writing vector in hdf5 to vector.dat ... HDF5-DIAG: Error detected in HDF5 (1.10.5) MPI-process 0: #000: H5D.c line 145 in H5Dcreate2(): unable to create dataset major: Dataset minor: Unable to initialize object #001: H5Dint.c line 329 in H5D__create_named(): unable to create and link to dataset major: Dataset minor: Unable to initialize object #002: H5L.c line 1557 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1798 in H5L__create_real(): can't insert link major: Links minor: Unable to insert object #004: H5Gtraverse.c line 851 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 627 in H5G__traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1604 in H5L__link_cb(): unable to create object major: Links minor: Unable to initialize object #007: H5Oint.c line 2453 in H5O_obj_create(): unable to open object major: Object header minor: Can't open object #008: H5Doh.c line 300 in H5O__dset_create(): unable to create dataset major: Dataset minor: Unable to initialize object #009: H5Dint.c line 1274 in H5D__create(): unable to construct layout information major: Dataset minor: Unable to initialize object #010: H5Dchunk.c line 872 in H5D__chunk_construct(): unable to set chunk sizes major: Dataset minor: Bad value #011: H5Dchunk.c line 831 in H5D__chunk_set_sizes(): chunk size must be < 4GB major: Dataset minor: Unable to initialize object [0]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [0]PETSC ERROR: Error in external library [0]PETSC ERROR: Error in HDF5 call H5Dcreate2() Status -1 [0]PETSC ERROR: See https://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. [0]PETSC ERROR: Petsc Release Version 3.12.0, Sep, 29, 2019 [0]PETSC ERROR: ./ex10 on a named apsxrmd-0001 by sajid Fri Oct 11 15:23:48 2019 [0]PETSC ERROR: Configure options --prefix=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/petsc-3.12.0-dhpnwwpsdks6asnb4wjywjyms24dlmhl --with-ssl=0 --download-c2html=0 --download-sowing=0 --download-hwloc=0 CFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gcc" FFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gfortran" CXXFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/g++" --with-cc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicc --with-cxx=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicpc --with-fc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiifort --FC_LINKER_FLAGS=-lintlc --with-precision=double --with-scalar-type=complex --with-shared-libraries=1 --with-debugging=0 --with-64-bit-indices=1 COPTFLAGS= FOPTFLAGS= CXXOPTFLAGS= --with-blaslapack-lib="/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_intel_lp64.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_sequential.so /blues/gpfs/home/software/srun: Job step aborted: Waiting up to 32 seconds for job step to finish. spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_core.so /lib64/libpthread.so /lib64/libm.so /lib64/libdl.so" --with-avx-512-kernels --with-memalign=64 --with-x=0 --with-clanguage=C --with-scalapack=0 --with-metis=1 --with-metis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/metis-5.1.0-2uxjs6gihdopyqjjyapxloxmopt3fyuf --with-hdf5=1 --with-hdf5-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/hdf5-1.10.5-4l2oqer7h7evmjcweba5iym767fnvn4g --with-hypre=0 --with-parmetis=1 --with-parmetis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/parmetis-4.0.3-ilq6ip5ckg7shv5pbbqpnqoihqag4x4e --with-mumps=0 --with-trilinos=0 --with-fftw=1 --with-fftw-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/fftw-3.3.8-rfi7e56hwc7gcek5w5er3evkb7cefks2 --with-superlu_dist=0 --with-suitesparse=0 --with-zlib-include=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/include --with-zlib-lib="-L/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/lib -lz" --with-zlib=1 HDF5-DIAG: Error detected in HDF5 (1.10.5) MPI-process 1: #000: H5D.c line 145 in H5Dcreate2(): unable to create dataset major: Dataset minor: Unable to initialize object #001: H5Dint.c line 329 in H5D__create_named(): unable to create and link to dataset major: Dataset minor: Unable to initialize object #002: H5L.c line 1557 in H5L_link_object(): unable to create new link to object major: Links HDF5-DIAG: Error detected in HDF5 (1.10.5) MPI-process 2: #000: H5D.c line 145 in H5Dcreate2(): unable to create dataset major: Dataset minor: Unable to initialize object #001: H5Dint.c line 329 in H5D__create_named(): unable to create and link to dataset major: Dataset minor: Unable to initialize object #002: H5L.c line 1557 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1798 in H5L__create_real(): can't insert link major: Links minor: Unable to insert object #004: H5Gtraverse.c line 851 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 627 in H5G__traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1604 in H5L__link_cb(): unable to create object major: Links minor: Unable to initialize object #007: H5Oint.c line 2453 in H5O_obj_create(): unable to open object major: Object header minor: Can't open object #008: H5Doh.c line 300 in H5O__dset_create(): unable to create dataset major: Dataset minor: Unable to initialize object #009: H5Dint.c line 1274 in H5D__create(): unable to construct layout information major: Dataset HDF5-DIAG: Error detected in HDF5 (1.10.5) MPI-process 3: #000: H5D.c line 145 in H5Dcreate2(): unable to create dataset major: Dataset minor: Unable to initialize object #001: H5Dint.c line 329 in H5D__create_named(): unable to create and link to dataset major: Dataset minor: Unable to initialize object #002: H5L.c line 1557 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1798 in H5L__create_real(): can't insert link major: Links minor: Unable to insert object #004: H5Gtraverse.c line 851 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 627 in H5G__traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1604 in H5L__link_cb(): unable to create object major: Links minor: Unable to initialize object #007: H5Oint.c line 2453 in H5O_obj_create(): unable to open object major: Object header minor: Can't open object #008: H5Doh.c line 300 in H5O__dset_create(): unable to create dataset major: Dataset minor: Unable to initialize object #009: H5Dint.c line 1274 in H5D__create(): unable to construct layout information major: Dataset minor: Unable to initialize object #010: H5Dchunk.c line 872 in H5D__chunk_construct(): unable to set chunk sizes major: Dataset minor: Bad value #011: H5Dchunk.c line 831 in H5D__chunk_set_sizes(): chunk size must be < 4GB major: Dataset minor: Unable to initialize object HDF5-DIAG: Error detected in HDF5 (1.10.5) MPI-process 7: #000: H5D.c line 145 in H5Dcreate2(): unable to create dataset major: Dataset minor: Unable to initialize object #001: H5Dint.c line 329 in H5D__create_named(): unable to create and link to dataset major: Dataset minor: Unable to initialize object #002: H5L.c line 1557 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1798 in H5L__create_real(): can't insert link major: Links minor: Unable to insert object #004: H5Gtraverse.c line 851 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 627 in H5G__traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1604 in H5L__link_cb(): unable to create object major: Links minor: Unable to initialize object #007: H5Oint.c line 2453 in H5O_obj_create(): unable to open object major: Object header minor: Can't open object #008: H5Doh.c line 300 in H5O__dset_create(): unable to create dataset major: Dataset minor: Unable to initialize object #009: H5Dint.c line 1274 in H5D__create(): unable to construct layout information major: Dataset minor: Unable to initialize object #003: H5L.c line 1798 in H5L__create_real(): can't insert link major: Links minor: Unable to insert object #004: H5Gtraverse.c line 851 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 627 in H5G__traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1604 in H5L__link_cb(): unable to create object major: Links minor: Unable to initialize object #007: H5Oint.c line 2453 in H5O_obj_create(): unable to open object major: Object header minor: Can't open object #008: H5Doh.c line 300 in H5O__dset_create(): unable to create dataset major: Dataset minor: Unable to initialize object #009: H5Dint.c line 1274 in H5D__create(): unable to construct layout information major: Dataset minor: Unable to initialize object #010: H5Dchunk.c line 872 in H5D__chunk_construct(): unable to set chunk sizes major: Dataset minor: Bad value #011: H5Dchunk.c line 831 in H5D__chunk_set_sizes(): chunk size must be < 4GB major: Dataset minor: Unable to initialize object [1]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [1]PETSC ERROR: Error in external library [1]PETSC ERROR: Error in HDF5 call H5Dcreate2() Status -1 [1]PETSC ERROR: See https://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. [1]PETSC ERROR: Petsc Release Version 3.12.0, Sep, 29, 2019 [1]PETSC ERROR: ./ex10 on a named apsxrmd-0001 by sajid Fri Oct 11 15:23:48 2019 [1]PETSC ERROR: Configure options --prefix=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/petsc-3.12.0-dhpnwwpsdks6asnb4wjywjyms24dlmhl --with-ssl=0 --download-c2html=0 --download-sowing=0 --download-hwloc=0 CFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gcc" FFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gfortran" CXXFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/g++" --with-cc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicc --with-cxx=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicpc --with-fc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiifort --FC_LINKER_FLAGS=-lintlc --with-precision=double --with-scalar-type=complex --with-shared-libraries=1 --with-debugging=0 --with-64-bit-indices=1 COPTFLAGS= FOPTFLAGS= CXXOPTFLAGS= --with-blaslapack-lib="/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_intel_lp64.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_sequential.so /blues/gpfs/home/software/ minor: Unable to initialize object #010: H5Dchunk.c line 872 in H5D__chunk_construct(): unable to set chunk sizes major: Dataset minor: Bad value #011: H5Dchunk.c line 831 in H5D__chunk_set_sizes(): chunk size must be < 4GB major: Dataset minor: Unable to initialize object [2]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [2]PETSC ERROR: Error in external library [2]PETSC ERROR: Error in HDF5 call H5Dcreate2() Status -1 [2]PETSC ERROR: See https://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. [2]PETSC ERROR: Petsc Release Version 3.12.0, Sep, 29, 2019 [2]PETSC ERROR: ./ex10 on a named apsxrmd-0001 by sajid Fri Oct 11 15:23:48 2019 [2]PETSC ERROR: Configure options --prefix=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/petsc-3.12.0-dhpnwwpsdks6asnb4wjywjyms24dlmhl --with-ssl=0 --download-c2html=0 --download-sowing=0 --download-hwloc=0 CFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gcc" FFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gfortran" CXXFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/g++" --with-cc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicc --with-cxx=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicpc --with-fc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiifort --FC_LINKER_FLAGS=-lintlc --with-precision=double --with-scalar-type=complex --with-shared-libraries=1 --with-debugging=0 --with-64-bit-indices=1 COPTFLAGS= FOPTFLAGS= CXXOPTFLAGS= --with-blaslapack-lib="/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_intel_lp64.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_sequential.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_core.so /lib64/libpthread.so /lib64/libm.so /lib64/libdl.so" --with-avx-512-kernels --with-memalign=64 --with-x=0 --with-clanguage=C --with-scalapack=0 --with-metis=1 --with-metis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/metis-5.1.0-2uxjs6gihdopyqjjyapxloxmopt3fyuf --with-hdf5=1 --with-hdf5-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/hdf5-1.10.5-4l2oqer7h7evmjcweba5iym767fnvn4g --with-hypre=0 --with-parmetis=1 --with-parmetis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/parmetis-4.0.3-ilq6ip5ckg7shv5pbbqpnqoihqag4x4e --with-mumps=0 --with-trilinos=0 --with-fftw=1 --with-fftw-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/fftw-3.3.8-rfi7e56hwc7gcek5w5er3evkb7cefks2 --with-su[3]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [3]PETSC ERROR: Error in external library [3]PETSC ERROR: Error in HDF5 call H5Dcreate2() Status -1 [3]PETSC ERROR: See https://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. [3]PETSC ERROR: Petsc Release Version 3.12.0, Sep, 29, 2019 [3]PETSC ERROR: ./ex10 on a named apsxrmd-0001 by sajid Fri Oct 11 15:23:48 2019 [3]PETSC ERROR: Configure options --prefix=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/petsc-3.12.0-dhpnwwpsdks6asnb4wjywjyms24dlmhl --with-ssl=0 --download-c2html=0 --download-sowing=0 --download-hwloc=0 CFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gcc" FFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gfortran" CXXFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/g++" --with-cc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicc --with-cxx=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicpc --with-fc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiifort --FC_LINKER_FLAGS=-lintlc --with-precision=double --with-scalar-type=complex --with-shared-libraries=1 --with-debugging=0 --with-64-bit-indices=1 COPTFLAGS= FOPTFLAGS= CXXOPTFLAGS= --with-blaslapack-lib="/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_intel_lp64.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_sequential.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_core.so /lib64/libpthread.so /lib64/libm.so /lib64/libdl.so" --with-avx-512-kernels --with-memalign=64 --with-x=0 --with-clanguage=C --with-scalapack=0 --with-metis=1 --with-metis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/metis-5.1.0-2uxjs6gihdopyqjjyapxloxmopt3fyuf --with-hdf5=1 --with-hdf5-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/hdf5-1.10.5-4l2oqer7h7evmjcweba5iym767fnvn4g --with-hypre=0 --with-parmetis=1 --with-parmetis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/parmetis-4.0.3-ilq6ip5ckg7shv5pbbqpnqoihqag4x4e --with-mumps=0 --with-trilinos=0 --with-fftw=1 --with-fftw-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/fftw-3.3.8-rfi7e56hwc7gcek5w5er3evkb7cefks2 --with-superlu_dist=0 --with-suitesparse=0 --with-zlib-include=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/include --with-zlib-lib="-L/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/lib -lz" --with-zlib=1 [3]PETSC ERROR: #1 VecView_MPI_HDF5() line 814 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c HDF5-DIAG: Error detected in HDF5 (1.10.5) MPI-process 4: #000: H5D.c line 145 in H5Dcreate2(): unable to create dataset major: Dataset minor: Unable to initialize object #001: H5Dint.c line 329 in H5D__create_named(): unable to create and link to dataset major: Dataset minor: Unable to initialize object #002: H5L.c line 1557 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1798 in H5L__create_real(): can't insert link major: Links minor: Unable to insert object #004: H5Gtraverse.c line 851 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 627 in H5G__traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1604 in H5L__link_cb(): unable to create object major: Links minor: Unable to initialize object #007: H5Oint.c line 2453 in H5O_obj_create(): unable to open object major: Object header minor: Can't open object #008: H5Doh.c line 300 in H5O__dset_create(): unable to create dataset major: Dataset minor: Unable to initialize object #009: H5Dint.c line 1274 in H5D__create(): unable to construct layout information major: Dataset minor: Unable to initialize object #010: H5Dchunk.c line 872 in H5D__chunk_construct(): unable to set chunk sizes major: Dataset minor: Bad value #011: H5Dchunk.c line 831 in H5D__chunk_set_sizes(): chunk size must be < 4GB major: Dataset minor: Unable to initialize object [4]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [4]PETSC ERROR: Error in external library [4]PETSC ERROR: Error in HDF5 call H5Dcreate2() Status -1 [4]PETSC ERROR: See https://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. [4]PETSC ERROR: Petsc Release Version 3.12.0, Sep, 29, 2019 [4]PETSC ERROR: ./ex10 on a named apsxrmd-0001 by sajid Fri Oct 11 15:23:48 2019 [4]PETSC ERROR: Configure options --prefix=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/petsc-3.12.0-dhpnwwpsdks6asnb4wjywjyms24dlmhl --with-ssl=0 --download-c2html=0 --download-sowing=0 --download-hwloc=0 CFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gcc" FFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gfortran" CXXFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/g++" --with-cc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicc --with-cxx=/blues/gpfs/home/software/spack-0.10.1/opt/spack/liHDF5-DIAG: Error detected in HDF5 (1.10.5) MPI-process 5: #000: H5D.c line 145 in H5Dcreate2(): unable to create dataset major: Dataset minor: Unable to initialize object #001: H5Dint.c line 329 in H5D__create_named(): unable to create and link to dataset major: Dataset minor: Unable to initialize object #002: H5L.c line 1557 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1798 in H5L__create_real(): can't insert link major: Links minor: Unable to insert object #004: H5Gtraverse.c line 851 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 627 in H5G__traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1604 in H5L__link_cb(): unable to create object major: Links minor: Unable to initialize object #007: H5Oint.c line 2453 in H5O_obj_create(): unable to open object major: Object header minor: Can't open object #008: H5Doh.c line 300 in H5O__dset_create(): unable to create dataset major: Dataset minor: Unable to initialize object #009: H5Dint.c line 1274 in H5D__create(): unable to construct layout information major: Dataset minor: Unable to initialize object #010: H5Dchunk.c line 872 in H5D__chunk_construct(): unable to set chunk sizes major: Dataset minor: Bad value #011: H5Dchunk.c line 831 in H5D__chunk_set_sizes(): chunk size must be < 4GB major: Dataset minor: Unable to initialize object [5]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [5]PETSC ERROR: Error in external library [5]PETSC ERROR: Error in HDF5 call H5Dcreate2() Status -1 [5]PETSC ERROR: See https://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. [5]PETSC ERROR: Petsc Release Version 3.12.0, Sep, 29, 2019 [5]PETSC ERROR: ./ex10 on a named apsxrmd-0001 by sajid Fri Oct 11 15:23:48 2019 [5]PETSC ERROR: Configure options --prefix=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/petsc-3.12.0-dhpnwwpsdks6asnb4wjywjyms24dlmhl --with-ssl=0 --download-c2html=0 --download-sowing=0 --download-hwloc=0 CFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gcc" FFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gfortran" CXXFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/g++" --with-cc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicc --with-cxx=/blues/gpfs/home/software/spack-0.10.1/opt/spack/liHDF5-DIAG: Error detected in HDF5 (1.10.5) MPI-process 6: #000: H5D.c line 145 in H5Dcreate2(): unable to create dataset major: Dataset minor: Unable to initialize object #001: H5Dint.c line 329 in H5D__create_named(): unable to create and link to dataset major: Dataset minor: Unable to initialize object #002: H5L.c line 1557 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1798 in H5L__create_real(): can't insert link major: Links minor: Unable to insert object #004: H5Gtraverse.c line 851 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 627 in H5G__traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1604 in H5L__link_cb(): unable to create object major: Links minor: Unable to initialize object #007: H5Oint.c line 2453 in H5O_obj_create(): unable to open object major: Object header minor: Can't open object #008: H5Doh.c line 300 in H5O__dset_create(): unable to create dataset major: Dataset minor: Unable to initialize object #009: H5Dint.c line 1274 in H5D__create(): unable to construct layout information major: Dataset minor: Unable to initialize object #010: H5Dchunk.c line 872 in H5D__chunk_construct(): unable to set chunk sizes major: Dataset minor: Bad value #011: H5Dchunk.c line 831 in H5D__chunk_set_sizes(): chunk size must be < 4GB major: Dataset minor: Unable to initialize object [6]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [6]PETSC ERROR: Error in external library [6]PETSC ERROR: Error in HDF5 call H5Dcreate2() Status -1 [6]PETSC ERROR: See https://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. [6]PETSC ERROR: Petsc Release Version 3.12.0, Sep, 29, 2019 [6]PETSC ERROR: ./ex10 on a named apsxrmd-0001 by sajid Fri Oct 11 15:23:48 2019 [6]PETSC ERROR: Configure options --prefix=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/petsc-3.12.0-dhpnwwpsdks6asnb4wjywjyms24dlmhl --with-ssl=0 --download-c2html=0 --download-sowing=0 --download-hwloc=0 CFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gcc" FFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gfortran" CXXFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/g++" --with-cc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicc --with-cxx=/blues/gpfs/home/software/spack-0.10.1/opt/spack/li minor: Unable to initialize object #010: H5Dchunk.c line 872 in H5D__chunk_construct(): unable to set chunk sizes major: Dataset minor: Bad value #011: H5Dchunk.c line 831 in H5D__chunk_set_sizes(): chunk size must be < 4GB major: Dataset minor: Unable to initialize object [7]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [7]PETSC ERROR: Error in external library [7]PETSC ERROR: Error in HDF5 call H5Dcreate2() Status -1 [7]PETSC ERROR: See https://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. [7]PETSC ERROR: Petsc Release Version 3.12.0, Sep, 29, 2019 [7]PETSC ERROR: ./ex10 on a named apsxrmd-0001 by sajid Fri Oct 11 15:23:48 2019 [7]PETSC ERROR: Configure options --prefix=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/petsc-3.12.0-dhpnwwpsdks6asnb4wjywjyms24dlmhl --with-ssl=0 --download-c2html=0 --download-sowing=0 --download-hwloc=0 CFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gcc" FFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gfortran" CXXFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/g++" --with-cc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicc --with-cxx=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicpc --with-fc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiifort --FC_LINKER_FLAGS=-lintlc --with-precision=double --with-scalar-type=complex --with-shared-libraries=1 --with-debugging=0 --with-64-bit-indices=1 COPTFLAGS= FOPTFLAGS= CXXOPTFLAGS= --with-blaslapack-lib="/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_intel_lp64.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_sequential.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_core.so /lib64/libpthread.so /lib64/libm.so /lib64/libdl.so" --with-avx-512-kernels --with-memalign=64 --with-x=0 --with-clanguage=C --with-scalapack=0 --with-metis=1 --with-metis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/metis-5.1.0-2uxjs6gihdopyqjjyapxloxmopt3fyuf --with-hdf5=1 --with-hdf5-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/hdf5-1.10.5-4l2oqer7h7evmjcweba5iym767fnvn4g --with-hypre=0 --with-parmetis=1 --with-parmetis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/parmetis-4.0.3-ilq6ip5ckg7shv5pbbqpnqoihqag4x4e --with-mumps=0 --with-trilinos=0 --with-fftw=1 --with-fftw-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/fftw-3.3.8-rfi7e56hwc7gcek5w5er3evkb7cefks2 --with-suHDF5-DIAG: Error detected in HDF5 (1.10.5) MPI-process 8: #000: H5D.c line 145 in H5Dcreate2(): unable to create dataset major: Dataset minor: Unable to initialize object #001: H5Dint.c line 329 in H5D__create_named(): unable to create and link to dataset major: Dataset minor: Unable to initialize object #002: H5L.c line 1557 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1798 in H5L__create_real(): can't insert link major: Links minor: Unable to insert object #004: H5Gtraverse.c line 851 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 627 in H5G__traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1604 in H5L__link_cb(): unable to create object major: Links minor: Unable to initialize object #007: H5Oint.c line 2453 in H5O_obj_create(): unable to open object major: Object header minor: Can't open object #008: H5Doh.c line 300 in H5O__dset_create(): unable to create dataset major: Dataset minor: Unable to initialize object #009: H5Dint.c line 1274 in H5D__create(): unable to construct layout information major: Dataset minor: Unable to initialize object #010: H5Dchunk.c line 872 in H5D__chunk_construct(): unable to set chunk sizes major: Dataset minor: Bad value #011: H5Dchunk.c line 831 in H5D__chunk_set_sizes(): chunk size must be < 4GB major: Dataset minor: Unable to initialize object [8]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [8]PETSC ERROR: Error in external library [8]PETSC ERROR: Error in HDF5 call H5Dcreate2() Status -1 [8]PETSC ERROR: See https://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. [8]PETSC ERROR: Petsc Release Version 3.12.0, Sep, 29, 2019 [8]PETSC ERROR: ./ex10 on a named apsxrmd-0001 by sajid Fri Oct 11 15:23:48 2019 [8]PETSC ERROR: Configure options --prefix=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/petsc-3.12.0-dhpnwwpsdks6asnb4wjywjyms24dlmhl --with-ssl=0 --download-c2html=0 --download-sowing=0 --download-hwloc=0 CFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gcc" FFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gfortran" CXXFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/g++" --with-cc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicc --with-cxx=/blues/gpfs/home/software/spack-0.10.1/opt/spack/liHDF5-DIAG: Error detected in HDF5 (1.10.5) MPI-process 9: #000: H5D.c line 145 in H5Dcreate2(): unable to create dataset major: Dataset minor: Unable to initialize object #001: H5Dint.c line 329 in H5D__create_named(): unable to create and link to dataset major: Dataset minor: Unable to initialize object #002: H5L.c line 1557 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1798 in H5L__create_real(): can't insert link major: Links minor: Unable to insert object #004: H5Gtraverse.c line 851 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 627 in H5G__traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1604 in H5L__link_cb(): unable to create object major: Links minor: Unable to initialize object #007: H5Oint.c line 2453 in H5O_obj_create(): unable to open object major: Object header minor: Can't open object #008: H5Doh.c line 300 in H5O__dset_create(): unable to create dataset major: Dataset minor: Unable to initialize object #009: H5Dint.c line 1274 in H5D__create(): unable to construct layout information major: Dataset minor: Unable to initialize object #010: H5Dchunk.c line 872 in H5D__chunk_construct(): unable to set chunk sizes major: Dataset minor: Bad value #011: H5Dchunk.c line 831 in H5D__chunk_set_sizes(): chunk size must be < 4GB major: Dataset minor: Unable to initialize object [9]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [9]PETSC ERROR: Error in external library [9]PETSC ERROR: Error in HDF5 call H5Dcreate2() Status -1 [9]PETSC ERROR: See https://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. [9]PETSC ERROR: Petsc Release Version 3.12.0, Sep, 29, 2019 [9]PETSC ERROR: ./ex10 on a named apsxrmd-0001 by sajid Fri Oct 11 15:23:48 2019 [9]PETSC ERROR: Configure options --prefix=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/petsc-3.12.0-dhpnwwpsdks6asnb4wjywjyms24dlmhl --with-ssl=0 --download-c2html=0 --download-sowing=0 --download-hwloc=0 CFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gcc" FFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gfortran" CXXFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/g++" --with-cc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicc --with-cxx=/blues/gpfs/home/software/spack-0.10.1/opt/spack/liHDF5-DIAG: Error detected in HDF5 (1.10.5) MPI-process 10: #000: H5D.c line 145 in H5Dcreate2(): unable to create dataset major: Dataset minor: Unable to initialize object #001: H5Dint.c line 329 in H5D__create_named(): unable to create and link to dataset major: Dataset minor: Unable to initialize object #002: H5L.c line 1557 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1798 in H5L__create_real(): can't insert link major: Links minor: Unable to insert object #004: H5Gtraverse.c line 851 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 627 in H5G__traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1604 in H5L__link_cb(): unable to create object major: Links minor: Unable to initialize object #007: H5Oint.c line 2453 in H5O_obj_create(): unable to open object major: Object header minor: Can't open object #008: H5Doh.c line 300 in H5O__dset_create(): unable to create dataset major: Dataset minor: Unable to initialize object #009: H5Dint.c line 1274 in H5D__create(): unable to construct layout information major: Dataset minor: Unable to initialize object #010: H5Dchunk.c line 872 in H5D__chunk_construct(): unable to set chunk sizes major: Dataset minor: Bad value #011: H5Dchunk.c line 831 in H5D__chunk_set_sizes(): chunk size must be < 4GB major: Dataset minor: Unable to initialize object [10]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [10]PETSC ERROR: Error in external library [10]PETSC ERROR: Error in HDF5 call H5Dcreate2() Status -1 [10]PETSC ERROR: See https://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. [10]PETSC ERROR: Petsc Release Version 3.12.0, Sep, 29, 2019 [10]PETSC ERROR: ./ex10 on a named apsxrmd-0001 by sajid Fri Oct 11 15:23:48 2019 [10]PETSC ERROR: Configure options --prefix=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/petsc-3.12.0-dhpnwwpsdks6asnb4wjywjyms24dlmhl --with-ssl=0 --download-c2html=0 --download-sowing=0 --download-hwloc=0 CFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gcc" FFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gfortran" CXXFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/g++" --with-cc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicc --with-cxx=/blues/gpfs/home/software/spack-0.10.1/opt/spack/lHDF5-DIAG: Error detected in HDF5 (1.10.5) MPI-process 11: #000: H5D.c line 145 in H5Dcreate2(): unable to create dataset major: Dataset minor: Unable to initialize object #001: H5Dint.c line 329 in H5D__create_named(): unable to create and link to dataset major: Dataset minor: Unable to initialize object #002: H5L.c line 1557 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1798 in H5L__create_real(): can't insert link major: Links minor: Unable to insert object #004: H5Gtraverse.c line 851 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 627 in H5G__traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1604 in H5L__link_cb(): unable to create object major: Links minor: Unable to initialize object #007: H5Oint.c line 2453 in H5O_obj_create(): unable to open object major: Object header minor: Can't open object #008: H5Doh.c line 300 in H5O__dset_create(): unable to create dataset major: Dataset minor: Unable to initialize object #009: H5Dint.c line 1274 in H5D__create(): unable to construct layout information major: Dataset minor: Unable to initialize object #010: H5Dchunk.c line 872 in H5D__chunk_construct(): unable to set chunk sizes major: Dataset minor: Bad value #011: H5Dchunk.c line 831 in H5D__chunk_set_sizes(): chunk size must be < 4GB major: Dataset minor: Unable to initialize object [11]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [11]PETSC ERROR: Error in external library [11]PETSC ERROR: Error in HDF5 call H5Dcreate2() Status -1 [11]PETSC ERROR: See https://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. [11]PETSC ERROR: Petsc Release Version 3.12.0, Sep, 29, 2019 [11]PETSC ERROR: ./ex10 on a named apsxrmd-0001 by sajid Fri Oct 11 15:23:48 2019 [11]PETSC ERROR: Configure options --prefix=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/petsc-3.12.0-dhpnwwpsdks6asnb4wjywjyms24dlmhl --with-ssl=0 --download-c2html=0 --download-sowing=0 --download-hwloc=0 CFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gcc" FFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gfortran" CXXFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/g++" --with-cc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicc --with-cxx=/blues/gpfs/home/software/spack-0.10.1/opt/spack/lHDF5-DIAG: Error detected in HDF5 (1.10.5) MPI-process 12: #000: H5D.c line 145 in H5Dcreate2(): unable to create dataset major: Dataset minor: Unable to initialize object #001: H5Dint.c line 329 in H5D__create_named(): unable to create and link to dataset major: Dataset minor: Unable to initialize object #002: H5L.c line 1557 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1798 in H5L__create_real(): can't insert link major: Links minor: Unable to insert object #004: H5Gtraverse.c line 851 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 627 in H5G__traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1604 in H5L__link_cb(): unable to create object major: Links minor: Unable to initialize object #007: H5Oint.c line 2453 in H5O_obj_create(): unable to open object major: Object header minor: Can't open object #008: H5Doh.c line 300 in H5O__dset_create(): unable to create dataset major: Dataset minor: Unable to initialize object #009: H5Dint.c line 1274 in H5D__create(): unable to construct layout information major: Dataset minor: Unable to initialize object #010: H5Dchunk.c line 872 in H5D__chunk_construct(): unable to set chunk sizes major: Dataset minor: Bad value #011: H5Dchunk.c line 831 in H5D__chunk_set_sizes(): chunk size must be < 4GB major: Dataset minor: Unable to initialize object [12]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [12]PETSC ERROR: Error in external library [12]PETSC ERROR: Error in HDF5 call H5Dcreate2() Status -1 [12]PETSC ERROR: See https://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. [12]PETSC ERROR: Petsc Release Version 3.12.0, Sep, 29, 2019 [12]PETSC ERROR: ./ex10 on a named apsxrmd-0001 by sajid Fri Oct 11 15:23:48 2019 [12]PETSC ERROR: Configure options --prefix=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/petsc-3.12.0-dhpnwwpsdks6asnb4wjywjyms24dlmhl --with-ssl=0 --download-c2html=0 --download-sowing=0 --download-hwloc=0 CFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gcc" FFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gfortran" CXXFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/g++" --with-cc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicc --with-cxx=/blues/gpfs/home/software/spack-0.10.1/opt/spack/lHDF5-DIAG: Error detected in HDF5 (1.10.5) MPI-process 13: #000: H5D.c line 145 in H5Dcreate2(): unable to create dataset major: Dataset minor: Unable to initialize object #001: H5Dint.c line 329 in H5D__create_named(): unable to create and link to dataset major: Dataset minor: Unable to initialize object #002: H5L.c line 1557 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1798 in H5L__create_real(): can't insert link major: Links minor: Unable to insert object #004: H5Gtraverse.c line 851 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 627 in H5G__traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1604 in H5L__link_cb(): unable to create object major: Links minor: Unable to initialize object #007: H5Oint.c line 2453 in H5O_obj_create(): unable to open object major: Object header minor: Can't open object #008: H5Doh.c line 300 in H5O__dset_create(): unable to create dataset major: Dataset minor: Unable to initialize object #009: H5Dint.c line 1274 in H5D__create(): unable to construct layout information major: Dataset minor: Unable to initialize object #010: H5Dchunk.c line 872 in H5D__chunk_construct(): unable to set chunk sizes major: Dataset minor: Bad value #011: H5Dchunk.c line 831 in H5D__chunk_set_sizes(): chunk size must be < 4GB major: Dataset minor: Unable to initialize object [13]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [13]PETSC ERROR: Error in external library [13]PETSC ERROR: Error in HDF5 call H5Dcreate2() Status -1 [13]PETSC ERROR: See https://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. [13]PETSC ERROR: Petsc Release Version 3.12.0, Sep, 29, 2019 [13]PETSC ERROR: ./ex10 on a named apsxrmd-0001 by sajid Fri Oct 11 15:23:48 2019 [13]PETSC ERROR: Configure options --prefix=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/petsc-3.12.0-dhpnwwpsdks6asnb4wjywjyms24dlmhl --with-ssl=0 --download-c2html=0 --download-sowing=0 --download-hwloc=0 CFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gcc" FFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gfortran" CXXFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/g++" --with-cc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicc --with-cxx=/blues/gpfs/home/software/spack-0.10.1/opt/spack/lHDF5-DIAG: Error detected in HDF5 (1.10.5) MPI-process 14: #000: H5D.c line 145 in H5Dcreate2(): unable to create dataset major: Dataset minor: Unable to initialize object #001: H5Dint.c line 329 in H5D__create_named(): unable to create and link to dataset major: Dataset minor: Unable to initialize object #002: H5L.c line 1557 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1798 in H5L__create_real(): can't insert link major: Links minor: Unable to insert object #004: H5Gtraverse.c line 851 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 627 in H5G__traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1604 in H5L__link_cb(): unable to create object major: Links minor: Unable to initialize object #007: H5Oint.c line 2453 in H5O_obj_create(): unable to open object major: Object header minor: Can't open object #008: H5Doh.c line 300 in H5O__dset_create(): unable to create dataset major: Dataset minor: Unable to initialize object #009: H5Dint.c line 1274 in H5D__create(): unable to construct layout information major: Dataset minor: Unable to initialize object #010: H5Dchunk.c line 872 in H5D__chunk_construct(): unable to set chunk sizes major: Dataset minor: Bad value #011: H5Dchunk.c line 831 in H5D__chunk_set_sizes(): chunk size must be < 4GB major: Dataset minor: Unable to initialize object [14]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [14]PETSC ERROR: Error in external library [14]PETSC ERROR: Error in HDF5 call H5Dcreate2() Status -1 [14]PETSC ERROR: See https://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. [14]PETSC ERROR: Petsc Release Version 3.12.0, Sep, 29, 2019 [14]PETSC ERROR: ./ex10 on a named apsxrmd-0001 by sajid Fri Oct 11 15:23:48 2019 [14]PETSC ERROR: Configure options --prefix=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/petsc-3.12.0-dhpnwwpsdks6asnb4wjywjyms24dlmhl --with-ssl=0 --download-c2html=0 --download-sowing=0 --download-hwloc=0 CFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gcc" FFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gfortran" CXXFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/g++" --with-cc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicc --with-cxx=/blues/gpfs/home/software/spack-0.10.1/opt/spack/lHDF5-DIAG: Error detected in HDF5 (1.10.5) MPI-process 15: #000: H5D.c line 145 in H5Dcreate2(): unable to create dataset major: Dataset minor: Unable to initialize object #001: H5Dint.c line 329 in H5D__create_named(): unable to create and link to dataset major: Dataset minor: Unable to initialize object #002: H5L.c line 1557 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1798 in H5L__create_real(): can't insert link major: Links minor: Unable to insert object #004: H5Gtraverse.c line 851 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 627 in H5G__traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1604 in H5L__link_cb(): unable to create object major: Links minor: Unable to initialize object #007: H5Oint.c line 2453 in H5O_obj_create(): unable to open object major: Object header minor: Can't open object #008: H5Doh.c line 300 in H5O__dset_create(): unable to create dataset major: Dataset minor: Unable to initialize object #009: H5Dint.c line 1274 in H5D__create(): unable to construct layout information major: Dataset minor: Unable to initialize object #010: H5Dchunk.c line 872 in H5D__chunk_construct(): unable to set chunk sizes major: Dataset minor: Bad value #011: H5Dchunk.c line 831 in H5D__chunk_set_sizes(): chunk size must be < 4GB major: Dataset minor: Unable to initialize object [15]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [15]PETSC ERROR: Error in external library [15]PETSC ERROR: Error in HDF5 call H5Dcreate2() Status -1 [15]PETSC ERROR: See https://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. [15]PETSC ERROR: Petsc Release Version 3.12.0, Sep, 29, 2019 [15]PETSC ERROR: ./ex10 on a named apsxrmd-0001 by sajid Fri Oct 11 15:23:48 2019 [15]PETSC ERROR: Configure options --prefix=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/petsc-3.12.0-dhpnwwpsdks6asnb4wjywjyms24dlmhl --with-ssl=0 --download-c2html=0 --download-sowing=0 --download-hwloc=0 CFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gcc" FFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gfortran" CXXFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/g++" --with-cc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicc --with-cxx=/blues/gpfs/home/software/spack-0.10.1/opt/spack/lHDF5-DIAG: Error detected in HDF5 (1.10.5) MPI-process 16: #000: H5D.c line 145 in H5Dcreate2(): unable to create dataset major: Dataset minor: Unable to initialize object #001: H5Dint.c line 329 in H5D__create_named(): unable to create and link to dataset major: Dataset minor: Unable to initialize object #002: H5L.c line 1557 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1798 in H5L__create_real(): can't insert link major: Links minor: Unable to insert object #004: H5Gtraverse.c line 851 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 627 in H5G__traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1604 in H5L__link_cb(): unable to create object major: Links minor: Unable to initialize object #007: H5Oint.c line 2453 in H5O_obj_create(): unable to open object major: Object header minor: Can't open object #008: H5Doh.c line 300 in H5O__dset_create(): unable to create dataset major: Dataset minor: Unable to initialize object #009: H5Dint.c line 1274 in H5D__create(): unable to construct layout information major: Dataset minor: Unable to initialize object #010: H5Dchunk.c line 872 in H5D__chunk_construct(): unable to set chunk sizes major: Dataset minor: Bad value #011: H5Dchunk.c line 831 in H5D__chunk_set_sizes(): chunk size must be < 4GB major: Dataset minor: Unable to initialize object [16]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [16]PETSC ERROR: Error in external library [16]PETSC ERROR: Error in HDF5 call H5Dcreate2() Status -1 [16]PETSC ERROR: See https://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. [16]PETSC ERROR: Petsc Release Version 3.12.0, Sep, 29, 2019 [16]PETSC ERROR: ./ex10 on a named apsxrmd-0001 by sajid Fri Oct 11 15:23:48 2019 [16]PETSC ERROR: Configure options --prefix=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/petsc-3.12.0-dhpnwwpsdks6asnb4wjywjyms24dlmhl --with-ssl=0 --download-c2html=0 --download-sowing=0 --download-hwloc=0 CFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gcc" FFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gfortran" CXXFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/g++" --with-cc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicc --with-cxx=/blues/gpfs/home/software/spack-0.10.1/opt/spack/lHDF5-DIAG: Error detected in HDF5 (1.10.5) MPI-process 17: #000: H5D.c line 145 in H5Dcreate2(): unable to create dataset major: Dataset minor: Unable to initialize object #001: H5Dint.c line 329 in H5D__create_named(): unable to create and link to dataset major: Dataset minor: Unable to initialize object #002: H5L.c line 1557 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1798 in H5L__create_real(): can't insert link major: Links minor: Unable to insert object #004: H5Gtraverse.c line 851 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 627 in H5G__traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1604 in H5L__link_cb(): unable to create object major: Links minor: Unable to initialize object #007: H5Oint.c line 2453 in H5O_obj_create(): unable to open object major: Object header minor: Can't open object #008: H5Doh.c line 300 in H5O__dset_create(): unable to create dataset major: Dataset minor: Unable to initialize object #009: H5Dint.c line 1274 in H5D__create(): unable to construct layout information major: Dataset minor: Unable to initialize object #010: H5Dchunk.c line 872 in H5D__chunk_construct(): unable to set chunk sizes major: Dataset minor: Bad value #011: H5Dchunk.c line 831 in H5D__chunk_set_sizes(): chunk size must be < 4GB major: Dataset minor: Unable to initialize object [17]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [17]PETSC ERROR: Error in external library [17]PETSC ERROR: Error in HDF5 call H5Dcreate2() Status -1 [17]PETSC ERROR: See https://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. [17]PETSC ERROR: Petsc Release Version 3.12.0, Sep, 29, 2019 [17]PETSC ERROR: ./ex10 on a named apsxrmd-0001 by sajid Fri Oct 11 15:23:48 2019 [17]PETSC ERROR: Configure options --prefix=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/petsc-3.12.0-dhpnwwpsdks6asnb4wjywjyms24dlmhl --with-ssl=0 --download-c2html=0 --download-sowing=0 --download-hwloc=0 CFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gcc" FFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gfortran" CXXFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/g++" --with-cc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicc --with-cxx=/blues/gpfs/home/software/spack-0.10.1/opt/spack/lHDF5-DIAG: Error detected in HDF5 (1.10.5) MPI-process 18: #000: H5D.c line 145 in H5Dcreate2(): unable to create dataset major: Dataset minor: Unable to initialize object #001: H5Dint.c line 329 in H5D__create_named(): unable to create and link to dataset major: Dataset minor: Unable to initialize object #002: H5L.c line 1557 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1798 in H5L__create_real(): can't insert link major: Links minor: Unable to insert object #004: H5Gtraverse.c line 851 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 627 in H5G__traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1604 in H5L__link_cb(): unable to create object major: Links minor: Unable to initialize object #007: H5Oint.c line 2453 in H5O_obj_create(): unable to open object major: Object header minor: Can't open object #008: H5Doh.c line 300 in H5O__dset_create(): unable to create dataset major: Dataset minor: Unable to initialize object #009: H5Dint.c line 1274 in H5D__create(): unable to construct layout information major: Dataset minor: Unable to initialize object #010: H5Dchunk.c line 872 in H5D__chunk_construct(): unable to set chunk sizes major: Dataset minor: Bad value #011: H5Dchunk.c line 831 in H5D__chunk_set_sizes(): chunk size must be < 4GB major: Dataset minor: Unable to initialize object [18]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [18]PETSC ERROR: Error in external library [18]PETSC ERROR: Error in HDF5 call H5Dcreate2() Status -1 [18]PETSC ERROR: See https://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. [18]PETSC ERROR: Petsc Release Version 3.12.0, Sep, 29, 2019 [18]PETSC ERROR: ./ex10 on a named apsxrmd-0001 by sajid Fri Oct 11 15:23:48 2019 [18]PETSC ERROR: Configure options --prefix=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/petsc-3.12.0-dhpnwwpsdks6asnb4wjywjyms24dlmhl --with-ssl=0 --download-c2html=0 --download-sowing=0 --download-hwloc=0 CFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gcc" FFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gfortran" CXXFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/g++" --with-cc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicc --with-cxx=/blues/gpfs/home/software/spack-0.10.1/opt/spack/lHDF5-DIAG: Error detected in HDF5 (1.10.5) MPI-process 19: #000: H5D.c line 145 in H5Dcreate2(): unable to create dataset major: Dataset minor: Unable to initialize object #001: H5Dint.c line 329 in H5D__create_named(): unable to create and link to dataset major: Dataset minor: Unable to initialize object #002: H5L.c line 1557 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1798 in H5L__create_real(): can't insert link major: Links minor: Unable to insert object #004: H5Gtraverse.c line 851 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 627 in H5G__traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1604 in H5L__link_cb(): unable to create object major: Links minor: Unable to initialize object #007: H5Oint.c line 2453 in H5O_obj_create(): unable to open object major: Object header minor: Can't open object #008: H5Doh.c line 300 in H5O__dset_create(): unable to create dataset major: Dataset minor: Unable to initialize object #009: H5Dint.c line 1274 in H5D__create(): unable to construct layout information major: Dataset minor: Unable to initialize object #010: H5Dchunk.c line 872 in H5D__chunk_construct(): unable to set chunk sizes major: Dataset minor: Bad value #011: H5Dchunk.c line 831 in H5D__chunk_set_sizes(): chunk size must be < 4GB major: Dataset minor: Unable to initialize object [19]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [19]PETSC ERROR: Error in external library [19]PETSC ERROR: Error in HDF5 call H5Dcreate2() Status -1 [19]PETSC ERROR: See https://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. [19]PETSC ERROR: Petsc Release Version 3.12.0, Sep, 29, 2019 [19]PETSC ERROR: ./ex10 on a named apsxrmd-0001 by sajid Fri Oct 11 15:23:48 2019 [19]PETSC ERROR: Configure options --prefix=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/petsc-3.12.0-dhpnwwpsdks6asnb4wjywjyms24dlmhl --with-ssl=0 --download-c2html=0 --download-sowing=0 --download-hwloc=0 CFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gcc" FFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gfortran" CXXFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/g++" --with-cc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicc --with-cxx=/blues/gpfs/home/software/spack-0.10.1/opt/spack/lHDF5-DIAG: Error detected in HDF5 (1.10.5) MPI-process 20: #000: H5D.c line 145 in H5Dcreate2(): unable to create dataset major: Dataset minor: Unable to initialize object #001: H5Dint.c line 329 in H5D__create_named(): unable to create and link to dataset major: Dataset minor: Unable to initialize object #002: H5L.c line 1557 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1798 in H5L__create_real(): can't insert link major: Links minor: Unable to insert object #004: H5Gtraverse.c line 851 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 627 in H5G__traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1604 in H5L__link_cb(): unable to create object major: Links minor: Unable to initialize object #007: H5Oint.c line 2453 in H5O_obj_create(): unable to open object major: Object header minor: Can't open object #008: H5Doh.c line 300 in H5O__dset_create(): unable to create dataset major: Dataset minor: Unable to initialize object #009: H5Dint.c line 1274 in H5D__create(): unable to construct layout information major: Dataset minor: Unable to initialize object #010: H5Dchunk.c line 872 in H5D__chunk_construct(): unable to set chunk sizes major: Dataset minor: Bad value #011: H5Dchunk.c line 831 in H5D__chunk_set_sizes(): chunk size must be < 4GB major: Dataset minor: Unable to initialize object [20]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [20]PETSC ERROR: Error in external library [20]PETSC ERROR: Error in HDF5 call H5Dcreate2() Status -1 [20]PETSC ERROR: See https://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. [20]PETSC ERROR: Petsc Release Version 3.12.0, Sep, 29, 2019 [20]PETSC ERROR: ./ex10 on a named apsxrmd-0001 by sajid Fri Oct 11 15:23:48 2019 [20]PETSC ERROR: Configure options --prefix=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/petsc-3.12.0-dhpnwwpsdks6asnb4wjywjyms24dlmhl --with-ssl=0 --download-c2html=0 --download-sowing=0 --download-hwloc=0 CFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gcc" FFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gfortran" CXXFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/g++" --with-cc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicc --with-cxx=/blues/gpfs/home/software/spack-0.10.1/opt/spack/lHDF5-DIAG: Error detected in HDF5 (1.10.5) MPI-process 21: #000: H5D.c line 145 in H5Dcreate2(): unable to create dataset major: Dataset minor: Unable to initialize object #001: H5Dint.c line 329 in H5D__create_named(): unable to create and link to dataset major: Dataset minor: Unable to initialize object #002: H5L.c line 1557 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1798 in H5L__create_real(): can't insert link major: Links minor: Unable to insert object #004: H5Gtraverse.c line 851 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 627 in H5G__traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1604 in H5L__link_cb(): unable to create object major: Links minor: Unable to initialize object #007: H5Oint.c line 2453 in H5O_obj_create(): unable to open object major: Object header minor: Can't open object #008: H5Doh.c line 300 in H5O__dset_create(): unable to create dataset major: Dataset minor: Unable to initialize object #009: H5Dint.c line 1274 in H5D__create(): unable to construct layout information major: Dataset minor: Unable to initialize object #010: H5Dchunk.c line 872 in H5D__chunk_construct(): unable to set chunk sizes major: Dataset minor: Bad value #011: H5Dchunk.c line 831 in H5D__chunk_set_sizes(): chunk size must be < 4GB major: Dataset minor: Unable to initialize object [21]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [21]PETSC ERROR: Error in external library [21]PETSC ERROR: Error in HDF5 call H5Dcreate2() Status -1 [21]PETSC ERROR: See https://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. [21]PETSC ERROR: Petsc Release Version 3.12.0, Sep, 29, 2019 [21]PETSC ERROR: ./ex10 on a named apsxrmd-0001 by sajid Fri Oct 11 15:23:48 2019 [21]PETSC ERROR: Configure options --prefix=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/petsc-3.12.0-dhpnwwpsdks6asnb4wjywjyms24dlmhl --with-ssl=0 --download-c2html=0 --download-sowing=0 --download-hwloc=0 CFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gcc" FFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gfortran" CXXFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/g++" --with-cc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicc --with-cxx=/blues/gpfs/home/software/spack-0.10.1/opt/spack/lHDF5-DIAG: Error detected in HDF5 (1.10.5) MPI-process 22: #000: H5D.c line 145 in H5Dcreate2(): unable to create dataset major: Dataset minor: Unable to initialize object #001: H5Dint.c line 329 in H5D__create_named(): unable to create and link to dataset major: Dataset minor: Unable to initialize object #002: H5L.c line 1557 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1798 in H5L__create_real(): can't insert link major: Links minor: Unable to insert object #004: H5Gtraverse.c line 851 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 627 in H5G__traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1604 in H5L__link_cb(): unable to create object major: Links minor: Unable to initialize object #007: H5Oint.c line 2453 in H5O_obj_create(): unable to open object major: Object header minor: Can't open object #008: H5Doh.c line 300 in H5O__dset_create(): unable to create dataset major: Dataset minor: Unable to initialize object #009: H5Dint.c line 1274 in H5D__create(): unable to construct layout information major: Dataset minor: Unable to initialize object #010: H5Dchunk.c line 872 in H5D__chunk_construct(): unable to set chunk sizes major: Dataset minor: Bad value #011: H5Dchunk.c line 831 in H5D__chunk_set_sizes(): chunk size must be < 4GB major: Dataset minor: Unable to initialize object [22]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [22]PETSC ERROR: Error in external library [22]PETSC ERROR: Error in HDF5 call H5Dcreate2() Status -1 [22]PETSC ERROR: See https://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. [22]PETSC ERROR: Petsc Release Version 3.12.0, Sep, 29, 2019 [22]PETSC ERROR: ./ex10 on a named apsxrmd-0001 by sajid Fri Oct 11 15:23:48 2019 [22]PETSC ERROR: Configure options --prefix=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/petsc-3.12.0-dhpnwwpsdks6asnb4wjywjyms24dlmhl --with-ssl=0 --download-c2html=0 --download-sowing=0 --download-hwloc=0 CFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gcc" FFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gfortran" CXXFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/g++" --with-cc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicc --with-cxx=/blues/gpfs/home/software/spack-0.10.1/opt/spack/lHDF5-DIAG: Error detected in HDF5 (1.10.5) MPI-process 23: #000: H5D.c line 145 in H5Dcreate2(): unable to create dataset major: Dataset minor: Unable to initialize object #001: H5Dint.c line 329 in H5D__create_named(): unable to create and link to dataset major: Dataset minor: Unable to initialize object #002: H5L.c line 1557 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1798 in H5L__create_real(): can't insert link major: Links minor: Unable to insert object #004: H5Gtraverse.c line 851 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 627 in H5G__traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1604 in H5L__link_cb(): unable to create object major: Links minor: Unable to initialize object #007: H5Oint.c line 2453 in H5O_obj_create(): unable to open object major: Object header minor: Can't open object #008: H5Doh.c line 300 in H5O__dset_create(): unable to create dataset major: Dataset minor: Unable to initialize object #009: H5Dint.c line 1274 in H5D__create(): unable to construct layout information major: Dataset minor: Unable to initialize object #010: H5Dchunk.c line 872 in H5D__chunk_construct(): unable to set chunk sizes major: Dataset minor: Bad value #011: H5Dchunk.c line 831 in H5D__chunk_set_sizes(): chunk size must be < 4GB major: Dataset minor: Unable to initialize object [23]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [23]PETSC ERROR: Error in external library [23]PETSC ERROR: Error in HDF5 call H5Dcreate2() Status -1 [23]PETSC ERROR: See https://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. [23]PETSC ERROR: Petsc Release Version 3.12.0, Sep, 29, 2019 [23]PETSC ERROR: ./ex10 on a named apsxrmd-0001 by sajid Fri Oct 11 15:23:48 2019 [23]PETSC ERROR: Configure options --prefix=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/petsc-3.12.0-dhpnwwpsdks6asnb4wjywjyms24dlmhl --with-ssl=0 --download-c2html=0 --download-sowing=0 --download-hwloc=0 CFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gcc" FFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gfortran" CXXFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/g++" --with-cc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicc --with-cxx=/blues/gpfs/home/software/spack-0.10.1/opt/spack/lHDF5-DIAG: Error detected in HDF5 (1.10.5) MPI-process 24: #000: H5D.c line 145 in H5Dcreate2(): unable to create dataset major: Dataset minor: Unable to initialize object #001: H5Dint.c line 329 in H5D__create_named(): unable to create and link to dataset major: Dataset minor: Unable to initialize object #002: H5L.c line 1557 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1798 in H5L__create_real(): can't insert link major: Links minor: Unable to insert object #004: H5Gtraverse.c line 851 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 627 in H5G__traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1604 in H5L__link_cb(): unable to create object major: Links minor: Unable to initialize object #007: H5Oint.c line 2453 in H5O_obj_create(): unable to open object major: Object header minor: Can't open object #008: H5Doh.c line 300 in H5O__dset_create(): unable to create dataset major: Dataset minor: Unable to initialize object #009: H5Dint.c line 1274 in H5D__create(): unable to construct layout information major: Dataset minor: Unable to initialize object #010: H5Dchunk.c line 872 in H5D__chunk_construct(): unable to set chunk sizes major: Dataset minor: Bad value #011: H5Dchunk.c line 831 in H5D__chunk_set_sizes(): chunk size must be < 4GB major: Dataset minor: Unable to initialize object [24]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [24]PETSC ERROR: Error in external library [24]PETSC ERROR: Error in HDF5 call H5Dcreate2() Status -1 [24]PETSC ERROR: See https://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. [24]PETSC ERROR: Petsc Release Version 3.12.0, Sep, 29, 2019 [24]PETSC ERROR: ./ex10 on a named apsxrmd-0001 by sajid Fri Oct 11 15:23:48 2019 [24]PETSC ERROR: Configure options --prefix=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/petsc-3.12.0-dhpnwwpsdks6asnb4wjywjyms24dlmhl --with-ssl=0 --download-c2html=0 --download-sowing=0 --download-hwloc=0 CFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gcc" FFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gfortran" CXXFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/g++" --with-cc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicc --with-cxx=/blues/gpfs/home/software/spack-0.10.1/opt/spack/lHDF5-DIAG: Error detected in HDF5 (1.10.5) MPI-process 28: #000: H5D.c line 145 in H5Dcreate2(): unable to create dataset major: Dataset minor: Unable to initialize object #001: H5Dint.c line 329 in H5D__create_named(): unable to create and link to dataset major: Dataset minor: Unable to initialize object #002: H5L.c line 1557 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1798 in H5L__create_real(): can't insert link major: Links minor: Unable to insert object #004: H5Gtraverse.c line 851 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 627 in H5G__traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1604 in H5L__link_cb(): unable to create object major: Links minor: Unable to initialize object #007: H5Oint.c line 2453 in H5O_obj_create(): unable to open object major: Object header minor: Can't open object #008: H5Doh.c line 300 in H5O__dset_create(): unable to create dataset major: Dataset minor: Unable to initialize object #009: H5Dint.c line 1274 in H5D__create(): unable to construct layout information major: Dataset minor: Unable to initialize object #010: H5Dchunk.c line 872 in H5D__chunk_construct(): unable to set chunk sizes major: Dataset minor: Bad value #011: H5Dchunk.c line 831 in H5D__chunk_set_sizes(): chunk size must be < 4GB major: Dataset minor: Unable to initialize object [28]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [28]PETSC ERROR: Error in external library [28]PETSC ERROR: Error in HDF5 call H5Dcreate2() Status -1 [28]PETSC ERROR: See https://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. [28]PETSC ERROR: Petsc Release Version 3.12.0, Sep, 29, 2019 [28]PETSC ERROR: ./ex10 on a named apsxrmd-0001 by sajid Fri Oct 11 15:23:48 2019 [28]PETSC ERROR: Configure options --prefix=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/petsc-3.12.0-dhpnwwpsdks6asnb4wjywjyms24dlmhl --with-ssl=0 --download-c2html=0 --download-sowing=0 --download-hwloc=0 CFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gcc" FFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gfortran" CXXFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/g++" --with-cc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicc --with-cxx=/blues/gpfs/home/software/spack-0.10.1/opt/spack/lHDF5-DIAG: Error detected in HDF5 (1.10.5) MPI-process 32: #000: H5D.c line 145 in H5Dcreate2(): unable to create dataset major: Dataset minor: Unable to initialize object #001: H5Dint.c line 329 in H5D__create_named(): unable to create and link to dataset major: Dataset minor: Unable to initialize object #002: H5L.c line 1557 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1798 in H5L__create_real(): can't insert link major: Links minor: Unable to insert object #004: H5Gtraverse.c line 851 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 627 in H5G__traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1604 in H5L__link_cb(): unable to create object major: Links minor: Unable to initialize object #007: H5Oint.c line 2453 in H5O_obj_create(): unable to open object major: Object header minor: Can't open object #008: H5Doh.c line 300 in H5O__dset_create(): unable to create dataset major: Dataset minor: Unable to initialize object #009: H5Dint.c line 1274 in H5D__create(): unable to construct layout information major: Dataset minor: Unable to initialize object #010: H5Dchunk.c line 872 in H5D__chunk_construct(): unable to set chunk sizes major: Dataset minor: Bad value #011: H5Dchunk.c line 831 in H5D__chunk_set_sizes(): chunk size must be < 4GB major: Dataset minor: Unable to initialize object [32]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [32]PETSC ERROR: Error in external library [32]PETSC ERROR: Error in HDF5 call H5Dcreate2() Status -1 [32]PETSC ERROR: See https://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. [32]PETSC ERROR: Petsc Release Version 3.12.0, Sep, 29, 2019 [32]PETSC ERROR: ./ex10 on a named apsxrmd-0001 by sajid Fri Oct 11 15:23:48 2019 [32]PETSC ERROR: Configure options --prefix=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/petsc-3.12.0-dhpnwwpsdks6asnb4wjywjyms24dlmhl --with-ssl=0 --download-c2html=0 --download-sowing=0 --download-hwloc=0 CFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gcc" FFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gfortran" CXXFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/g++" --with-cc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicc --with-cxx=/blues/gpfs/home/software/spack-0.10.1/opt/spack/lHDF5-DIAG: Error detected in HDF5 (1.10.5) MPI-process 33: #000: H5D.c line 145 in H5Dcreate2(): unable to create dataset major: Dataset minor: Unable to initialize object #001: H5Dint.c line 329 in H5D__create_named(): unable to create and link to dataset major: Dataset minor: Unable to initialize object #002: H5L.c line 1557 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1798 in H5L__create_real(): can't insert link major: Links minor: Unable to insert object #004: H5Gtraverse.c line 851 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 627 in H5G__traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1604 in H5L__link_cb(): unable to create object major: Links minor: Unable to initialize object #007: H5Oint.c line 2453 in H5O_obj_create(): unable to open object major: Object header minor: Can't open object #008: H5Doh.c line 300 in H5O__dset_create(): unable to create dataset major: Dataset minor: Unable to initialize object #009: H5Dint.c line 1274 in H5D__create(): unable to construct layout information major: Dataset minor: Unable to initialize object #010: H5Dchunk.c line 872 in H5D__chunk_construct(): unable to set chunk sizes major: Dataset minor: Bad value #011: H5Dchunk.c line 831 in H5D__chunk_set_sizes(): chunk size must be < 4GB major: Dataset minor: Unable to initialize object [33]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [33]PETSC ERROR: Error in external library [33]PETSC ERROR: Error in HDF5 call H5Dcreate2() Status -1 [33]PETSC ERROR: See https://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. [33]PETSC ERROR: Petsc Release Version 3.12.0, Sep, 29, 2019 [33]PETSC ERROR: ./ex10 on a named apsxrmd-0001 by sajid Fri Oct 11 15:23:48 2019 [33]PETSC ERROR: Configure options --prefix=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/petsc-3.12.0-dhpnwwpsdks6asnb4wjywjyms24dlmhl --with-ssl=0 --download-c2html=0 --download-sowing=0 --download-hwloc=0 CFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gcc" FFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gfortran" CXXFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/g++" --with-cc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicc --with-cxx=/blues/gpfs/home/software/spack-0.10.1/opt/spack/lHDF5-DIAG: Error detected in HDF5 (1.10.5) MPI-process 34: #000: H5D.c line 145 in H5Dcreate2(): unable to create dataset major: Dataset minor: Unable to initialize object #001: H5Dint.c line 329 in H5D__create_named(): unable to create and link to dataset major: Dataset minor: Unable to initialize object #002: H5L.c line 1557 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1798 in H5L__create_real(): can't insert link major: Links minor: Unable to insert object #004: H5Gtraverse.c line 851 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 627 in H5G__traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1604 in H5L__link_cb(): unable to create object major: Links minor: Unable to initialize object #007: H5Oint.c line 2453 in H5O_obj_create(): unable to open object