This file contains any messages produced by compilers while running configure, to aid debugging if configure makes a mistake. It was created by libmesh configure 1.2.1, which was generated by GNU Autoconf 2.69. Invocation command line was $ ../libMesh/configure --prefix=/home/asbhalla/softwares/libMesh-Git/linux-opt --with-methods=opt PETSC_DIR=/home/asbhalla/softwares/PETSc-BitBucket/PETSc PETSC_ARCH=linux-opt CC=mpicc CXX=mpicxx FC=mpif90 F77=mpif90 --with-boost=/home/asbhalla/softwares/boost/1.67.0 --enable-exodus --enable-triangle --disable-glibcxx-debugging --disable-openmp --disable-perflog --disable-strict-lgpl --disable-pthreads --disable-cppthreads LDFLAGS=-L/lib64 ## --------- ## ## Platform. ## ## --------- ## hostname = master uname -m = x86_64 uname -r = 3.10.0-957.1.3.el7.x86_64 uname -s = Linux uname -v = #1 SMP Thu Nov 29 14:49:43 UTC 2018 /usr/bin/uname -p = x86_64 /bin/uname -X = unknown /bin/arch = x86_64 /usr/bin/arch -k = unknown /usr/convex/getsysinfo = unknown /usr/bin/hostinfo = unknown /bin/machine = unknown /usr/bin/oslevel = unknown /bin/universe = unknown PATH: /home/asbhalla/softwares/Git-2.1.2/bin PATH: /usr/local/mpi/intel/openmpi-4.0.0/bin PATH: /opt/intel/compilers_and_libraries_2018.2.199/linux/debugger/gui/intel64 PATH: /opt/intel/compilers_and_libraries_2018.2.199/linux/bin/intel64 PATH: /opt/intel/compilers_and_libraries_2018.2.199/linux/debugger/gdb/intel64/py26/bin PATH: /usr/lib64/qt-3.3/bin PATH: /usr/local/bin PATH: /usr/bin PATH: /usr/local/sbin PATH: /usr/sbin PATH: /opt/ibutils/bin PATH: /home/asbhalla/.local/bin PATH: /home/asbhalla/bin ## ----------- ## ## Core tests. ## ## ----------- ## configure:3650: result: --------------------------------------------- configure:3652: result: ----------- Configuring libMesh ------------- configure:3654: result: --------------------------------------------- configure:3696: checking build system type configure:3710: result: x86_64-unknown-linux-gnu configure:3730: checking host system type configure:3743: result: x86_64-unknown-linux-gnu configure:3763: checking target system type configure:3776: result: x86_64-unknown-linux-gnu configure:3851: checking for a BSD-compatible install configure:3919: result: /usr/bin/install -c configure:3930: checking whether build environment is sane configure:3985: result: yes configure:4136: checking for a thread-safe mkdir -p configure:4175: result: /usr/bin/mkdir -p configure:4182: checking for gawk configure:4198: found /usr/bin/gawk configure:4209: result: gawk configure:4220: checking whether make sets $(MAKE) configure:4242: result: yes configure:4271: checking whether make supports nested variables configure:4288: result: yes configure:4377: checking whether UID '523' is supported by ustar format configure:4380: result: yes configure:4387: checking whether GID '3001' is supported by ustar format configure:4390: result: yes configure:4398: checking how to create a ustar tar archive configure:4409: tar --version tar (GNU tar) 1.26 Copyright (C) 2011 Free Software Foundation, Inc. License GPLv3+: GNU GPL version 3 or later . This is free software: you are free to change and redistribute it. There is NO WARRANTY, to the extent permitted by law. Written by John Gilmore and Jay Fenlason. configure:4412: $? = 0 configure:4452: tardir=conftest.dir && eval tar --format=ustar -chf - "$tardir" >conftest.tar configure:4455: $? = 0 configure:4459: tar -xf - >> configure:4680: checking for perl configure:4698: found /usr/bin/perl configure:4710: result: /usr/bin/perl configure:4735: checking for style of include used by make configure:4763: result: GNU configure:4937: checking for C++ compiler version configure:4946: mpicxx --version >&5 icpc (ICC) 18.0.2 20180210 Copyright (C) 1985-2018 Intel Corporation. All rights reserved. configure:4957: $? = 0 configure:4946: mpicxx -v >&5 icpc version 18.0.2 (gcc version 4.8.5 compatibility) configure:4957: $? = 0 configure:4946: mpicxx -V >&5 Intel(R) C++ Intel(R) 64 Compiler for applications running on Intel(R) 64, Version 18.0.2.199 Build 20180210 Copyright (C) 1985-2018 Intel Corporation. All rights reserved. configure:4957: $? = 0 configure:4946: mpicxx -qversion >&5 icpc: command line warning #10006: ignoring unknown option '-qversion' icpc: command line error: no files specified; for help type "icpc -help" configure:4957: $? = 1 configure:4977: checking whether the C++ compiler works configure:4999: mpicxx -L/lib64 conftest.cpp >&5 configure:5003: $? = 0 configure:5051: result: yes configure:5054: checking for C++ compiler default output file name configure:5056: result: a.out configure:5062: checking for suffix of executables configure:5069: mpicxx -o conftest -L/lib64 conftest.cpp >&5 configure:5073: $? = 0 configure:5095: result: configure:5117: checking whether we are cross compiling configure:5125: mpicxx -o conftest -L/lib64 conftest.cpp >&5 configure:5129: $? = 0 configure:5136: ./conftest configure:5140: $? = 0 configure:5155: result: no configure:5160: checking for suffix of object files configure:5182: mpicxx -c conftest.cpp >&5 configure:5186: $? = 0 configure:5207: result: o configure:5211: checking whether we are using the GNU C++ compiler configure:5230: mpicxx -c conftest.cpp >&5 configure:5230: $? = 0 configure:5239: result: yes configure:5248: checking whether mpicxx accepts -g configure:5268: mpicxx -c -g conftest.cpp >&5 configure:5268: $? = 0 configure:5309: result: yes configure:5334: checking dependency style of mpicxx configure:5445: result: gcc3 configure:5773: result: <<< C++ compiler is Intel(R) icc 8.0 >>> configure:6026: checking for C compiler version configure:6035: mpicc --version >&5 icc (ICC) 18.0.2 20180210 Copyright (C) 1985-2018 Intel Corporation. All rights reserved. configure:6046: $? = 0 configure:6035: mpicc -v >&5 icc version 18.0.2 (gcc version 4.8.5 compatibility) configure:6046: $? = 0 configure:6035: mpicc -V >&5 Intel(R) C Intel(R) 64 Compiler for applications running on Intel(R) 64, Version 18.0.2.199 Build 20180210 Copyright (C) 1985-2018 Intel Corporation. All rights reserved. configure:6046: $? = 0 configure:6035: mpicc -qversion >&5 icc: command line warning #10006: ignoring unknown option '-qversion' icc: command line