PETSC_HAVE_ATTRIBUTEALIGNED 1 #define PETSC_HAVE_BUILTIN_EXPECT 1 #define PETSC_HAVE_CUDA 1 #define PETSC_HAVE_CXX 1 #define PETSC_HAVE_FORTRAN 1 #define PETSC_HAVE_HYPRE 1 #define PETSC_HAVE_METIS 1 #define PETSC_HAVE_PARMETIS 1 #define PETSC_HAVE_PTHREAD 1 #define PETSC_HAVE_REGEX 1 #define PETSC_HAVE_SOWING 1 #define PETSC_HAVE_SO_REUSEADDR 1 #define PETSC_LIB_DIR "/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/lib" #define PETSC_MPICC_SHOW "pgcc -I/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/include -lpthread -L/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/lib -lmpiprofilesupport -lmpi_ibm" #define PETSC_Prefetch(a,b,c) #define PETSC_REPLACE_DIR_SEPARATOR '\\' #define PETSC_SLSUFFIX "so" #define PETSC_UINTPTR_T uintptr_t #define PETSC_UNUSED __attribute((unused)) #define PETSC_USE_ISATTY 1 #define PETSC_USE_SINGLE_LIBRARY 1 #define PETSC_USE_SOCKET_VIEWER 1 #define PETSC_CLANGUAGE_C 1 #define PETSC_HAVE_ERF 1 #define PETSC_HAVE_FENV_H 1 #define PETSC_HAVE_LOG2 1 #define PETSC_HAVE_TGAMMA 1 #define PETSC_CXX_INLINE inline #define PETSC_CXX_RESTRICT __restrict #define PETSC_C_INLINE inline #define PETSC_C_RESTRICT __restrict #define PETSC_FORTRAN_CHARLEN_T int #define PETSC_HAVE_C99 1 #define PETSC_HAVE_CXX_DIALECT_CXX11 1 #define PETSC_HAVE_FORTRAN_UNDERSCORE 1 #define PETSC_HAVE_PGF90_COMPILER 1 #define PETSC_HAVE_RTLD_GLOBAL 1 #define PETSC_HAVE_RTLD_LAZY 1 #define PETSC_HAVE_RTLD_LOCAL 1 #define PETSC_HAVE_RTLD_NOW 1 #define PETSC_HAVE_DLFCN_H 1 #define PETSC_HAVE_FCNTL_H 1 #define PETSC_HAVE_FLOAT_H 1 #define PETSC_HAVE_INTTYPES_H 1 #define PETSC_HAVE_MALLOC_H 1 #define PETSC_HAVE_NETDB_H 1 #define PETSC_HAVE_NETINET_IN_H 1 #define PETSC_HAVE_PTHREAD_H 1 #define PETSC_HAVE_PWD_H 1 #define PETSC_HAVE_SETJMP_H 1 #define PETSC_HAVE_STDINT_H 1 #define PETSC_HAVE_STRINGS_H 1 #define PETSC_HAVE_SYS_PARAM_H 1 #define PETSC_HAVE_SYS_PROCFS_H 1 #define PETSC_HAVE_SYS_RESOURCE_H 1 #define PETSC_HAVE_SYS_SOCKET_H 1 #define PETSC_HAVE_SYS_SYSINFO_H 1 #define PETSC_HAVE_SYS_TIMES_H 1 #define PETSC_HAVE_SYS_TIME_H 1 #define PETSC_HAVE_SYS_TYPES_H 1 #define PETSC_HAVE_SYS_UTSNAME_H 1 #define PETSC_HAVE_SYS_WAIT_H 1 #define PETSC_HAVE_TIME_H 1 #define PETSC_HAVE_UNISTD_H 1 #define PETSC_HAVE_ISINF 1 #define PETSC_HAVE_ISNAN 1 #define PETSC_HAVE_ISNORMAL 1 #define PETSC_USE_REAL_DOUBLE 1 #define PETSC_HAVE_C99_COMPLEX 1 #define PETSC_HAVE_CXX_COMPLEX 1 #define PETSC_HAVE_STRUCT_SIGACTION 1 #define PETSC_SIZEOF_ENUM 4 #define PETSC_SIZEOF_INT 4 #define PETSC_SIZEOF_LONG 8 #define PETSC_SIZEOF_LONG_LONG 8 #define PETSC_SIZEOF_SHORT 2 #define PETSC_SIZEOF_SIZE_T 8 #define PETSC_SIZEOF_VOID_P 8 #define PETSC_USE_VISIBILITY_C 1 #define PETSC_USE_VISIBILITY_CXX 1 #define PETSC_USE_64BIT_INDICES 1 #define PETSC_HAVE_ACCESS 1 #define PETSC_HAVE_BZERO 1 #define PETSC_HAVE_CLOCK 