major: Object header minor: Can't open object #008: H5Doh.c line 300 in H5O__dset_create(): unable to create dataset major: Dataset minor: Unable to initialize object #009: H5Dint.c line 1274 in H5D__create(): unable to construct layout information major: Dataset minor: Unable to initialize object #010: H5Dchunk.c line 872 in H5D__chunk_construct(): unable to set chunk sizes major: Dataset minor: Bad value #011: H5Dchunk.c line 831 in H5D__chunk_set_sizes(): chunk size must be < 4GB major: Dataset minor: Unable to initialize object [34]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [34]PETSC ERROR: Error in external library [34]PETSC ERROR: Error in HDF5 call H5Dcreate2() Status -1 [34]PETSC ERROR: See https://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. [34]PETSC ERROR: Petsc Release Version 3.12.0, Sep, 29, 2019 [34]PETSC ERROR: ./ex10 on a named apsxrmd-0001 by sajid Fri Oct 11 15:23:48 2019 [34]PETSC ERROR: Configure options --prefix=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/petsc-3.12.0-dhpnwwpsdks6asnb4wjywjyms24dlmhl --with-ssl=0 --download-c2html=0 --download-sowing=0 --download-hwloc=0 CFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gcc" FFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gfortran" CXXFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/g++" --with-cc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicc --with-cxx=/blues/gpfs/home/software/spack-0.10.1/opt/spack/lHDF5-DIAG: Error detected in HDF5 (1.10.5) MPI-process 40: #000: H5D.c line 145 in H5Dcreate2(): unable to create dataset major: Dataset minor: Unable to initialize object #001: H5Dint.c line 329 in H5D__create_named(): unable to create and link to dataset major: Dataset minor: Unable to initialize object #002: H5L.c line 1557 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1798 in H5L__create_real(): can't insert link major: Links minor: Unable to insert object #004: H5Gtraverse.c line 851 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 627 in H5G__traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1604 in H5L__link_cb(): unable to create object major: Links minor: Unable to initialize object #007: H5Oint.c line 2453 in H5O_obj_create(): unable to open object major: Object header minor: Can't open object #008: H5Doh.c line 300 in H5O__dset_create(): unable to create dataset major: Dataset minor: Unable to initialize object #009: H5Dint.c line 1274 in H5D__create(): unable to construct layout information major: Dataset minor: Unable to initialize object #010: H5Dchunk.c line 872 in H5D__chunk_construct(): unable to set chunk sizes major: Dataset minor: Bad value #011: H5Dchunk.c line 831 in H5D__chunk_set_sizes(): chunk size must be < 4GB major: Dataset minor: Unable to initialize object [40]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [40]PETSC ERROR: Error in external library [40]PETSC ERROR: Error in HDF5 call H5Dcreate2() Status -1 [40]PETSC ERROR: See https://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. [40]PETSC ERROR: Petsc Release Version 3.12.0, Sep, 29, 2019 [40]PETSC ERROR: ./ex10 on a named apsxrmd-0001 by sajid Fri Oct 11 15:23:48 2019 [40]PETSC ERROR: Configure options --prefix=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/petsc-3.12.0-dhpnwwpsdks6asnb4wjywjyms24dlmhl --with-ssl=0 --download-c2html=0 --download-sowing=0 --download-hwloc=0 CFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gcc" FFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gfortran" CXXFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/g++" --with-cc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicc --with-cxx=/blues/gpfs/home/software/spack-0.10.1/opt/spack/lHDF5-DIAG: Error detected in HDF5 (1.10.5) MPI-process 42: #000: H5D.c line 145 in H5Dcreate2(): unable to create dataset major: Dataset minor: Unable to initialize object #001: H5Dint.c line 329 in H5D__create_named(): unable to create and link to dataset major: Dataset minor: Unable to initialize object #002: H5L.c line 1557 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1798 in H5L__create_real(): can't insert link major: Links minor: Unable to insert object #004: H5Gtraverse.c line 851 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 627 in H5G__traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1604 in H5L__link_cb(): unable to create object major: Links minor: Unable to initialize object #007: H5Oint.c line 2453 in H5O_obj_create(): unable to open object major: Object header minor: Can't open object #008: H5Doh.c line 300 in H5O__dset_create(): unable to create dataset major: Dataset minor: Unable to initialize object #009: H5Dint.c line 1274 in H5D__create(): unable to construct layout information major: Dataset minor: Unable to initialize object #010: H5Dchunk.c line 872 in H5D__chunk_construct(): unable to set chunk sizes major: Dataset minor: Bad value #011: H5Dchunk.c line 831 in H5D__chunk_set_sizes(): chunk size must be < 4GB major: Dataset minor: Unable to initialize object [42]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [42]PETSC ERROR: Error in external library [42]PETSC ERROR: Error in HDF5 call H5Dcreate2() Status -1 [42]PETSC ERROR: See https://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. [42]PETSC ERROR: Petsc Release Version 3.12.0, Sep, 29, 2019 [42]PETSC ERROR: ./ex10 on a named apsxrmd-0001 by sajid Fri Oct 11 15:23:48 2019 [42]PETSC ERROR: Configure options --prefix=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/petsc-3.12.0-dhpnwwpsdks6asnb4wjywjyms24dlmhl --with-ssl=0 --download-c2html=0 --download-sowing=0 --download-hwloc=0 CFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gcc" FFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gfortran" CXXFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/g++" --with-cc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicc --with-cxx=/blues/gpfs/home/software/spack-0.10.1/opt/spack/lHDF5-DIAG: Error detected in HDF5 (1.10.5) MPI-process 46: #000: H5D.c line 145 in H5Dcreate2(): unable to create dataset major: Dataset minor: Unable to initialize object #001: H5Dint.c line 329 in H5D__create_named(): unable to create and link to dataset major: Dataset minor: Unable to initialize object #002: H5L.c line 1557 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1798 in H5L__create_real(): can't insert link major: Links minor: Unable to insert object #004: H5Gtraverse.c line 851 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 627 in H5G__traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1604 in H5L__link_cb(): unable to create object major: Links minor: Unable to initialize object #007: H5Oint.c line 2453 in H5O_obj_create(): unable to open object major: Object header minor: Can't open object #008: H5Doh.c line 300 in H5O__dset_create(): unable to create dataset major: Dataset minor: Unable to initialize object #009: H5Dint.c line 1274 in H5D__create(): unable to construct layout information major: Dataset minor: Unable to initialize object #010: H5Dchunk.c line 872 in H5D__chunk_construct(): unable to set chunk sizes major: Dataset minor: Bad value #011: H5Dchunk.c line 831 in H5D__chunk_set_sizes(): chunk size must be < 4GB major: Dataset minor: Unable to initialize object [46]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [46]PETSC ERROR: Error in external library [46]PETSC ERROR: Error in HDF5 call H5Dcreate2() Status -1 [46]PETSC ERROR: See https://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. [46]PETSC ERROR: Petsc Release Version 3.12.0, Sep, 29, 2019 [46]PETSC ERROR: ./ex10 on a named apsxrmd-0001 by sajid Fri Oct 11 15:23:48 2019 [46]PETSC ERROR: Configure options --prefix=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/petsc-3.12.0-dhpnwwpsdks6asnb4wjywjyms24dlmhl --with-ssl=0 --download-c2html=0 --download-sowing=0 --download-hwloc=0 CFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gcc" FFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gfortran" CXXFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/g++" --with-cc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicc --with-cxx=/blues/gpfs/home/software/spack-0.10.1/opt/spack/lHDF5-DIAG: Error detected in HDF5 (1.10.5) MPI-process 48: #000: H5D.c line 145 in H5Dcreate2(): unable to create dataset major: Dataset minor: Unable to initialize object #001: H5Dint.c line 329 in H5D__create_named(): unable to create and link to dataset major: Dataset minor: Unable to initialize object #002: H5L.c line 1557 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1798 in H5L__create_real(): can't insert link major: Links minor: Unable to insert object #004: H5Gtraverse.c line 851 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 627 in H5G__traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1604 in H5L__link_cb(): unable to create object major: Links minor: Unable to initialize object #007: H5Oint.c line 2453 in H5O_obj_create(): unable to open object major: Object header minor: Can't open object #008: H5Doh.c line 300 in H5O__dset_create(): unable to create dataset major: Dataset minor: Unable to initialize object #009: H5Dint.c line 1274 in H5D__create(): unable to construct layout information major: Dataset minor: Unable to initialize object #010: H5Dchunk.c line 872 in H5D__chunk_construct(): unable to set chunk sizes major: Dataset minor: Bad value #011: H5Dchunk.c line 831 in H5D__chunk_set_sizes(): chunk size must be < 4GB major: Dataset minor: Unable to initialize object [48]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [48]PETSC ERROR: Error in external library [48]PETSC ERROR: Error in HDF5 call H5Dcreate2() Status -1 [48]PETSC ERROR: See https://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. [48]PETSC ERROR: Petsc Release Version 3.12.0, Sep, 29, 2019 [48]PETSC ERROR: ./ex10 on a named apsxrmd-0001 by sajid Fri Oct 11 15:23:48 2019 [48]PETSC ERROR: Configure options --prefix=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/petsc-3.12.0-dhpnwwpsdks6asnb4wjywjyms24dlmhl --with-ssl=0 --download-c2html=0 --download-sowing=0 --download-hwloc=0 CFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gcc" FFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gfortran" CXXFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/g++" --with-cc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicc --with-cxx=/blues/gpfs/home/software/spack-0.10.1/opt/spack/lHDF5-DIAG: Error detected in HDF5 (1.10.5) MPI-process 51: #000: H5D.c line 145 in H5Dcreate2(): unable to create dataset major: Dataset minor: Unable to initialize object #001: H5Dint.c line 329 in H5D__create_named(): unable to create and link to dataset major: Dataset minor: Unable to initialize object #002: H5L.c line 1557 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1798 in H5L__create_real(): can't insert link major: Links minor: Unable to insert object #004: H5Gtraverse.c line 851 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 627 in H5G__traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1604 in H5L__link_cb(): unable to create object major: Links minor: Unable to initialize object #007: H5Oint.c line 2453 in H5O_obj_create(): unable to open object major: Object header minor: Can't open object #008: H5Doh.c line 300 in H5O__dset_create(): unable to create dataset major: Dataset minor: Unable to initialize object #009: H5Dint.c line 1274 in H5D__create(): unable to construct layout information major: Dataset minor: Unable to initialize object #010: H5Dchunk.c line 872 in H5D__chunk_construct(): unable to set chunk sizes major: Dataset minor: Bad value #011: H5Dchunk.c line 831 in H5D__chunk_set_sizes(): chunk size must be < 4GB major: Dataset minor: Unable to initialize object [51]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [51]PETSC ERROR: Error in external library [51]PETSC ERROR: Error in HDF5 call H5Dcreate2() Status -1 [51]PETSC ERROR: See https://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. [51]PETSC ERROR: Petsc Release Version 3.12.0, Sep, 29, 2019 [51]PETSC ERROR: ./ex10 on a named apsxrmd-0001 by sajid Fri Oct 11 15:23:48 2019 [51]PETSC ERROR: Configure options --prefix=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/petsc-3.12.0-dhpnwwpsdks6asnb4wjywjyms24dlmhl --with-ssl=0 --download-c2html=0 --download-sowing=0 --download-hwloc=0 CFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gcc" FFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gfortran" CXXFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/g++" --with-cc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicc --with-cxx=/blues/gpfs/home/software/spack-0.10.1/opt/spack/lHDF5-DIAG: Error detected in HDF5 (1.10.5) MPI-process 54: #000: H5D.c line 145 in H5Dcreate2(): unable to create dataset major: Dataset minor: Unable to initialize object #001: H5Dint.c line 329 in H5D__create_named(): unable to create and link to dataset major: Dataset minor: Unable to initialize object #002: H5L.c line 1557 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1798 in H5L__create_real(): can't insert link major: Links minor: Unable to insert object #004: H5Gtraverse.c line 851 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 627 in H5G__traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1604 in H5L__link_cb(): unable to create object major: Links minor: Unable to initialize object #007: H5Oint.c line 2453 in H5O_obj_create(): unable to open object major: Object header minor: Can't open object #008: H5Doh.c line 300 in H5O__dset_create(): unable to create dataset major: Dataset minor: Unable to initialize object #009: H5Dint.c line 1274 in H5D__create(): unable to construct layout information major: Dataset minor: Unable to initialize object #010: H5Dchunk.c line 872 in H5D__chunk_construct(): unable to set chunk sizes major: Dataset minor: Bad value #011: H5Dchunk.c line 831 in H5D__chunk_set_sizes(): chunk size must be < 4GB major: Dataset minor: Unable to initialize object [54]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [54]PETSC ERROR: Error in external library [54]PETSC ERROR: Error in HDF5 call H5Dcreate2() Status -1 [54]PETSC ERROR: See https://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. [54]PETSC ERROR: Petsc Release Version 3.12.0, Sep, 29, 2019 [54]PETSC ERROR: ./ex10 on a named apsxrmd-0001 by sajid Fri Oct 11 15:23:48 2019 [54]PETSC ERROR: Configure options --prefix=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/petsc-3.12.0-dhpnwwpsdks6asnb4wjywjyms24dlmhl --with-ssl=0 --download-c2html=0 --download-sowing=0 --download-hwloc=0 CFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gcc" FFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gfortran" CXXFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/g++" --with-cc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicc --with-cxx=/blues/gpfs/home/software/spack-0.10.1/opt/spack/lHDF5-DIAG: Error detected in HDF5 (1.10.5) MPI-process 56: #000: H5D.c line 145 in H5Dcreate2(): unable to create dataset major: Dataset minor: Unable to initialize object #001: H5Dint.c line 329 in H5D__create_named(): unable to create and link to dataset major: Dataset minor: Unable to initialize object #002: H5L.c line 1557 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1798 in H5L__create_real(): can't insert link major: Links minor: Unable to insert object #004: H5Gtraverse.c line 851 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 627 in H5G__traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1604 in H5L__link_cb(): unable to create object major: Links minor: Unable to initialize object #007: H5Oint.c line 2453 in H5O_obj_create(): unable to open object major: Object header minor: Can't open object #008: H5Doh.c line 300 in H5O__dset_create(): unable to create dataset major: Dataset minor: Unable to initialize object #009: H5Dint.c line 1274 in H5D__create(): unable to construct layout information major: Dataset minor: Unable to initialize object #010: H5Dchunk.c line 872 in H5D__chunk_construct(): unable to set chunk sizes major: Dataset minor: Bad value #011: H5Dchunk.c line 831 in H5D__chunk_set_sizes(): chunk size must be < 4GB major: Dataset minor: Unable to initialize object [56]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [56]PETSC ERROR: Error in external library [56]PETSC ERROR: Error in HDF5 call H5Dcreate2() Status -1 [56]PETSC ERROR: See https://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. [56]PETSC ERROR: Petsc Release Version 3.12.0, Sep, 29, 2019 [56]PETSC ERROR: ./ex10 on a named apsxrmd-0001 by sajid Fri Oct 11 15:23:48 2019 [56]PETSC ERROR: Configure options --prefix=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/petsc-3.12.0-dhpnwwpsdks6asnb4wjywjyms24dlmhl --with-ssl=0 --download-c2html=0 --download-sowing=0 --download-hwloc=0 CFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gcc" FFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gfortran" CXXFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/g++" --with-cc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicc --with-cxx=/blues/gpfs/home/software/spack-0.10.1/opt/spack/lHDF5-DIAG: Error detected in HDF5 (1.10.5) MPI-process 57: #000: H5D.c line 145 in H5Dcreate2(): unable to create dataset major: Dataset minor: Unable to initialize object #001: H5Dint.c line 329 in H5D__create_named(): unable to create and link to dataset major: Dataset minor: Unable to initialize object #002: H5L.c line 1557 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1798 in H5L__create_real(): can't insert link major: Links minor: Unable to insert object #004: H5Gtraverse.c line 851 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 627 in H5G__traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1604 in H5L__link_cb(): unable to create object major: Links minor: Unable to initialize object #007: H5Oint.c line 2453 in H5O_obj_create(): unable to open object major: Object header minor: Can't open object #008: H5Doh.c line 300 in H5O__dset_create(): unable to create dataset major: Dataset minor: Unable to initialize object #009: H5Dint.c line 1274 in H5D__create(): unable to construct layout information major: Dataset minor: Unable to initialize object #010: H5Dchunk.c line 872 in H5D__chunk_construct(): unable to set chunk sizes major: Dataset minor: Bad value #011: H5Dchunk.c line 831 in H5D__chunk_set_sizes(): chunk size must be < 4GB major: Dataset minor: Unable to initialize object [57]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [57]PETSC ERROR: Error in external library [57]PETSC ERROR: Error in HDF5 call H5Dcreate2() Status -1 [57]PETSC ERROR: See https://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. [57]PETSC ERROR: Petsc Release Version 3.12.0, Sep, 29, 2019 [57]PETSC ERROR: ./ex10 on a named apsxrmd-0001 by sajid Fri Oct 11 15:23:48 2019 [57]PETSC ERROR: Configure options --prefix=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/petsc-3.12.0-dhpnwwpsdks6asnb4wjywjyms24dlmhl --with-ssl=0 --download-c2html=0 --download-sowing=0 --download-hwloc=0 CFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gcc" FFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gfortran" CXXFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/g++" --with-cc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicc --with-cxx=/blues/gpfs/home/software/spack-0.10.1/opt/spack/lHDF5-DIAG: Error detected in HDF5 (1.10.5) MPI-process 58: #000: H5D.c line 145 in H5Dcreate2(): unable to create dataset major: Dataset minor: Unable to initialize object #001: H5Dint.c line 329 in H5D__create_named(): unable to create and link to dataset major: Dataset minor: Unable to initialize object #002: H5L.c line 1557 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1798 in H5L__create_real(): can't insert link major: Links minor: Unable to insert object #004: H5Gtraverse.c line 851 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 627 in H5G__traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1604 in H5L__link_cb(): unable to create object major: Links minor: Unable to initialize object #007: H5Oint.c line 2453 in H5O_obj_create(): unable to open object major: Object header minor: Can't open object #008: H5Doh.c line 300 in H5O__dset_create(): unable to create dataset major: Dataset minor: Unable to initialize object #009: H5Dint.c line 1274 in H5D__create(): unable to construct layout information major: Dataset minor: Unable to initialize object #010: H5Dchunk.c line 872 in H5D__chunk_construct(): unable to set chunk sizes major: Dataset minor: Bad value #011: H5Dchunk.c line 831 in H5D__chunk_set_sizes(): chunk size must be < 4GB major: Dataset minor: Unable to initialize object [58]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [58]PETSC ERROR: Error in external library [58]PETSC ERROR: Error in HDF5 call H5Dcreate2() Status -1 [58]PETSC ERROR: See https://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. [58]PETSC ERROR: Petsc Release Version 3.12.0, Sep, 29, 2019 [58]PETSC ERROR: ./ex10 on a named apsxrmd-0001 by sajid Fri Oct 11 15:23:48 2019 [58]PETSC ERROR: Configure options --prefix=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/petsc-3.12.0-dhpnwwpsdks6asnb4wjywjyms24dlmhl --with-ssl=0 --download-c2html=0 --download-sowing=0 --download-hwloc=0 CFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gcc" FFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gfortran" CXXFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/g++" --with-cc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicc --with-cxx=/blues/gpfs/home/software/spack-0.10.1/opt/spack/lHDF5-DIAG: Error detected in HDF5 (1.10.5) MPI-process 60: #000: H5D.c line 145 in H5Dcreate2(): unable to create dataset major: Dataset minor: Unable to initialize object #001: H5Dint.c line 329 in H5D__create_named(): unable to create and link to dataset major: Dataset minor: Unable to initialize object #002: H5L.c line 1557 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1798 in H5L__create_real(): can't insert link major: Links minor: Unable to insert object #004: H5Gtraverse.c line 851 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 627 in H5G__traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1604 in H5L__link_cb(): unable to create object major: Links minor: Unable to initialize object #007: H5Oint.c line 2453 in H5O_obj_create(): unable to open object major: Object header minor: Can't open object #008: H5Doh.c line 300 in H5O__dset_create(): unable to create dataset major: Dataset minor: Unable to initialize object #009: H5Dint.c line 1274 in H5D__create(): unable to construct layout information major: Dataset minor: Unable to initialize object #010: H5Dchunk.c line 872 in H5D__chunk_construct(): unable to set chunk sizes major: Dataset minor: Bad value #011: H5Dchunk.c line 831 in H5D__chunk_set_sizes(): chunk size must be < 4GB major: Dataset minor: Unable to initialize object [60]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [60]PETSC ERROR: Error in external library [60]PETSC ERROR: Error in HDF5 call H5Dcreate2() Status -1 [60]PETSC ERROR: See https://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. [60]PETSC ERROR: Petsc Release Version 3.12.0, Sep, 29, 2019 [60]PETSC ERROR: ./ex10 on a named apsxrmd-0001 by sajid Fri Oct 11 15:23:48 2019 [60]PETSC ERROR: Configure options --prefix=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/petsc-3.12.0-dhpnwwpsdks6asnb4wjywjyms24dlmhl --with-ssl=0 --download-c2html=0 --download-sowing=0 --download-hwloc=0 CFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gcc" FFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gfortran" CXXFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/g++" --with-cc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicc --with-cxx=/blues/gpfs/home/software/spack-0.10.1/opt/spack/lHDF5-DIAG: Error detected in HDF5 (1.10.5) MPI-process 61: #000: H5D.c line 145 in H5Dcreate2(): unable to create dataset major: Dataset minor: Unable to initialize object #001: H5Dint.c line 329 in H5D__create_named(): unable to create and link to dataset major: Dataset minor: Unable to initialize object #002: H5L.c line 1557 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1798 in H5L__create_real(): can't insert link major: Links minor: Unable to insert object #004: H5Gtraverse.c line 851 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 627 in H5G__traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1604 in H5L__link_cb(): unable to create object major: Links minor: Unable to initialize object #007: H5Oint.c line 2453 in H5O_obj_create(): unable to open object major: Object header minor: Can't open object #008: H5Doh.c line 300 in H5O__dset_create(): unable to create dataset major: Dataset minor: Unable to initialize object #009: H5Dint.c line 1274 in H5D__create(): unable to construct layout information major: Dataset minor: Unable to initialize object #010: H5Dchunk.c line 872 in H5D__chunk_construct(): unable to set chunk sizes major: Dataset minor: Bad value #011: H5Dchunk.c line 831 in H5D__chunk_set_sizes(): chunk size must be < 4GB major: Dataset minor: Unable to initialize object [61]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [61]PETSC ERROR: Error in external library [61]PETSC ERROR: Error in HDF5 call H5Dcreate2() Status -1 [61]PETSC ERROR: See https://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. [61]PETSC ERROR: Petsc Release Version 3.12.0, Sep, 29, 2019 [61]PETSC ERROR: ./ex10 on a named apsxrmd-0001 by sajid Fri Oct 11 15:23:48 2019 [61]PETSC ERROR: Configure options --prefix=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/petsc-3.12.0-dhpnwwpsdks6asnb4wjywjyms24dlmhl --with-ssl=0 --download-c2html=0 --download-sowing=0 --download-hwloc=0 CFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gcc" FFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gfortran" CXXFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/g++" --with-cc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicc --with-cxx=/blues/gpfs/home/software/spack-0.10.1/opt/spack/lHDF5-DIAG: Error detected in HDF5 (1.10.5) MPI-process 62: #000: H5D.c line 145 in H5Dcreate2(): unable to create dataset major: Dataset minor: Unable to initialize object #001: H5Dint.c line 329 in H5D__create_named(): unable to create and link to dataset major: Dataset minor: Unable to initialize object #002: H5L.c line 1557 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1798 in H5L__create_real(): can't insert link major: Links minor: Unable to insert object #004: H5Gtraverse.c line 851 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 627 in H5G__traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1604 in H5L__link_cb(): unable to create object major: Links minor: Unable to initialize object #007: H5Oint.c line 2453 in H5O_obj_create(): unable to open object major: Object header minor: Can't open object #008: H5Doh.c line 300 in H5O__dset_create(): unable to create dataset major: Dataset minor: Unable to initialize object #009: H5Dint.c line 1274 in H5D__create(): unable to construct layout information major: Dataset minor: Unable to initialize object #010: H5Dchunk.c line 872 in H5D__chunk_construct(): unable to set chunk sizes major: Dataset minor: Bad value #011: H5Dchunk.c line 831 in H5D__chunk_set_sizes(): chunk size must be < 4GB major: Dataset minor: Unable to initialize object [62]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [62]PETSC ERROR: Error in external library [62]PETSC ERROR: Error in HDF5 call H5Dcreate2() Status -1 [62]PETSC ERROR: See https://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. [62]PETSC ERROR: Petsc Release Version 3.12.0, Sep, 29, 2019 [62]PETSC ERROR: ./ex10 on a named apsxrmd-0001 by sajid Fri Oct 11 15:23:48 2019 [62]PETSC ERROR: Configure options --prefix=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/petsc-3.12.0-dhpnwwpsdks6asnb4wjywjyms24dlmhl --with-ssl=0 --download-c2html=0 --download-sowing=0 --download-hwloc=0 CFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gcc" FFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gfortran" CXXFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/g++" --with-cc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicc --with-cxx=/blues/gpfs/home/software/spack-0.10.1/opt/spack/lHDF5-DIAG: Error detected in HDF5 (1.10.5) MPI-process 63: #000: H5D.c line 145 in H5Dcreate2(): unable to create dataset major: Dataset minor: Unable to initialize object #001: H5Dint.c line 329 in H5D__create_named(): unable to create and link to dataset major: Dataset minor: Unable to initialize object #002: H5L.c line 1557 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1798 in H5L__create_real(): can't insert link major: Links minor: Unable to insert object #004: H5Gtraverse.c line 851 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 627 in H5G__traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1604 in H5L__link_cb(): unable to create object major: Links minor: Unable to initialize object #007: H5Oint.c line 2453 in H5O_obj_create(): unable to open object major: Object header minor: Can't open object #008: H5Doh.c line 300 in H5O__dset_create(): unable to create dataset major: Dataset minor: Unable to initialize object #009: H5Dint.c line 1274 in H5D__create(): unable to construct layout information major: Dataset minor: Unable to initialize object #010: H5Dchunk.c line 872 in H5D__chunk_construct(): unable to set chunk sizes major: Dataset minor: Bad value #011: H5Dchunk.c line 831 in H5D__chunk_set_sizes(): chunk size must be < 4GB major: Dataset minor: Unable to initialize object [63]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [63]PETSC ERROR: Error in external library [63]PETSC ERROR: Error in HDF5 call H5Dcreate2() Status -1 [63]PETSC ERROR: See https://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. [63]PETSC ERROR: Petsc Release Version 3.12.0, Sep, 29, 2019 [63]PETSC ERROR: ./ex10 on a named apsxrmd-0001 by sajid Fri Oct 11 15:23:48 2019 [63]PETSC ERROR: Configure options --prefix=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/petsc-3.12.0-dhpnwwpsdks6asnb4wjywjyms24dlmhl --with-ssl=0 --download-c2html=0 --download-sowing=0 --download-hwloc=0 CFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gcc" FFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gfortran" CXXFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/g++" --with-cc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicc --with-cxx=/blues/gpfs/home/software/spack-0.10.1/opt/spack/l[0]PETSC ERROR: #1 VecView_MPI_HDF5() line 814 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [0]PETSC ERROR: #2 VecView_MPI() line 951 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [0]PETSC ERROR: #3 VecView() line 574 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/interface/vector.c [0]PETSC ERROR: #4 main() line 47 in ex10.c [0]PETSC ERROR: PETSc Option Table entries: [0]PETSC ERROR: -log_view [0]PETSC ERROR: -m 268435456 [0]PETSC ERROR: ----------------End of Error Message -------send entire error message to petsc-maint@mcs.anl.gov---------- application called MPI_Abort(MPI_COMM_WORLD, 76) - process 0 slurmstepd: error: *** STEP 1286976.0 ON apsxrmd-0001 CANCELLED AT 2019-10-11T15:23:50 *** spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_core.so /lib64/libpthread.so /lib64/libm.so /lib64/libdl.so" --with-avx-512-kernels --with-memalign=64 --with-x=0 --with-clanguage=C --with-scalapack=0 --with-metis=1 --with-metis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/metis-5.1.0-2uxjs6gihdopyqjjyapxloxmopt3fyuf --with-hdf5=1 --with-hdf5-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/hdf5-1.10.5-4l2oqer7h7evmjcweba5iym767fnvn4g --with-hypre=0 --with-parmetis=1 --with-parmetis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/parmetis-4.0.3-ilq6ip5ckg7shv5pbbqpnqoihqag4x4e --with-mumps=0 --with-trilinos=0 --with-fftw=1 --with-fftw-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/fftw-3.3.8-rfi7e56hwc7gcek5w5er3evkb7cefks2 --with-superlu_dist=0 --with-suitesparse=0 --with-zlib-include=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/include --with-zlib-lib="-L/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/lib -lz" --with-zlib=1 [1]PETSC ERROR: #1 VecView_MPI_HDF5() line 814 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [1]PETSC ERROR: #2 VecView_MPI() line 951 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [1]PETSC ERROR: #3 VecView() line 574 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/interface/vector.c [1]PETSC ERROR: #4 main() line 47 in ex10.c [1]PETSC ERROR: PETSc Option Table entries: [1]PETSC ERROR: -log_view [1]PETSC ERROR: -m 268435456 [1]PETSC ERROR: ----------------End of Error Message -------send entire error message to petsc-maint@mcs.anl.gov---------- perlu_dist=0 --with-suitesparse=0 --with-zlib-include=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/include --with-zlib-lib="-L/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/lib -lz" --with-zlib=1 [2]PETSC ERROR: #1 VecView_MPI_HDF5() line 814 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [2]PETSC ERROR: #2 VecView_MPI() line 951 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [2]PETSC ERROR: #3 VecView() line 574 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/interface/vector.c [2]PETSC ERROR: #4 main() line 47 in ex10.c [2]PETSC ERROR: PETSc Option Table entries: [2]PETSC ERROR: -log_view [2]PETSC ERROR: -m 268435456 [2]PETSC ERROR: ----------------End of Error Message -------send entire error message to petsc-maint@mcs.anl.gov---------- [3]PETSC ERROR: #2 VecView_MPI() line 951 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [3]PETSC ERROR: #3 VecView() line 574 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/interface/vector.c [3]PETSC ERROR: #4 main() line 47 in ex10.c [3]PETSC ERROR: PETSc Option Table entries: [3]PETSC ERROR: -log_view [3]PETSC ERROR: -m 268435456 [3]PETSC ERROR: ----------------End of Error Message -------send entire error message to petsc-maint@mcs.anl.gov---------- nux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicpc --with-fc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiifort --FC_LINKER_FLAGS=-lintlc --with-precision=double --with-scalar-type=complex --with-shared-libraries=1 --with-debugging=0 --with-64-bit-indices=1 COPTFLAGS= FOPTFLAGS= CXXOPTFLAGS= --with-blaslapack-lib="/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_intel_lp64.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_sequential.