error: no files specified; for help type "icc -help" configure:6046: $? = 1 configure:6050: checking whether we are using the GNU C compiler configure:6069: mpicc -c conftest.c >&5 configure:6069: $? = 0 configure:6078: result: yes configure:6087: checking whether mpicc accepts -g configure:6107: mpicc -c -g conftest.c >&5 configure:6107: $? = 0 configure:6148: result: yes configure:6165: checking for mpicc option to accept ISO C89 configure:6228: mpicc -c conftest.c >&5 configure:6228: $? = 0 configure:6241: result: none needed configure:6266: checking whether mpicc understands -c and -o together configure:6288: mpicc -c conftest.c -o conftest2.o configure:6291: $? = 0 configure:6288: mpicc -c conftest.c -o conftest2.o configure:6291: $? = 0 configure:6303: result: yes configure:6322: checking dependency style of mpicc configure:6433: result: gcc3 configure:6598: checking for Fortran compiler version configure:6607: mpif90 --version >&5 ifort (IFORT) 18.0.2 20180210 Copyright (C) 1985-2018 Intel Corporation. All rights reserved. configure:6618: $? = 0 configure:6607: mpif90 -v >&5 ifort version 18.0.2 configure:6618: $? = 0 configure:6607: mpif90 -V >&5 Intel(R) Fortran Intel(R) 64 Compiler for applications running on Intel(R) 64, Version 18.0.2.199 Build 20180210 Copyright (C) 1985-2018 Intel Corporation. All rights reserved. configure:6618: $? = 0 configure:6607: mpif90 -qversion >&5 ifort: command line warning #10006: ignoring unknown option '-qversion' ifort: command line error: no files specified; for help type "ifort -help" configure:6618: $? = 1 configure:6627: checking whether we are using the GNU Fortran compiler configure:6640: mpif90 -c conftest.F >&5 conftest.F(3): error #5082: Syntax error, found END-OF-STATEMENT when expecting one of: => = . [ % ( : choke me ---------------^ compilation aborted for conftest.F (code 1) configure:6640: $? = 1 configure: failed program was: | program main | #ifndef __GNUC__ | choke me | #endif | | end configure:6649: result: no configure:6655: checking whether mpif90 accepts -g configure:6666: mpif90 -c -g conftest.f >&5 configure:6666: $? = 0 configure:6674: result: yes configure:6836: checking for Fortran 77 compiler version configure:6845: mpif90 --version >&5 ifort (IFORT) 18.0.2 20180210 Copyright (C) 1985-2018 Intel Corporation. All rights reserved. configure:6856: $? = 0 configure:6845: mpif90 -v >&5 ifort version 18.0.2 configure:6856: $? = 0 configure:6845: mpif90 -V >&5 Intel(R) Fortran Intel(R) 64 Compiler for applications running on Intel(R) 64, Version 18.0.2.199 Build 20180210 Copyright (C) 1985-2018 Intel Corporation. All rights reserved. configure:6856: $? = 0 configure:6845: mpif90 -qversion >&5 ifort: command line warning #10006: ignoring unknown option '-qversion' ifort: command line error: no files specified; for help type "ifort -help" configure:6856: $? = 1 configure:6865: checking whether we are using the GNU Fortran 77 compiler configure:6878: mpif90 -c conftest.F >&5 conftest.F(3): error #5082: Syntax error, found END-OF-STATEMENT when expecting one of: => = . [ % ( : choke me ---------------^ compilation aborted for conftest.F (code 1) configure:6878: $? = 1 configure: failed program was: | program main | #ifndef __GNUC__ | choke me | #endif | | end configure:6887: result: no configure:6893: checking whether mpif90 accepts -g configure:6904: mpif90 -c -g conftest.f >&5 configure:6904: $? = 0 configure:6912: result: yes configure:7232: checking whether mpicxx supports C++11 features by default configure:7268: mpicxx -c conftest.cpp >&5 conftest.cpp(16): error: expected a type specifier static_assert(sizeof(int) <= sizeof(T), "not big enough"); ^ conftest.cpp(16): error: expected a type specifier static_assert(sizeof(int) <= sizeof(T), "not big enough"); ^ conftest.cpp(16): error #303: explicit type is missing ("int" assumed) static_assert(sizeof(int) <= sizeof(T), "not big enough"); ^ conftest.cpp(19): error: space required between adjacent ">" delimiters of nested template argument lists (">>" is the right shift operator) typedef check> right_angle_brackets; ^ conftest.cpp(22): error #77: this declaration has no storage class or type specifier decltype(a) b; ^ conftest.cpp(22): error: expected a ";" decltype(a) b; ^ conftest.cpp(26): warning #3495: rvalue references are a C++11 feature check_type&& cr = static_cast(c); ^ conftest.cpp(28): error #303: explicit type is missing ("int" assumed) auto d = a; ^ conftest.cpp(28): error: a global-scope declaration may not have this storage class auto d = a; ^ conftest.cpp(29): error #303: explicit type is missing ("int" assumed) auto l = [](){}; ^ conftest.cpp(29): error: a global-scope declaration may not have this storage class auto l = [](){}; ^ conftest.cpp(29): warning #3496: lambda expressions are a C++11 feature auto l = [](){}; ^ conftest.cpp(29): error: no suitable conversion function from "lambda []()->void" to "int" exists auto l = [](){}; ^ conftest.cpp(34): error #77: this declaration has no storage class or type specifier constexpr int multiply (int x, int y) { return x * y; } ^ conftest.cpp(34): error: expected a ";" constexpr int multiply (int x, int y) { return x * y; } ^ conftest.cpp(38): warning #12: parsing restarts here after previous syntax error using MyCheck = check; ^ compilation aborted for conftest.cpp (code 2) configure:7268: $? = 2 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "libmesh" | #define PACKAGE_TARNAME "libmesh" | #define PACKAGE_VERSION "1.2.1" | #define PACKAGE_STRING "libmesh 1.2.1" | #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net" | #define PACKAGE_URL "http://libmesh.github.io" | #define CONFIGURE_INFO "../libMesh/configure '--prefix=/home/asbhalla/softwares/libMesh-Git/linux-opt' '--with-methods=opt' 'PETSC_DIR=/home/asbhalla/softwares/PETSc-BitBucket/PETSc' 'PETSC_ARCH=linux-opt' 'CC=mpicc' 'CXX=mpicxx' 'FC=mpif90' 'F77=mpif90' '--with-boost=/home/asbhalla/softwares/boost/1.67.0' '--enable-exodus' '--enable-triangle' '--disable-glibcxx-debugging' '--disable-openmp' '--disable-perflog' '--disable-strict-lgpl' '--disable-pthreads' '--disable-cppthreads' 'LDFLAGS=-L/lib64'" | #define PACKAGE "libmesh" | #define VERSION "1.2.1" | /* end confdefs.h. */ | | template | struct check | { | static_assert(sizeof(int) <= sizeof(T), "not big enough"); | }; | | typedef check> right_angle_brackets; | | int a; | decltype(a) b; | | typedef check check_type; | check_type c; | check_type&& cr = static_cast(c); | | auto d = a; | auto l = [](){}; | | // The compiler may evaluate something like: | // const int val = multiply(10, 10); | // at compile time. | constexpr int multiply (int x, int y) { return x * y; } | | // A minimally-conforming C++11 compiler must support alias declarations | template | using MyCheck = check; | configure:7275: result: no configure:7284: checking whether mpicxx supports C++11 features with -std=gnu++11 configure:7322: mpicxx -c -std=gnu++11 conftest.cpp >&5 configure:7322: $? = 0 configure:7331: result: yes configure:8403: result: <<< Configuring libMesh with methods "opt" >>> configure:8543: checking for C++11 std::move support configure:8581: mpicxx -c -std=gnu++11 -std=gnu++11 conftest.cpp >&5 configure:8581: $? = 0 configure:8584: result: yes configure:8627: checking for C++11 range-based for loop support configure:8665: mpicxx -c -std=gnu++11 -std=gnu++11 conftest.cpp >&5 configure:8665: $? = 0 configure:8668: result: yes configure:8711: checking for C++11 decltype support configure:8741: mpicxx -c -std=gnu++11 -std=gnu++11 conftest.cpp >&5 configure:8741: $? = 0 configure:8744: result: yes configure:8787: checking for C++11 rvalue references support configure:8819: mpicxx -c -std=gnu++11 -std=gnu++11 conftest.cpp >&5 configure:8819: $? = 0 configure:8822: result: yes configure:8865: checking for C++11 auto keyword support configure:8895: mpicxx -c -std=gnu++11 -std=gnu++11 conftest.cpp >&5 configure:8895: $? = 0 configure:8898: result: yes configure:8941: checking for C++11 lambda support configure:8978: mpicxx -c -std=gnu++11 -std=gnu++11 conftest.cpp >&5 configure:8978: $? = 0 configure:8981: result: yes configure:9024: checking for C++11 constexpr support configure:9055: mpicxx -c -std=gnu++11 -std=gnu++11 conftest.cpp >&5 configure:9055: $? = 0 configure:9058: result: yes configure:9101: checking for C++11 alias declarations support configure:9139: mpicxx -c -std=gnu++11 -std=gnu++11 conftest.cpp >&5 configure:9139: $? = 0 configure:9142: result: yes configure:9227: checking for C++11 std::shared_ptr support with opt flags configure:9248: mpicxx -c -std=gnu++11 -Kc++eh -Krtti -O2 -Ob2 -tpp6 -axiMK -unroll -w0 -vec_report0 -par_report0 -openmp_report0 -DNDEBUG -std=gnu++11 conftest.cpp >&5 icpc: command line remark #10148: option '-Ob2' not supported icpc: command line remark #10148: option '-tpp6' not supported icpc: command line remark #10148: option '-vec_report0' not supported icpc: command line remark #10148: option '-par_report0' not supported icpc: command line remark #10148: option '-openmp_report0' not supported configure:9248: $? = 0 configure:9252: result: yes configure:9308: checking for C++11 std::unique_ptr support configure:9347: mpicxx -c -std=gnu++11 -std=gnu++11 conftest.cpp >&5 configure:9347: $? = 0 configure:9350: result: yes configure:9393: checking for C++14 std::make_unique support configure:9427: mpicxx -c -std=gnu++11 -std=gnu++11 conftest.cpp >&5 conftest.cpp(33): error: namespace "std" has no member "make_unique" std::unique_ptr up = std::make_unique(42); ^ conftest.cpp(33): error: type name is not allowed std::unique_ptr up = std::make_unique(42); ^ compilation aborted for conftest.cpp (code 2) configure:9427: $? = 2 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "libmesh" | #define PACKAGE_TARNAME "libmesh" | #define PACKAGE_VERSION "1.2.1" | #define PACKAGE_STRING "libmesh 1.2.1" | #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net" | #define PACKAGE_URL "http://libmesh.github.io" | #define CONFIGURE_INFO "../libMesh/configure '--prefix=/home/asbhalla/softwares/libMesh-Git/linux-opt' '--with-methods=opt' 'PETSC_DIR=/home/asbhalla/softwares/PETSc-BitBucket/PETSc' 'PETSC_ARCH=linux-opt' 'CC=mpicc' 'CXX=mpicxx' 'FC=mpif90' 'F77=mpif90' '--with-boost=/home/asbhalla/softwares/boost/1.67.0' '--enable-exodus' '--enable-triangle' '--disable-glibcxx-debugging' '--disable-openmp' '--disable-perflog' '--disable-strict-lgpl' '--disable-pthreads' '--disable-cppthreads' 'LDFLAGS=-L/lib64'" | #define PACKAGE "libmesh" | #define VERSION "1.2.1" | #define HAVE_CXX11 1 | #define HAVE_CXX11_MOVE 1 | #define HAVE_CXX11_RANGEFOR 1 | #define HAVE_CXX11_DECLTYPE 1 | #define HAVE_CXX11_RVALUE_REFERENCES 1 | #define HAVE_CXX11_AUTO 1 | #define HAVE_CXX11_LAMBDA 1 | #define HAVE_CXX11_CONSTEXPR 1 | #define HAVE_CXX11_ALIAS_DECLARATIONS 1 | #define HAVE_CXX11_SHARED_PTR 1 | #define HAVE_CXX11_UNIQUE_PTR 1 | /* end confdefs.h. */ | | #include | | int | main () | { | | { | // Normally, you would use "auto" on the LHS here to avoid | // repeating the type name, but we are not testing auto here. | std::unique_ptr up = std::make_unique(42); | } // Foo deleted when up goes out of scope | | ; | return 0; | } configure:9446: result: no configure:9473: checking for C++11 std::make_unique workaround support configure:9516: mpicxx -c -std=gnu++11 -std=gnu++11 conftest.cpp >&5 configure:9516: $? = 0 configure:9519: result: yes configure:9562: checking for C++11 std::regex support configure:9600: mpicxx -o conftest -std=gnu++11 -std=gnu++11 -L/lib64 conftest.cpp >&5 configure:9600: $? = 0 configure:9600: ./conftest terminate called after throwing an instance of 'std::regex_error' what(): regex_error ../libMesh/configure: line 2407: 19982 Aborted (core dumped) ./conftest$ac_exeext configure:9600: $? = 134 configure: program exited with status 134 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "libmesh" | #define PACKAGE_TARNAME "libmesh" | #define PACKAGE_VERSION "1.2.1" | #define PACKAGE_STRING "libmesh 1.2.1" | #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net" | #define PACKAGE_URL "http://libmesh.github.io" | #define CONFIGURE_INFO "../libMesh/configure '--prefix=/home/asbhalla/softwares/libMesh-Git/linux-opt' '--with-methods=opt' 'PETSC_DIR=/home/asbhalla/softwares/PETSc-BitBucket/PETSc' 'PETSC_ARCH=linux-opt' 'CC=mpicc' 'CXX=mpicxx' 'FC=mpif90' 'F77=mpif90' '--with-boost=/home/asbhalla/softwares/boost/1.67.0' '--enable-exodus' '--enable-triangle' '--disable-glibcxx-debugging' '--disable-openmp' '--disable-perflog' '--disable-strict-lgpl' '--disable-pthreads' '--disable-cppthreads' 'LDFLAGS=-L/lib64'" | #define PACKAGE "libmesh" | #define VERSION "1.2.1" | #define HAVE_CXX11 1 | #define HAVE_CXX11_MOVE 1 | #define HAVE_CXX11_RANGEFOR 1 | #define HAVE_CXX11_DECLTYPE 1 | #define HAVE_CXX11_RVALUE_REFERENCES 1 | #define HAVE_CXX11_AUTO 1 | #define HAVE_CXX11_LAMBDA 1 | #define HAVE_CXX11_CONSTEXPR 1 | #define HAVE_CXX11_ALIAS_DECLARATIONS 1 | #define HAVE_CXX11_SHARED_PTR 1 | #define HAVE_CXX11_UNIQUE_PTR 1 | #define HAVE_CXX11_MAKE_UNIQUE_WORKAROUND 1 | /* end confdefs.h. */ | | #include | | int | main () | { | | std::regex integer_regex("(\\+|-)?