1 #define PETSC_HAVE_DLCLOSE 1 #define PETSC_HAVE_DLERROR 1 #define PETSC_HAVE_DLOPEN 1 #define PETSC_HAVE_DLSYM 1 #define PETSC_HAVE_DRAND48 1 #define PETSC_HAVE_FORK 1 #define PETSC_HAVE_GETCWD 1 #define PETSC_HAVE_GETDOMAINNAME 1 #define PETSC_HAVE_GETHOSTBYNAME 1 #define PETSC_HAVE_GETHOSTNAME 1 #define PETSC_HAVE_GETPAGESIZE 1 #define PETSC_HAVE_GETRUSAGE 1 #define PETSC_HAVE_GETWD 1 #define PETSC_HAVE_LSEEK 1 #define PETSC_HAVE_MEMALIGN 1 #define PETSC_HAVE_MEMMOVE 1 #define PETSC_HAVE_MMAP 1 #define PETSC_HAVE_NANOSLEEP 1 #define PETSC_HAVE_POPEN 1 #define PETSC_HAVE_RAND 1 #define PETSC_HAVE_READLINK 1 #define PETSC_HAVE_REALPATH 1 #define PETSC_HAVE_SLEEP 1 #define PETSC_HAVE_SNPRINTF 1 #define PETSC_HAVE_SOCKET 1 #define PETSC_HAVE_STRCASECMP 1 #define PETSC_HAVE_SYSINFO 1 #define PETSC_HAVE_TIME 1 #define PETSC_HAVE_UNAME 1 #define PETSC_HAVE_USLEEP 1 #define PETSC_HAVE_VA_COPY 1 #define PETSC_HAVE_VSNPRINTF 1 #define PETSC_SIGNAL_CAST #define PETSC_FORTRAN_TYPE_INITIALIZE = -2 #define PETSC_HAVE_F90_2PTR_ARG 1 #define PETSC_HAVE_FORTRAN_FLUSH 1 #define PETSC_USING_F2003 1 #define PETSC_USING_F90FREEFORM 1 #define PETSC_HAVE_DYNAMIC_LIBRARIES 1 #define PETSC_USE_SHARED_LIBRARIES 1 #define PETSC_USE_DEBUGGER "gdb" #define PETSC_VERSION_BRANCH_GIT "stefanozampini/hypre-cuda-rebased-v2" #define PETSC_VERSION_DATE_GIT "2020-02-21 11:24:19 -0600" #define PETSC_VERSION_GIT "v3.12.4-788-g752b181" #define PETSC_BLASLAPACK_UNDERSCORE 1 #define PETSC_HAVE_MPIEXEC_ENVIRONMENTAL_VARIABLE OMP #define PETSC_HAVE_MPIIO 1 #define PETSC_HAVE_MPI_COMBINER_CONTIGUOUS 1 #define PETSC_HAVE_MPI_COMBINER_DUP 1 #define PETSC_HAVE_MPI_COMBINER_NAMED 1 #define PETSC_HAVE_MPI_EXSCAN 1 #define PETSC_HAVE_MPI_F90MODULE 1 #define PETSC_HAVE_MPI_FINALIZED 1 #define PETSC_HAVE_MPI_GET_ACCUMULATE 1 #define PETSC_HAVE_MPI_GET_LIBRARY_VERSION 1 #define PETSC_HAVE_MPI_GPU_AWARE 1 #define PETSC_HAVE_MPI_IALLREDUCE 1 #define PETSC_HAVE_MPI_IBARRIER 1 #define PETSC_HAVE_MPI_INIT_THREAD 1 #define PETSC_HAVE_MPI_IN_PLACE 1 #define PETSC_HAVE_MPI_NEIGHBORHOOD_COLLECTIVES 1 #define PETSC_HAVE_MPI_NONBLOCKING_COLLECTIVES 1 #define PETSC_HAVE_MPI_ONE_SIDED 1 #define PETSC_HAVE_MPI_PROCESS_SHARED_MEMORY 1 #define PETSC_HAVE_MPI_REDUCE_LOCAL 1 #define PETSC_HAVE_MPI_REDUCE_SCATTER 1 #define PETSC_HAVE_MPI_REDUCE_SCATTER_BLOCK 1 #define PETSC_HAVE_MPI_RGET 1 #define PETSC_HAVE_MPI_TYPE_DUP 1 #define PETSC_HAVE_MPI_TYPE_GET_ENVELOPE 1 #define PETSC_HAVE_MPI_WIN_CREATE 1 #define PETSC_HAVE_OMPI_MAJOR_VERSION 10 #define PETSC_HAVE_OMPI_MINOR_VERSION 03 #define PETSC_HAVE_OMPI_RELEASE_VERSION 01 #define PETSC_HAVE_PTHREAD_BARRIER_T 1 #define PETSC_HAVE_SCHED_CPU_SET_T 1 #define PETSC_HAVE_SYS_SYSCTL_H 1 #define PETSC_Alignx(a,b) #define PETSC_IS_COLOR_VALUE_TYPE short #define PETSC_IS_COLOR_VALUE_TYPE_F integer2 #define PETSC_USE_AVX512_KERNELS 1 #define PETSC_USE_BACKWARD_LOOP 1 #define PETSC_USE_CTABLE 1 #define PETSC_USE_INFO 1 #define PETSC_USE_LOG 1 #define PETSC_USE_MALLOC_COALESCED 1 #define PETSC_MEMALIGN 16 #define PETSC_LEVEL1_DCACHE_LINESIZE 32 #define PETSC__BSD_SOURCE 1 #define PETSC__DEFAULT_SOURCE 1 #define PETSC__GNU_SOURCE 1 #define PETSC_HAVE_FORTRAN_GET_COMMAND_ARGUMENT 1 #define PETSC_USE_PROC_FOR_SIZE 1 #define PETSC_HAVE_CUDA 1 #define PETSC_PYTHON_EXE "/usr/bin/python" #endif **** arch-summit-opt64-pgi-hypre-cuda/include/petscfix.h **** #if !defined(INCLUDED_UNKNOWN) #define INCLUDED_UNKNOWN #if defined(__cplusplus) extern "C" { } #else #endif #endif **** arch-summit-opt64-pgi-hypre-cuda/include/petscpkg_version.h **** #if !defined(INCLUDED_UNKNOWN) #define INCLUDED_UNKNOWN #define PETSC_PKG_MPI_VERSION_MAJOR 3 #define PETSC_PKG_MPI_VERSION_MINOR 0 #define PETSC_PKG_MPI_VERSION_SUBMINOR 0 #define PETSC_PKG_MPI_VERSION_ PETSC_PKG_MPI_VERSION_EQ #define PETSC_PKG_MPI_VERSION_EQ(MAJOR,MINOR,SUBMINOR) \ ((PETSC_PKG_MPI_VERSION_MAJOR == (MAJOR)) && \ (PETSC_PKG_MPI_VERSION_MINOR == (MINOR)) && \ (PETSC_PKG_MPI_VERSION_SUBMINOR == (SUBMINOR))) #define PETSC_PKG_MPI_VERSION_LT(MAJOR,MINOR,SUBMINOR) \ (PETSC_PKG_MPI_VERSION_MAJOR < (MAJOR) || \ (PETSC_PKG_MPI_VERSION_MAJOR == (MAJOR) && \ (PETSC_PKG_MPI_VERSION_MINOR < (MINOR) || \ (PETSC_PKG_MPI_VERSION_MINOR == (MINOR) && \ (PETSC_PKG_MPI_VERSION_SUBMINOR < (SUBMINOR)))))) #define PETSC_PKG_MPI_VERSION_LE(MAJOR,MINOR,SUBMINOR) \ (PETSC_PKG_MPI_VERSION_LT(MAJOR,MINOR,SUBMINOR) || \ PETSC_PKG_MPI_VERSION_EQ(MAJOR,MINOR,SUBMINOR)) #define PETSC_PKG_MPI_VERSION_GT(MAJOR,MINOR,SUBMINOR) \ ( 0 == PETSC_PKG_MPI_VERSION_LE(MAJOR,MINOR,SUBMINOR)) #define PETSC_PKG_MPI_VERSION_GE(MAJOR,MINOR,SUBMINOR) \ ( 0 == PETSC_PKG_MPI_VERSION_LT(MAJOR,MINOR,SUBMINOR)) #define PETSC_PKG_HYPRE_VERSION_MAJOR 2 #define PETSC_PKG_HYPRE_VERSION_MINOR 18 #define PETSC_PKG_HYPRE_VERSION_SUBMINOR 2 #define PETSC_PKG_HYPRE_VERSION_ PETSC_PKG_HYPRE_VERSION_EQ #define PETSC_PKG_HYPRE_VERSION_EQ(MAJOR,MINOR,SUBMINOR) \ ((PETSC_PKG_HYPRE_VERSION_MAJOR == (MAJOR)) && \ (PETSC_PKG_HYPRE_VERSION_MINOR == (MINOR)) && \ (PETSC_PKG_HYPRE_VERSION_SUBMINOR == (SUBMINOR))) #define PETSC_PKG_HYPRE_VERSION_LT(MAJOR,MINOR,SUBMINOR) \ (PETSC_PKG_HYPRE_VERSION_MAJOR < (MAJOR) || \ (PETSC_PKG_HYPRE_VERSION_MAJOR == (MAJOR) && \ (PETSC_PKG_HYPRE_VERSION_MINOR < (MINOR) || \ (PETSC_PKG_HYPRE_VERSION_MINOR == (MINOR) && \ (PETSC_PKG_HYPRE_VERSION_SUBMINOR < (SUBMINOR)))))) #define PETSC_PKG_HYPRE_VERSION_LE(MAJOR,MINOR,SUBMINOR) \ (PETSC_PKG_HYPRE_VERSION_LT(MAJOR,MINOR,SUBMINOR) || \ PETSC_PKG_HYPRE_VERSION_EQ(MAJOR,MINOR,SUBMINOR)) #define PETSC_PKG_HYPRE_VERSION_GT(MAJOR,MINOR,SUBMINOR) \ ( 0 == PETSC_PKG_HYPRE_VERSION_LE(MAJOR,MINOR,SUBMINOR)) #define