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_core.so /lib64/libpthread.so /lib64/libm.so /lib64/libdl.so" --with-avx-512-kernels --with-memalign=64 --with-x=0 --with-clanguage=C --with-scalapack=0 --with-metis=1 --with-metis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/metis-5.1.0-2uxjs6gihdopyqjjyapxloxmopt3fyuf --with-hdf5=1 --with-hdf5-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/hdf5-1.10.5-4l2oqer7h7evmjcweba5iym767fnvn4g --with-hypre=0 --with-parmetis=1 --with-parmetis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/parmetis-4.0.3-ilq6ip5ckg7shv5pbbqpnqoihqag4x4e --with-mumps=0 --with-trilinos=0 --with-fftw=1 --with-fftw-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/fftw-3.3.8-rfi7e56hwc7gcek5w5er3evkb7cefks2 --with-superlu_dist=0 --with-suitesparse=0 --with-zlib-include=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/include --with-zlib-lib="-L/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/lib -lz" --with-zlib=1 [4]PETSC ERROR: #1 VecView_MPI_HDF5() line 814 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [4]PETSC ERROR: #2 VecView_MPI() line 951 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [4]PETSC ERROR: #3 VecView() line 574 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/interface/vector.c [4]PETSC ERROR: #4 main() line 47 in ex10.c [4]PETSC ERROR: PETSc Option Table entries: [4]PETSC ERROR: -log_view [4]PETSC ERROR: -m 268435456 [4]PETSC ERROR: ----------------End of Error Message -------send entire error message to petsc-maint@mcs.anl.gov---------- nux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicpc --with-fc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiifort --FC_LINKER_FLAGS=-lintlc --with-precision=double --with-scalar-type=complex --with-shared-libraries=1 --with-debugging=0 --with-64-bit-indices=1 COPTFLAGS= FOPTFLAGS= CXXOPTFLAGS= --with-blaslapack-lib="/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_intel_lp64.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_sequential.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_core.so /lib64/libpthread.so /lib64/libm.so /lib64/libdl.so" --with-avx-512-kernels --with-memalign=64 --with-x=0 --with-clanguage=C --with-scalapack=0 --with-metis=1 --with-metis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/metis-5.1.0-2uxjs6gihdopyqjjyapxloxmopt3fyuf --with-hdf5=1 --with-hdf5-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/hdf5-1.10.5-4l2oqer7h7evmjcweba5iym767fnvn4g --with-hypre=0 --with-parmetis=1 --with-parmetis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/parmetis-4.0.3-ilq6ip5ckg7shv5pbbqpnqoihqag4x4e --with-mumps=0 --with-trilinos=0 --with-fftw=1 --with-fftw-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/fftw-3.3.8-rfi7e56hwc7gcek5w5er3evkb7cefks2 --with-superlu_dist=0 --with-suitesparse=0 --with-zlib-include=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/include --with-zlib-lib="-L/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/lib -lz" --with-zlib=1 [5]PETSC ERROR: #1 VecView_MPI_HDF5() line 814 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [5]PETSC ERROR: #2 VecView_MPI() line 951 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [5]PETSC ERROR: #3 VecView() line 574 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/interface/vector.c [5]PETSC ERROR: #4 main() line 47 in ex10.c [5]PETSC ERROR: PETSc Option Table entries: [5]PETSC ERROR: -log_view [5]PETSC ERROR: -m 268435456 [5]PETSC ERROR: ----------------End of Error Message -------send entire error message to petsc-maint@mcs.anl.gov---------- nux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicpc --with-fc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiifort --FC_LINKER_FLAGS=-lintlc --with-precision=double --with-scalar-type=complex --with-shared-libraries=1 --with-debugging=0 --with-64-bit-indices=1 COPTFLAGS= FOPTFLAGS= CXXOPTFLAGS= --with-blaslapack-lib="/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_intel_lp64.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_sequential.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_core.so /lib64/libpthread.so /lib64/libm.so /lib64/libdl.so" --with-avx-512-kernels --with-memalign=64 --with-x=0 --with-clanguage=C --with-scalapack=0 --with-metis=1 --with-metis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/metis-5.1.0-2uxjs6gihdopyqjjyapxloxmopt3fyuf --with-hdf5=1 --with-hdf5-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/hdf5-1.10.5-4l2oqer7h7evmjcweba5iym767fnvn4g --with-hypre=0 --with-parmetis=1 --with-parmetis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/parmetis-4.0.3-ilq6ip5ckg7shv5pbbqpnqoihqag4x4e --with-mumps=0 --with-trilinos=0 --with-fftw=1 --with-fftw-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/fftw-3.3.8-rfi7e56hwc7gcek5w5er3evkb7cefks2 --with-superlu_dist=0 --with-suitesparse=0 --with-zlib-include=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/include --with-zlib-lib="-L/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/lib -lz" --with-zlib=1 [6]PETSC ERROR: #1 VecView_MPI_HDF5() line 814 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [6]PETSC ERROR: #2 VecView_MPI() line 951 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [6]PETSC ERROR: #3 VecView() line 574 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/interface/vector.c [6]PETSC ERROR: #4 main() line 47 in ex10.c [6]PETSC ERROR: PETSc Option Table entries: [6]PETSC ERROR: -log_view [6]PETSC ERROR: -m 268435456 [6]PETSC ERROR: ----------------End of Error Message -------send entire error message to petsc-maint@mcs.anl.gov---------- perlu_dist=0 --with-suitesparse=0 --with-zlib-include=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/include --with-zlib-lib="-L/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/lib -lz" --with-zlib=1 [7]PETSC ERROR: #1 VecView_MPI_HDF5() line 814 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [7]PETSC ERROR: #2 VecView_MPI() line 951 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [7]PETSC ERROR: #3 VecView() line 574 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/interface/vector.c [7]PETSC ERROR: #4 main() line 47 in ex10.c [7]PETSC ERROR: PETSc Option Table entries: [7]PETSC ERROR: -log_view [7]PETSC ERROR: -m 268435456 [7]PETSC ERROR: ----------------End of Error Message -------send entire error message to petsc-maint@mcs.anl.gov---------- nux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicpc --with-fc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiifort --FC_LINKER_FLAGS=-lintlc --with-precision=double --with-scalar-type=complex --with-shared-libraries=1 --with-debugging=0 --with-64-bit-indices=1 COPTFLAGS= FOPTFLAGS= CXXOPTFLAGS= --with-blaslapack-lib="/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_intel_lp64.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_sequential.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_core.so /lib64/libpthread.so /lib64/libm.so /lib64/libdl.so" --with-avx-512-kernels --with-memalign=64 --with-x=0 --with-clanguage=C --with-scalapack=0 --with-metis=1 --with-metis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/metis-5.1.0-2uxjs6gihdopyqjjyapxloxmopt3fyuf --with-hdf5=1 --with-hdf5-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/hdf5-1.10.5-4l2oqer7h7evmjcweba5iym767fnvn4g --with-hypre=0 --with-parmetis=1 --with-parmetis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/parmetis-4.0.3-ilq6ip5ckg7shv5pbbqpnqoihqag4x4e --with-mumps=0 --with-trilinos=0 --with-fftw=1 --with-fftw-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/fftw-3.3.8-rfi7e56hwc7gcek5w5er3evkb7cefks2 --with-superlu_dist=0 --with-suitesparse=0 --with-zlib-include=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/include --with-zlib-lib="-L/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/lib -lz" --with-zlib=1 [8]PETSC ERROR: #1 VecView_MPI_HDF5() line 814 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [8]PETSC ERROR: #2 VecView_MPI() line 951 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [8]PETSC ERROR: #3 VecView() line 574 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/interface/vector.c [8]PETSC ERROR: #4 main() line 47 in ex10.c [8]PETSC ERROR: PETSc Option Table entries: [8]PETSC ERROR: -log_view [8]PETSC ERROR: -m 268435456 [8]PETSC ERROR: ----------------End of Error Message -------send entire error message to petsc-maint@mcs.anl.gov---------- application called MPI_Abort(MPI_COMM_WORLD, 76) - process 8 nux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicpc --with-fc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiifort --FC_LINKER_FLAGS=-lintlc --with-precision=double --with-scalar-type=complex --with-shared-libraries=1 --with-debugging=0 --with-64-bit-indices=1 COPTFLAGS= FOPTFLAGS= CXXOPTFLAGS= --with-blaslapack-lib="/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_intel_lp64.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_sequential.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_core.so /lib64/libpthread.so /lib64/libm.so /lib64/libdl.so" --with-avx-512-kernels --with-memalign=64 --with-x=0 --with-clanguage=C --with-scalapack=0 --with-metis=1 --with-metis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/metis-5.1.0-2uxjs6gihdopyqjjyapxloxmopt3fyuf --with-hdf5=1 --with-hdf5-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/hdf5-1.10.5-4l2oqer7h7evmjcweba5iym767fnvn4g --with-hypre=0 --with-parmetis=1 --with-parmetis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/parmetis-4.0.3-ilq6ip5ckg7shv5pbbqpnqoihqag4x4e --with-mumps=0 --with-trilinos=0 --with-fftw=1 --with-fftw-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/fftw-3.3.8-rfi7e56hwc7gcek5w5er3evkb7cefks2 --with-superlu_dist=0 --with-suitesparse=0 --with-zlib-include=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/include --with-zlib-lib="-L/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/lib -lz" --with-zlib=1 [9]PETSC ERROR: #1 VecView_MPI_HDF5() line 814 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [9]PETSC ERROR: #2 VecView_MPI() line 951 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [9]PETSC ERROR: #3 VecView() line 574 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/interface/vector.c [9]PETSC ERROR: #4 main() line 47 in ex10.c [9]PETSC ERROR: PETSc Option Table entries: [9]PETSC ERROR: -log_view [9]PETSC ERROR: -m 268435456 [9]PETSC ERROR: ----------------End of Error Message -------send entire error message to petsc-maint@mcs.anl.gov---------- application called MPI_Abort(MPI_COMM_WORLD, 76) - process 9 inux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicpc --with-fc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiifort --FC_LINKER_FLAGS=-lintlc --with-precision=double --with-scalar-type=complex --with-shared-libraries=1 --with-debugging=0 --with-64-bit-indices=1 COPTFLAGS= FOPTFLAGS= CXXOPTFLAGS= --with-blaslapack-lib="/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_intel_lp64.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_sequential.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_core.so /lib64/libpthread.so /lib64/libm.so /lib64/libdl.so" --with-avx-512-kernels --with-memalign=64 --with-x=0 --with-clanguage=C --with-scalapack=0 --with-metis=1 --with-metis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/metis-5.1.0-2uxjs6gihdopyqjjyapxloxmopt3fyuf --with-hdf5=1 --with-hdf5-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/hdf5-1.10.5-4l2oqer7h7evmjcweba5iym767fnvn4g --with-hypre=0 --with-parmetis=1 --with-parmetis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/parmetis-4.0.3-ilq6ip5ckg7shv5pbbqpnqoihqag4x4e --with-mumps=0 --with-trilinos=0 --with-fftw=1 --with-fftw-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/fftw-3.3.8-rfi7e56hwc7gcek5w5er3evkb7cefks2 --with-superlu_dist=0 --with-suitesparse=0 --with-zlib-include=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/include --with-zlib-lib="-L/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/lib -lz" --with-zlib=1 [10]PETSC ERROR: #1 VecView_MPI_HDF5() line 814 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [10]PETSC ERROR: #2 VecView_MPI() line 951 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [10]PETSC ERROR: #3 VecView() line 574 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/interface/vector.c [10]PETSC ERROR: #4 main() line 47 in ex10.c [10]PETSC ERROR: PETSc Option Table entries: [10]PETSC ERROR: -log_view [10]PETSC ERROR: -m 268435456 [10]PETSC ERROR: ----------------End of Error Message -------send entire error message to petsc-maint@mcs.anl.gov---------- application called MPI_Abort(MPI_COMM_WORLD, 76) - process 10 inux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicpc --with-fc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiifort --FC_LINKER_FLAGS=-lintlc --with-precision=double --with-scalar-type=complex --with-shared-libraries=1 --with-debugging=0 --with-64-bit-indices=1 COPTFLAGS= FOPTFLAGS= CXXOPTFLAGS= --with-blaslapack-lib="/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_intel_lp64.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_sequential.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_core.so /lib64/libpthread.so /lib64/libm.so /lib64/libdl.so" --with-avx-512-kernels --with-memalign=64 --with-x=0 --with-clanguage=C --with-scalapack=0 --with-metis=1 --with-metis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/metis-5.1.0-2uxjs6gihdopyqjjyapxloxmopt3fyuf --with-hdf5=1 --with-hdf5-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/hdf5-1.10.5-4l2oqer7h7evmjcweba5iym767fnvn4g --with-hypre=0 --with-parmetis=1 --with-parmetis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/parmetis-4.0.3-ilq6ip5ckg7shv5pbbqpnqoihqag4x4e --with-mumps=0 --with-trilinos=0 --with-fftw=1 --with-fftw-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/fftw-3.3.8-rfi7e56hwc7gcek5w5er3evkb7cefks2 --with-superlu_dist=0 --with-suitesparse=0 --with-zlib-include=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/include --with-zlib-lib="-L/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/lib -lz" --with-zlib=1 [11]PETSC ERROR: #1 VecView_MPI_HDF5() line 814 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [11]PETSC ERROR: #2 VecView_MPI() line 951 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [11]PETSC ERROR: #3 VecView() line 574 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/interface/vector.c [11]PETSC ERROR: #4 main() line 47 in ex10.c [11]PETSC ERROR: PETSc Option Table entries: [11]PETSC ERROR: -log_view [11]PETSC ERROR: -m 268435456 [11]PETSC ERROR: ----------------End of Error Message -------send entire error message to petsc-maint@mcs.anl.gov---------- application called MPI_Abort(MPI_COMM_WORLD, 76) - process 11 inux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicpc --with-fc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiifort --FC_LINKER_FLAGS=-lintlc --with-precision=double --with-scalar-type=complex --with-shared-libraries=1 --with-debugging=0 --with-64-bit-indices=1 COPTFLAGS= FOPTFLAGS= CXXOPTFLAGS= --with-blaslapack-lib="/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_intel_lp64.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_sequential.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_core.so /lib64/libpthread.so /lib64/libm.so /lib64/libdl.so" --with-avx-512-kernels --with-memalign=64 --with-x=0 --with-clanguage=C --with-scalapack=0 --with-metis=1 --with-metis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/metis-5.1.0-2uxjs6gihdopyqjjyapxloxmopt3fyuf --with-hdf5=1 --with-hdf5-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/hdf5-1.10.5-4l2oqer7h7evmjcweba5iym767fnvn4g --with-hypre=0 --with-parmetis=1 --with-parmetis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/parmetis-4.0.3-ilq6ip5ckg7shv5pbbqpnqoihqag4x4e --with-mumps=0 --with-trilinos=0 --with-fftw=1 --with-fftw-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/fftw-3.3.8-rfi7e56hwc7gcek5w5er3evkb7cefks2 --with-superlu_dist=0 --with-suitesparse=0 --with-zlib-include=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/include --with-zlib-lib="-L/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/lib -lz" --with-zlib=1 [12]PETSC ERROR: #1 VecView_MPI_HDF5() line 814 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [12]PETSC ERROR: #2 VecView_MPI() line 951 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [12]PETSC ERROR: #3 VecView() line 574 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/interface/vector.c [12]PETSC ERROR: #4 main() line 47 in ex10.c [12]PETSC ERROR: PETSc Option Table entries: [12]PETSC ERROR: -log_view [12]PETSC ERROR: -m 268435456 [12]PETSC ERROR: ----------------End of Error Message -------send entire error message to petsc-maint@mcs.anl.gov---------- application called MPI_Abort(MPI_COMM_WORLD, 76) - process 12 inux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicpc --with-fc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiifort --FC_LINKER_FLAGS=-lintlc --with-precision=double --with-scalar-type=complex --with-shared-libraries=1 --with-debugging=0 --with-64-bit-indices=1 COPTFLAGS= FOPTFLAGS= CXXOPTFLAGS= --with-blaslapack-lib="/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_intel_lp64.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_sequential.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_core.so /lib64/libpthread.so /lib64/libm.so /lib64/libdl.so" --with-avx-512-kernels --with-memalign=64 --with-x=0 --with-clanguage=C --with-scalapack=0 --with-metis=1 --with-metis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/metis-5.1.0-2uxjs6gihdopyqjjyapxloxmopt3fyuf --with-hdf5=1 --with-hdf5-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/hdf5-1.10.5-4l2oqer7h7evmjcweba5iym767fnvn4g --with-hypre=0 --with-parmetis=1 --with-parmetis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/parmetis-4.0.3-ilq6ip5ckg7shv5pbbqpnqoihqag4x4e --with-mumps=0 --with-trilinos=0 --with-fftw=1 --with-fftw-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/fftw-3.3.8-rfi7e56hwc7gcek5w5er3evkb7cefks2 --with-superlu_dist=0 --with-suitesparse=0 --with-zlib-include=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/include --with-zlib-lib="-L/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/lib -lz" --with-zlib=1 [13]PETSC ERROR: #1 VecView_MPI_HDF5() line 814 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [13]PETSC ERROR: #2 VecView_MPI() line 951 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [13]PETSC ERROR: #3 VecView() line 574 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/interface/vector.c [13]PETSC ERROR: #4 main() line 47 in ex10.c [13]PETSC ERROR: PETSc Option Table entries: [13]PETSC ERROR: -log_view [13]PETSC ERROR: -m 268435456 [13]PETSC ERROR: ----------------End of Error Message -------send entire error message to petsc-maint@mcs.anl.gov---------- application called MPI_Abort(MPI_COMM_WORLD, 76) - process 13 inux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicpc --with-fc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiifort --FC_LINKER_FLAGS=-lintlc --with-precision=double --with-scalar-type=complex --with-shared-libraries=1 --with-debugging=0 --with-64-bit-indices=1 COPTFLAGS= FOPTFLAGS= CXXOPTFLAGS= --with-blaslapack-lib="/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_intel_lp64.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_sequential.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_core.so /lib64/libpthread.so /lib64/libm.so /lib64/libdl.so" --with-avx-512-kernels --with-memalign=64 --with-x=0 --with-clanguage=C --with-scalapack=0 --with-metis=1 --with-metis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/metis-5.1.0-2uxjs6gihdopyqjjyapxloxmopt3fyuf --with-hdf5=1 --with-hdf5-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/hdf5-1.10.5-4l2oqer7h7evmjcweba5iym767fnvn4g --with-hypre=0 --with-parmetis=1 --with-parmetis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/parmetis-4.0.3-ilq6ip5ckg7shv5pbbqpnqoihqag4x4e --with-mumps=0 --with-trilinos=0 --with-fftw=1 --with-fftw-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/fftw-3.3.8-rfi7e56hwc7gcek5w5er3evkb7cefks2 --with-superlu_dist=0 --with-suitesparse=0 --with-zlib-include=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/include --with-zlib-lib="-L/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/lib -lz" --with-zlib=1 [14]PETSC ERROR: #1 VecView_MPI_HDF5() line 814 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [14]PETSC ERROR: #2 VecView_MPI() line 951 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [14]PETSC ERROR: #3 VecView() line 574 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/interface/vector.c [14]PETSC ERROR: #4 main() line 47 in ex10.c [14]PETSC ERROR: PETSc Option Table entries: [14]PETSC ERROR: -log_view [14]PETSC ERROR: -m 268435456 [14]PETSC ERROR: ----------------End of Error Message -------send entire error message to petsc-maint@mcs.anl.gov---------- application called MPI_Abort(MPI_COMM_WORLD, 76) - process 14 inux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicpc --with-fc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiifort --FC_LINKER_FLAGS=-lintlc --with-precision=double --with-scalar-type=complex --with-shared-libraries=1 --with-debugging=0 --with-64-bit-indices=1 COPTFLAGS= FOPTFLAGS= CXXOPTFLAGS= --with-blaslapack-lib="/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_intel_lp64.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_sequential.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_core.so /lib64/libpthread.so /lib64/libm.so /lib64/libdl.so" --with-avx-512-kernels --with-memalign=64 --with-x=0 --with-clanguage=C --with-scalapack=0 --with-metis=1 --with-metis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/metis-5.1.0-2uxjs6gihdopyqjjyapxloxmopt3fyuf --with-hdf5=1 --with-hdf5-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/hdf5-1.10.5-4l2oqer7h7evmjcweba5iym767fnvn4g --with-hypre=0 --with-parmetis=1 --with-parmetis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/parmetis-4.0.3-ilq6ip5ckg7shv5pbbqpnqoihqag4x4e --with-mumps=0 --with-trilinos=0 --with-fftw=1 --with-fftw-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/fftw-3.3.8-rfi7e56hwc7gcek5w5er3evkb7cefks2 --with-superlu_dist=0 --with-suitesparse=0 --with-zlib-include=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/include --with-zlib-lib="-L/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/lib -lz" --with-zlib=1 [15]PETSC ERROR: #1 VecView_MPI_HDF5() line 814 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [15]PETSC ERROR: #2 VecView_MPI() line 951 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [15]PETSC ERROR: #3 VecView() line 574 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/interface/vector.c [15]PETSC ERROR: #4 main() line 47 in ex10.c [15]PETSC ERROR: PETSc Option Table entries: [15]PETSC ERROR: -log_view [15]PETSC ERROR: -m 268435456 [15]PETSC ERROR: ----------------End of Error Message -------send entire error message to petsc-maint@mcs.anl.gov---------- application called MPI_Abort(MPI_COMM_WORLD, 76) - process 15 inux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicpc --with-fc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiifort --FC_LINKER_FLAGS=-lintlc --with-precision=double --with-scalar-type=complex --with-shared-libraries=1 --with-debugging=0 --with-64-bit-indices=1 COPTFLAGS= FOPTFLAGS= CXXOPTFLAGS= --with-blaslapack-lib="/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_intel_lp64.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_sequential.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_core.so /lib64/libpthread.so /lib64/libm.so /lib64/libdl.so" --with-avx-512-kernels --with-memalign=64 --with-x=0 --with-clanguage=C --with-scalapack=0 --with-metis=1 --with-metis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/metis-5.1.0-2uxjs6gihdopyqjjyapxloxmopt3fyuf --with-hdf5=1 --with-hdf5-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/hdf5-1.10.5-4l2oqer7h7evmjcweba5iym767fnvn4g --with-hypre=0 --with-parmetis=1 --with-parmetis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/parmetis-4.0.3-ilq6ip5ckg7shv5pbbqpnqoihqag4x4e --with-mumps=0 --with-trilinos=0 --with-fftw=1 --with-fftw-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/fftw-3.3.8-rfi7e56hwc7gcek5w5er3evkb7cefks2 --with-superlu_dist=0 --with-suitesparse=0 --with-zlib-include=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/include --with-zlib-lib="-L/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/lib -lz" --with-zlib=1 [16]PETSC ERROR: #1 VecView_MPI_HDF5() line 814 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [16]PETSC ERROR: #2 VecView_MPI() line 951 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [16]PETSC ERROR: #3 VecView() line 574 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/interface/vector.c [16]PETSC ERROR: #4 main() line 47 in ex10.c [16]PETSC ERROR: PETSc Option Table entries: [16]PETSC ERROR: -log_view [16]PETSC ERROR: -m 268435456 [16]PETSC ERROR: ----------------End of Error Message -------send entire error message to petsc-maint@mcs.anl.gov---------- inux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicpc --with-fc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiifort --FC_LINKER_FLAGS=-lintlc --with-precision=double --with-scalar-type=complex --with-shared-libraries=1 --with-debugging=0 --with-64-bit-indices=1 COPTFLAGS= FOPTFLAGS= CXXOPTFLAGS= --with-blaslapack-lib="/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_intel_lp64.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_sequential.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_core.so /lib64/libpthread.so /lib64/libm.so /lib64/libdl.so" --with-avx-512-kernels --with-memalign=64 --with-x=0 --with-clanguage=C --with-scalapack=0 --with-metis=1 --with-metis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/metis-5.1.0-2uxjs6gihdopyqjjyapxloxmopt3fyuf --with-hdf5=1 --with-hdf5-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/hdf5-1.10.5-4l2oqer7h7evmjcweba5iym767fnvn4g --with-hypre=0 --with-parmetis=1 --with-parmetis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/parmetis-4.0.3-ilq6ip5ckg7shv5pbbqpnqoihqag4x4e --with-mumps=0 --with-trilinos=0 --with-fftw=1 --with-fftw-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/fftw-3.3.8-rfi7e56hwc7gcek5w5er3evkb7cefks2 --with-superlu_dist=0 --with-suitesparse=0 --with-zlib-include=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/include --with-zlib-lib="-L/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/lib -lz" --with-zlib=1 [17]PETSC ERROR: #1 VecView_MPI_HDF5() line 814 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [17]PETSC ERROR: #2 VecView_MPI() line 951 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [17]PETSC ERROR: #3 VecView() line 574 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/interface/vector.c [17]PETSC ERROR: #4 main() line 47 in ex10.c [17]PETSC ERROR: PETSc Option Table entries: [17]PETSC ERROR: -log_view [17]PETSC ERROR: -m 268435456 [17]PETSC ERROR: ----------------End of Error Message -------send entire error message to petsc-maint@mcs.anl.gov---------- inux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicpc --with-fc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiifort --FC_LINKER_FLAGS=-lintlc --with-precision=double --with-scalar-type=complex --with-shared-libraries=1 --with-debugging=0 --with-64-bit-indices=1 COPTFLAGS= FOPTFLAGS= CXXOPTFLAGS= --with-blaslapack-lib="/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_intel_lp64.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_sequential.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_core.so /lib64/libpthread.so /lib64/libm.so /lib64/libdl.so" --with-avx-512-kernels --with-memalign=64 --with-x=0 --with-clanguage=C --with-scalapack=0 --with-metis=1 --with-metis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/metis-5.1.0-2uxjs6gihdopyqjjyapxloxmopt3fyuf --with-hdf5=1 --with-hdf5-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/hdf5-1.10.5-4l2oqer7h7evmjcweba5iym767fnvn4g --with-hypre=0 --with-parmetis=1 --with-parmetis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/parmetis-4.0.3-ilq6ip5ckg7shv5pbbqpnqoihqag4x4e --with-mumps=0 --with-trilinos=0 --with-fftw=1 --with-fftw-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/fftw-3.3.8-rfi7e56hwc7gcek5w5er3evkb7cefks2 --with-superlu_dist=0 --with-suitesparse=0 --with-zlib-include=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/include --with-zlib-lib="-L/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/lib -lz" --with-zlib=1 [18]PETSC ERROR: #1 VecView_MPI_HDF5() line 814 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [18]PETSC ERROR: #2 VecView_MPI() line 951 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [18]PETSC ERROR: #3 VecView() line 574 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/interface/vector.c [18]PETSC ERROR: #4 main() line 47 in ex10.c [18]PETSC ERROR: PETSc Option Table entries: [18]PETSC ERROR: -log_view [18]PETSC ERROR: -m 268435456 [18]PETSC ERROR: ----------------End of Error Message -------send entire error message to petsc-maint@mcs.anl.gov---------- inux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicpc --with-fc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiifort --FC_LINKER_FLAGS=-lintlc --with-precision=double --with-scalar-type=complex --with-shared-libraries=1 --with-debugging=0 --with-64-bit-indices=1 COPTFLAGS= FOPTFLAGS= CXXOPTFLAGS= --with-blaslapack-lib="/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_intel_lp64.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_sequential.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_core.so /lib64/libpthread.so /lib64/libm.so /lib64/libdl.so" --with-avx-512-kernels --with-memalign=64 --with-x=0 --with-clanguage=C --with-scalapack=0 --with-metis=1 --with-metis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/metis-5.1.0-2uxjs6gihdopyqjjyapxloxmopt3fyuf --with-hdf5=1 --with-hdf5-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/hdf5-1.10.5-4l2oqer7h7evmjcweba5iym767fnvn4g --with-hypre=0 --with-parmetis=1 --with-parmetis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/parmetis-4.0.3-ilq6ip5ckg7shv5pbbqpnqoihqag4x4e --with-mumps=0 --with-trilinos=0 --with-fftw=1 --with-fftw-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/fftw-3.3.8-rfi7e56hwc7gcek5w5er3evkb7cefks2 --with-superlu_dist=0 --with-suitesparse=0 --with-zlib-include=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/include --with-zlib-lib="-L/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/lib -lz" --with-zlib=1 [19]PETSC ERROR: #1 VecView_MPI_HDF5() line 814 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [19]PETSC ERROR: #2 VecView_MPI() line 951 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [19]PETSC ERROR: #3 VecView() line 574 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/interface/vector.c [19]PETSC ERROR: #4 main() line 47 in ex10.c [19]PETSC ERROR: PETSc Option Table entries: [19]PETSC ERROR: -log_view [19]PETSC ERROR: -m 268435456 [19]PETSC ERROR: ----------------End of Error Message -------send entire error message to petsc-maint@mcs.anl.gov---------- inux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicpc --with-fc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiifort --FC_LINKER_FLAGS=-lintlc --with-precision=double --with-scalar-type=complex --with-shared-libraries=1 --with-debugging=0 --with-64-bit-indices=1 COPTFLAGS= FOPTFLAGS= CXXOPTFLAGS= --with-blaslapack-lib="/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_intel_lp64.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_sequential.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_core.so /lib64/libpthread.so /lib64/libm.so /lib64/libdl.so" --with-avx-512-kernels --with-memalign=64 --with-x=0 --with-clanguage=C --with-scalapack=0 --with-metis=1 --with-metis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/metis-5.1.0-2uxjs6gihdopyqjjyapxloxmopt3fyuf --with-hdf5=1 --with-hdf5-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/hdf5-1.10.5-4l2oqer7h7evmjcweba5iym767fnvn4g --with-hypre=0 --with-parmetis=1 --with-parmetis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/parmetis-4.0.3-ilq6ip5ckg7shv5pbbqpnqoihqag4x4e --with-mumps=0 --with-trilinos=0 --with-fftw=1 --with-fftw-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/fftw-3.3.8-rfi7e56hwc7gcek5w5er3evkb7cefks2 --with-superlu_dist=0 --with-suitesparse=0 --with-zlib-include=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/include --with-zlib-lib="-L/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/lib -lz" --with-zlib=1 [20]PETSC ERROR: #1 VecView_MPI_HDF5() line 814 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [20]PETSC ERROR: #2 VecView_MPI() line 951 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [20]PETSC ERROR: #3 VecView() line 574 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/interface/vector.c [20]PETSC ERROR: #4 main() line 47 in ex10.c [20]PETSC ERROR: PETSc Option Table entries: [20]PETSC ERROR: -log_view [20]PETSC ERROR: -m 268435456 [20]PETSC ERROR: ----------------End of Error Message -------send entire error message to petsc-maint@mcs.anl.gov---------- application called MPI_Abort(MPI_COMM_WORLD, 76) - process 20 inux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicpc --with-fc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiifort --FC_LINKER_FLAGS=-lintlc --with-precision=double --with-scalar-type=complex --with-shared-libraries=1 --with-debugging=0 --with-64-bit-indices=1 COPTFLAGS= FOPTFLAGS= CXXOPTFLAGS= --with-blaslapack-lib="/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_intel_lp64.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_sequential.