[[:digit:]]+"); | std::regex_match("abc", integer_regex); | std::regex_match("123", integer_regex); | | ; | return 0; | } configure:9619: result: no configure:9649: checking for C++11 override keyword support configure:9683: mpicxx -c -std=gnu++11 -std=gnu++11 conftest.cpp >&5 configure:9683: $? = 0 configure:9686: result: yes configure:9729: checking for C++11 initializer list support configure:9760: mpicxx -c -std=gnu++11 -std=gnu++11 conftest.cpp >&5 configure:9760: $? = 0 configure:9763: result: yes configure:9806: checking for C++11 variadic template support configure:9846: mpicxx -c -std=gnu++11 -std=gnu++11 conftest.cpp >&5 configure:9846: $? = 0 configure:9849: result: yes configure:9892: checking for C++11 support configure:9938: mpicxx -c -std=gnu++11 -std=gnu++11 conftest.cpp >&5 configure:9938: $? = 0 configure:9941: result: yes configure:9984: checking for C++11 support configure:10041: mpicxx -c -std=gnu++11 -std=gnu++11 conftest.cpp >&5 configure:10041: $? = 0 configure:10044: result: yes configure:10098: checking for C++11 support configure:10235: mpicxx -c -std=gnu++11 -std=gnu++11 conftest.cpp >&5 conftest.cpp(76): error: namespace "std" has no member "is_trivially_copyable" << std::is_trivially_copyable::value // Not supported by GCC 4.6.3 with -std=c++0x ^ conftest.cpp(76): error: type name is not allowed << std::is_trivially_copyable::value // Not supported by GCC 4.6.3 with -std=c++0x ^ conftest.cpp(76): error: the global scope has no "value" << std::is_trivially_copyable::value // Not supported by GCC 4.6.3 with -std=c++0x ^ conftest.cpp(86): error: namespace "std" has no member "is_trivially_constructible" << std::is_trivially_constructible::value ^ conftest.cpp(86): error: type name is not allowed << std::is_trivially_constructible::value ^ conftest.cpp(86): error: the global scope has no "value" << std::is_trivially_constructible::value ^ conftest.cpp(89): error: namespace "std" has no member "is_trivially_default_constructible" << std::is_trivially_default_constructible::value ^ conftest.cpp(89): error: type name is not allowed << std::is_trivially_default_constructible::value ^ conftest.cpp(89): error: the global scope has no "value" << std::is_trivially_default_constructible::value ^ conftest.cpp(92): error: namespace "std" has no member "is_trivially_copy_constructible" << std::is_trivially_copy_constructible::value ^ conftest.cpp(92): error: type name is not allowed << std::is_trivially_copy_constructible::value ^ conftest.cpp(92): error: the global scope has no "value" << std::is_trivially_copy_constructible::value ^ conftest.cpp(95): error: namespace "std" has no member "is_trivially_move_constructible" << std::is_trivially_move_constructible::value ^ conftest.cpp(95): error: type name is not allowed << std::is_trivially_move_constructible::value ^ conftest.cpp(95): error: the global scope has no "value" << std::is_trivially_move_constructible::value ^ conftest.cpp(98): error: namespace "std" has no member "is_trivially_assignable" << std::is_trivially_assignable::value ^ conftest.cpp(98): error: type name is not allowed << std::is_trivially_assignable::value ^ conftest.cpp(98): error: type name is not allowed << std::is_trivially_assignable::value ^ conftest.cpp(98): error: the global scope has no "value" << std::is_trivially_assignable::value ^ conftest.cpp(101): error: namespace "std" has no member "is_trivially_copy_assignable" << std::is_trivially_copy_assignable::value ^ conftest.cpp(101): error: type name is not allowed << std::is_trivially_copy_assignable::value ^ conftest.cpp(101): error: the global scope has no "value" << std::is_trivially_copy_assignable::value ^ conftest.cpp(104): error: namespace "std" has no member "is_trivially_move_assignable" << std::is_trivially_move_assignable::value ^ conftest.cpp(104): error: type name is not allowed << std::is_trivially_move_assignable::value ^ conftest.cpp(104): error: the global scope has no "value" << std::is_trivially_move_assignable::value ^ conftest.cpp(143): error: qualified name is not allowed typedef std::aligned_union::type union_t; ^ conftest.cpp(143): error: expected a ";" typedef std::aligned_union::type union_t; ^ compilation aborted for conftest.cpp (code 2) configure:10235: $? = 2 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "libmesh" | #define PACKAGE_TARNAME "libmesh" | #define PACKAGE_VERSION "1.2.1" | #define PACKAGE_STRING "libmesh 1.2.1" | #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net" | #define PACKAGE_URL "http://libmesh.github.io" | #define CONFIGURE_INFO "../libMesh/configure '--prefix=/home/asbhalla/softwares/libMesh-Git/linux-opt' '--with-methods=opt' 'PETSC_DIR=/home/asbhalla/softwares/PETSc-BitBucket/PETSc' 'PETSC_ARCH=linux-opt' 'CC=mpicc' 'CXX=mpicxx' 'FC=mpif90' 'F77=mpif90' '--with-boost=/home/asbhalla/softwares/boost/1.67.0' '--enable-exodus' '--enable-triangle' '--disable-glibcxx-debugging' '--disable-openmp' '--disable-perflog' '--disable-strict-lgpl' '--disable-pthreads' '--disable-cppthreads' 'LDFLAGS=-L/lib64'" | #define PACKAGE "libmesh" | #define VERSION "1.2.1" | #define HAVE_CXX11 1 | #define HAVE_CXX11_MOVE 1 | #define HAVE_CXX11_RANGEFOR 1 | #define HAVE_CXX11_DECLTYPE 1 | #define HAVE_CXX11_RVALUE_REFERENCES 1 | #define HAVE_CXX11_AUTO 1 | #define HAVE_CXX11_LAMBDA 1 | #define HAVE_CXX11_CONSTEXPR 1 | #define HAVE_CXX11_ALIAS_DECLARATIONS 1 | #define HAVE_CXX11_SHARED_PTR 1 | #define HAVE_CXX11_UNIQUE_PTR 1 | #define HAVE_CXX11_MAKE_UNIQUE_WORKAROUND 1 | #define