PETSC_PKG_HYPRE_VERSION_GE(MAJOR,MINOR,SUBMINOR) \ ( 0 == PETSC_PKG_HYPRE_VERSION_LT(MAJOR,MINOR,SUBMINOR)) #define PETSC_PKG_CUDA_VERSION_MAJOR 10 #define PETSC_PKG_CUDA_VERSION_MINOR 1 #define PETSC_PKG_CUDA_VERSION_SUBMINOR 0 #define PETSC_PKG_CUDA_VERSION_ PETSC_PKG_CUDA_VERSION_EQ #define PETSC_PKG_CUDA_VERSION_EQ(MAJOR,MINOR,SUBMINOR) \ ((PETSC_PKG_CUDA_VERSION_MAJOR == (MAJOR)) && \ (PETSC_PKG_CUDA_VERSION_MINOR == (MINOR)) && \ (PETSC_PKG_CUDA_VERSION_SUBMINOR == (SUBMINOR))) #define PETSC_PKG_CUDA_VERSION_LT(MAJOR,MINOR,SUBMINOR) \ (PETSC_PKG_CUDA_VERSION_MAJOR < (MAJOR) || \ (PETSC_PKG_CUDA_VERSION_MAJOR == (MAJOR) && \ (PETSC_PKG_CUDA_VERSION_MINOR < (MINOR) || \ (PETSC_PKG_CUDA_VERSION_MINOR == (MINOR) && \ (PETSC_PKG_CUDA_VERSION_SUBMINOR < (SUBMINOR)))))) #define PETSC_PKG_CUDA_VERSION_LE(MAJOR,MINOR,SUBMINOR) \ (PETSC_PKG_CUDA_VERSION_LT(MAJOR,MINOR,SUBMINOR) || \ PETSC_PKG_CUDA_VERSION_EQ(MAJOR,MINOR,SUBMINOR)) #define PETSC_PKG_CUDA_VERSION_GT(MAJOR,MINOR,SUBMINOR) \ ( 0 == PETSC_PKG_CUDA_VERSION_LE(MAJOR,MINOR,SUBMINOR)) #define PETSC_PKG_CUDA_VERSION_GE(MAJOR,MINOR,SUBMINOR) \ ( 0 == PETSC_PKG_CUDA_VERSION_LT(MAJOR,MINOR,SUBMINOR)) #define PETSC_PKG_METIS_VERSION_MAJOR 5 #define PETSC_PKG_METIS_VERSION_MINOR 1 #define PETSC_PKG_METIS_VERSION_SUBMINOR 0 #define PETSC_PKG_METIS_VERSION_ PETSC_PKG_METIS_VERSION_EQ #define PETSC_PKG_METIS_VERSION_EQ(MAJOR,MINOR,SUBMINOR) \ ((PETSC_PKG_METIS_VERSION_MAJOR == (MAJOR)) && \ (PETSC_PKG_METIS_VERSION_MINOR == (MINOR)) && \ (PETSC_PKG_METIS_VERSION_SUBMINOR == (SUBMINOR))) #define PETSC_PKG_METIS_VERSION_LT(MAJOR,MINOR,SUBMINOR) \ (PETSC_PKG_METIS_VERSION_MAJOR < (MAJOR) || \ (PETSC_PKG_METIS_VERSION_MAJOR == (MAJOR) && \ (PETSC_PKG_METIS_VERSION_MINOR < (MINOR) || \ (PETSC_PKG_METIS_VERSION_MINOR == (MINOR) && \ (PETSC_PKG_METIS_VERSION_SUBMINOR < (SUBMINOR)))))) #define PETSC_PKG_METIS_VERSION_LE(MAJOR,MINOR,SUBMINOR) \ (PETSC_PKG_METIS_VERSION_LT(MAJOR,MINOR,SUBMINOR) || \ PETSC_PKG_METIS_VERSION_EQ(MAJOR,MINOR,SUBMINOR)) #define PETSC_PKG_METIS_VERSION_GT(MAJOR,MINOR,SUBMINOR) \ ( 0 == PETSC_PKG_METIS_VERSION_LE(MAJOR,MINOR,SUBMINOR)) #define PETSC_PKG_METIS_VERSION_GE(MAJOR,MINOR,SUBMINOR) \ ( 0 == PETSC_PKG_METIS_VERSION_LT(MAJOR,MINOR,SUBMINOR)) #define PETSC_PKG_PARMETIS_VERSION_MAJOR 4 #define PETSC_PKG_PARMETIS_VERSION_MINOR 0 #define PETSC_PKG_PARMETIS_VERSION_SUBMINOR 3 #define PETSC_PKG_PARMETIS_VERSION_ PETSC_PKG_PARMETIS_VERSION_EQ #define PETSC_PKG_PARMETIS_VERSION_EQ(MAJOR,MINOR,SUBMINOR) \ ((PETSC_PKG_PARMETIS_VERSION_MAJOR == (MAJOR)) && \ (PETSC_PKG_PARMETIS_VERSION_MINOR == (MINOR)) && \ (PETSC_PKG_PARMETIS_VERSION_SUBMINOR == (SUBMINOR))) #define PETSC_PKG_PARMETIS_VERSION_LT(MAJOR,MINOR,SUBMINOR) \ (PETSC_PKG_PARMETIS_VERSION_MAJOR < (MAJOR) || \ (PETSC_PKG_PARMETIS_VERSION_MAJOR == (MAJOR) && \ (PETSC_PKG_PARMETIS_VERSION_MINOR < (MINOR) || \ (PETSC_PKG_PARMETIS_VERSION_MINOR == (MINOR) && \ (PETSC_PKG_PARMETIS_VERSION_SUBMINOR < (SUBMINOR)))))) #define PETSC_PKG_PARMETIS_VERSION_LE(MAJOR,MINOR,SUBMINOR) \ (PETSC_PKG_PARMETIS_VERSION_LT(MAJOR,MINOR,SUBMINOR) || \ PETSC_PKG_PARMETIS_VERSION_EQ(MAJOR,MINOR,SUBMINOR)) #define PETSC_PKG_PARMETIS_VERSION_GT(MAJOR,MINOR,SUBMINOR) \ ( 0 == PETSC_PKG_PARMETIS_VERSION_LE(MAJOR,MINOR,SUBMINOR)) #define PETSC_PKG_PARMETIS_VERSION_GE(MAJOR,MINOR,SUBMINOR) \ ( 0 == PETSC_PKG_PARMETIS_VERSION_LT(MAJOR,MINOR,SUBMINOR)) #endif Attempting to save configure hash file: arch-summit-opt64-pgi-hypre-cuda/lib/petsc/conf/configure-hash Saved configure hash file: arch-summit-opt64-pgi-hypre-cuda/lib/petsc/conf/configure-hash Configure Actions These are the actions performed by configure on the filesystem ----------------------------------------------------------------- Framework: Directory creation : Created the external packages directory: /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages RDict update : Substitutions were stored in RDict with parent None File creation : Created makefile configure header arch-summit-opt64-pgi-hypre-cuda/lib/petsc/conf/petscvariables File creation : Created makefile configure header arch-summit-opt64-pgi-hypre-cuda/lib/petsc/conf/petscrules File creation : Created configure header arch-summit-opt64-pgi-hypre-cuda/include/petscconf.h File creation : Created C specific configure header arch-summit-opt64-pgi-hypre-cuda/include/petscfix.h File creation : Created configure pkg header arch-summit-opt64-pgi-hypre-cuda/include/petscpkg_version.h SOWING: Download : Downloaded SOWING into /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.sowing Install : Installed SOWING into /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda PETSc: File creation : Generated Fortran stubs Build : Set default architecture to arch-summit-opt64-pgi-hypre-cuda in lib/petsc/conf/petscvariables File creation : Created arch-summit-opt64-pgi-hypre-cuda/lib/petsc/conf/reconfigure-arch-summit-opt64-pgi-hypre-cuda.py for automatic reconfiguration METIS: Download : Downloaded METIS into /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.metis Install : Installed METIS into /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda PARMETIS: Download : Downloaded PARMETIS into /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.parmetis Install : Installed PARMETIS into /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda HYPRE: Download : Downloaded HYPRE into /autofs/nccs-svm1_home1/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/externalpackages/git.hypre Install : Installed HYPRE into /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda Compilers: C Compiler: mpicc -g -fast Version: pgcc 19.9-0 linuxpower target on Linuxpower