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_core.so /lib64/libpthread.so /lib64/libm.so /lib64/libdl.so" --with-avx-512-kernels --with-memalign=64 --with-x=0 --with-clanguage=C --with-scalapack=0 --with-metis=1 --with-metis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/metis-5.1.0-2uxjs6gihdopyqjjyapxloxmopt3fyuf --with-hdf5=1 --with-hdf5-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/hdf5-1.10.5-4l2oqer7h7evmjcweba5iym767fnvn4g --with-hypre=0 --with-parmetis=1 --with-parmetis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/parmetis-4.0.3-ilq6ip5ckg7shv5pbbqpnqoihqag4x4e --with-mumps=0 --with-trilinos=0 --with-fftw=1 --with-fftw-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/fftw-3.3.8-rfi7e56hwc7gcek5w5er3evkb7cefks2 --with-superlu_dist=0 --with-suitesparse=0 --with-zlib-include=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/include --with-zlib-lib="-L/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/lib -lz" --with-zlib=1 [21]PETSC ERROR: #1 VecView_MPI_HDF5() line 814 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [21]PETSC ERROR: #2 VecView_MPI() line 951 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [21]PETSC ERROR: #3 VecView() line 574 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/interface/vector.c [21]PETSC ERROR: #4 main() line 47 in ex10.c [21]PETSC ERROR: PETSc Option Table entries: [21]PETSC ERROR: -log_view [21]PETSC ERROR: -m 268435456 [21]PETSC ERROR: ----------------End of Error Message -------send entire error message to petsc-maint@mcs.anl.gov---------- application called MPI_Abort(MPI_COMM_WORLD, 76) - process 21 inux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicpc --with-fc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiifort --FC_LINKER_FLAGS=-lintlc --with-precision=double --with-scalar-type=complex --with-shared-libraries=1 --with-debugging=0 --with-64-bit-indices=1 COPTFLAGS= FOPTFLAGS= CXXOPTFLAGS= --with-blaslapack-lib="/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_intel_lp64.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_sequential.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_core.so /lib64/libpthread.so /lib64/libm.so /lib64/libdl.so" --with-avx-512-kernels --with-memalign=64 --with-x=0 --with-clanguage=C --with-scalapack=0 --with-metis=1 --with-metis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/metis-5.1.0-2uxjs6gihdopyqjjyapxloxmopt3fyuf --with-hdf5=1 --with-hdf5-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/hdf5-1.10.5-4l2oqer7h7evmjcweba5iym767fnvn4g --with-hypre=0 --with-parmetis=1 --with-parmetis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/parmetis-4.0.3-ilq6ip5ckg7shv5pbbqpnqoihqag4x4e --with-mumps=0 --with-trilinos=0 --with-fftw=1 --with-fftw-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/fftw-3.3.8-rfi7e56hwc7gcek5w5er3evkb7cefks2 --with-superlu_dist=0 --with-suitesparse=0 --with-zlib-include=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/include --with-zlib-lib="-L/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/lib -lz" --with-zlib=1 [22]PETSC ERROR: #1 VecView_MPI_HDF5() line 814 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [22]PETSC ERROR: #2 VecView_MPI() line 951 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [22]PETSC ERROR: #3 VecView() line 574 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/interface/vector.c [22]PETSC ERROR: #4 main() line 47 in ex10.c [22]PETSC ERROR: PETSc Option Table entries: [22]PETSC ERROR: -log_view [22]PETSC ERROR: -m 268435456 [22]PETSC ERROR: ----------------End of Error Message -------send entire error message to petsc-maint@mcs.anl.gov---------- application called MPI_Abort(MPI_COMM_WORLD, 76) - process 22 inux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicpc --with-fc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiifort --FC_LINKER_FLAGS=-lintlc --with-precision=double --with-scalar-type=complex --with-shared-libraries=1 --with-debugging=0 --with-64-bit-indices=1 COPTFLAGS= FOPTFLAGS= CXXOPTFLAGS= --with-blaslapack-lib="/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_intel_lp64.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_sequential.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_core.so /lib64/libpthread.so /lib64/libm.so /lib64/libdl.so" --with-avx-512-kernels --with-memalign=64 --with-x=0 --with-clanguage=C --with-scalapack=0 --with-metis=1 --with-metis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/metis-5.1.0-2uxjs6gihdopyqjjyapxloxmopt3fyuf --with-hdf5=1 --with-hdf5-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/hdf5-1.10.5-4l2oqer7h7evmjcweba5iym767fnvn4g --with-hypre=0 --with-parmetis=1 --with-parmetis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/parmetis-4.0.3-ilq6ip5ckg7shv5pbbqpnqoihqag4x4e --with-mumps=0 --with-trilinos=0 --with-fftw=1 --with-fftw-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/fftw-3.3.8-rfi7e56hwc7gcek5w5er3evkb7cefks2 --with-superlu_dist=0 --with-suitesparse=0 --with-zlib-include=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/include --with-zlib-lib="-L/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/lib -lz" --with-zlib=1 [23]PETSC ERROR: #1 VecView_MPI_HDF5() line 814 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [23]PETSC ERROR: #2 VecView_MPI() line 951 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [23]PETSC ERROR: #3 VecView() line 574 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/interface/vector.c [23]PETSC ERROR: #4 main() line 47 in ex10.c [23]PETSC ERROR: PETSc Option Table entries: [23]PETSC ERROR: -log_view [23]PETSC ERROR: -m 268435456 [23]PETSC ERROR: ----------------End of Error Message -------send entire error message to petsc-maint@mcs.anl.gov---------- application called MPI_Abort(MPI_COMM_WORLD, 76) - process 23 inux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicpc --with-fc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiifort --FC_LINKER_FLAGS=-lintlc --with-precision=double --with-scalar-type=complex --with-shared-libraries=1 --with-debugging=0 --with-64-bit-indices=1 COPTFLAGS= FOPTFLAGS= CXXOPTFLAGS= --with-blaslapack-lib="/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_intel_lp64.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_sequential.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_core.so /lib64/libpthread.so /lib64/libm.so /lib64/libdl.so" --with-avx-512-kernels --with-memalign=64 --with-x=0 --with-clanguage=C --with-scalapack=0 --with-metis=1 --with-metis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/metis-5.1.0-2uxjs6gihdopyqjjyapxloxmopt3fyuf --with-hdf5=1 --with-hdf5-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/hdf5-1.10.5-4l2oqer7h7evmjcweba5iym767fnvn4g --with-hypre=0 --with-parmetis=1 --with-parmetis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/parmetis-4.0.3-ilq6ip5ckg7shv5pbbqpnqoihqag4x4e --with-mumps=0 --with-trilinos=0 --with-fftw=1 --with-fftw-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/fftw-3.3.8-rfi7e56hwc7gcek5w5er3evkb7cefks2 --with-superlu_dist=0 --with-suitesparse=0 --with-zlib-include=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/include --with-zlib-lib="-L/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/lib -lz" --with-zlib=1 [24]PETSC ERROR: #1 VecView_MPI_HDF5() line 814 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [24]PETSC ERROR: #2 VecView_MPI() line 951 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [24]PETSC ERROR: #3 VecView() line 574 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/interface/vector.c [24]PETSC ERROR: #4 main() line 47 in ex10.c [24]PETSC ERROR: PETSc Option Table entries: [24]PETSC ERROR: -log_view [24]PETSC ERROR: -m 268435456 [24]PETSC ERROR: ----------------End of Error Message -------send entire error message to petsc-maint@mcs.anl.gov---------- application called MPI_Abort(MPI_COMM_WORLD, 76) - process 24 HDF5-DIAG: Error detected in HDF5 (1.10.5) MPI-process 25: #000: H5D.c line 145 in H5Dcreate2(): unable to create dataset major: Dataset minor: Unable to initialize object #001: H5Dint.c line 329 in H5D__create_named(): unable to create and link to dataset major: Dataset minor: Unable to initialize object #002: H5L.c line 1557 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1798 in H5L__create_real(): can't insert link major: Links minor: Unable to insert object #004: H5Gtraverse.c line 851 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 627 in H5G__traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1604 in H5L__link_cb(): unable to create object major: Links minor: Unable to initialize object #007: H5Oint.c line 2453 in H5O_obj_create(): unable to open object major: Object header minor: Can't open object #008: H5Doh.c line 300 in H5O__dset_create(): unable to create dataset major: Dataset minor: Unable to initialize object #009: H5Dint.c line 1274 in H5D__create(): unable to construct layout information major: Dataset minor: Unable to initialize object #010: H5Dchunk.c line 872 in H5D__chunk_construct(): unable to set chunk sizes major: Dataset minor: Bad value #011: H5Dchunk.c line 831 in H5D__chunk_set_sizes(): chunk size must be < 4GB major: Dataset minor: Unable to initialize object [25]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [25]PETSC ERROR: Error in external library [25]PETSC ERROR: Error in HDF5 call H5Dcreate2() Status -1 [25]PETSC ERROR: See https://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. [25]PETSC ERROR: Petsc Release Version 3.12.0, Sep, 29, 2019 [25]PETSC ERROR: ./ex10 on a named apsxrmd-0001 by sajid Fri Oct 11 15:23:48 2019 [25]PETSC ERROR: Configure options --prefix=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/petsc-3.12.0-dhpnwwpsdks6asnb4wjywjyms24dlmhl --with-ssl=0 --download-c2html=0 --download-sowing=0 --download-hwloc=0 CFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gcc" FFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gfortran" CXXFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/g++" --with-cc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicc --with-cxx=/blues/gpfs/home/software/spack-0.10.1/opt/spack/lHDF5-DIAG: Error detected in HDF5 (1.10.5) MPI-process 26: #000: H5D.c line 145 in H5Dcreate2(): unable to create dataset major: Dataset minor: Unable to initialize object #001: H5Dint.c line 329 in H5D__create_named(): unable to create and link to dataset major: Dataset minor: Unable to initialize object #002: H5L.c line 1557 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1798 in H5L__create_real(): can't insert link major: Links minor: Unable to insert object #004: H5Gtraverse.c line 851 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 627 in H5G__traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1604 in H5L__link_cb(): unable to create object major: Links minor: Unable to initialize object #007: H5Oint.c line 2453 in H5O_obj_create(): unable to open object major: Object header minor: Can't open object #008: H5Doh.c line 300 in H5O__dset_create(): unable to create dataset major: Dataset minor: Unable to initialize object #009: H5Dint.c line 1274 in H5D__create(): unable to construct layout information major: Dataset minor: Unable to initialize object #010: H5Dchunk.c line 872 in H5D__chunk_construct(): unable to set chunk sizes major: Dataset minor: Bad value #011: H5Dchunk.c line 831 in H5D__chunk_set_sizes(): chunk size must be < 4GB major: Dataset minor: Unable to initialize object [26]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [26]PETSC ERROR: Error in external library [26]PETSC ERROR: Error in HDF5 call H5Dcreate2() Status -1 [26]PETSC ERROR: See https://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. [26]PETSC ERROR: Petsc Release Version 3.12.0, Sep, 29, 2019 [26]PETSC ERROR: ./ex10 on a named apsxrmd-0001 by sajid Fri Oct 11 15:23:48 2019 [26]PETSC ERROR: Configure options --prefix=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/petsc-3.12.0-dhpnwwpsdks6asnb4wjywjyms24dlmhl --with-ssl=0 --download-c2html=0 --download-sowing=0 --download-hwloc=0 CFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gcc" FFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gfortran" CXXFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/g++" --with-cc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicc --with-cxx=/blues/gpfs/home/software/spack-0.10.1/opt/spack/lHDF5-DIAG: Error detected in HDF5 (1.10.5) MPI-process 27: #000: H5D.c line 145 in H5Dcreate2(): unable to create dataset major: Dataset minor: Unable to initialize object #001: H5Dint.c line 329 in H5D__create_named(): unable to create and link to dataset major: Dataset minor: Unable to initialize object #002: H5L.c line 1557 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1798 in H5L__create_real(): can't insert link major: Links minor: Unable to insert object #004: H5Gtraverse.c line 851 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 627 in H5G__traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1604 in H5L__link_cb(): unable to create object major: Links minor: Unable to initialize object #007: H5Oint.c line 2453 in H5O_obj_create(): unable to open object major: Object header minor: Can't open object #008: H5Doh.c line 300 in H5O__dset_create(): unable to create dataset major: Dataset minor: Unable to initialize object #009: H5Dint.c line 1274 in H5D__create(): unable to construct layout information major: Dataset minor: Unable to initialize object #010: H5Dchunk.c line 872 in H5D__chunk_construct(): unable to set chunk sizes major: Dataset minor: Bad value #011: H5Dchunk.c line 831 in H5D__chunk_set_sizes(): chunk size must be < 4GB major: Dataset minor: Unable to initialize object [27]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [27]PETSC ERROR: Error in external library [27]PETSC ERROR: Error in HDF5 call H5Dcreate2() Status -1 [27]PETSC ERROR: See https://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. [27]PETSC ERROR: Petsc Release Version 3.12.0, Sep, 29, 2019 [27]PETSC ERROR: ./ex10 on a named apsxrmd-0001 by sajid Fri Oct 11 15:23:48 2019 [27]PETSC ERROR: Configure options --prefix=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/petsc-3.12.0-dhpnwwpsdks6asnb4wjywjyms24dlmhl --with-ssl=0 --download-c2html=0 --download-sowing=0 --download-hwloc=0 CFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gcc" FFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gfortran" CXXFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/g++" --with-cc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicc --with-cxx=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicpc --with-fc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiifort --FC_LINKER_FLAGS=-lintlc --with-precision=double --with-scalar-type=complex --with-shared-libraries=1 --with-debugging=0 --with-64-bit-indices=1 COPTFLAGS= FOPTFLAGS= CXXOPTFLAGS= --with-blaslapack-lib="/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_intel_lp64.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_sequential.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_core.so /lib64/libpthread.so /lib64/libm.so /lib64/libdl.so" --with-avx-512-kernels --with-memalign=64 --with-x=0 --with-clanguage=C --with-scalapack=0 --with-metis=1 --with-metis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/metis-5.1.0-2uxjs6gihdopyqjjyapxloxmopt3fyuf --with-hdf5=1 --with-hdf5-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/hdf5-1.10.5-4l2oqer7h7evmjcweba5iym767fnvn4g --with-hypre=0 --with-parmetis=1 --with-parmetis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/parmetis-4.0.3-ilq6ip5ckg7shv5pbbqpnqoihqag4x4e --with-mumps=0 --with-trilinos=0 --with-fftw=1 --with-fftw-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/fftw-3.3.8-rfi7e56hwc7gcek5w5er3evkb7cefks2 --with-superlu_dist=0 --with-suitesparse=0 --with-zlib-include=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/include --with-zlib-lib="-L/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/lib -lz" --with-zlib=1 [28]PETSC ERROR: #1 VecView_MPI_HDF5() line 814 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [28]PETSC ERROR: #2 VecView_MPI() line 951 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [28]PETSC ERROR: #3 VecView() line 574 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/interface/vector.c [28]PETSC ERROR: #4 main() line 47 in ex10.c [28]PETSC ERROR: PETSc Option Table entries: [28]PETSC ERROR: -log_view [28]PETSC ERROR: -m 268435456 [28]PETSC ERROR: ----------------End of Error Message -------send entire error message to petsc-maint@mcs.anl.gov---------- HDF5-DIAG: Error detected in HDF5 (1.10.5) MPI-process 29: #000: H5D.c line 145 in H5Dcreate2(): unable to create dataset major: Dataset minor: Unable to initialize object #001: H5Dint.c line 329 in H5D__create_named(): unable to create and link to dataset major: Dataset minor: Unable to initialize object #002: H5L.c line 1557 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1798 in H5L__create_real(): can't insert link major: Links minor: Unable to insert object #004: H5Gtraverse.c line 851 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 627 in H5G__traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1604 in H5L__link_cb(): unable to create object major: Links minor: Unable to initialize object #007: H5Oint.c line 2453 in H5O_obj_create(): unable to open object major: Object header minor: Can't open object #008: H5Doh.c line 300 in H5O__dset_create(): unable to create dataset major: Dataset minor: Unable to initialize object #009: H5Dint.c line 1274 in H5D__create(): unable to construct layout information major: Dataset minor: Unable to initialize object #010: H5Dchunk.c line 872 in H5D__chunk_construct(): unable to set chunk sizes major: Dataset minor: Bad value #011: H5Dchunk.c line 831 in H5D__chunk_set_sizes(): chunk size must be < 4GB major: Dataset minor: Unable to initialize object [29]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [29]PETSC ERROR: Error in external library [29]PETSC ERROR: Error in HDF5 call H5Dcreate2() Status -1 [29]PETSC ERROR: See https://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. [29]PETSC ERROR: Petsc Release Version 3.12.0, Sep, 29, 2019 [29]PETSC ERROR: ./ex10 on a named apsxrmd-0001 by sajid Fri Oct 11 15:23:48 2019 [29]PETSC ERROR: Configure options --prefix=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/petsc-3.12.0-dhpnwwpsdks6asnb4wjywjyms24dlmhl --with-ssl=0 --download-c2html=0 --download-sowing=0 --download-hwloc=0 CFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gcc" FFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gfortran" CXXFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/g++" --with-cc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicc --with-cxx=/blues/gpfs/home/software/spack-0.10.1/opt/spack/lHDF5-DIAG: Error detected in HDF5 (1.10.5) MPI-process 30: #000: H5D.c line 145 in H5Dcreate2(): unable to create dataset major: Dataset minor: Unable to initialize object #001: H5Dint.c line 329 in H5D__create_named(): unable to create and link to dataset major: Dataset minor: Unable to initialize object #002: H5L.c line 1557 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1798 in H5L__create_real(): can't insert link major: Links minor: Unable to insert object #004: H5Gtraverse.c line 851 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 627 in H5G__traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1604 in H5L__link_cb(): unable to create object major: Links minor: Unable to initialize object #007: H5Oint.c line 2453 in H5O_obj_create(): unable to open object major: Object header minor: Can't open object #008: H5Doh.c line 300 in H5O__dset_create(): unable to create dataset major: Dataset minor: Unable to initialize object #009: H5Dint.c line 1274 in H5D__create(): unable to construct layout information major: Dataset minor: Unable to initialize object #010: H5Dchunk.c line 872 in H5D__chunk_construct(): unable to set chunk sizes major: Dataset minor: Bad value #011: H5Dchunk.c line 831 in H5D__chunk_set_sizes(): chunk size must be < 4GB major: Dataset minor: Unable to initialize object [30]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [30]PETSC ERROR: Error in external library [30]PETSC ERROR: Error in HDF5 call H5Dcreate2() Status -1 [30]PETSC ERROR: See https://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. [30]PETSC ERROR: Petsc Release Version 3.12.0, Sep, 29, 2019 [30]PETSC ERROR: ./ex10 on a named apsxrmd-0001 by sajid Fri Oct 11 15:23:48 2019 [30]PETSC ERROR: Configure options --prefix=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/petsc-3.12.0-dhpnwwpsdks6asnb4wjywjyms24dlmhl --with-ssl=0 --download-c2html=0 --download-sowing=0 --download-hwloc=0 CFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gcc" FFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gfortran" CXXFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/g++" --with-cc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicc --with-cxx=/blues/gpfs/home/software/spack-0.10.1/opt/spack/lHDF5-DIAG: Error detected in HDF5 (1.10.5) MPI-process 31: #000: H5D.c line 145 in H5Dcreate2(): unable to create dataset major: Dataset minor: Unable to initialize object #001: H5Dint.c line 329 in H5D__create_named(): unable to create and link to dataset major: Dataset minor: Unable to initialize object #002: H5L.c line 1557 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1798 in H5L__create_real(): can't insert link major: Links minor: Unable to insert object #004: H5Gtraverse.c line 851 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 627 in H5G__traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1604 in H5L__link_cb(): unable to create object major: Links minor: Unable to initialize object #007: H5Oint.c line 2453 in H5O_obj_create(): unable to open object major: Object header minor: Can't open object #008: H5Doh.c line 300 in H5O__dset_create(): unable to create dataset major: Dataset minor: Unable to initialize object #009: H5Dint.c line 1274 in H5D__create(): unable to construct layout information major: Dataset minor: Unable to initialize object #010: H5Dchunk.c line 872 in H5D__chunk_construct(): unable to set chunk sizes major: Dataset minor: Bad value #011: H5Dchunk.c line 831 in H5D__chunk_set_sizes(): chunk size must be < 4GB major: Dataset minor: Unable to initialize object [31]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [31]PETSC ERROR: Error in external library [31]PETSC ERROR: Error in HDF5 call H5Dcreate2() Status -1 [31]PETSC ERROR: See https://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. [31]PETSC ERROR: Petsc Release Version 3.12.0, Sep, 29, 2019 [31]PETSC ERROR: ./ex10 on a named apsxrmd-0001 by sajid Fri Oct 11 15:23:48 2019 [31]PETSC ERROR: Configure options --prefix=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/petsc-3.12.0-dhpnwwpsdks6asnb4wjywjyms24dlmhl --with-ssl=0 --download-c2html=0 --download-sowing=0 --download-hwloc=0 CFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gcc" FFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gfortran" CXXFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/g++" --with-cc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicc --with-cxx=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicpc --with-fc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiifort --FC_LINKER_FLAGS=-lintlc --with-precision=double --with-scalar-type=complex --with-shared-libraries=1 --with-debugging=0 --with-64-bit-indices=1 COPTFLAGS= FOPTFLAGS= CXXOPTFLAGS= --with-blaslapack-lib="/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_intel_lp64.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_sequential.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_core.so /lib64/libpthread.so /lib64/libm.so /lib64/libdl.so" --with-avx-512-kernels --with-memalign=64 --with-x=0 --with-clanguage=C --with-scalapack=0 --with-metis=1 --with-metis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/metis-5.1.0-2uxjs6gihdopyqjjyapxloxmopt3fyuf --with-hdf5=1 --with-hdf5-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/hdf5-1.10.5-4l2oqer7h7evmjcweba5iym767fnvn4g --with-hypre=0 --with-parmetis=1 --with-parmetis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/parmetis-4.0.3-ilq6ip5ckg7shv5pbbqpnqoihqag4x4e --with-mumps=0 --with-trilinos=0 --with-fftw=1 --with-fftw-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/fftw-3.3.8-rfi7e56hwc7gcek5w5er3evkb7cefks2 --with-superlu_dist=0 --with-suitesparse=0 --with-zlib-include=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/include --with-zlib-lib="-L/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/lib -lz" --with-zlib=1 [32]PETSC ERROR: #1 VecView_MPI_HDF5() line 814 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [32]PETSC ERROR: #2 VecView_MPI() line 951 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [32]PETSC ERROR: #3 VecView() line 574 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/interface/vector.c [32]PETSC ERROR: #4 main() line 47 in ex10.c [32]PETSC ERROR: PETSc Option Table entries: [32]PETSC ERROR: -log_view [32]PETSC ERROR: -m 268435456 [32]PETSC ERROR: ----------------End of Error Message -------send entire error message to petsc-maint@mcs.anl.gov---------- application called MPI_Abort(MPI_COMM_WORLD, 76) - process 32 inux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicpc --with-fc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiifort --FC_LINKER_FLAGS=-lintlc --with-precision=double --with-scalar-type=complex --with-shared-libraries=1 --with-debugging=0 --with-64-bit-indices=1 COPTFLAGS= FOPTFLAGS= CXXOPTFLAGS= --with-blaslapack-lib="/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_intel_lp64.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_sequential.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_core.so /lib64/libpthread.so /lib64/libm.so /lib64/libdl.so" --with-avx-512-kernels --with-memalign=64 --with-x=0 --with-clanguage=C --with-scalapack=0 --with-metis=1 --with-metis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/metis-5.1.0-2uxjs6gihdopyqjjyapxloxmopt3fyuf --with-hdf5=1 --with-hdf5-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/hdf5-1.10.5-4l2oqer7h7evmjcweba5iym767fnvn4g --with-hypre=0 --with-parmetis=1 --with-parmetis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/parmetis-4.0.3-ilq6ip5ckg7shv5pbbqpnqoihqag4x4e --with-mumps=0 --with-trilinos=0 --with-fftw=1 --with-fftw-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/fftw-3.3.8-rfi7e56hwc7gcek5w5er3evkb7cefks2 --with-superlu_dist=0 --with-suitesparse=0 --with-zlib-include=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/include --with-zlib-lib="-L/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/lib -lz" --with-zlib=1 [33]PETSC ERROR: #1 VecView_MPI_HDF5() line 814 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [33]PETSC ERROR: #2 VecView_MPI() line 951 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [33]PETSC ERROR: #3 VecView() line 574 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/interface/vector.c [33]PETSC ERROR: #4 main() line 47 in ex10.c [33]PETSC ERROR: PETSc Option Table entries: [33]PETSC ERROR: -log_view [33]PETSC ERROR: -m 268435456 [33]PETSC ERROR: ----------------End of Error Message -------send entire error message to petsc-maint@mcs.anl.gov---------- application called MPI_Abort(MPI_COMM_WORLD, 76) - process 33 inux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicpc --with-fc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiifort --FC_LINKER_FLAGS=-lintlc --with-precision=double --with-scalar-type=complex --with-shared-libraries=1 --with-debugging=0 --with-64-bit-indices=1 COPTFLAGS= FOPTFLAGS= CXXOPTFLAGS= --with-blaslapack-lib="/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_intel_lp64.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_sequential.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_core.so /lib64/libpthread.so /lib64/libm.so /lib64/libdl.so" --with-avx-512-kernels --with-memalign=64 --with-x=0 --with-clanguage=C --with-scalapack=0 --with-metis=1 --with-metis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/metis-5.1.0-2uxjs6gihdopyqjjyapxloxmopt3fyuf --with-hdf5=1 --with-hdf5-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/hdf5-1.10.5-4l2oqer7h7evmjcweba5iym767fnvn4g --with-hypre=0 --with-parmetis=1 --with-parmetis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/parmetis-4.0.3-ilq6ip5ckg7shv5pbbqpnqoihqag4x4e --with-mumps=0 --with-trilinos=0 --with-fftw=1 --with-fftw-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/fftw-3.3.8-rfi7e56hwc7gcek5w5er3evkb7cefks2 --with-superlu_dist=0 --with-suitesparse=0 --with-zlib-include=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/include --with-zlib-lib="-L/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/lib -lz" --with-zlib=1 [34]PETSC ERROR: #1 VecView_MPI_HDF5() line 814 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [34]PETSC ERROR: #2 VecView_MPI() line 951 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [34]PETSC ERROR: #3 VecView() line 574 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/interface/vector.c [34]PETSC ERROR: #4 main() line 47 in ex10.c [34]PETSC ERROR: PETSc Option Table entries: [34]PETSC ERROR: -log_view [34]PETSC ERROR: -m 268435456 [34]PETSC ERROR: ----------------End of Error Message -------send entire error message to petsc-maint@mcs.anl.gov---------- application called MPI_Abort(MPI_COMM_WORLD, 76) - process 34 HDF5-DIAG: Error detected in HDF5 (1.10.5) MPI-process 35: #000: H5D.c line 145 in H5Dcreate2(): unable to create dataset major: Dataset minor: Unable to initialize object #001: H5Dint.c line 329 in H5D__create_named(): unable to create and link to dataset major: Dataset minor: Unable to initialize object #002: H5L.c line 1557 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1798 in H5L__create_real(): can't insert link major: Links minor: Unable to insert object #004: H5Gtraverse.c line 851 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 627 in H5G__traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1604 in H5L__link_cb(): unable to create object major: Links minor: Unable to initialize object #007: H5Oint.c line 2453 in H5O_obj_create(): unable to open object major: Object header minor: Can't open object #008: H5Doh.c line 300 in H5O__dset_create(): unable to create dataset major: Dataset minor: Unable to initialize object #009: H5Dint.c line 1274 in H5D__create(): unable to construct layout information major: Dataset minor: Unable to initialize object #010: H5Dchunk.c line 872 in H5D__chunk_construct(): unable to set chunk sizes major: Dataset minor: Bad value #011: H5Dchunk.c line 831 in H5D__chunk_set_sizes(): chunk size must be < 4GB major: Dataset minor: Unable to initialize object [35]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [35]PETSC ERROR: Error in external library [35]PETSC ERROR: Error in HDF5 call H5Dcreate2() Status -1 [35]PETSC ERROR: See https://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. [35]PETSC ERROR: Petsc Release Version 3.12.0, Sep, 29, 2019 [35]PETSC ERROR: ./ex10 on a named apsxrmd-0001 by sajid Fri Oct 11 15:23:48 2019 [35]PETSC ERROR: Configure options --prefix=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/petsc-3.12.0-dhpnwwpsdks6asnb4wjywjyms24dlmhl --with-ssl=0 --download-c2html=0 --download-sowing=0 --download-hwloc=0 CFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gcc" FFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gfortran" CXXFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/g++" --with-cc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicc --with-cxx=/blues/gpfs/home/software/spack-0.10.1/opt/spack/lHDF5-DIAG: Error detected in HDF5 (1.10.5) MPI-process 36: #000: H5D.c line 145 in H5Dcreate2(): unable to create dataset major: Dataset minor: Unable to initialize object #001: H5Dint.c line 329 in H5D__create_named(): unable to create and link to dataset major: Dataset minor: Unable to initialize object #002: H5L.c line 1557 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1798 in H5L__create_real(): can't insert link major: Links minor: Unable to insert object #004: H5Gtraverse.c line 851 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 627 in H5G__traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1604 in H5L__link_cb(): unable to create object major: Links minor: Unable to initialize object #007: H5Oint.c line 2453 in H5O_obj_create(): unable to open object major: Object header minor: Can't open object #008: H5Doh.c line 300 in H5O__dset_create(): unable to create dataset major: Dataset minor: Unable to initialize object #009: H5Dint.c line 1274 in H5D__create(): unable to construct layout information major: Dataset minor: Unable to initialize object #010: H5Dchunk.c line 872 in H5D__chunk_construct(): unable to set chunk sizes major: Dataset minor: Bad value #011: H5Dchunk.c line 831 in H5D__chunk_set_sizes(): chunk size must be < 4GB major: Dataset minor: Unable to initialize object [36]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [36]PETSC ERROR: Error in external library [36]PETSC ERROR: Error in HDF5 call H5Dcreate2() Status -1 [36]PETSC ERROR: See https://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. [36]PETSC ERROR: Petsc Release Version 3.12.0, Sep, 29, 2019 [36]PETSC ERROR: ./ex10 on a named apsxrmd-0001 by sajid Fri Oct 11 15:23:48 2019 [36]PETSC ERROR: Configure options --prefix=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/petsc-3.12.0-dhpnwwpsdks6asnb4wjywjyms24dlmhl --with-ssl=0 --download-c2html=0 --download-sowing=0 --download-hwloc=0 CFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gcc" FFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gfortran" CXXFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/g++" --with-cc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicc --with-cxx=/blues/gpfs/home/software/spack-0.10.1/opt/spack/lHDF5-DIAG: Error detected in HDF5 (1.10.5) MPI-process 37: #000: H5D.c line 145 in H5Dcreate2(): unable to create dataset major: Dataset minor: Unable to initialize object #001: H5Dint.c line 329 in H5D__create_named(): unable to create and link to dataset major: Dataset minor: Unable to initialize object #002: H5L.c line 1557 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1798 in H5L__create_real(): can't insert link major: Links minor: Unable to insert object #004: H5Gtraverse.c line 851 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 627 in H5G__traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1604 in H5L__link_cb(): unable to create object major: Links minor: Unable to initialize object #007: H5Oint.c line 2453 in H5O_obj_create(): unable to open object major: Object header minor: Can't open object #008: H5Doh.c line 300 in H5O__dset_create(): unable to create dataset major: Dataset minor: Unable to initialize object #009: H5Dint.c line 1274 in H5D__create(): unable to construct layout information major: Dataset minor: Unable to initialize object #010: H5Dchunk.c line 872 in H5D__chunk_construct(): unable to set chunk sizes major: Dataset minor: Bad value #011: H5Dchunk.c line 831 in H5D__chunk_set_sizes(): chunk size must be < 4GB major: Dataset minor: Unable to initialize object [37]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [37]PETSC ERROR: Error in external library [37]PETSC ERROR: Error in HDF5 call H5Dcreate2() Status -1 [37]PETSC ERROR: See https://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. [37]PETSC ERROR: Petsc Release Version 3.12.0, Sep, 29, 2019 [37]PETSC ERROR: ./ex10 