Running test examples to verify correct installation Using PETSC_DIR=/people/abhy245/software/petsc and PETSC_ARCH=debug-mode-newell make[2]: [/people/abhy245/software/petsc/lib/petsc/conf/rules:280: ex19.PETSc] Error 2 (ignored) *******************Error detected during compile or link!******************* See http://www.mcs.anl.gov/petsc/documentation/faq.html /people/abhy245/software/petsc/src/snes/examples/tutorials ex19 ********************************************************************************* mpicxx -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -fstack-protector -fvisibility=hidden -g -fopenmp -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -fstack-protector -fvisibility=hidden -g -fopenmp -I/people/abhy245/software/petsc/include -I/people/abhy245/software/petsc/debug-mode-newell/include -I/share/apps/cuda/10.2/include -Wl,-rpath,/people/abhy245/software/petsc/debug-mode-newell/lib -L/people/abhy245/software/petsc/debug-mode-newell/lib -Wl,-rpath,/people/abhy245/software/petsc/debug-mode-newell/lib -L/people/abhy245/software/petsc/debug-mode-newell/lib -Wl,-rpath,/share/apps/cuda/10.2/lib64 -L/share/apps/cuda/10.2/lib64 -Wl,-rpath,/share/apps/openmpi/3.1.3/gcc/7.4.0/lib -L/share/apps/openmpi/3.1.3/gcc/7.4.0/lib -Wl,-rpath,/qfs/projects/ops/rh7p9/gcc/7.4.0/lib/gcc/powerpc64le-unknown-linux-gnu/7.4.0 -L/qfs/projects/ops/rh7p9/gcc/7.4.0/lib/gcc/powerpc64le-unknown-linux-gnu/7.4.0 -Wl,-rpath,/qfs/projects/ops/rh7p9/gcc/7.4.0/lib/gcc -L/qfs/projects/ops/rh7p9/gcc/7.4.0/lib/gcc -Wl,-rpath,/qfs/projects/ops/rh7p9/gcc/7.4.0/lib64 -L/qfs/projects/ops/rh7p9/gcc/7.4.0/lib64 -Wl,-rpath,/qfs/projects/ops/rh7p9/gcc/7.4.0/lib -L/qfs/projects/ops/rh7p9/gcc/7.4.0/lib ex19.c -lpetsc -lscalapack -lumfpack -lklu -lcholmod -lbtf -lccolamd -lcolamd -lcamd -lamd -lsuitesparseconfig -lsuperlu_dist -lflapack -lfblas -lparmetis -lmetis -lm -lX11 -lcufft -lcublas -lcudart -lcusparse -lcusolver -lstdc++ -ldl -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lgfortran -lm -lgfortran -lm -lgcc_s -lpthread -lstdc++ -ldl -o ex19 /people/abhy245/software/petsc/debug-mode-newell/lib/libpetsc.so: undefined reference to `VecGetArrayWrite_SeqCUDA' collect2: error: ld returned 1 exit status make[3]: *** [: ex19] Error 1 1,2c1,9 < lid velocity = 0.0025, prandtl # = 1., grashof # = 1. < Number of SNES iterations = 2 --- > -------------------------------------------------------------------------- > mpiexec was unable to launch the specified application as it could not access > or execute an executable: > > Executable: ./ex19 > Node: newell01 > > while attempting to start process rank 0. > -------------------------------------------------------------------------- /people/abhy245/software/petsc/src/snes/examples/tutorials Possible problem with ex19 running with superlu_dist, diffs above ========================================= make[2]: [/people/abhy245/software/petsc/lib/petsc/conf/rules:331: ex5f.PETSc] Error 2 (ignored) *******************Error detected during compile or link!******************* See http://www.mcs.anl.gov/petsc/documentation/faq.html /people/abhy245/software/petsc/src/snes/examples/tutorials ex5f ********************************************************* mpif77 -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -fopenmp -I/people/abhy245/software/petsc/include -I/people/abhy245/software/petsc/debug-mode-newell/include -I/share/apps/cuda/10.2/include -Wl,-rpath,/people/abhy245/software/petsc/debug-mode-newell/lib -L/people/abhy245/software/petsc/debug-mode-newell/lib -Wl,-rpath,/people/abhy245/software/petsc/debug-mode-newell/lib -L/people/abhy245/software/petsc/debug-mode-newell/lib -Wl,-rpath,/share/apps/cuda/10.2/lib64 -L/share/apps/cuda/10.2/lib64 -Wl,-rpath,/share/apps/openmpi/3.1.3/gcc/7.4.0/lib -L/share/apps/openmpi/3.1.3/gcc/7.4.0/lib -Wl,-rpath,/qfs/projects/ops/rh7p9/gcc/7.4.0/lib/gcc/powerpc64le-unknown-linux-gnu/7.4.0 -L/qfs/projects/ops/rh7p9/gcc/7.4.0/lib/gcc/powerpc64le-unknown-linux-gnu/7.4.0 -Wl,-rpath,/qfs/projects/ops/rh7p9/gcc/7.4.0/lib/gcc -L/qfs/projects/ops/rh7p9/gcc/7.4.0/lib/gcc -Wl,-rpath,/qfs/projects/ops/rh7p9/gcc/7.4.0/lib64 -L/qfs/projects/ops/rh7p9/gcc/7.4.0/lib64 -Wl,-rpath,/qfs/projects/ops/rh7p9/gcc/7.4.0/lib -L/qfs/projects/ops/rh7p9/gcc/7.4.0/lib ex5f.F90 -lpetsc -lscalapack -lumfpack -lklu -lcholmod -lbtf -lccolamd -lcolamd -lcamd -lamd -lsuitesparseconfig -lsuperlu_dist -lflapack -lfblas -lparmetis -lmetis -lm -lX11 -lcufft -lcublas -lcudart -lcusparse -lcusolver -lstdc++ -ldl -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lgfortran -lm -lgfortran -lm -lgcc_s -lpthread -lstdc++ -ldl -o ex5f /people/abhy245/software/petsc/debug-mode-newell/lib/libpetsc.so: undefined reference to `VecGetArrayWrite_SeqCUDA' collect2: error: ld returned 1 exit status make[3]: *** [/people/abhy245/software/petsc/lib/petsc/conf/test:16: ex5f] Error 1 Completed test examples