CUDA Compiler: nvcc -ccbin pgc++ -I/autofs/nccs-svm1_sw/summit/.swci/1-compute/opt/spack/20180914/linux-rhel7-ppc64le/pgi-19.9/spectrum-mpi-10.3.1.2-20200121-zy6l7p3w4q2ns7i2zutzng7ex3drw656/include -Wno-deprecated-gpu-targets Version: nvcc: NVIDIA (R) Cuda compiler driver C++ Compiler: mpiCC -g -fast -std=c++11 Version: pgc++ 19.9-0 linuxpower target on Linuxpower Fortran Compiler: mpif90 -g -fast Version: pgfortran 19.9-0 linuxpower target on Linuxpower Linkers: Shared linker: mpicc -shared -g -fast Dynamic linker: mpicc -shared -g -fast Libraries linked against: -lstdc++ -ldl make: Version: 3.82 /usr/bin/gmake BlasLapack: Library: -llapack -lblas Unknown if this uses OpenMP (try export OMP_NUM_THREADS=<1-4> yourprogram -log_view) uses 4 byte integers MPI: Version: 3 Mpiexec: jsrun -g 1 OMPI_VERSION: 10.03.01 pthread: cmake: Version: 3.15.2 /autofs/nccs-svm1_sw/summit/.swci/0-core/opt/spack/20180914/linux-rhel7-ppc64le/gcc-4.8.5/cmake-3.15.2-xit2o3iepxvqbyku77lwcugufilztu7t/bin/cmake hypre: Version: 2.18.2 Includes: -I/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/include Library: -Wl,-rpath,/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/lib -L/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/lib -lHYPRE cuda: Version: 10.1 Includes: -I/sw/summit/cuda/10.1.243/include Library: -Wl,-rpath,/sw/summit/cuda/10.1.243/lib64 -L/sw/summit/cuda/10.1.243/lib64 -lcufft -lcublas -lcudart -lcusparse -lcusolver metis: Version: 5.1.0 Includes: -I/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/include Library: -Wl,-rpath,/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/lib -L/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/lib -lmetis parmetis: Version: 4.0.3 Includes: -I/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/include Library: -Wl,-rpath,/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/lib -L/ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/lib -lparmetis regex: sowing: Version: 1.1.25 /ccs/home/adams/petsc_install/arch-summit-opt64-pgi-hypre-cuda/bin/bfort Language used to compile PETSc: C PETSc: PETSC_ARCH: arch-summit-opt64-pgi-hypre-cuda PETSC_DIR: /ccs/home/adams/petsc_install Scalar type: real Precision: double Integer size: 8 bytes shared libraries: enabled Memory alignment from malloc(): 16 bytes xxx=========================================================================xxx Configure stage complete. Now build PETSc libraries with: make PETSC_DIR=/ccs/home/adams/petsc_install PETSC_ARCH=arch-summit-opt64-pgi-hypre-cuda all xxx=========================================================================xxx ================================================================================ Finishing configure run at Thu, 12 Mar 2020 20:02:38 -0400 ================================================================================