on a named apsxrmd-0001 by sajid Fri Oct 11 15:23:48 2019 [37]PETSC ERROR: Configure options --prefix=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/petsc-3.12.0-dhpnwwpsdks6asnb4wjywjyms24dlmhl --with-ssl=0 --download-c2html=0 --download-sowing=0 --download-hwloc=0 CFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gcc" FFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gfortran" CXXFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/g++" --with-cc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicc --with-cxx=/blues/gpfs/home/software/spack-0.10.1/opt/spack/lHDF5-DIAG: Error detected in HDF5 (1.10.5) MPI-process 38: #000: H5D.c line 145 in H5Dcreate2(): unable to create dataset major: Dataset minor: Unable to initialize object #001: H5Dint.c line 329 in H5D__create_named(): unable to create and link to dataset major: Dataset minor: Unable to initialize object #002: H5L.c line 1557 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1798 in H5L__create_real(): can't insert link major: Links minor: Unable to insert object #004: H5Gtraverse.c line 851 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 627 in H5G__traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1604 in H5L__link_cb(): unable to create object major: Links minor: Unable to initialize object #007: H5Oint.c line 2453 in H5O_obj_create(): unable to open object major: Object header minor: Can't open object #008: H5Doh.c line 300 in H5O__dset_create(): unable to create dataset major: Dataset minor: Unable to initialize object #009: H5Dint.c line 1274 in H5D__create(): unable to construct layout information major: Dataset minor: Unable to initialize object #010: H5Dchunk.c line 872 in H5D__chunk_construct(): unable to set chunk sizes major: Dataset minor: Bad value #011: H5Dchunk.c line 831 in H5D__chunk_set_sizes(): chunk size must be < 4GB major: Dataset minor: Unable to initialize object [38]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [38]PETSC ERROR: Error in external library [38]PETSC ERROR: Error in HDF5 call H5Dcreate2() Status -1 [38]PETSC ERROR: See https://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. [38]PETSC ERROR: Petsc Release Version 3.12.0, Sep, 29, 2019 [38]PETSC ERROR: ./ex10 on a named apsxrmd-0001 by sajid Fri Oct 11 15:23:48 2019 [38]PETSC ERROR: Configure options --prefix=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/petsc-3.12.0-dhpnwwpsdks6asnb4wjywjyms24dlmhl --with-ssl=0 --download-c2html=0 --download-sowing=0 --download-hwloc=0 CFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gcc" FFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gfortran" CXXFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/g++" --with-cc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicc --with-cxx=/blues/gpfs/home/software/spack-0.10.1/opt/spack/lHDF5-DIAG: Error detected in HDF5 (1.10.5) MPI-process 39: #000: H5D.c line 145 in H5Dcreate2(): unable to create dataset major: Dataset minor: Unable to initialize object #001: H5Dint.c line 329 in H5D__create_named(): unable to create and link to dataset major: Dataset minor: Unable to initialize object #002: H5L.c line 1557 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1798 in H5L__create_real(): can't insert link major: Links minor: Unable to insert object #004: H5Gtraverse.c line 851 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 627 in H5G__traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1604 in H5L__link_cb(): unable to create object major: Links minor: Unable to initialize object #007: H5Oint.c line 2453 in H5O_obj_create(): unable to open object major: Object header minor: Can't open object #008: H5Doh.c line 300 in H5O__dset_create(): unable to create dataset major: Dataset minor: Unable to initialize object #009: H5Dint.c line 1274 in H5D__create(): unable to construct layout information major: Dataset minor: Unable to initialize object #010: H5Dchunk.c line 872 in H5D__chunk_construct(): unable to set chunk sizes major: Dataset minor: Bad value #011: H5Dchunk.c line 831 in H5D__chunk_set_sizes(): chunk size must be < 4GB major: Dataset minor: Unable to initialize object [39]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [39]PETSC ERROR: Error in external library [39]PETSC ERROR: Error in HDF5 call H5Dcreate2() Status -1 [39]PETSC ERROR: See https://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. [39]PETSC ERROR: Petsc Release Version 3.12.0, Sep, 29, 2019 [39]PETSC ERROR: ./ex10 on a named apsxrmd-0001 by sajid Fri Oct 11 15:23:48 2019 [39]PETSC ERROR: Configure options --prefix=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/petsc-3.12.0-dhpnwwpsdks6asnb4wjywjyms24dlmhl --with-ssl=0 --download-c2html=0 --download-sowing=0 --download-hwloc=0 CFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gcc" FFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gfortran" CXXFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/g++" --with-cc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicc --with-cxx=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicpc --with-fc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiifort --FC_LINKER_FLAGS=-lintlc --with-precision=double --with-scalar-type=complex --with-shared-libraries=1 --with-debugging=0 --with-64-bit-indices=1 COPTFLAGS= FOPTFLAGS= CXXOPTFLAGS= --with-blaslapack-lib="/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_intel_lp64.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_sequential.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_core.so /lib64/libpthread.so /lib64/libm.so /lib64/libdl.so" --with-avx-512-kernels --with-memalign=64 --with-x=0 --with-clanguage=C --with-scalapack=0 --with-metis=1 --with-metis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/metis-5.1.0-2uxjs6gihdopyqjjyapxloxmopt3fyuf --with-hdf5=1 --with-hdf5-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/hdf5-1.10.5-4l2oqer7h7evmjcweba5iym767fnvn4g --with-hypre=0 --with-parmetis=1 --with-parmetis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/parmetis-4.0.3-ilq6ip5ckg7shv5pbbqpnqoihqag4x4e --with-mumps=0 --with-trilinos=0 --with-fftw=1 --with-fftw-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/fftw-3.3.8-rfi7e56hwc7gcek5w5er3evkb7cefks2 --with-superlu_dist=0 --with-suitesparse=0 --with-zlib-include=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/include --with-zlib-lib="-L/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/lib -lz" --with-zlib=1 [40]PETSC ERROR: #1 VecView_MPI_HDF5() line 814 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [40]PETSC ERROR: #2 VecView_MPI() line 951 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [40]PETSC ERROR: #3 VecView() line 574 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/interface/vector.c [40]PETSC ERROR: #4 main() line 47 in ex10.c [40]PETSC ERROR: PETSc Option Table entries: [40]PETSC ERROR: -log_view [40]PETSC ERROR: -m 268435456 [40]PETSC ERROR: ----------------End of Error Message -------send entire error message to petsc-maint@mcs.anl.gov---------- application called MPI_Abort(MPI_COMM_WORLD, 76) - process 40 HDF5-DIAG: Error detected in HDF5 (1.10.5) MPI-process 41: #000: H5D.c line 145 in H5Dcreate2(): unable to create dataset major: Dataset minor: Unable to initialize object #001: H5Dint.c line 329 in H5D__create_named(): unable to create and link to dataset major: Dataset minor: Unable to initialize object #002: H5L.c line 1557 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1798 in H5L__create_real(): can't insert link major: Links minor: Unable to insert object #004: H5Gtraverse.c line 851 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 627 in H5G__traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1604 in H5L__link_cb(): unable to create object major: Links minor: Unable to initialize object #007: H5Oint.c line 2453 in H5O_obj_create(): unable to open object major: Object header minor: Can't open object #008: H5Doh.c line 300 in H5O__dset_create(): unable to create dataset major: Dataset minor: Unable to initialize object #009: H5Dint.c line 1274 in H5D__create(): unable to construct layout information major: Dataset minor: Unable to initialize object #010: H5Dchunk.c line 872 in H5D__chunk_construct(): unable to set chunk sizes major: Dataset minor: Bad value #011: H5Dchunk.c line 831 in H5D__chunk_set_sizes(): chunk size must be < 4GB major: Dataset minor: Unable to initialize object [41]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [41]PETSC ERROR: Error in external library [41]PETSC ERROR: Error in HDF5 call H5Dcreate2() Status -1 [41]PETSC ERROR: See https://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. [41]PETSC ERROR: Petsc Release Version 3.12.0, Sep, 29, 2019 [41]PETSC ERROR: ./ex10 on a named apsxrmd-0001 by sajid Fri Oct 11 15:23:48 2019 [41]PETSC ERROR: Configure options --prefix=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/petsc-3.12.0-dhpnwwpsdks6asnb4wjywjyms24dlmhl --with-ssl=0 --download-c2html=0 --download-sowing=0 --download-hwloc=0 CFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gcc" FFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gfortran" CXXFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/g++" --with-cc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicc --with-cxx=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicpc --with-fc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiifort --FC_LINKER_FLAGS=-lintlc --with-precision=double --with-scalar-type=complex --with-shared-libraries=1 --with-debugging=0 --with-64-bit-indices=1 COPTFLAGS= FOPTFLAGS= CXXOPTFLAGS= --with-blaslapack-lib="/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_intel_lp64.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_sequential.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_core.so /lib64/libpthread.so /lib64/libm.so /lib64/libdl.so" --with-avx-512-kernels --with-memalign=64 --with-x=0 --with-clanguage=C --with-scalapack=0 --with-metis=1 --with-metis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/metis-5.1.0-2uxjs6gihdopyqjjyapxloxmopt3fyuf --with-hdf5=1 --with-hdf5-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/hdf5-1.10.5-4l2oqer7h7evmjcweba5iym767fnvn4g --with-hypre=0 --with-parmetis=1 --with-parmetis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/parmetis-4.0.3-ilq6ip5ckg7shv5pbbqpnqoihqag4x4e --with-mumps=0 --with-trilinos=0 --with-fftw=1 --with-fftw-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/fftw-3.3.8-rfi7e56hwc7gcek5w5er3evkb7cefks2 --with-superlu_dist=0 --with-suitesparse=0 --with-zlib-include=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/include --with-zlib-lib="-L/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/lib -lz" --with-zlib=1 [42]PETSC ERROR: #1 VecView_MPI_HDF5() line 814 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [42]PETSC ERROR: #2 VecView_MPI() line 951 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [42]PETSC ERROR: #3 VecView() line 574 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/interface/vector.c [42]PETSC ERROR: #4 main() line 47 in ex10.c [42]PETSC ERROR: PETSc Option Table entries: [42]PETSC ERROR: -log_view [42]PETSC ERROR: -m 268435456 [42]PETSC ERROR: ----------------End of Error Message -------send entire error message to petsc-maint@mcs.anl.gov---------- application called MPI_Abort(MPI_COMM_WORLD, 76) - process 42 HDF5-DIAG: Error detected in HDF5 (1.10.5) MPI-process 43: #000: H5D.c line 145 in H5Dcreate2(): unable to create dataset major: Dataset minor: Unable to initialize object #001: H5Dint.c line 329 in H5D__create_named(): unable to create and link to dataset major: Dataset minor: Unable to initialize object #002: H5L.c line 1557 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1798 in H5L__create_real(): can't insert link major: Links minor: Unable to insert object #004: H5Gtraverse.c line 851 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 627 in H5G__traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1604 in H5L__link_cb(): unable to create object major: Links minor: Unable to initialize object #007: H5Oint.c line 2453 in H5O_obj_create(): unable to open object major: Object header minor: Can't open object #008: H5Doh.c line 300 in H5O__dset_create(): unable to create dataset major: Dataset minor: Unable to initialize object #009: H5Dint.c line 1274 in H5D__create(): unable to construct layout information major: Dataset minor: Unable to initialize object #010: H5Dchunk.c line 872 in H5D__chunk_construct(): unable to set chunk sizes major: Dataset minor: Bad value #011: H5Dchunk.c line 831 in H5D__chunk_set_sizes(): chunk size must be < 4GB major: Dataset minor: Unable to initialize object [43]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [43]PETSC ERROR: Error in external library [43]PETSC ERROR: Error in HDF5 call H5Dcreate2() Status -1 [43]PETSC ERROR: See https://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. [43]PETSC ERROR: Petsc Release Version 3.12.0, Sep, 29, 2019 [43]PETSC ERROR: ./ex10 on a named apsxrmd-0001 by sajid Fri Oct 11 15:23:48 2019 [43]PETSC ERROR: Configure options --prefix=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/petsc-3.12.0-dhpnwwpsdks6asnb4wjywjyms24dlmhl --with-ssl=0 --download-c2html=0 --download-sowing=0 --download-hwloc=0 CFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gcc" FFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gfortran" CXXFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/g++" --with-cc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicc --with-cxx=/blues/gpfs/home/software/spack-0.10.1/opt/spack/lHDF5-DIAG: Error detected in HDF5 (1.10.5) MPI-process 44: #000: H5D.c line 145 in H5Dcreate2(): unable to create dataset major: Dataset minor: Unable to initialize object #001: H5Dint.c line 329 in H5D__create_named(): unable to create and link to dataset major: Dataset minor: Unable to initialize object #002: H5L.c line 1557 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1798 in H5L__create_real(): can't insert link major: Links minor: Unable to insert object #004: H5Gtraverse.c line 851 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 627 in H5G__traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1604 in H5L__link_cb(): unable to create object major: Links minor: Unable to initialize object #007: H5Oint.c line 2453 in H5O_obj_create(): unable to open object major: Object header minor: Can't open object #008: H5Doh.c line 300 in H5O__dset_create(): unable to create dataset major: Dataset minor: Unable to initialize object #009: H5Dint.c line 1274 in H5D__create(): unable to construct layout information major: Dataset minor: Unable to initialize object #010: H5Dchunk.c line 872 in H5D__chunk_construct(): unable to set chunk sizes major: Dataset minor: Bad value #011: H5Dchunk.c line 831 in H5D__chunk_set_sizes(): chunk size must be < 4GB major: Dataset minor: Unable to initialize object [44]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [44]PETSC ERROR: Error in external library [44]PETSC ERROR: Error in HDF5 call H5Dcreate2() Status -1 [44]PETSC ERROR: See https://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. [44]PETSC ERROR: Petsc Release Version 3.12.0, Sep, 29, 2019 [44]PETSC ERROR: ./ex10 on a named apsxrmd-0001 by sajid Fri Oct 11 15:23:48 2019 [44]PETSC ERROR: Configure options --prefix=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/petsc-3.12.0-dhpnwwpsdks6asnb4wjywjyms24dlmhl --with-ssl=0 --download-c2html=0 --download-sowing=0 --download-hwloc=0 CFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gcc" FFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gfortran" CXXFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/g++" --with-cc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicc --with-cxx=/blues/gpfs/home/software/spack-0.10.1/opt/spack/lHDF5-DIAG: Error detected in HDF5 (1.10.5) MPI-process 45: #000: H5D.c line 145 in H5Dcreate2(): unable to create dataset major: Dataset minor: Unable to initialize object #001: H5Dint.c line 329 in H5D__create_named(): unable to create and link to dataset major: Dataset minor: Unable to initialize object #002: H5L.c line 1557 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1798 in H5L__create_real(): can't insert link major: Links minor: Unable to insert object #004: H5Gtraverse.c line 851 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 627 in H5G__traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1604 in H5L__link_cb(): unable to create object major: Links minor: Unable to initialize object #007: H5Oint.c line 2453 in H5O_obj_create(): unable to open object major: Object header minor: Can't open object #008: H5Doh.c line 300 in H5O__dset_create(): unable to create dataset major: Dataset minor: Unable to initialize object #009: H5Dint.c line 1274 in H5D__create(): unable to construct layout information major: Dataset minor: Unable to initialize object #010: H5Dchunk.c line 872 in H5D__chunk_construct(): unable to set chunk sizes major: Dataset minor: Bad value #011: H5Dchunk.c line 831 in H5D__chunk_set_sizes(): chunk size must be < 4GB major: Dataset minor: Unable to initialize object [45]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [45]PETSC ERROR: Error in external library [45]PETSC ERROR: Error in HDF5 call H5Dcreate2() Status -1 [45]PETSC ERROR: See https://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. [45]PETSC ERROR: Petsc Release Version 3.12.0, Sep, 29, 2019 [45]PETSC ERROR: ./ex10 on a named apsxrmd-0001 by sajid Fri Oct 11 15:23:48 2019 [45]PETSC ERROR: Configure options --prefix=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/petsc-3.12.0-dhpnwwpsdks6asnb4wjywjyms24dlmhl --with-ssl=0 --download-c2html=0 --download-sowing=0 --download-hwloc=0 CFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gcc" FFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gfortran" CXXFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/g++" --with-cc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicc --with-cxx=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicpc --with-fc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiifort --FC_LINKER_FLAGS=-lintlc --with-precision=double --with-scalar-type=complex --with-shared-libraries=1 --with-debugging=0 --with-64-bit-indices=1 COPTFLAGS= FOPTFLAGS= CXXOPTFLAGS= --with-blaslapack-lib="/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_intel_lp64.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_sequential.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_core.so /lib64/libpthread.so /lib64/libm.so /lib64/libdl.so" --with-avx-512-kernels --with-memalign=64 --with-x=0 --with-clanguage=C --with-scalapack=0 --with-metis=1 --with-metis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/metis-5.1.0-2uxjs6gihdopyqjjyapxloxmopt3fyuf --with-hdf5=1 --with-hdf5-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/hdf5-1.10.5-4l2oqer7h7evmjcweba5iym767fnvn4g --with-hypre=0 --with-parmetis=1 --with-parmetis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/parmetis-4.0.3-ilq6ip5ckg7shv5pbbqpnqoihqag4x4e --with-mumps=0 --with-trilinos=0 --with-fftw=1 --with-fftw-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/fftw-3.3.8-rfi7e56hwc7gcek5w5er3evkb7cefks2 --with-superlu_dist=0 --with-suitesparse=0 --with-zlib-include=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/include --with-zlib-lib="-L/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/lib -lz" --with-zlib=1 [46]PETSC ERROR: #1 VecView_MPI_HDF5() line 814 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [46]PETSC ERROR: #2 VecView_MPI() line 951 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [46]PETSC ERROR: #3 VecView() line 574 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/interface/vector.c [46]PETSC ERROR: #4 main() line 47 in ex10.c [46]PETSC ERROR: PETSc Option Table entries: [46]PETSC ERROR: -log_view [46]PETSC ERROR: -m 268435456 [46]PETSC ERROR: ----------------End of Error Message -------send entire error message to petsc-maint@mcs.anl.gov---------- application called MPI_Abort(MPI_COMM_WORLD, 76) - process 46 HDF5-DIAG: Error detected in HDF5 (1.10.5) MPI-process 47: #000: H5D.c line 145 in H5Dcreate2(): unable to create dataset major: Dataset minor: Unable to initialize object #001: H5Dint.c line 329 in H5D__create_named(): unable to create and link to dataset major: Dataset minor: Unable to initialize object #002: H5L.c line 1557 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1798 in H5L__create_real(): can't insert link major: Links minor: Unable to insert object #004: H5Gtraverse.c line 851 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 627 in H5G__traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1604 in H5L__link_cb(): unable to create object major: Links minor: Unable to initialize object #007: H5Oint.c line 2453 in H5O_obj_create(): unable to open object major: Object header minor: Can't open object #008: H5Doh.c line 300 in H5O__dset_create(): unable to create dataset major: Dataset minor: Unable to initialize object #009: H5Dint.c line 1274 in H5D__create(): unable to construct layout information major: Dataset minor: Unable to initialize object #010: H5Dchunk.c line 872 in H5D__chunk_construct(): unable to set chunk sizes major: Dataset minor: Bad value #011: H5Dchunk.c line 831 in H5D__chunk_set_sizes(): chunk size must be < 4GB major: Dataset minor: Unable to initialize object [47]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [47]PETSC ERROR: Error in external library [47]PETSC ERROR: Error in HDF5 call H5Dcreate2() Status -1 [47]PETSC ERROR: See https://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. [47]PETSC ERROR: Petsc Release Version 3.12.0, Sep, 29, 2019 [47]PETSC ERROR: ./ex10 on a named apsxrmd-0001 by sajid Fri Oct 11 15:23:48 2019 [47]PETSC ERROR: Configure options --prefix=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/petsc-3.12.0-dhpnwwpsdks6asnb4wjywjyms24dlmhl --with-ssl=0 --download-c2html=0 --download-sowing=0 --download-hwloc=0 CFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gcc" FFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gfortran" CXXFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/g++" --with-cc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicc --with-cxx=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicpc --with-fc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiifort --FC_LINKER_FLAGS=-lintlc --with-precision=double --with-scalar-type=complex --with-shared-libraries=1 --with-debugging=0 --with-64-bit-indices=1 COPTFLAGS= FOPTFLAGS= CXXOPTFLAGS= --with-blaslapack-lib="/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_intel_lp64.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_sequential.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_core.so /lib64/libpthread.so /lib64/libm.so /lib64/libdl.so" --with-avx-512-kernels --with-memalign=64 --with-x=0 --with-clanguage=C --with-scalapack=0 --with-metis=1 --with-metis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/metis-5.1.0-2uxjs6gihdopyqjjyapxloxmopt3fyuf --with-hdf5=1 --with-hdf5-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/hdf5-1.10.5-4l2oqer7h7evmjcweba5iym767fnvn4g --with-hypre=0 --with-parmetis=1 --with-parmetis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/parmetis-4.0.3-ilq6ip5ckg7shv5pbbqpnqoihqag4x4e --with-mumps=0 --with-trilinos=0 --with-fftw=1 --with-fftw-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/fftw-3.3.8-rfi7e56hwc7gcek5w5er3evkb7cefks2 --with-superlu_dist=0 --with-suitesparse=0 --with-zlib-include=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/include --with-zlib-lib="-L/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/lib -lz" --with-zlib=1 [48]PETSC ERROR: #1 VecView_MPI_HDF5() line 814 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [48]PETSC ERROR: #2 VecView_MPI() line 951 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [48]PETSC ERROR: #3 VecView() line 574 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/interface/vector.c [48]PETSC ERROR: #4 main() line 47 in ex10.c [48]PETSC ERROR: PETSc Option Table entries: [48]PETSC ERROR: -log_view [48]PETSC ERROR: -m 268435456 [48]PETSC ERROR: ----------------End of Error Message -------send entire error message to petsc-maint@mcs.anl.gov---------- application called MPI_Abort(MPI_COMM_WORLD, 76) - process 48 HDF5-DIAG: Error detected in HDF5 (1.10.5) MPI-process 49: #000: H5D.c line 145 in H5Dcreate2(): unable to create dataset major: Dataset minor: Unable to initialize object #001: H5Dint.c line 329 in H5D__create_named(): unable to create and link to dataset major: Dataset minor: Unable to initialize object #002: H5L.c line 1557 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1798 in H5L__create_real(): can't insert link major: Links minor: Unable to insert object #004: H5Gtraverse.c line 851 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 627 in H5G__traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1604 in H5L__link_cb(): unable to create object major: Links minor: Unable to initialize object #007: H5Oint.c line 2453 in H5O_obj_create(): unable to open object major: Object header minor: Can't open object #008: H5Doh.c line 300 in H5O__dset_create(): unable to create dataset major: Dataset minor: Unable to initialize object #009: H5Dint.c line 1274 in H5D__create(): unable to construct layout information major: Dataset minor: Unable to initialize object #010: H5Dchunk.c line 872 in H5D__chunk_construct(): unable to set chunk sizes major: Dataset minor: Bad value #011: H5Dchunk.c line 831 in H5D__chunk_set_sizes(): chunk size must be < 4GB major: Dataset minor: Unable to initialize object [49]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [49]PETSC ERROR: Error in external library [49]PETSC ERROR: Error in HDF5 call H5Dcreate2() Status -1 [49]PETSC ERROR: See https://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. [49]PETSC ERROR: Petsc Release Version 3.12.0, Sep, 29, 2019 [49]PETSC ERROR: ./ex10 on a named apsxrmd-0001 by sajid Fri Oct 11 15:23:48 2019 [49]PETSC ERROR: Configure options --prefix=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/petsc-3.12.0-dhpnwwpsdks6asnb4wjywjyms24dlmhl --with-ssl=0 --download-c2html=0 --download-sowing=0 --download-hwloc=0 CFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gcc" FFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gfortran" CXXFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/g++" --with-cc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicc --with-cxx=/blues/gpfs/home/software/spack-0.10.1/opt/spack/lHDF5-DIAG: Error detected in HDF5 (1.10.5) MPI-process 50: #000: H5D.c line 145 in H5Dcreate2(): unable to create dataset major: Dataset minor: Unable to initialize object #001: H5Dint.c line 329 in H5D__create_named(): unable to create and link to dataset major: Dataset minor: Unable to initialize object #002: H5L.c line 1557 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1798 in H5L__create_real(): can't insert link major: Links minor: Unable to insert object #004: H5Gtraverse.c line 851 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 627 in H5G__traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1604 in H5L__link_cb(): unable to create object major: Links minor: Unable to initialize object #007: H5Oint.c line 2453 in H5O_obj_create(): unable to open object major: Object header minor: Can't open object #008: H5Doh.c line 300 in H5O__dset_create(): unable to create dataset major: Dataset minor: Unable to initialize object #009: H5Dint.c line 1274 in H5D__create(): unable to construct layout information major: Dataset minor: Unable to initialize object #010: H5Dchunk.c line 872 in H5D__chunk_construct(): unable to set chunk sizes major: Dataset minor: Bad value #011: H5Dchunk.c line 831 in H5D__chunk_set_sizes(): chunk size must be < 4GB major: Dataset minor: Unable to initialize object [50]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [50]PETSC ERROR: Error in external library [50]PETSC ERROR: Error in HDF5 call H5Dcreate2() Status -1 [50]PETSC ERROR: See https://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. [50]PETSC ERROR: Petsc Release Version 3.12.0, Sep, 29, 2019 [50]PETSC ERROR: ./ex10 on a named apsxrmd-0001 by sajid Fri Oct 11 15:23:48 2019 [50]PETSC ERROR: Configure options --prefix=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/petsc-3.12.0-dhpnwwpsdks6asnb4wjywjyms24dlmhl --with-ssl=0 --download-c2html=0 --download-sowing=0 --download-hwloc=0 CFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gcc" FFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gfortran" CXXFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/g++" --with-cc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicc --with-cxx=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicpc --with-fc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiifort --FC_LINKER_FLAGS=-lintlc --with-precision=double --with-scalar-type=complex --with-shared-libraries=1 --with-debugging=0 --with-64-bit-indices=1 COPTFLAGS= FOPTFLAGS= CXXOPTFLAGS= --with-blaslapack-lib="/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_intel_lp64.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_sequential.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_core.so /lib64/libpthread.so /lib64/libm.so /lib64/libdl.so" --with-avx-512-kernels --with-memalign=64 --with-x=0 --with-clanguage=C --with-scalapack=0 --with-metis=1 --with-metis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/metis-5.1.0-2uxjs6gihdopyqjjyapxloxmopt3fyuf --with-hdf5=1 --with-hdf5-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/hdf5-1.10.5-4l2oqer7h7evmjcweba5iym767fnvn4g --with-hypre=0 --with-parmetis=1 --with-parmetis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/parmetis-4.0.3-ilq6ip5ckg7shv5pbbqpnqoihqag4x4e --with-mumps=0 --with-trilinos=0 --with-fftw=1 --with-fftw-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/fftw-3.3.8-rfi7e56hwc7gcek5w5er3evkb7cefks2 --with-superlu_dist=0 --with-suitesparse=0 --with-zlib-include=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/include --with-zlib-lib="-L/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/lib -lz" --with-zlib=1 [51]PETSC ERROR: #1 VecView_MPI_HDF5() line 814 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [51]PETSC ERROR: #2 VecView_MPI() line 951 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [51]PETSC ERROR: #3 VecView() line 574 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/interface/vector.c [51]PETSC ERROR: #4 main() line 47 in ex10.c [51]PETSC ERROR: PETSc Option Table entries: [51]PETSC ERROR: -log_view [51]PETSC ERROR: -m 268435456 [51]PETSC ERROR: ----------------End of Error Message -------send entire error message to petsc-maint@mcs.anl.gov---------- application called MPI_Abort(MPI_COMM_WORLD, 76) - process 51 HDF5-DIAG: Error detected in HDF5 (1.10.5) MPI-process 52: #000: H5D.c line 145 in H5Dcreate2(): unable to create dataset major: Dataset minor: Unable to initialize object #001: H5Dint.c line 329 in H5D__create_named(): unable to create and link to dataset major: Dataset minor: Unable to initialize object #002: H5L.c line 1557 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1798 in H5L__create_real(): can't insert link major: Links minor: Unable to insert object #004: H5Gtraverse.c line 851 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 627 in H5G__traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1604 in H5L__link_cb(): unable to create object major: Links minor: Unable to initialize object #007: H5Oint.c line 2453 in H5O_obj_create(): unable to open object major: Object header minor: Can't open object #008: H5Doh.c line 300 in H5O__dset_create(): unable to create dataset major: Dataset minor: Unable to initialize object #009: H5Dint.c line 1274 in H5D__create(): unable to construct layout information major: Dataset minor: Unable to initialize object #010: H5Dchunk.c line 872 in H5D__chunk_construct(): unable to set chunk sizes major: Dataset minor: Bad value #011: H5Dchunk.c line 831 in H5D__chunk_set_sizes(): chunk size must be < 4GB major: Dataset minor: Unable to initialize object [52]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [52]PETSC ERROR: Error in external library [52]PETSC ERROR: Error in HDF5 call H5Dcreate2() Status -1 [52]PETSC ERROR: See https://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. [52]PETSC ERROR: Petsc Release Version 3.12.0, Sep, 29, 2019 [52]PETSC ERROR: ./ex10 on a named apsxrmd-0001 by sajid Fri Oct 11 15:23:48 2019 [52]PETSC ERROR: Configure options --prefix=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/petsc-3.12.0-dhpnwwpsdks6asnb4wjywjyms24dlmhl --with-ssl=0 --download-c2html=0 --download-sowing=0 --download-hwloc=0 CFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gcc" FFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gfortran" CXXFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/g++" --with-cc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicc --with-cxx=/blues/gpfs/home/software/spack-0.10.1/opt/spack/lHDF5-DIAG: Error detected in HDF5 (1.10.5) MPI-process 53: #000: H5D.c line 145 in H5Dcreate2(): unable to create dataset major: Dataset minor: Unable to initialize object #001: H5Dint.c line 329 in H5D__create_named(): unable to create and link to dataset major: Dataset minor: Unable to initialize object #002: H5L.c line 1557 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1798 in H5L__create_real(): can't insert link major: Links minor: Unable to insert object #004: H5Gtraverse.c line 851 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 627 in H5G__traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1604 in H5L__link_cb(): unable to create object major: Links minor: Unable to initialize object #007: H5Oint.c line 2453 in H5O_obj_create(): unable to open object major: Object header minor: Can't open object #008: H5Doh.c line 300 in H5O__dset_create(): unable to create dataset major: Dataset minor: Unable to initialize object #009: H5Dint.c line 1274 in H5D__create(): unable to construct layout information major: Dataset minor: Unable to initialize object #010: H5Dchunk.c line 872 in H5D__chunk_construct(): unable to set chunk sizes major: Dataset minor: Bad value #011: H5Dchunk.c line 831 in H5D__chunk_set_sizes(): chunk size must be < 4GB major: Dataset minor: Unable to initialize object [53]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [53]PETSC ERROR: Error in external library [53]PETSC ERROR: Error in HDF5 call H5Dcreate2() Status -1 [53]PETSC ERROR: See https://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. [53]PETSC ERROR: Petsc Release Version 3.12.0, Sep, 29, 2019 [53]PETSC ERROR: ./ex10 on a named apsxrmd-0001 by sajid Fri Oct 11 15:23:48 2019 [53]PETSC ERROR: Configure options --prefix=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/petsc-3.12.0-dhpnwwpsdks6asnb4wjywjyms24dlmhl --with-ssl=0 --download-c2html=0 --download-sowing=0 --download-hwloc=0 CFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gcc" FFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gfortran" CXXFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/g++" --with-cc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicc --with-cxx=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicpc --with-fc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiifort --FC_LINKER_FLAGS=-lintlc --with-precision=double --with-scalar-type=complex --with-shared-libraries=1 --with-debugging=0 --with-64-bit-indices=1 COPTFLAGS= FOPTFLAGS= CXXOPTFLAGS= --with-blaslapack-lib="/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_intel_lp64.