HAVE_CXX11_OVERRIDE 1 | #define HAVE_CXX11_INITIALIZER_LIST 1 | #define HAVE_CXX11_VARIADIC_TEMPLATES 1 | #define HAVE_CXX11_THREAD 1 | #define HAVE_CXX11_CONDITION_VARIABLE 1 | /* end confdefs.h. */ | | #include | #include | | // std::enable_if - the return type of the function is only defined if | // T is an integral type. Therefore, it's a *compile* error if you | // try to call it with a non-integral type. | template | typename std::enable_if::value, bool>::type | is_odd (T i) | { | return static_cast(i%2); | } | | // std::underlying_type - names the underlying type of an enum | enum e1 {}; | | // typedef (named fn_ptr) for a function that takes nothing and returns char. | typedef char (*fn_ptr)(); | | int | main () | { | | std::cout << std::is_void::value | // << std::is_null_pointer::value // C++14 | << std::is_integral::value | << std::is_floating_point::value | << std::is_array::value | << std::is_enum::value | << std::is_union::value | << std::is_class::value | << std::is_function::value | << std::is_pointer::value | << std::is_lvalue_reference::value | << std::is_rvalue_reference::value | << std::is_member_object_pointer::value | << std::is_fundamental::value | << std::is_arithmetic::value | << std::is_scalar::value | << std::is_object::value | << std::is_compound::value | << std::is_reference::value | << std::is_member_pointer::value | << std::is_const::value | << std::is_volatile::value | << std::is_trivial::value | << std::is_trivially_copyable::value // Not supported by GCC 4.6.3 with -std=c++0x | << std::is_standard_layout::value | << std::is_pod::value | << std::is_literal_type::value | << std::is_empty::value | << std::is_polymorphic::value | << std::is_abstract::value | << std::is_signed::value | << std::is_unsigned::value | << std::is_constructible::value | << std::is_trivially_constructible::value | << std::is_nothrow_constructible::value | << std::is_default_constructible::value | << std::is_trivially_default_constructible::value | << std::is_nothrow_default_constructible::value | << std::is_copy_constructible::value | << std::is_trivially_copy_constructible::value | << std::is_nothrow_copy_constructible::value | << std::is_move_constructible::value | << std::is_trivially_move_constructible::value | << std::is_nothrow_move_constructible::value | << std::is_assignable::value | << std::is_trivially_assignable::value | << std::is_nothrow_assignable::value | << std::is_copy_assignable::value | << std::is_trivially_copy_assignable::value | << std::is_nothrow_copy_assignable::value | << std::is_move_assignable::value | << std::is_trivially_move_assignable::value | << std::is_nothrow_move_assignable::value | << std::is_destructible::value | << std::is_trivially_destructible::value | << std::is_nothrow_destructible::value | << std::has_virtual_destructor::value | << std::alignment_of::value | << std::rank::value | << std::extent::value | << std::is_same::value | << std::is_base_of::value | << std::is_convertible::value | << std::is_same::type>::value // std::remove_cv | << std::is_same::type>::value // std::remove_const | << std::is_same::type>::value // std::remove_volatile | << std::is_same::type>::value // std::add_cv | << std::is_same::type>::value // std::add_const | << std::is_same::type>::value // std::add_volatile | << std::is_same::type>::value // std::remove_reference | << std::is_same::type>::value // std::add_lvalue_reference | << std::is_same::type>::value // std::add_rvalue_reference | << std::is_same::type>::value // std::remove_pointer | << std::is_same::type>::value // std::add_pointer | << std::is_same::type>::value // std::make_signed | << std::is_same::type>::value // std::make_unsigned | << std::is_same::type>::value // std::remove_extent | << std::is_same::type>::value // std::remove_all_extents | << std::is_same::type>::value // std::decay | << is_odd(13) // std::enable_if | << std::is_same::type>::value // std::conditional | << std::is_same::type>::value // std::common_type | << std::is_same::type>::value // std::underlying_type | << std::is_same::type>::value // std::result_of | << std::endl; | | // std::aligned_storage | typedef std::aligned_storage::type aligned_t; | | // std::aligned_union | typedef std::aligned_union::type union_t; | | ; | return 0; | } configure:10254: result: no configure:10301: checking for C++11 std::asinh support in configure:10318: mpicxx -c -std=gnu++11 -std=gnu++11 conftest.cpp >&5 configure:10318: $? = 0 configure:10321: result: yes configure:10344: checking for C++11 std::acosh support in configure:10361: mpicxx -c -std=gnu++11 -std=gnu++11 conftest.cpp >&5 configure:10361: $? = 0 configure:10364: result: yes configure:10387: checking for C++11 std::atanh support in configure:10404: mpicxx -c -std=gnu++11 -std=gnu++11 conftest.cpp >&5 configure:10404: $? = 0 configure:10407: result: yes configure:10431: checking for C++11 std::asinh(complex) support in configure:10449: mpicxx -c -std=gnu++11 -std=gnu++11 conftest.cpp >&5 configure:10449: $? = 0 configure:10452: result: yes configure:10475: checking for C++11 std::acosh(complex) support in configure:10493: mpicxx -c -std=gnu++11 -std=gnu++11 conftest.cpp >&5 configure:10493: $? = 0 configure:10496: result: yes configure:10519: checking for C++11 std::atanh(complex) support in configure:10537: mpicxx -c -std=gnu++11 -std=gnu++11 conftest.cpp >&5 configure:10537: $? = 0 configure:10540: result: yes configure:10625: checking for C++11 deleted functions support configure:10657: mpicxx -c -std=gnu++11 -std=gnu++11 conftest.cpp >&5 configure:10657: $? = 0 configure:10660: result: yes configure:10704: checking for C++11 'final' keyword support configure:10742: mpicxx -c -std=gnu++11 -std=gnu++11 conftest.cpp >&5 configure:10742: $? = 0 configure:10777: mpicxx -c -std=gnu++11 -std=gnu++11 conftest.cpp >&5 conftest.cpp(40): error: nonvirtual function cannot be declared with "final" modifier void bar() final; ^ compilation aborted for conftest.cpp (code 2) configure:10777: $? = 2 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "libmesh" | #define PACKAGE_TARNAME "libmesh" | #define PACKAGE_VERSION "1.2.1" | #define PACKAGE_STRING "libmesh 1.2.1" | #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net" | #define