<div dir="ltr"><div dir="ltr">On Wed, Aug 21, 2019 at 8:35 AM Jian Zhang - 3ME <<a href="mailto:J.Zhang-10@tudelft.nl">J.Zhang-10@tudelft.nl</a>> wrote:<br></div><div class="gmail_quote"><blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left:1px solid rgb(204,204,204);padding-left:1ex">
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<p>Hi Matthew,</p>
<p>That is ok. May I ask you one more question?</p>
<p>Sorry. I just start to learn how to use DMPLex. If I have an msh file including the triangular elements (t3). After I use DMPlex to read this mesh, how can I know the element type (actually which is t3) by using the functions inside DMPlex?</p></div></div></blockquote><div>They are cells with cone size 3.</div><div><br></div><div> Matt</div><div> </div><blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left:1px solid rgb(204,204,204);padding-left:1ex"><div><div id="gmail-m_5281178607944571329divtagdefaultwrapper" style="font-size:12pt;color:rgb(0,0,0);font-family:Calibri,Helvetica,sans-serif" dir="ltr">
<p>Best,</p>
<p>Jian</p>
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<div id="gmail-m_5281178607944571329divRplyFwdMsg" dir="ltr"><font face="Calibri, sans-serif" style="font-size:11pt" color="#000000"><b>From:</b> Matthew Knepley <<a href="mailto:knepley@gmail.com" target="_blank">knepley@gmail.com</a>><br>
<b>Sent:</b> 21 August 2019 14:24:56<br>
<b>To:</b> Jian Zhang - 3ME<br>
<b>Cc:</b> Jed Brown; <a href="mailto:petsc-users@mcs.anl.gov" target="_blank">petsc-users@mcs.anl.gov</a><br>
<b>Subject:</b> Re: [petsc-users] Getting the connectivity from DMPlex</font>
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<div dir="ltr">On Wed, Aug 21, 2019 at 8:21 AM Jian Zhang - 3ME <<a href="mailto:J.Zhang-10@tudelft.nl" target="_blank">J.Zhang-10@tudelft.nl</a>> wrote:<br>
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<p>Hi Matthew,</p>
<p>Thanks for your answer. I just looked at the pestc4py 3.11.0 (I think it is the newest one). </p>
<p>Actually, I did not find DMPlexGetClosure function in the DMPlex.pyx, also not in DM.pyx.</p>
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<div>Sorry, I messed up the name in my mail. Its getTransitiveClosure()</div>
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<div> <a href="https://bitbucket.org/petsc/petsc4py/src/9598d8fb2bb0baa79f99ebf76991ddecd1fd173e/src/PETSc/DMPlex.pyx#lines-332" target="_blank">
https://bitbucket.org/petsc/petsc4py/src/9598d8fb2bb0baa79f99ebf76991ddecd1fd173e/src/PETSc/DMPlex.pyx#lines-332</a></div>
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<div> Thanks,</div>
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<div> Matt </div>
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<p>Best,</p>
<p>Jian</p>
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<div id="gmail-m_5281178607944571329gmail-m_9194812596702914398divRplyFwdMsg" dir="ltr"><font face="Calibri, sans-serif" style="font-size:11pt" color="#000000"><b>From:</b> Matthew Knepley <<a href="mailto:knepley@gmail.com" target="_blank">knepley@gmail.com</a>><br>
<b>Sent:</b> 21 August 2019 14:03:19<br>
<b>To:</b> Jian Zhang - 3ME<br>
<b>Cc:</b> Jed Brown; <a href="mailto:petsc-users@mcs.anl.gov" target="_blank">petsc-users@mcs.anl.gov</a><br>
<b>Subject:</b> Re: [petsc-users] Getting the connectivity from DMPlex</font>
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<div dir="ltr">On Wed, Aug 21, 2019 at 7:48 AM Jian Zhang - 3ME via petsc-users <<a href="mailto:petsc-users@mcs.anl.gov" target="_blank">petsc-users@mcs.anl.gov</a>> wrote:<br>
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<p>Hi Jed,</p>
<p>Thank you very much. I tried to use DMPlexGetCone, but the output is the edge ids, not the vertice ids. For the function <span>DMPlexGetClosureIndices, I can not find it in petsc4py. Do you know any alternative ways to solve this?</span></p>
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<div>DMPlexGetClosure() should be in petsc4py. It also returns orientations, which you can just filter out.</div>
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<div> Thanks,</div>
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<div> Matt</div>
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<p>Best,</p>
<p>Jian</p>
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<font face="Calibri, sans-serif" color="#000000" style="font-size:11pt"><b>From:</b> Jed Brown <<a href="mailto:jed@jedbrown.org" target="_blank">jed@jedbrown.org</a>><br>
<b>Sent:</b> 21 August 2019 13:42:41<br>
<b>To:</b> Jian Zhang - 3ME; <a href="mailto:petsc-users@mcs.anl.gov" target="_blank">
petsc-users@mcs.anl.gov</a><br>
<b>Subject:</b> Re: [petsc-users] Getting the connectivity from DMPlex</font>
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<div class="gmail-m_5281178607944571329gmail-m_9194812596702914398gmail-m_4756795434960579141PlainText">Jian Zhang - 3ME via petsc-users <<a href="mailto:petsc-users@mcs.anl.gov" target="_blank">petsc-users@mcs.anl.gov</a>> writes:<br>
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> Hi guys,<br>
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> I am trying to get the element connectivity from DMPlex. The input is the element id, and the output should be the vertice ids. Which function should I use to achieve this? Thanks in advance.<br>
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See DMPlexGetCone or DMPlexGetClosureIndices.<br>
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<div>What most experimenters take for granted before they begin their experiments is infinitely more interesting than any results to which their experiments lead.<br>
-- Norbert Wiener</div>
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<div>What most experimenters take for granted before they begin their experiments is infinitely more interesting than any results to which their experiments lead.<br>
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<div><a href="http://www.cse.buffalo.edu/~knepley/" target="_blank">https://www.cse.buffalo.edu/~knepley/</a><br>
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</blockquote></div><br clear="all"><div><br></div>-- <br><div dir="ltr" class="gmail_signature"><div dir="ltr"><div><div dir="ltr"><div><div dir="ltr"><div>What most experimenters take for granted before they begin their experiments is infinitely more interesting than any results to which their experiments lead.<br>-- Norbert Wiener</div><div><br></div><div><a href="http://www.cse.buffalo.edu/~knepley/" target="_blank">https://www.cse.buffalo.edu/~knepley/</a><br></div></div></div></div></div></div></div></div>