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_sequential.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_core.so /lib64/libpthread.so /lib64/libm.so /lib64/libdl.so" --with-avx-512-kernels --with-memalign=64 --with-x=0 --with-clanguage=C --with-scalapack=0 --with-metis=1 --with-metis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/metis-5.1.0-2uxjs6gihdopyqjjyapxloxmopt3fyuf --with-hdf5=1 --with-hdf5-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/hdf5-1.10.5-4l2oqer7h7evmjcweba5iym767fnvn4g --with-hypre=0 --with-parmetis=1 --with-parmetis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/parmetis-4.0.3-ilq6ip5ckg7shv5pbbqpnqoihqag4x4e --with-mumps=0 --with-trilinos=0 --with-fftw=1 --with-fftw-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/fftw-3.3.8-rfi7e56hwc7gcek5w5er3evkb7cefks2 --with-superlu_dist=0 --with-suitesparse=0 --with-zlib-include=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/include --with-zlib-lib="-L/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/lib -lz" --with-zlib=1 [54]PETSC ERROR: #1 VecView_MPI_HDF5() line 814 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [54]PETSC ERROR: #2 VecView_MPI() line 951 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [54]PETSC ERROR: #3 VecView() line 574 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/interface/vector.c [54]PETSC ERROR: #4 main() line 47 in ex10.c [54]PETSC ERROR: PETSc Option Table entries: [54]PETSC ERROR: -log_view [54]PETSC ERROR: -m 268435456 [54]PETSC ERROR: ----------------End of Error Message -------send entire error message to petsc-maint@mcs.anl.gov---------- application called MPI_Abort(MPI_COMM_WORLD, 76) - process 54 HDF5-DIAG: Error detected in HDF5 (1.10.5) MPI-process 55: #000: H5D.c line 145 in H5Dcreate2(): unable to create dataset major: Dataset minor: Unable to initialize object #001: H5Dint.c line 329 in H5D__create_named(): unable to create and link to dataset major: Dataset minor: Unable to initialize object #002: H5L.c line 1557 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1798 in H5L__create_real(): can't insert link major: Links minor: Unable to insert object #004: H5Gtraverse.c line 851 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 627 in H5G__traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1604 in H5L__link_cb(): unable to create object major: Links minor: Unable to initialize object #007: H5Oint.c line 2453 in H5O_obj_create(): unable to open object major: Object header minor: Can't open object #008: H5Doh.c line 300 in H5O__dset_create(): unable to create dataset major: Dataset minor: Unable to initialize object #009: H5Dint.c line 1274 in H5D__create(): unable to construct layout information major: Dataset minor: Unable to initialize object #010: H5Dchunk.c line 872 in H5D__chunk_construct(): unable to set chunk sizes major: Dataset minor: Bad value #011: H5Dchunk.c line 831 in H5D__chunk_set_sizes(): chunk size must be < 4GB major: Dataset minor: Unable to initialize object [55]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [55]PETSC ERROR: Error in external library [55]PETSC ERROR: Error in HDF5 call H5Dcreate2() Status -1 [55]PETSC ERROR: See https://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. [55]PETSC ERROR: Petsc Release Version 3.12.0, Sep, 29, 2019 [55]PETSC ERROR: ./ex10 on a named apsxrmd-0001 by sajid Fri Oct 11 15:23:48 2019 [55]PETSC ERROR: Configure options --prefix=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/petsc-3.12.0-dhpnwwpsdks6asnb4wjywjyms24dlmhl --with-ssl=0 --download-c2html=0 --download-sowing=0 --download-hwloc=0 CFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gcc" FFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gfortran" CXXFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/g++" --with-cc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicc --with-cxx=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicpc --with-fc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiifort --FC_LINKER_FLAGS=-lintlc --with-precision=double --with-scalar-type=complex --with-shared-libraries=1 --with-debugging=0 --with-64-bit-indices=1 COPTFLAGS= FOPTFLAGS= CXXOPTFLAGS= --with-blaslapack-lib="/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_intel_lp64.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_sequential.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_core.so /lib64/libpthread.so /lib64/libm.so /lib64/libdl.so" --with-avx-512-kernels --with-memalign=64 --with-x=0 --with-clanguage=C --with-scalapack=0 --with-metis=1 --with-metis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/metis-5.1.0-2uxjs6gihdopyqjjyapxloxmopt3fyuf --with-hdf5=1 --with-hdf5-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/hdf5-1.10.5-4l2oqer7h7evmjcweba5iym767fnvn4g --with-hypre=0 --with-parmetis=1 --with-parmetis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/parmetis-4.0.3-ilq6ip5ckg7shv5pbbqpnqoihqag4x4e --with-mumps=0 --with-trilinos=0 --with-fftw=1 --with-fftw-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/fftw-3.3.8-rfi7e56hwc7gcek5w5er3evkb7cefks2 --with-superlu_dist=0 --with-suitesparse=0 --with-zlib-include=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/include --with-zlib-lib="-L/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/lib -lz" --with-zlib=1 [56]PETSC ERROR: #1 VecView_MPI_HDF5() line 814 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [56]PETSC ERROR: #2 VecView_MPI() line 951 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [56]PETSC ERROR: #3 VecView() line 574 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/interface/vector.c [56]PETSC ERROR: #4 main() line 47 in ex10.c [56]PETSC ERROR: PETSc Option Table entries: [56]PETSC ERROR: -log_view [56]PETSC ERROR: -m 268435456 [56]PETSC ERROR: ----------------End of Error Message -------send entire error message to petsc-maint@mcs.anl.gov---------- application called MPI_Abort(MPI_COMM_WORLD, 76) - process 56 inux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicpc --with-fc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiifort --FC_LINKER_FLAGS=-lintlc --with-precision=double --with-scalar-type=complex --with-shared-libraries=1 --with-debugging=0 --with-64-bit-indices=1 COPTFLAGS= FOPTFLAGS= CXXOPTFLAGS= --with-blaslapack-lib="/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_intel_lp64.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_sequential.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_core.so /lib64/libpthread.so /lib64/libm.so /lib64/libdl.so" --with-avx-512-kernels --with-memalign=64 --with-x=0 --with-clanguage=C --with-scalapack=0 --with-metis=1 --with-metis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/metis-5.1.0-2uxjs6gihdopyqjjyapxloxmopt3fyuf --with-hdf5=1 --with-hdf5-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/hdf5-1.10.5-4l2oqer7h7evmjcweba5iym767fnvn4g --with-hypre=0 --with-parmetis=1 --with-parmetis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/parmetis-4.0.3-ilq6ip5ckg7shv5pbbqpnqoihqag4x4e --with-mumps=0 --with-trilinos=0 --with-fftw=1 --with-fftw-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/fftw-3.3.8-rfi7e56hwc7gcek5w5er3evkb7cefks2 --with-superlu_dist=0 --with-suitesparse=0 --with-zlib-include=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/include --with-zlib-lib="-L/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/lib -lz" --with-zlib=1 [57]PETSC ERROR: #1 VecView_MPI_HDF5() line 814 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [57]PETSC ERROR: #2 VecView_MPI() line 951 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [57]PETSC ERROR: #3 VecView() line 574 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/interface/vector.c [57]PETSC ERROR: #4 main() line 47 in ex10.c [57]PETSC ERROR: PETSc Option Table entries: [57]PETSC ERROR: -log_view [57]PETSC ERROR: -m 268435456 [57]PETSC ERROR: ----------------End of Error Message -------send entire error message to petsc-maint@mcs.anl.gov---------- application called MPI_Abort(MPI_COMM_WORLD, 76) - process 57 inux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicpc --with-fc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiifort --FC_LINKER_FLAGS=-lintlc --with-precision=double --with-scalar-type=complex --with-shared-libraries=1 --with-debugging=0 --with-64-bit-indices=1 COPTFLAGS= FOPTFLAGS= CXXOPTFLAGS= --with-blaslapack-lib="/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_intel_lp64.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_sequential.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_core.so /lib64/libpthread.so /lib64/libm.so /lib64/libdl.so" --with-avx-512-kernels --with-memalign=64 --with-x=0 --with-clanguage=C --with-scalapack=0 --with-metis=1 --with-metis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/metis-5.1.0-2uxjs6gihdopyqjjyapxloxmopt3fyuf --with-hdf5=1 --with-hdf5-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/hdf5-1.10.5-4l2oqer7h7evmjcweba5iym767fnvn4g --with-hypre=0 --with-parmetis=1 --with-parmetis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/parmetis-4.0.3-ilq6ip5ckg7shv5pbbqpnqoihqag4x4e --with-mumps=0 --with-trilinos=0 --with-fftw=1 --with-fftw-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/fftw-3.3.8-rfi7e56hwc7gcek5w5er3evkb7cefks2 --with-superlu_dist=0 --with-suitesparse=0 --with-zlib-include=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/include --with-zlib-lib="-L/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/lib -lz" --with-zlib=1 [58]PETSC ERROR: #1 VecView_MPI_HDF5() line 814 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [58]PETSC ERROR: #2 VecView_MPI() line 951 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [58]PETSC ERROR: #3 VecView() line 574 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/interface/vector.c [58]PETSC ERROR: #4 main() line 47 in ex10.c [58]PETSC ERROR: PETSc Option Table entries: [58]PETSC ERROR: -log_view [58]PETSC ERROR: -m 268435456 [58]PETSC ERROR: ----------------End of Error Message -------send entire error message to petsc-maint@mcs.anl.gov---------- application called MPI_Abort(MPI_COMM_WORLD, 76) - process 58 HDF5-DIAG: Error detected in HDF5 (1.10.5) MPI-process 59: #000: H5D.c line 145 in H5Dcreate2(): unable to create dataset major: Dataset minor: Unable to initialize object #001: H5Dint.c line 329 in H5D__create_named(): unable to create and link to dataset major: Dataset minor: Unable to initialize object #002: H5L.c line 1557 in H5L_link_object(): unable to create new link to object major: Links minor: Unable to initialize object #003: H5L.c line 1798 in H5L__create_real(): can't insert link major: Links minor: Unable to insert object #004: H5Gtraverse.c line 851 in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found #005: H5Gtraverse.c line 627 in H5G__traverse_real(): traversal operator failed major: Symbol table minor: Callback failed #006: H5L.c line 1604 in H5L__link_cb(): unable to create object major: Links minor: Unable to initialize object #007: H5Oint.c line 2453 in H5O_obj_create(): unable to open object major: Object header minor: Can't open object #008: H5Doh.c line 300 in H5O__dset_create(): unable to create dataset major: Dataset minor: Unable to initialize object #009: H5Dint.c line 1274 in H5D__create(): unable to construct layout information major: Dataset minor: Unable to initialize object #010: H5Dchunk.c line 872 in H5D__chunk_construct(): unable to set chunk sizes major: Dataset minor: Bad value #011: H5Dchunk.c line 831 in H5D__chunk_set_sizes(): chunk size must be < 4GB major: Dataset minor: Unable to initialize object [59]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [59]PETSC ERROR: Error in external library [59]PETSC ERROR: Error in HDF5 call H5Dcreate2() Status -1 [59]PETSC ERROR: See https://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. [59]PETSC ERROR: Petsc Release Version 3.12.0, Sep, 29, 2019 [59]PETSC ERROR: ./ex10 on a named apsxrmd-0001 by sajid Fri Oct 11 15:23:48 2019 [59]PETSC ERROR: Configure options --prefix=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/petsc-3.12.0-dhpnwwpsdks6asnb4wjywjyms24dlmhl --with-ssl=0 --download-c2html=0 --download-sowing=0 --download-hwloc=0 CFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gcc" FFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/gfortran" CXXFLAGS="-O3 -xMIC-AVX512 -gcc-name=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-7.3.0-xyzezhjmbiebkjfoakso464rhfshlkyq/bin/g++" --with-cc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicc --with-cxx=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicpc --with-fc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiifort --FC_LINKER_FLAGS=-lintlc --with-precision=double --with-scalar-type=complex --with-shared-libraries=1 --with-debugging=0 --with-64-bit-indices=1 COPTFLAGS= FOPTFLAGS= CXXOPTFLAGS= --with-blaslapack-lib="/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_intel_lp64.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_sequential.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_core.so /lib64/libpthread.so /lib64/libm.so /lib64/libdl.so" --with-avx-512-kernels --with-memalign=64 --with-x=0 --with-clanguage=C --with-scalapack=0 --with-metis=1 --with-metis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/metis-5.1.0-2uxjs6gihdopyqjjyapxloxmopt3fyuf --with-hdf5=1 --with-hdf5-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/hdf5-1.10.5-4l2oqer7h7evmjcweba5iym767fnvn4g --with-hypre=0 --with-parmetis=1 --with-parmetis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/parmetis-4.0.3-ilq6ip5ckg7shv5pbbqpnqoihqag4x4e --with-mumps=0 --with-trilinos=0 --with-fftw=1 --with-fftw-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/fftw-3.3.8-rfi7e56hwc7gcek5w5er3evkb7cefks2 --with-superlu_dist=0 --with-suitesparse=0 --with-zlib-include=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/include --with-zlib-lib="-L/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/lib -lz" --with-zlib=1 [60]PETSC ERROR: #1 VecView_MPI_HDF5() line 814 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [60]PETSC ERROR: #2 VecView_MPI() line 951 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [60]PETSC ERROR: #3 VecView() line 574 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/interface/vector.c [60]PETSC ERROR: #4 main() line 47 in ex10.c [60]PETSC ERROR: PETSc Option Table entries: [60]PETSC ERROR: -log_view [60]PETSC ERROR: -m 268435456 [60]PETSC ERROR: ----------------End of Error Message -------send entire error message to petsc-maint@mcs.anl.gov---------- application called MPI_Abort(MPI_COMM_WORLD, 76) - process 60 inux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicpc --with-fc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiifort --FC_LINKER_FLAGS=-lintlc --with-precision=double --with-scalar-type=complex --with-shared-libraries=1 --with-debugging=0 --with-64-bit-indices=1 COPTFLAGS= FOPTFLAGS= CXXOPTFLAGS= --with-blaslapack-lib="/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_intel_lp64.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_sequential.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_core.so /lib64/libpthread.so /lib64/libm.so /lib64/libdl.so" --with-avx-512-kernels --with-memalign=64 --with-x=0 --with-clanguage=C --with-scalapack=0 --with-metis=1 --with-metis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/metis-5.1.0-2uxjs6gihdopyqjjyapxloxmopt3fyuf --with-hdf5=1 --with-hdf5-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/hdf5-1.10.5-4l2oqer7h7evmjcweba5iym767fnvn4g --with-hypre=0 --with-parmetis=1 --with-parmetis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/parmetis-4.0.3-ilq6ip5ckg7shv5pbbqpnqoihqag4x4e --with-mumps=0 --with-trilinos=0 --with-fftw=1 --with-fftw-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/fftw-3.3.8-rfi7e56hwc7gcek5w5er3evkb7cefks2 --with-superlu_dist=0 --with-suitesparse=0 --with-zlib-include=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/include --with-zlib-lib="-L/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/lib -lz" --with-zlib=1 [61]PETSC ERROR: #1 VecView_MPI_HDF5() line 814 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [61]PETSC ERROR: #2 VecView_MPI() line 951 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [61]PETSC ERROR: #3 VecView() line 574 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/interface/vector.c [61]PETSC ERROR: #4 main() line 47 in ex10.c [61]PETSC ERROR: PETSc Option Table entries: [61]PETSC ERROR: -log_view [61]PETSC ERROR: -m 268435456 [61]PETSC ERROR: ----------------End of Error Message -------send entire error message to petsc-maint@mcs.anl.gov---------- application called MPI_Abort(MPI_COMM_WORLD, 76) - process 61 inux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicpc --with-fc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiifort --FC_LINKER_FLAGS=-lintlc --with-precision=double --with-scalar-type=complex --with-shared-libraries=1 --with-debugging=0 --with-64-bit-indices=1 COPTFLAGS= FOPTFLAGS= CXXOPTFLAGS= --with-blaslapack-lib="/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_intel_lp64.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_sequential.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_core.so /lib64/libpthread.so /lib64/libm.so /lib64/libdl.so" --with-avx-512-kernels --with-memalign=64 --with-x=0 --with-clanguage=C --with-scalapack=0 --with-metis=1 --with-metis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/metis-5.1.0-2uxjs6gihdopyqjjyapxloxmopt3fyuf --with-hdf5=1 --with-hdf5-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/hdf5-1.10.5-4l2oqer7h7evmjcweba5iym767fnvn4g --with-hypre=0 --with-parmetis=1 --with-parmetis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/parmetis-4.0.3-ilq6ip5ckg7shv5pbbqpnqoihqag4x4e --with-mumps=0 --with-trilinos=0 --with-fftw=1 --with-fftw-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/fftw-3.3.8-rfi7e56hwc7gcek5w5er3evkb7cefks2 --with-superlu_dist=0 --with-suitesparse=0 --with-zlib-include=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/include --with-zlib-lib="-L/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/lib -lz" --with-zlib=1 [62]PETSC ERROR: #1 VecView_MPI_HDF5() line 814 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [62]PETSC ERROR: #2 VecView_MPI() line 951 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [62]PETSC ERROR: #3 VecView() line 574 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/interface/vector.c [62]PETSC ERROR: #4 main() line 47 in ex10.c [62]PETSC ERROR: PETSc Option Table entries: [62]PETSC ERROR: -log_view [62]PETSC ERROR: -m 268435456 [62]PETSC ERROR: ----------------End of Error Message -------send entire error message to petsc-maint@mcs.anl.gov---------- application called MPI_Abort(MPI_COMM_WORLD, 76) - process 62 inux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicpc --with-fc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiifort --FC_LINKER_FLAGS=-lintlc --with-precision=double --with-scalar-type=complex --with-shared-libraries=1 --with-debugging=0 --with-64-bit-indices=1 COPTFLAGS= FOPTFLAGS= CXXOPTFLAGS= --with-blaslapack-lib="/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_intel_lp64.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_sequential.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_core.so /lib64/libpthread.so /lib64/libm.so /lib64/libdl.so" --with-avx-512-kernels --with-memalign=64 --with-x=0 --with-clanguage=C --with-scalapack=0 --with-metis=1 --with-metis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/metis-5.1.0-2uxjs6gihdopyqjjyapxloxmopt3fyuf --with-hdf5=1 --with-hdf5-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/hdf5-1.10.5-4l2oqer7h7evmjcweba5iym767fnvn4g --with-hypre=0 --with-parmetis=1 --with-parmetis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/parmetis-4.0.3-ilq6ip5ckg7shv5pbbqpnqoihqag4x4e --with-mumps=0 --with-trilinos=0 --with-fftw=1 --with-fftw-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/fftw-3.3.8-rfi7e56hwc7gcek5w5er3evkb7cefks2 --with-superlu_dist=0 --with-suitesparse=0 --with-zlib-include=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/include --with-zlib-lib="-L/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/lib -lz" --with-zlib=1 [63]PETSC ERROR: #1 VecView_MPI_HDF5() line 814 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [63]PETSC ERROR: #2 VecView_MPI() line 951 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [63]PETSC ERROR: #3 VecView() line 574 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/interface/vector.c [63]PETSC ERROR: #4 main() line 47 in ex10.c [63]PETSC ERROR: PETSc Option Table entries: [63]PETSC ERROR: -log_view [63]PETSC ERROR: -m 268435456 [63]PETSC ERROR: ----------------End of Error Message -------send entire error message to petsc-maint@mcs.anl.gov---------- application called MPI_Abort(MPI_COMM_WORLD, 76) - process 63 application called MPI_Abort(MPI_COMM_WORLD, 76) - process 1 application called MPI_Abort(MPI_COMM_WORLD, 76) - process 2 application called MPI_Abort(MPI_COMM_WORLD, 76) - process 3 application called MPI_Abort(MPI_COMM_WORLD, 76) - process 4 application called MPI_Abort(MPI_COMM_WORLD, 76) - process 5 application called MPI_Abort(MPI_COMM_WORLD, 76) - process 6 application called MPI_Abort(MPI_COMM_WORLD, 76) - process 7 application called MPI_Abort(MPI_COMM_WORLD, 76) - process 16 application called MPI_Abort(MPI_COMM_WORLD, 76) - process 17 application called MPI_Abort(MPI_COMM_WORLD, 76) - process 18 application called MPI_Abort(MPI_COMM_WORLD, 76) - process 19 inux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicpc --with-fc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiifort --FC_LINKER_FLAGS=-lintlc --with-precision=double --with-scalar-type=complex --with-shared-libraries=1 --with-debugging=0 --with-64-bit-indices=1 COPTFLAGS= FOPTFLAGS= CXXOPTFLAGS= --with-blaslapack-lib="/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_intel_lp64.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_sequential.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_core.so /lib64/libpthread.so /lib64/libm.so /lib64/libdl.so" --with-avx-512-kernels --with-memalign=64 --with-x=0 --with-clanguage=C --with-scalapack=0 --with-metis=1 --with-metis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/metis-5.1.0-2uxjs6gihdopyqjjyapxloxmopt3fyuf --with-hdf5=1 --with-hdf5-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/hdf5-1.10.5-4l2oqer7h7evmjcweba5iym767fnvn4g --with-hypre=0 --with-parmetis=1 --with-parmetis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/parmetis-4.0.3-ilq6ip5ckg7shv5pbbqpnqoihqag4x4e --with-mumps=0 --with-trilinos=0 --with-fftw=1 --with-fftw-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/fftw-3.3.8-rfi7e56hwc7gcek5w5er3evkb7cefks2 --with-superlu_dist=0 --with-suitesparse=0 --with-zlib-include=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/include --with-zlib-lib="-L/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/lib -lz" --with-zlib=1 [25]PETSC ERROR: #1 VecView_MPI_HDF5() line 814 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [25]PETSC ERROR: #2 VecView_MPI() line 951 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [25]PETSC ERROR: #3 VecView() line 574 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/interface/vector.c [25]PETSC ERROR: #4 main() line 47 in ex10.c [25]PETSC ERROR: PETSc Option Table entries: [25]PETSC ERROR: -log_view [25]PETSC ERROR: -m 268435456 [25]PETSC ERROR: ----------------End of Error Message -------send entire error message to petsc-maint@mcs.anl.gov---------- application called MPI_Abort(MPI_COMM_WORLD, 76) - process 25 inux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicpc --with-fc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiifort --FC_LINKER_FLAGS=-lintlc --with-precision=double --with-scalar-type=complex --with-shared-libraries=1 --with-debugging=0 --with-64-bit-indices=1 COPTFLAGS= FOPTFLAGS= CXXOPTFLAGS= --with-blaslapack-lib="/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_intel_lp64.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_sequential.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_core.so /lib64/libpthread.so /lib64/libm.so /lib64/libdl.so" --with-avx-512-kernels --with-memalign=64 --with-x=0 --with-clanguage=C --with-scalapack=0 --with-metis=1 --with-metis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/metis-5.1.0-2uxjs6gihdopyqjjyapxloxmopt3fyuf --with-hdf5=1 --with-hdf5-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/hdf5-1.10.5-4l2oqer7h7evmjcweba5iym767fnvn4g --with-hypre=0 --with-parmetis=1 --with-parmetis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/parmetis-4.0.3-ilq6ip5ckg7shv5pbbqpnqoihqag4x4e --with-mumps=0 --with-trilinos=0 --with-fftw=1 --with-fftw-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/fftw-3.3.8-rfi7e56hwc7gcek5w5er3evkb7cefks2 --with-superlu_dist=0 --with-suitesparse=0 --with-zlib-include=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/include --with-zlib-lib="-L/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/lib -lz" --with-zlib=1 [26]PETSC ERROR: #1 VecView_MPI_HDF5() line 814 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [26]PETSC ERROR: #2 VecView_MPI() line 951 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [26]PETSC ERROR: #3 VecView() line 574 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/interface/vector.c [26]PETSC ERROR: #4 main() line 47 in ex10.c [26]PETSC ERROR: PETSc Option Table entries: [26]PETSC ERROR: -log_view [26]PETSC ERROR: -m 268435456 [26]PETSC ERROR: ----------------End of Error Message -------send entire error message to petsc-maint@mcs.anl.gov---------- application called MPI_Abort(MPI_COMM_WORLD, 76) - process 26 inux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicpc --with-fc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiifort --FC_LINKER_FLAGS=-lintlc --with-precision=double --with-scalar-type=complex --with-shared-libraries=1 --with-debugging=0 --with-64-bit-indices=1 COPTFLAGS= FOPTFLAGS= CXXOPTFLAGS= --with-blaslapack-lib="/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_intel_lp64.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_sequential.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_core.so /lib64/libpthread.so /lib64/libm.so /lib64/libdl.so" --with-avx-512-kernels --with-memalign=64 --with-x=0 --with-clanguage=C --with-scalapack=0 --with-metis=1 --with-metis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/metis-5.1.0-2uxjs6gihdopyqjjyapxloxmopt3fyuf --with-hdf5=1 --with-hdf5-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/hdf5-1.10.5-4l2oqer7h7evmjcweba5iym767fnvn4g --with-hypre=0 --with-parmetis=1 --with-parmetis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/parmetis-4.0.3-ilq6ip5ckg7shv5pbbqpnqoihqag4x4e --with-mumps=0 --with-trilinos=0 --with-fftw=1 --with-fftw-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/fftw-3.3.8-rfi7e56hwc7gcek5w5er3evkb7cefks2 --with-superlu_dist=0 --with-suitesparse=0 --with-zlib-include=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/include --with-zlib-lib="-L/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/lib -lz" --with-zlib=1 [27]PETSC ERROR: #1 VecView_MPI_HDF5() line 814 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [27]PETSC ERROR: #2 VecView_MPI() line 951 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [27]PETSC ERROR: #3 VecView() line 574 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/interface/vector.c [27]PETSC ERROR: #4 main() line 47 in ex10.c [27]PETSC ERROR: PETSc Option Table entries: [27]PETSC ERROR: -log_view [27]PETSC ERROR: -m 268435456 [27]PETSC ERROR: ----------------End of Error Message -------send entire error message to petsc-maint@mcs.anl.gov---------- application called MPI_Abort(MPI_COMM_WORLD, 76) - process 27 application called MPI_Abort(MPI_COMM_WORLD, 76) - process 28 inux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicpc --with-fc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiifort --FC_LINKER_FLAGS=-lintlc --with-precision=double --with-scalar-type=complex --with-shared-libraries=1 --with-debugging=0 --with-64-bit-indices=1 COPTFLAGS= FOPTFLAGS= CXXOPTFLAGS= --with-blaslapack-lib="/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_intel_lp64.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_sequential.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_core.so /lib64/libpthread.so /lib64/libm.so /lib64/libdl.so" --with-avx-512-kernels --with-memalign=64 --with-x=0 --with-clanguage=C --with-scalapack=0 --with-metis=1 --with-metis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/metis-5.1.0-2uxjs6gihdopyqjjyapxloxmopt3fyuf --with-hdf5=1 --with-hdf5-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/hdf5-1.10.5-4l2oqer7h7evmjcweba5iym767fnvn4g --with-hypre=0 --with-parmetis=1 --with-parmetis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/parmetis-4.0.3-ilq6ip5ckg7shv5pbbqpnqoihqag4x4e --with-mumps=0 --with-trilinos=0 --with-fftw=1 --with-fftw-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/fftw-3.3.8-rfi7e56hwc7gcek5w5er3evkb7cefks2 --with-superlu_dist=0 --with-suitesparse=0 --with-zlib-include=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/include --with-zlib-lib="-L/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/lib -lz" --with-zlib=1 [29]PETSC ERROR: #1 VecView_MPI_HDF5() line 814 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [29]PETSC ERROR: #2 VecView_MPI() line 951 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [29]PETSC ERROR: #3 VecView() line 574 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/interface/vector.c [29]PETSC ERROR: #4 main() line 47 in ex10.c [29]PETSC ERROR: PETSc Option Table entries: [29]PETSC ERROR: -log_view [29]PETSC ERROR: -m 268435456 [29]PETSC ERROR: ----------------End of Error Message -------send entire error message to petsc-maint@mcs.anl.gov---------- application called MPI_Abort(MPI_COMM_WORLD, 76) - process 29 inux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicpc --with-fc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiifort --FC_LINKER_FLAGS=-lintlc --with-precision=double --with-scalar-type=complex --with-shared-libraries=1 --with-debugging=0 --with-64-bit-indices=1 COPTFLAGS= FOPTFLAGS= CXXOPTFLAGS= --with-blaslapack-lib="/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_intel_lp64.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_sequential.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_core.so /lib64/libpthread.so /lib64/libm.so /lib64/libdl.so" --with-avx-512-kernels --with-memalign=64 --with-x=0 --with-clanguage=C --with-scalapack=0 --with-metis=1 --with-metis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/metis-5.1.0-2uxjs6gihdopyqjjyapxloxmopt3fyuf --with-hdf5=1 --with-hdf5-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/hdf5-1.10.5-4l2oqer7h7evmjcweba5iym767fnvn4g --with-hypre=0 --with-parmetis=1 --with-parmetis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/parmetis-4.0.3-ilq6ip5ckg7shv5pbbqpnqoihqag4x4e --with-mumps=0 --with-trilinos=0 --with-fftw=1 --with-fftw-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/fftw-3.3.8-rfi7e56hwc7gcek5w5er3evkb7cefks2 --with-superlu_dist=0 --with-suitesparse=0 --with-zlib-include=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/include --with-zlib-lib="-L/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/lib -lz" --with-zlib=1 [30]PETSC ERROR: #1 VecView_MPI_HDF5() line 814 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [30]PETSC ERROR: #2 VecView_MPI() line 951 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [30]PETSC ERROR: #3 VecView() line 574 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/interface/vector.c [30]PETSC ERROR: #4 main() line 47 in ex10.c [30]PETSC ERROR: PETSc Option Table entries: [30]PETSC ERROR: -log_view [30]PETSC ERROR: -m 268435456 [30]PETSC ERROR: ----------------End of Error Message -------send entire error message to petsc-maint@mcs.anl.gov---------- application called MPI_Abort(MPI_COMM_WORLD, 76) - process 30 inux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicpc --with-fc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiifort --FC_LINKER_FLAGS=-lintlc --with-precision=double --with-scalar-type=complex --with-shared-libraries=1 --with-debugging=0 --with-64-bit-indices=1 COPTFLAGS= FOPTFLAGS= CXXOPTFLAGS= --with-blaslapack-lib="/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_intel_lp64.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_sequential.