PACKAGE_URL "http://libmesh.github.io" | #define CONFIGURE_INFO "../libMesh/configure '--prefix=/home/asbhalla/softwares/libMesh-Git/linux-opt' '--with-methods=opt' 'PETSC_DIR=/home/asbhalla/softwares/PETSc-BitBucket/PETSc' 'PETSC_ARCH=linux-opt' 'CC=mpicc' 'CXX=mpicxx' 'FC=mpif90' 'F77=mpif90' '--with-boost=/home/asbhalla/softwares/boost/1.67.0' '--enable-exodus' '--enable-triangle' '--disable-glibcxx-debugging' '--disable-openmp' '--disable-perflog' '--disable-strict-lgpl' '--disable-pthreads' '--disable-cppthreads' 'LDFLAGS=-L/lib64'" | #define PACKAGE "libmesh" | #define VERSION "1.2.1" | #define HAVE_CXX11 1 | #define HAVE_CXX11_MOVE 1 | #define HAVE_CXX11_RANGEFOR 1 | #define HAVE_CXX11_DECLTYPE 1 | #define HAVE_CXX11_RVALUE_REFERENCES 1 | #define HAVE_CXX11_AUTO 1 | #define HAVE_CXX11_LAMBDA 1 | #define HAVE_CXX11_CONSTEXPR 1 | #define HAVE_CXX11_ALIAS_DECLARATIONS 1 | #define HAVE_CXX11_SHARED_PTR 1 | #define HAVE_CXX11_UNIQUE_PTR 1 | #define HAVE_CXX11_MAKE_UNIQUE_WORKAROUND 1 | #define HAVE_CXX11_OVERRIDE 1 | #define HAVE_CXX11_INITIALIZER_LIST 1 | #define HAVE_CXX11_VARIADIC_TEMPLATES 1 | #define HAVE_CXX11_THREAD 1 | #define HAVE_CXX11_CONDITION_VARIABLE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT_COMPLEX 1 | #define HAVE_CXX11_DELETED_FUNCTIONS 1 | /* end confdefs.h. */ | | struct A | { | // Error: non-virtual function cannot be final | void bar() final; | }; | | int | main () | { | | | ; | return 0; | } configure:10818: mpicxx -c -std=gnu++11 -std=gnu++11 conftest.cpp >&5 conftest.cpp(44): error: cannot override "final" function "A::foo" (declared at line 39) void foo(); ^ compilation aborted for conftest.cpp (code 2) configure:10818: $? = 2 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "libmesh" | #define PACKAGE_TARNAME "libmesh" | #define PACKAGE_VERSION "1.2.1" | #define PACKAGE_STRING "libmesh 1.2.1" | #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net" | #define PACKAGE_URL "http://libmesh.github.io" | #define CONFIGURE_INFO "../libMesh/configure '--prefix=/home/asbhalla/softwares/libMesh-Git/linux-opt' '--with-methods=opt' 'PETSC_DIR=/home/asbhalla/softwares/PETSc-BitBucket/PETSc' 'PETSC_ARCH=linux-opt' 'CC=mpicc' 'CXX=mpicxx' 'FC=mpif90' 'F77=mpif90' '--with-boost=/home/asbhalla/softwares/boost/1.67.0' '--enable-exodus' '--enable-triangle' '--disable-glibcxx-debugging' '--disable-openmp' '--disable-perflog' '--disable-strict-lgpl' '--disable-pthreads' '--disable-cppthreads' 'LDFLAGS=-L/lib64'" | #define PACKAGE "libmesh" | #define VERSION "1.2.1" | #define HAVE_CXX11 1 | #define HAVE_CXX11_MOVE 1 | #define HAVE_CXX11_RANGEFOR 1 | #define HAVE_CXX11_DECLTYPE 1 | #define HAVE_CXX11_RVALUE_REFERENCES 1 | #define HAVE_CXX11_AUTO 1 | #define HAVE_CXX11_LAMBDA 1 | #define HAVE_CXX11_CONSTEXPR 1 | #define HAVE_CXX11_ALIAS_DECLARATIONS 1 | #define HAVE_CXX11_SHARED_PTR 1 | #define HAVE_CXX11_UNIQUE_PTR 1 | #define HAVE_CXX11_MAKE_UNIQUE_WORKAROUND 1 | #define HAVE_CXX11_OVERRIDE 1 | #define HAVE_CXX11_INITIALIZER_LIST 1 | #define HAVE_CXX11_VARIADIC_TEMPLATES 1 | #define HAVE_CXX11_THREAD 1 | #define HAVE_CXX11_CONDITION_VARIABLE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT_COMPLEX 1 | #define HAVE_CXX11_DELETED_FUNCTIONS 1 | /* end confdefs.h. */ | | struct A | { | virtual void foo() final; | }; | struct B : A | { | // Error: foo cannot be overridden as it's final in A | void foo(); | }; | | int | main () | { | | | ; | return 0; | } configure:10863: mpicxx -c -std=gnu++11 -std=gnu++11 conftest.cpp >&5 conftest.cpp(47): error: a "final" class type cannot be used as a base class struct C : B ^ compilation aborted for conftest.cpp (code 2) configure:10863: $? = 2 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "libmesh" | #define PACKAGE_TARNAME "libmesh" | #define PACKAGE_VERSION "1.2.1" | #define PACKAGE_STRING "libmesh 1.2.1" | #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net" | #define PACKAGE_URL "http://libmesh.github.io" | #define CONFIGURE_INFO "../libMesh/configure '--prefix=/home/asbhalla/softwares/libMesh-Git/linux-opt' '--with-methods=opt' 'PETSC_DIR=/home/asbhalla/softwares/PETSc-BitBucket/PETSc' 'PETSC_ARCH=linux-opt' 'CC=mpicc' 'CXX=mpicxx' 'FC=mpif90' 'F77=mpif90' '--with-boost=/home/asbhalla/softwares/boost/1.67.0' '--enable-exodus' '--enable-triangle' '--disable-glibcxx-debugging' '--disable-openmp' '--disable-perflog' '--disable-strict-lgpl' '--disable-pthreads' '--disable-cppthreads' 'LDFLAGS=-L/lib64'" | #define PACKAGE "libmesh" | #define VERSION "1.2.1" | #define HAVE_CXX11 1 | #define HAVE_CXX11_MOVE 1 | #define HAVE_CXX11_RANGEFOR 1 | #define HAVE_CXX11_DECLTYPE 1 | #define HAVE_CXX11_RVALUE_REFERENCES 1 | #define HAVE_CXX11_AUTO 1 | #define HAVE_CXX11_LAMBDA 1 | #define HAVE_CXX11_CONSTEXPR 1 | #define HAVE_CXX11_ALIAS_DECLARATIONS 1 | #define HAVE_CXX11_SHARED_PTR 1 | #define HAVE_CXX11_UNIQUE_PTR 1 | #define HAVE_CXX11_MAKE_UNIQUE_WORKAROUND 1 | #define HAVE_CXX11_OVERRIDE 1 | #define HAVE_CXX11_INITIALIZER_LIST 1 | #define HAVE_CXX11_VARIADIC_TEMPLATES 1 | #define HAVE_CXX11_THREAD 1 | #define HAVE_CXX11_CONDITION_VARIABLE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT_COMPLEX 1 | #define HAVE_CXX11_DELETED_FUNCTIONS 1 | /* end confdefs.h. */ | | struct A | { | }; | | // struct B is final | struct B final : A | { | }; | | // Error: B is final | struct C : B | { | }; | | int | main () | { | | | ; | return 0; | } configure:10882: result: yes configure:10919: checking for C++11 nullptr support configure:10953: mpicxx -c -std=gnu++11 -std=gnu++11 conftest.cpp >&5 configure:10953: $? = 0 configure:10956: result: yes configure:11080: checking for C++11 std::to_string() support configure:11119: mpicxx -c -std=gnu++11 -std=gnu++11 conftest.cpp >&5 configure:11119: $? = 0 configure:11122: result: yes configure:11165: checking for C++11 noexcept support configure:11205: mpicxx -c -std=gnu++11 -std=gnu++11 conftest.cpp >&5 configure:11205: $? = 0 configure:11208: result: yes configure:11299: checking how to print strings configure:11326: result: printf configure:11347: checking for a sed that does not truncate output configure:11411: result: /usr/bin/sed configure:11429: checking for grep that handles long lines and -e configure:11487: result: /usr/bin/grep configure:11492: checking for egrep configure:11554: result: /usr/bin/grep -E configure:11559: checking for fgrep configure:11621: result: /usr/bin/grep -F configure:11656: checking for ld used by mpicc configure:11723: result: /usr/bin/ld configure:11730: checking if the linker (/usr/bin/ld) is GNU ld configure:11745: result: yes configure:11757: checking for BSD- or MS-compatible name lister (nm) configure:11811: result: /usr/bin/nm -B configure:11941: checking the name lister (/usr/bin/nm -B) interface configure:11948: mpicxx -c -std=gnu++11 conftest.cpp >&5 configure:11951: /usr/bin/nm -B "conftest.o" configure:11954: output 0000000000000000 B some_variable configure:11961: result: BSD nm configure:11964: checking whether ln -s works configure:11968: result: yes configure:11976: checking the maximum length of command line arguments configure:12107: result: 1572864 configure:12155: checking how to convert x86_64-unknown-linux-gnu file names to x86_64-unknown-linux-gnu format configure:12195: result: func_convert_file_noop configure:12202: checking how to convert x86_64-unknown-linux-gnu file names to toolchain format configure:12222: result: func_convert_file_noop configure:12229: checking for /usr/bin/ld option to reload object files configure:12236: result: -r configure:12310: checking for objdump configure:12326: found /usr/bin/objdump configure:12337: result: objdump configure:12369: checking how to recognize dependent libraries configure:12569: result: pass_all configure:12654: checking for dlltool configure:12684: result: no configure:12714: checking how to associate runtime and link libraries configure:12741: result: printf %s\n configure:12801: checking for ar configure:12817: found /usr/bin/ar configure:12828: result: ar configure:12865: checking for archiver @FILE support configure:12882: mpicxx -c -std=gnu++11 conftest.cpp >&5 configure:12882: $? = 0 configure:12885: ar cru libconftest.a @conftest.lst >&5 configure:12888: $? = 0 configure:12893: ar cru libconftest.a @conftest.lst >&5 ar: conftest.o: No such file or directory configure:12896: $? = 1 configure:12908: result: @ configure:12966: checking for strip configure:12982: found /usr/bin/strip configure:12993: result: strip configure:13065: checking for ranlib configure:13081: found /usr/bin/ranlib configure:13092: result: ranlib configure:13194: checking command to parse /usr/bin/nm -B output from mpicc object configure:13347: mpicxx -c -std=gnu++11 conftest.cpp >&5 configure:13350: $? = 0 configure:13354: /usr/bin/nm -B conftest.o \| sed -n -e 's/^.*[ ]\([ABCDGIRSTW][ABCDGIRSTW]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p' | sed '/ __gnu_lto/d' \> conftest.nm configure:13357: $? = 0 configure:13423: mpicxx -o conftest -std=gnu++11 -L/lib64 conftest.cpp conftstm.o >&5 configure:13426: $? = 0 configure:13464: result: ok configure:13511: checking for sysroot configure:13541: result: no configure:13548: checking for a working dd configure:13586: result: /usr/bin/dd configure:13590: checking how to truncate binary pipes configure:13605: result: /usr/bin/dd bs=4096 count=1 configure:13741: mpicxx -c -std=gnu++11 conftest.cpp >&5 configure:13744: $? = 0 configure:13934: checking for mt configure:13964: result: no configure:13984: checking if : is a manifest tool configure:13990: : '-?' configure:13998: result: no configure:14675: checking how to run the C preprocessor configure:14706: mpicc -E conftest.c configure:14706: $? = 0 configure:14720: mpicc -E conftest.c conftest.c(40): error #2379: cannot open source file "ac_nonexistent.h" #include ^ configure:14720: $? = 2 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "libmesh" | #define PACKAGE_TARNAME "libmesh" | #define PACKAGE_VERSION "1.2.1" | #define PACKAGE_STRING "libmesh 1.2.1" | #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net" | #define PACKAGE_URL "http://libmesh.github.io" | #define CONFIGURE_INFO "../libMesh/configure '--prefix=/home/asbhalla/softwares/libMesh-Git/linux-opt' '--with-methods=opt' 'PETSC_DIR=/home/asbhalla/softwares/PETSc-BitBucket/PETSc' 'PETSC_ARCH=linux-opt' 'CC=mpicc' 'CXX=mpicxx' 'FC=mpif90' 'F77=mpif90' '--with-boost=/home/asbhalla/softwares/boost/1.67.0' '--enable-exodus' '--enable-triangle' '--disable-glibcxx-debugging' '--disable-openmp' '--disable-perflog' '--disable-strict-lgpl' '--disable-pthreads' '--disable-cppthreads' 'LDFLAGS=-L/lib64'" | #define PACKAGE "libmesh" | #define VERSION "1.2.1" | #define HAVE_CXX11 1 | #define HAVE_CXX11_MOVE 1 | #define HAVE_CXX11_RANGEFOR 1 | #define HAVE_CXX11_DECLTYPE 1 | #define HAVE_CXX11_RVALUE_REFERENCES 1 | #define HAVE_CXX11_AUTO 1 | #define HAVE_CXX11_LAMBDA 1 | #define HAVE_CXX11_CONSTEXPR 1 | #define HAVE_CXX11_ALIAS_DECLARATIONS 1 | #define HAVE_CXX11_SHARED_PTR 1 | #define HAVE_CXX11_UNIQUE_PTR 1 | #define HAVE_CXX11_MAKE_UNIQUE_WORKAROUND 1 | #define HAVE_CXX11_OVERRIDE 1 | #define HAVE_CXX11_INITIALIZER_LIST 1 | #define HAVE_CXX11_VARIADIC_TEMPLATES 1 | #define HAVE_CXX11_THREAD 1 | #define HAVE_CXX11_CONDITION_VARIABLE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT_COMPLEX 1 | #define HAVE_CXX11_DELETED_FUNCTIONS 1 | #define HAVE_CXX11_FINAL 1 | #define HAVE_CXX11_NULLPTR 1 | #define HAVE_CXX11_TO_STRING 1 | #define HAVE_CXX11_NOEXCEPT 1 | /* end confdefs.h. */ | #include configure:14745: result: mpicc -E configure:14765: mpicc -E conftest.c configure:14765: $? = 0 configure:14779: mpicc -E conftest.c conftest.c(40): error #2379: cannot open source file "ac_nonexistent.h" #include ^ configure:14779: $? = 2 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "libmesh" | #define PACKAGE_TARNAME "libmesh" | #define PACKAGE_VERSION "1.2.1" | #define PACKAGE_STRING "libmesh 1.2.1" | #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net" | #define PACKAGE_URL "http://libmesh.github.io" | #define CONFIGURE_INFO "../libMesh/configure '--prefix=/home/asbhalla/softwares/libMesh-Git/linux-opt' '--with-methods=opt' 'PETSC_DIR=/home/asbhalla/softwares/PETSc-BitBucket/PETSc' 'PETSC_ARCH=linux-opt' 'CC=mpicc' 'CXX=mpicxx' 'FC=mpif90' 'F77=mpif90' '--with-boost=/home/asbhalla/softwares/boost/1.67.0' '--enable-exodus' '--enable-triangle' '--disable-glibcxx-debugging' '--disable-openmp' '--disable-perflog' '--disable-strict-lgpl' '--disable-pthreads' '--disable-cppthreads' 