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_core.so /lib64/libpthread.so /lib64/libm.so /lib64/libdl.so" --with-avx-512-kernels --with-memalign=64 --with-x=0 --with-clanguage=C --with-scalapack=0 --with-metis=1 --with-metis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/metis-5.1.0-2uxjs6gihdopyqjjyapxloxmopt3fyuf --with-hdf5=1 --with-hdf5-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/hdf5-1.10.5-4l2oqer7h7evmjcweba5iym767fnvn4g --with-hypre=0 --with-parmetis=1 --with-parmetis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/parmetis-4.0.3-ilq6ip5ckg7shv5pbbqpnqoihqag4x4e --with-mumps=0 --with-trilinos=0 --with-fftw=1 --with-fftw-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/fftw-3.3.8-rfi7e56hwc7gcek5w5er3evkb7cefks2 --with-superlu_dist=0 --with-suitesparse=0 --with-zlib-include=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/include --with-zlib-lib="-L/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/lib -lz" --with-zlib=1 [31]PETSC ERROR: #1 VecView_MPI_HDF5() line 814 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [31]PETSC ERROR: #2 VecView_MPI() line 951 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [31]PETSC ERROR: #3 VecView() line 574 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/interface/vector.c [31]PETSC ERROR: #4 main() line 47 in ex10.c [31]PETSC ERROR: PETSc Option Table entries: [31]PETSC ERROR: -log_view [31]PETSC ERROR: -m 268435456 [31]PETSC ERROR: ----------------End of Error Message -------send entire error message to petsc-maint@mcs.anl.gov---------- application called MPI_Abort(MPI_COMM_WORLD, 76) - process 31 inux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicpc --with-fc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiifort --FC_LINKER_FLAGS=-lintlc --with-precision=double --with-scalar-type=complex --with-shared-libraries=1 --with-debugging=0 --with-64-bit-indices=1 COPTFLAGS= FOPTFLAGS= CXXOPTFLAGS= --with-blaslapack-lib="/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_intel_lp64.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_sequential.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_core.so /lib64/libpthread.so /lib64/libm.so /lib64/libdl.so" --with-avx-512-kernels --with-memalign=64 --with-x=0 --with-clanguage=C --with-scalapack=0 --with-metis=1 --with-metis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/metis-5.1.0-2uxjs6gihdopyqjjyapxloxmopt3fyuf --with-hdf5=1 --with-hdf5-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/hdf5-1.10.5-4l2oqer7h7evmjcweba5iym767fnvn4g --with-hypre=0 --with-parmetis=1 --with-parmetis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/parmetis-4.0.3-ilq6ip5ckg7shv5pbbqpnqoihqag4x4e --with-mumps=0 --with-trilinos=0 --with-fftw=1 --with-fftw-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/fftw-3.3.8-rfi7e56hwc7gcek5w5er3evkb7cefks2 --with-superlu_dist=0 --with-suitesparse=0 --with-zlib-include=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/include --with-zlib-lib="-L/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/lib -lz" --with-zlib=1 [35]PETSC ERROR: #1 VecView_MPI_HDF5() line 814 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [35]PETSC ERROR: #2 VecView_MPI() line 951 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [35]PETSC ERROR: #3 VecView() line 574 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/interface/vector.c [35]PETSC ERROR: #4 main() line 47 in ex10.c [35]PETSC ERROR: PETSc Option Table entries: [35]PETSC ERROR: -log_view [35]PETSC ERROR: -m 268435456 [35]PETSC ERROR: ----------------End of Error Message -------send entire error message to petsc-maint@mcs.anl.gov---------- application called MPI_Abort(MPI_COMM_WORLD, 76) - process 35 inux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicpc --with-fc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiifort --FC_LINKER_FLAGS=-lintlc --with-precision=double --with-scalar-type=complex --with-shared-libraries=1 --with-debugging=0 --with-64-bit-indices=1 COPTFLAGS= FOPTFLAGS= CXXOPTFLAGS= --with-blaslapack-lib="/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_intel_lp64.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_sequential.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_core.so /lib64/libpthread.so /lib64/libm.so /lib64/libdl.so" --with-avx-512-kernels --with-memalign=64 --with-x=0 --with-clanguage=C --with-scalapack=0 --with-metis=1 --with-metis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/metis-5.1.0-2uxjs6gihdopyqjjyapxloxmopt3fyuf --with-hdf5=1 --with-hdf5-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/hdf5-1.10.5-4l2oqer7h7evmjcweba5iym767fnvn4g --with-hypre=0 --with-parmetis=1 --with-parmetis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/parmetis-4.0.3-ilq6ip5ckg7shv5pbbqpnqoihqag4x4e --with-mumps=0 --with-trilinos=0 --with-fftw=1 --with-fftw-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/fftw-3.3.8-rfi7e56hwc7gcek5w5er3evkb7cefks2 --with-superlu_dist=0 --with-suitesparse=0 --with-zlib-include=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/include --with-zlib-lib="-L/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/lib -lz" --with-zlib=1 [36]PETSC ERROR: #1 VecView_MPI_HDF5() line 814 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [36]PETSC ERROR: #2 VecView_MPI() line 951 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [36]PETSC ERROR: #3 VecView() line 574 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/interface/vector.c [36]PETSC ERROR: #4 main() line 47 in ex10.c [36]PETSC ERROR: PETSc Option Table entries: [36]PETSC ERROR: -log_view [36]PETSC ERROR: -m 268435456 [36]PETSC ERROR: ----------------End of Error Message -------send entire error message to petsc-maint@mcs.anl.gov---------- application called MPI_Abort(MPI_COMM_WORLD, 76) - process 36 inux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicpc --with-fc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiifort --FC_LINKER_FLAGS=-lintlc --with-precision=double --with-scalar-type=complex --with-shared-libraries=1 --with-debugging=0 --with-64-bit-indices=1 COPTFLAGS= FOPTFLAGS= CXXOPTFLAGS= --with-blaslapack-lib="/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_intel_lp64.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_sequential.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_core.so /lib64/libpthread.so /lib64/libm.so /lib64/libdl.so" --with-avx-512-kernels --with-memalign=64 --with-x=0 --with-clanguage=C --with-scalapack=0 --with-metis=1 --with-metis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/metis-5.1.0-2uxjs6gihdopyqjjyapxloxmopt3fyuf --with-hdf5=1 --with-hdf5-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/hdf5-1.10.5-4l2oqer7h7evmjcweba5iym767fnvn4g --with-hypre=0 --with-parmetis=1 --with-parmetis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/parmetis-4.0.3-ilq6ip5ckg7shv5pbbqpnqoihqag4x4e --with-mumps=0 --with-trilinos=0 --with-fftw=1 --with-fftw-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/fftw-3.3.8-rfi7e56hwc7gcek5w5er3evkb7cefks2 --with-superlu_dist=0 --with-suitesparse=0 --with-zlib-include=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/include --with-zlib-lib="-L/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/lib -lz" --with-zlib=1 [37]PETSC ERROR: #1 VecView_MPI_HDF5() line 814 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [37]PETSC ERROR: #2 VecView_MPI() line 951 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [37]PETSC ERROR: #3 VecView() line 574 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/interface/vector.c [37]PETSC ERROR: #4 main() line 47 in ex10.c [37]PETSC ERROR: PETSc Option Table entries: [37]PETSC ERROR: -log_view [37]PETSC ERROR: -m 268435456 [37]PETSC ERROR: ----------------End of Error Message -------send entire error message to petsc-maint@mcs.anl.gov---------- application called MPI_Abort(MPI_COMM_WORLD, 76) - process 37 inux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicpc --with-fc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiifort --FC_LINKER_FLAGS=-lintlc --with-precision=double --with-scalar-type=complex --with-shared-libraries=1 --with-debugging=0 --with-64-bit-indices=1 COPTFLAGS= FOPTFLAGS= CXXOPTFLAGS= --with-blaslapack-lib="/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_intel_lp64.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_sequential.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_core.so /lib64/libpthread.so /lib64/libm.so /lib64/libdl.so" --with-avx-512-kernels --with-memalign=64 --with-x=0 --with-clanguage=C --with-scalapack=0 --with-metis=1 --with-metis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/metis-5.1.0-2uxjs6gihdopyqjjyapxloxmopt3fyuf --with-hdf5=1 --with-hdf5-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/hdf5-1.10.5-4l2oqer7h7evmjcweba5iym767fnvn4g --with-hypre=0 --with-parmetis=1 --with-parmetis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/parmetis-4.0.3-ilq6ip5ckg7shv5pbbqpnqoihqag4x4e --with-mumps=0 --with-trilinos=0 --with-fftw=1 --with-fftw-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/fftw-3.3.8-rfi7e56hwc7gcek5w5er3evkb7cefks2 --with-superlu_dist=0 --with-suitesparse=0 --with-zlib-include=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/include --with-zlib-lib="-L/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/lib -lz" --with-zlib=1 [38]PETSC ERROR: #1 VecView_MPI_HDF5() line 814 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [38]PETSC ERROR: #2 VecView_MPI() line 951 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [38]PETSC ERROR: #3 VecView() line 574 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/interface/vector.c [38]PETSC ERROR: #4 main() line 47 in ex10.c [38]PETSC ERROR: PETSc Option Table entries: [38]PETSC ERROR: -log_view [38]PETSC ERROR: -m 268435456 [38]PETSC ERROR: ----------------End of Error Message -------send entire error message to petsc-maint@mcs.anl.gov---------- application called MPI_Abort(MPI_COMM_WORLD, 76) - process 38 inux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicpc --with-fc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiifort --FC_LINKER_FLAGS=-lintlc --with-precision=double --with-scalar-type=complex --with-shared-libraries=1 --with-debugging=0 --with-64-bit-indices=1 COPTFLAGS= FOPTFLAGS= CXXOPTFLAGS= --with-blaslapack-lib="/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_intel_lp64.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_sequential.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_core.so /lib64/libpthread.so /lib64/libm.so /lib64/libdl.so" --with-avx-512-kernels --with-memalign=64 --with-x=0 --with-clanguage=C --with-scalapack=0 --with-metis=1 --with-metis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/metis-5.1.0-2uxjs6gihdopyqjjyapxloxmopt3fyuf --with-hdf5=1 --with-hdf5-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/hdf5-1.10.5-4l2oqer7h7evmjcweba5iym767fnvn4g --with-hypre=0 --with-parmetis=1 --with-parmetis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/parmetis-4.0.3-ilq6ip5ckg7shv5pbbqpnqoihqag4x4e --with-mumps=0 --with-trilinos=0 --with-fftw=1 --with-fftw-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/fftw-3.3.8-rfi7e56hwc7gcek5w5er3evkb7cefks2 --with-superlu_dist=0 --with-suitesparse=0 --with-zlib-include=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/include --with-zlib-lib="-L/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/lib -lz" --with-zlib=1 [39]PETSC ERROR: #1 VecView_MPI_HDF5() line 814 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [39]PETSC ERROR: #2 VecView_MPI() line 951 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [39]PETSC ERROR: #3 VecView() line 574 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/interface/vector.c [39]PETSC ERROR: #4 main() line 47 in ex10.c [39]PETSC ERROR: PETSc Option Table entries: [39]PETSC ERROR: -log_view [39]PETSC ERROR: -m 268435456 [39]PETSC ERROR: ----------------End of Error Message -------send entire error message to petsc-maint@mcs.anl.gov---------- application called MPI_Abort(MPI_COMM_WORLD, 76) - process 39 inux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicpc --with-fc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiifort --FC_LINKER_FLAGS=-lintlc --with-precision=double --with-scalar-type=complex --with-shared-libraries=1 --with-debugging=0 --with-64-bit-indices=1 COPTFLAGS= FOPTFLAGS= CXXOPTFLAGS= --with-blaslapack-lib="/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_intel_lp64.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_sequential.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_core.so /lib64/libpthread.so /lib64/libm.so /lib64/libdl.so" --with-avx-512-kernels --with-memalign=64 --with-x=0 --with-clanguage=C --with-scalapack=0 --with-metis=1 --with-metis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/metis-5.1.0-2uxjs6gihdopyqjjyapxloxmopt3fyuf --with-hdf5=1 --with-hdf5-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/hdf5-1.10.5-4l2oqer7h7evmjcweba5iym767fnvn4g --with-hypre=0 --with-parmetis=1 --with-parmetis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/parmetis-4.0.3-ilq6ip5ckg7shv5pbbqpnqoihqag4x4e --with-mumps=0 --with-trilinos=0 --with-fftw=1 --with-fftw-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/fftw-3.3.8-rfi7e56hwc7gcek5w5er3evkb7cefks2 --with-superlu_dist=0 --with-suitesparse=0 --with-zlib-include=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/include --with-zlib-lib="-L/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/lib -lz" --with-zlib=1 [41]PETSC ERROR: #1 VecView_MPI_HDF5() line 814 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [41]PETSC ERROR: #2 VecView_MPI() line 951 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [41]PETSC ERROR: #3 VecView() line 574 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/interface/vector.c [41]PETSC ERROR: #4 main() line 47 in ex10.c [41]PETSC ERROR: PETSc Option Table entries: [41]PETSC ERROR: -log_view [41]PETSC ERROR: -m 268435456 [41]PETSC ERROR: ----------------End of Error Message -------send entire error message to petsc-maint@mcs.anl.gov---------- application called MPI_Abort(MPI_COMM_WORLD, 76) - process 41 inux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicpc --with-fc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiifort --FC_LINKER_FLAGS=-lintlc --with-precision=double --with-scalar-type=complex --with-shared-libraries=1 --with-debugging=0 --with-64-bit-indices=1 COPTFLAGS= FOPTFLAGS= CXXOPTFLAGS= --with-blaslapack-lib="/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_intel_lp64.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_sequential.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_core.so /lib64/libpthread.so /lib64/libm.so /lib64/libdl.so" --with-avx-512-kernels --with-memalign=64 --with-x=0 --with-clanguage=C --with-scalapack=0 --with-metis=1 --with-metis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/metis-5.1.0-2uxjs6gihdopyqjjyapxloxmopt3fyuf --with-hdf5=1 --with-hdf5-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/hdf5-1.10.5-4l2oqer7h7evmjcweba5iym767fnvn4g --with-hypre=0 --with-parmetis=1 --with-parmetis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/parmetis-4.0.3-ilq6ip5ckg7shv5pbbqpnqoihqag4x4e --with-mumps=0 --with-trilinos=0 --with-fftw=1 --with-fftw-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/fftw-3.3.8-rfi7e56hwc7gcek5w5er3evkb7cefks2 --with-superlu_dist=0 --with-suitesparse=0 --with-zlib-include=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/include --with-zlib-lib="-L/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/lib -lz" --with-zlib=1 [43]PETSC ERROR: #1 VecView_MPI_HDF5() line 814 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [43]PETSC ERROR: #2 VecView_MPI() line 951 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [43]PETSC ERROR: #3 VecView() line 574 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/interface/vector.c [43]PETSC ERROR: #4 main() line 47 in ex10.c [43]PETSC ERROR: PETSc Option Table entries: [43]PETSC ERROR: -log_view [43]PETSC ERROR: -m 268435456 [43]PETSC ERROR: ----------------End of Error Message -------send entire error message to petsc-maint@mcs.anl.gov---------- application called MPI_Abort(MPI_COMM_WORLD, 76) - process 43 inux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicpc --with-fc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiifort --FC_LINKER_FLAGS=-lintlc --with-precision=double --with-scalar-type=complex --with-shared-libraries=1 --with-debugging=0 --with-64-bit-indices=1 COPTFLAGS= FOPTFLAGS= CXXOPTFLAGS= --with-blaslapack-lib="/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_intel_lp64.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_sequential.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_core.so /lib64/libpthread.so /lib64/libm.so /lib64/libdl.so" --with-avx-512-kernels --with-memalign=64 --with-x=0 --with-clanguage=C --with-scalapack=0 --with-metis=1 --with-metis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/metis-5.1.0-2uxjs6gihdopyqjjyapxloxmopt3fyuf --with-hdf5=1 --with-hdf5-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/hdf5-1.10.5-4l2oqer7h7evmjcweba5iym767fnvn4g --with-hypre=0 --with-parmetis=1 --with-parmetis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/parmetis-4.0.3-ilq6ip5ckg7shv5pbbqpnqoihqag4x4e --with-mumps=0 --with-trilinos=0 --with-fftw=1 --with-fftw-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/fftw-3.3.8-rfi7e56hwc7gcek5w5er3evkb7cefks2 --with-superlu_dist=0 --with-suitesparse=0 --with-zlib-include=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/include --with-zlib-lib="-L/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/lib -lz" --with-zlib=1 [44]PETSC ERROR: #1 VecView_MPI_HDF5() line 814 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [44]PETSC ERROR: #2 VecView_MPI() line 951 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [44]PETSC ERROR: #3 VecView() line 574 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/interface/vector.c [44]PETSC ERROR: #4 main() line 47 in ex10.c [44]PETSC ERROR: PETSc Option Table entries: [44]PETSC ERROR: -log_view [44]PETSC ERROR: -m 268435456 [44]PETSC ERROR: ----------------End of Error Message -------send entire error message to petsc-maint@mcs.anl.gov---------- application called MPI_Abort(MPI_COMM_WORLD, 76) - process 44 inux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicpc --with-fc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiifort --FC_LINKER_FLAGS=-lintlc --with-precision=double --with-scalar-type=complex --with-shared-libraries=1 --with-debugging=0 --with-64-bit-indices=1 COPTFLAGS= FOPTFLAGS= CXXOPTFLAGS= --with-blaslapack-lib="/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_intel_lp64.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_sequential.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_core.so /lib64/libpthread.so /lib64/libm.so /lib64/libdl.so" --with-avx-512-kernels --with-memalign=64 --with-x=0 --with-clanguage=C --with-scalapack=0 --with-metis=1 --with-metis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/metis-5.1.0-2uxjs6gihdopyqjjyapxloxmopt3fyuf --with-hdf5=1 --with-hdf5-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/hdf5-1.10.5-4l2oqer7h7evmjcweba5iym767fnvn4g --with-hypre=0 --with-parmetis=1 --with-parmetis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/parmetis-4.0.3-ilq6ip5ckg7shv5pbbqpnqoihqag4x4e --with-mumps=0 --with-trilinos=0 --with-fftw=1 --with-fftw-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/fftw-3.3.8-rfi7e56hwc7gcek5w5er3evkb7cefks2 --with-superlu_dist=0 --with-suitesparse=0 --with-zlib-include=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/include --with-zlib-lib="-L/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/lib -lz" --with-zlib=1 [45]PETSC ERROR: #1 VecView_MPI_HDF5() line 814 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [45]PETSC ERROR: #2 VecView_MPI() line 951 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [45]PETSC ERROR: #3 VecView() line 574 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/interface/vector.c [45]PETSC ERROR: #4 main() line 47 in ex10.c [45]PETSC ERROR: PETSc Option Table entries: [45]PETSC ERROR: -log_view [45]PETSC ERROR: -m 268435456 [45]PETSC ERROR: ----------------End of Error Message -------send entire error message to petsc-maint@mcs.anl.gov---------- application called MPI_Abort(MPI_COMM_WORLD, 76) - process 45 inux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicpc --with-fc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiifort --FC_LINKER_FLAGS=-lintlc --with-precision=double --with-scalar-type=complex --with-shared-libraries=1 --with-debugging=0 --with-64-bit-indices=1 COPTFLAGS= FOPTFLAGS= CXXOPTFLAGS= --with-blaslapack-lib="/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_intel_lp64.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_sequential.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_core.so /lib64/libpthread.so /lib64/libm.so /lib64/libdl.so" --with-avx-512-kernels --with-memalign=64 --with-x=0 --with-clanguage=C --with-scalapack=0 --with-metis=1 --with-metis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/metis-5.1.0-2uxjs6gihdopyqjjyapxloxmopt3fyuf --with-hdf5=1 --with-hdf5-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/hdf5-1.10.5-4l2oqer7h7evmjcweba5iym767fnvn4g --with-hypre=0 --with-parmetis=1 --with-parmetis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/parmetis-4.0.3-ilq6ip5ckg7shv5pbbqpnqoihqag4x4e --with-mumps=0 --with-trilinos=0 --with-fftw=1 --with-fftw-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/fftw-3.3.8-rfi7e56hwc7gcek5w5er3evkb7cefks2 --with-superlu_dist=0 --with-suitesparse=0 --with-zlib-include=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/include --with-zlib-lib="-L/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/lib -lz" --with-zlib=1 [47]PETSC ERROR: #1 VecView_MPI_HDF5() line 814 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [47]PETSC ERROR: #2 VecView_MPI() line 951 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [47]PETSC ERROR: #3 VecView() line 574 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/interface/vector.c [47]PETSC ERROR: #4 main() line 47 in ex10.c [47]PETSC ERROR: PETSc Option Table entries: [47]PETSC ERROR: -log_view [47]PETSC ERROR: -m 268435456 [47]PETSC ERROR: ----------------End of Error Message -------send entire error message to petsc-maint@mcs.anl.gov---------- application called MPI_Abort(MPI_COMM_WORLD, 76) - process 47 inux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicpc --with-fc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiifort --FC_LINKER_FLAGS=-lintlc --with-precision=double --with-scalar-type=complex --with-shared-libraries=1 --with-debugging=0 --with-64-bit-indices=1 COPTFLAGS= FOPTFLAGS= CXXOPTFLAGS= --with-blaslapack-lib="/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_intel_lp64.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_sequential.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_core.so /lib64/libpthread.so /lib64/libm.so /lib64/libdl.so" --with-avx-512-kernels --with-memalign=64 --with-x=0 --with-clanguage=C --with-scalapack=0 --with-metis=1 --with-metis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/metis-5.1.0-2uxjs6gihdopyqjjyapxloxmopt3fyuf --with-hdf5=1 --with-hdf5-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/hdf5-1.10.5-4l2oqer7h7evmjcweba5iym767fnvn4g --with-hypre=0 --with-parmetis=1 --with-parmetis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/parmetis-4.0.3-ilq6ip5ckg7shv5pbbqpnqoihqag4x4e --with-mumps=0 --with-trilinos=0 --with-fftw=1 --with-fftw-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/fftw-3.3.8-rfi7e56hwc7gcek5w5er3evkb7cefks2 --with-superlu_dist=0 --with-suitesparse=0 --with-zlib-include=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/include --with-zlib-lib="-L/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/lib -lz" --with-zlib=1 [49]PETSC ERROR: #1 VecView_MPI_HDF5() line 814 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [49]PETSC ERROR: #2 VecView_MPI() line 951 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [49]PETSC ERROR: #3 VecView() line 574 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/interface/vector.c [49]PETSC ERROR: #4 main() line 47 in ex10.c [49]PETSC ERROR: PETSc Option Table entries: [49]PETSC ERROR: -log_view [49]PETSC ERROR: -m 268435456 [49]PETSC ERROR: ----------------End of Error Message -------send entire error message to petsc-maint@mcs.anl.gov---------- application called MPI_Abort(MPI_COMM_WORLD, 76) - process 49 inux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicpc --with-fc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiifort --FC_LINKER_FLAGS=-lintlc --with-precision=double --with-scalar-type=complex --with-shared-libraries=1 --with-debugging=0 --with-64-bit-indices=1 COPTFLAGS= FOPTFLAGS= CXXOPTFLAGS= --with-blaslapack-lib="/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_intel_lp64.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_sequential.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_core.so /lib64/libpthread.so /lib64/libm.so /lib64/libdl.so" --with-avx-512-kernels --with-memalign=64 --with-x=0 --with-clanguage=C --with-scalapack=0 --with-metis=1 --with-metis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/metis-5.1.0-2uxjs6gihdopyqjjyapxloxmopt3fyuf --with-hdf5=1 --with-hdf5-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/hdf5-1.10.5-4l2oqer7h7evmjcweba5iym767fnvn4g --with-hypre=0 --with-parmetis=1 --with-parmetis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/parmetis-4.0.3-ilq6ip5ckg7shv5pbbqpnqoihqag4x4e --with-mumps=0 --with-trilinos=0 --with-fftw=1 --with-fftw-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/fftw-3.3.8-rfi7e56hwc7gcek5w5er3evkb7cefks2 --with-superlu_dist=0 --with-suitesparse=0 --with-zlib-include=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/include --with-zlib-lib="-L/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/lib -lz" --with-zlib=1 [50]PETSC ERROR: #1 VecView_MPI_HDF5() line 814 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [50]PETSC ERROR: #2 VecView_MPI() line 951 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [50]PETSC ERROR: #3 VecView() line 574 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/interface/vector.c [50]PETSC ERROR: #4 main() line 47 in ex10.c [50]PETSC ERROR: PETSc Option Table entries: [50]PETSC ERROR: -log_view [50]PETSC ERROR: -m 268435456 [50]PETSC ERROR: ----------------End of Error Message -------send entire error message to petsc-maint@mcs.anl.gov---------- application called MPI_Abort(MPI_COMM_WORLD, 76) - process 50 inux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicpc --with-fc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiifort --FC_LINKER_FLAGS=-lintlc --with-precision=double --with-scalar-type=complex --with-shared-libraries=1 --with-debugging=0 --with-64-bit-indices=1 COPTFLAGS= FOPTFLAGS= CXXOPTFLAGS= --with-blaslapack-lib="/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_intel_lp64.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_sequential.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_core.so /lib64/libpthread.so /lib64/libm.so /lib64/libdl.so" --with-avx-512-kernels --with-memalign=64 --with-x=0 --with-clanguage=C --with-scalapack=0 --with-metis=1 --with-metis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/metis-5.1.0-2uxjs6gihdopyqjjyapxloxmopt3fyuf --with-hdf5=1 --with-hdf5-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/hdf5-1.10.5-4l2oqer7h7evmjcweba5iym767fnvn4g --with-hypre=0 --with-parmetis=1 --with-parmetis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/parmetis-4.0.3-ilq6ip5ckg7shv5pbbqpnqoihqag4x4e --with-mumps=0 --with-trilinos=0 --with-fftw=1 --with-fftw-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/fftw-3.3.8-rfi7e56hwc7gcek5w5er3evkb7cefks2 --with-superlu_dist=0 --with-suitesparse=0 --with-zlib-include=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/include --with-zlib-lib="-L/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/lib -lz" --with-zlib=1 [52]PETSC ERROR: #1 VecView_MPI_HDF5() line 814 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [52]PETSC ERROR: #2 VecView_MPI() line 951 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [52]PETSC ERROR: #3 VecView() line 574 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/interface/vector.c [52]PETSC ERROR: #4 main() line 47 in ex10.c [52]PETSC ERROR: PETSc Option Table entries: [52]PETSC ERROR: -log_view [52]PETSC ERROR: -m 268435456 [52]PETSC ERROR: ----------------End of Error Message -------send entire error message to petsc-maint@mcs.anl.gov---------- application called MPI_Abort(MPI_COMM_WORLD, 76) - process 52 inux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicpc --with-fc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiifort --FC_LINKER_FLAGS=-lintlc --with-precision=double --with-scalar-type=complex --with-shared-libraries=1 --with-debugging=0 --with-64-bit-indices=1 COPTFLAGS= FOPTFLAGS= CXXOPTFLAGS= --with-blaslapack-lib="/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_intel_lp64.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_sequential.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_core.so /lib64/libpthread.so /lib64/libm.so /lib64/libdl.so" --with-avx-512-kernels --with-memalign=64 --with-x=0 --with-clanguage=C --with-scalapack=0 --with-metis=1 --with-metis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/metis-5.1.0-2uxjs6gihdopyqjjyapxloxmopt3fyuf --with-hdf5=1 --with-hdf5-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/hdf5-1.10.5-4l2oqer7h7evmjcweba5iym767fnvn4g --with-hypre=0 --with-parmetis=1 --with-parmetis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/parmetis-4.0.3-ilq6ip5ckg7shv5pbbqpnqoihqag4x4e --with-mumps=0 --with-trilinos=0 --with-fftw=1 --with-fftw-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/fftw-3.3.8-rfi7e56hwc7gcek5w5er3evkb7cefks2 --with-superlu_dist=0 --with-suitesparse=0 --with-zlib-include=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/include --with-zlib-lib="-L/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/lib -lz" --with-zlib=1 [53]PETSC ERROR: #1 VecView_MPI_HDF5() line 814 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [53]PETSC ERROR: #2 VecView_MPI() line 951 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [53]PETSC ERROR: #3 VecView() line 574 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/interface/vector.c [53]PETSC ERROR: #4 main() line 47 in ex10.c [53]PETSC ERROR: PETSc Option Table entries: [53]PETSC ERROR: -log_view [53]PETSC ERROR: -m 268435456 [53]PETSC ERROR: ----------------End of Error Message -------send entire error message to petsc-maint@mcs.anl.gov---------- application called MPI_Abort(MPI_COMM_WORLD, 76) - process 53 inux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicpc --with-fc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiifort --FC_LINKER_FLAGS=-lintlc --with-precision=double --with-scalar-type=complex --with-shared-libraries=1 --with-debugging=0 --with-64-bit-indices=1 COPTFLAGS= FOPTFLAGS= CXXOPTFLAGS= --with-blaslapack-lib="/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_intel_lp64.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_sequential.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_core.so /lib64/libpthread.so /lib64/libm.so /lib64/libdl.so" --with-avx-512-kernels --with-memalign=64 --with-x=0 --with-clanguage=C --with-scalapack=0 --with-metis=1 --with-metis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/metis-5.1.0-2uxjs6gihdopyqjjyapxloxmopt3fyuf --with-hdf5=1 --with-hdf5-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/hdf5-1.10.5-4l2oqer7h7evmjcweba5iym767fnvn4g --with-hypre=0 --with-parmetis=1 --with-parmetis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/parmetis-4.0.3-ilq6ip5ckg7shv5pbbqpnqoihqag4x4e --with-mumps=0 --with-trilinos=0 --with-fftw=1 --with-fftw-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/fftw-3.3.8-rfi7e56hwc7gcek5w5er3evkb7cefks2 --with-superlu_dist=0 --with-suitesparse=0 --with-zlib-include=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/include --with-zlib-lib="-L/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/lib -lz" --with-zlib=1 [55]PETSC ERROR: #1 VecView_MPI_HDF5() line 814 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [55]PETSC ERROR: #2 VecView_MPI() line 951 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [55]PETSC ERROR: #3 VecView() line 574 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/interface/vector.c [55]PETSC ERROR: #4 main() line 47 in ex10.c [55]PETSC ERROR: PETSc Option Table entries: [55]PETSC ERROR: -log_view [55]PETSC ERROR: -m 268435456 [55]PETSC ERROR: ----------------End of Error Message -------send entire error message to petsc-maint@mcs.anl.gov---------- application called MPI_Abort(MPI_COMM_WORLD, 76) - process 55 inux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiicpc --with-fc=/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mpi-2018.3.222-4aoglyb6zfpaydn6iuiz63wyj3soolv2/compilers_and_libraries_2018.3.222/linux/mpi/intel64/bin/mpiifort --FC_LINKER_FLAGS=-lintlc --with-precision=double --with-scalar-type=complex --with-shared-libraries=1 --with-debugging=0 --with-64-bit-indices=1 COPTFLAGS= FOPTFLAGS= CXXOPTFLAGS= --with-blaslapack-lib="/blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_intel_lp64.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_sequential.so /blues/gpfs/home/software/spack-0.10.1/opt/spack/linux-centos7-x86_64/intel-18.0.3/intel-mkl-2018.3.222-6ff5hhpjd6k3y4uvcg4mrthoqj3e3ok4/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64/libmkl_core.so /lib64/libpthread.so /lib64/libm.so /lib64/libdl.so" --with-avx-512-kernels --with-memalign=64 --with-x=0 --with-clanguage=C --with-scalapack=0 --with-metis=1 --with-metis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/metis-5.1.0-2uxjs6gihdopyqjjyapxloxmopt3fyuf --with-hdf5=1 --with-hdf5-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/hdf5-1.10.5-4l2oqer7h7evmjcweba5iym767fnvn4g --with-hypre=0 --with-parmetis=1 --with-parmetis-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/parmetis-4.0.3-ilq6ip5ckg7shv5pbbqpnqoihqag4x4e --with-mumps=0 --with-trilinos=0 --with-fftw=1 --with-fftw-dir=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/fftw-3.3.8-rfi7e56hwc7gcek5w5er3evkb7cefks2 --with-superlu_dist=0 --with-suitesparse=0 --with-zlib-include=/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/include --with-zlib-lib="-L/blues/gpfs/home/sajid/packages/spack/opt/spack/linux-centos7-x86_64/intel-18.0.3/zlib-1.2.11-6kmiiipb73pscb6ruoi5xceamyzvgrmu/lib -lz" --with-zlib=1 [59]PETSC ERROR: #1 VecView_MPI_HDF5() line 814 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [59]PETSC ERROR: #2 VecView_MPI() line 951 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/impls/mpi/pdvec.c [59]PETSC ERROR: #3 VecView() line 574 in /scratch/sajid/spack-stage/spack-stage-GN2fOu/spack-src/src/vec/vec/interface/vector.c [59]PETSC ERROR: #4 main() line 47 in ex10.c [59]PETSC ERROR: PETSc Option Table entries: [59]PETSC ERROR: -log_view [59]PETSC ERROR: -m 268435456 [59]PETSC ERROR: ----------------End of Error Message -------send entire error message to petsc-maint@mcs.anl.gov---------- application called MPI_Abort(MPI_COMM_WORLD, 76) - process 59 srun: error: apsxrmd-0004: tasks 192-255: Killed srun: error: apsxrmd-0003: tasks 128-191: Killed srun: error: apsxrmd-0002: tasks 64-127: Killed srun: error: apsxrmd-0001: tasks 0-63: Killed