'LDFLAGS=-L/lib64'" | #define PACKAGE "libmesh" | #define VERSION "1.2.1" | #define HAVE_CXX11 1 | #define HAVE_CXX11_MOVE 1 | #define HAVE_CXX11_RANGEFOR 1 | #define HAVE_CXX11_DECLTYPE 1 | #define HAVE_CXX11_RVALUE_REFERENCES 1 | #define HAVE_CXX11_AUTO 1 | #define HAVE_CXX11_LAMBDA 1 | #define HAVE_CXX11_CONSTEXPR 1 | #define HAVE_CXX11_ALIAS_DECLARATIONS 1 | #define HAVE_CXX11_SHARED_PTR 1 | #define HAVE_CXX11_UNIQUE_PTR 1 | #define HAVE_CXX11_MAKE_UNIQUE_WORKAROUND 1 | #define HAVE_CXX11_OVERRIDE 1 | #define HAVE_CXX11_INITIALIZER_LIST 1 | #define HAVE_CXX11_VARIADIC_TEMPLATES 1 | #define HAVE_CXX11_THREAD 1 | #define HAVE_CXX11_CONDITION_VARIABLE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT_COMPLEX 1 | #define HAVE_CXX11_DELETED_FUNCTIONS 1 | #define HAVE_CXX11_FINAL 1 | #define HAVE_CXX11_NULLPTR 1 | #define HAVE_CXX11_TO_STRING 1 | #define HAVE_CXX11_NOEXCEPT 1 | /* end confdefs.h. */ | #include configure:14808: checking for ANSI C header files configure:14828: mpicc -c conftest.c >&5 configure:14828: $? = 0 configure:14901: mpicc -o conftest -L/lib64 conftest.c >&5 configure:14901: $? = 0 configure:14901: ./conftest configure:14901: $? = 0 configure:14912: result: yes configure:14925: checking for sys/types.h configure:14925: mpicc -c conftest.c >&5 configure:14925: $? = 0 configure:14925: result: yes configure:14925: checking for sys/stat.h configure:14925: mpicc -c conftest.c >&5 configure:14925: $? = 0 configure:14925: result: yes configure:14925: checking for stdlib.h configure:14925: mpicc -c conftest.c >&5 configure:14925: $? = 0 configure:14925: result: yes configure:14925: checking for string.h configure:14925: mpicc -c conftest.c >&5 configure:14925: $? = 0 configure:14925: result: yes configure:14925: checking for memory.h configure:14925: mpicc -c conftest.c >&5 configure:14925: $? = 0 configure:14925: result: yes configure:14925: checking for strings.h configure:14925: mpicc -c conftest.c >&5 configure:14925: $? = 0 configure:14925: result: yes configure:14925: checking for inttypes.h configure:14925: mpicc -c conftest.c >&5 configure:14925: $? = 0 configure:14925: result: yes configure:14925: checking for stdint.h configure:14925: mpicc -c conftest.c >&5 configure:14925: $? = 0 configure:14925: result: yes configure:14925: checking for unistd.h configure:14925: mpicc -c conftest.c >&5 configure:14925: $? = 0 configure:14925: result: yes configure:14939: checking for dlfcn.h configure:14939: mpicc -c conftest.c >&5 configure:14939: $? = 0 configure:14939: result: yes configure:15205: checking for objdir configure:15220: result: .libs configure:15484: checking if mpicc supports -fno-rtti -fno-exceptions configure:15502: mpicc -c -fno-rtti -fno-exceptions conftest.c >&5 configure:15506: $? = 0 configure:15519: result: yes configure:15877: checking for mpicc option to produce PIC configure:15884: result: -fPIC -DPIC configure:15892: checking if mpicc PIC flag -fPIC -DPIC works configure:15910: mpicc -c -fPIC -DPIC -DPIC conftest.c >&5 configure:15914: $? = 0 configure:15927: result: yes configure:15956: checking if mpicc static flag -static works configure:15984: result: no configure:15999: checking if mpicc supports -c -o file.o configure:16020: mpicc -c -o out/conftest2.o conftest.c >&5 configure:16024: $? = 0 configure:16046: result: yes configure:16054: checking if mpicc supports -c -o file.o configure:16101: result: yes configure:16134: checking whether the mpicc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries configure:17393: result: yes configure:17430: checking whether -lc should be explicitly linked in configure:17438: mpicc -c conftest.c >&5 configure:17441: $? = 0 configure:17456: mpicc -shared -fPIC -DPIC conftest.o -v -Wl,-soname -Wl,conftest -o conftest 2\>\&1 \| /usr/bin/grep -lc \>/dev/null 2\>\&1 configure:17459: $? = 0 configure:17473: result: no configure:17633: checking dynamic linker characteristics configure:18214: mpicc -o conftest -L/lib64 -Wl,-rpath -Wl,/foo conftest.c >&5 configure:18214: $? = 0 configure:18451: result: GNU/Linux ld.so configure:18573: checking how to hardcode library paths into programs configure:18598: result: immediate configure:19146: checking whether stripping libraries is possible configure:19151: result: yes configure:19186: checking if libtool supports shared libraries configure:19188: result: yes configure:19191: checking whether to build shared libraries configure:19216: result: yes configure:19219: checking whether to build static libraries configure:19223: result: no configure:19246: checking how to run the C++ preprocessor configure:19273: mpicxx -E conftest.cpp configure:19273: $? = 0 configure:19287: mpicxx -E conftest.cpp conftest.cpp(52): error #2379: cannot open source file "ac_nonexistent.h" #include ^ configure:19287: $? = 2 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "libmesh" | #define PACKAGE_TARNAME "libmesh" | #define PACKAGE_VERSION "1.2.1" | #define PACKAGE_STRING "libmesh 1.2.1" | #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net" | #define PACKAGE_URL "http://libmesh.github.io" | #define CONFIGURE_INFO "../libMesh/configure '--prefix=/home/asbhalla/softwares/libMesh-Git/linux-opt' '--with-methods=opt' 'PETSC_DIR=/home/asbhalla/softwares/PETSc-BitBucket/PETSc' 'PETSC_ARCH=linux-opt' 'CC=mpicc' 'CXX=mpicxx' 'FC=mpif90' 'F77=mpif90' '--with-boost=/home/asbhalla/softwares/boost/1.67.0' '--enable-exodus' '--enable-triangle' '--disable-glibcxx-debugging' '--disable-openmp' '--disable-perflog' '--disable-strict-lgpl' '--disable-pthreads' '--disable-cppthreads' 'LDFLAGS=-L/lib64'" | #define PACKAGE "libmesh" | #define VERSION "1.2.1" | #define HAVE_CXX11 1 | #define HAVE_CXX11_MOVE 1 | #define HAVE_CXX11_RANGEFOR 1 | #define HAVE_CXX11_DECLTYPE 1 | #define HAVE_CXX11_RVALUE_REFERENCES 1 | #define HAVE_CXX11_AUTO 1 | #define HAVE_CXX11_LAMBDA 1 | #define HAVE_CXX11_CONSTEXPR 1 | #define HAVE_CXX11_ALIAS_DECLARATIONS 1 | #define HAVE_CXX11_SHARED_PTR 1 | #define HAVE_CXX11_UNIQUE_PTR 1 | #define HAVE_CXX11_MAKE_UNIQUE_WORKAROUND 1 | #define HAVE_CXX11_OVERRIDE 1 | #define HAVE_CXX11_INITIALIZER_LIST 1 | #define HAVE_CXX11_VARIADIC_TEMPLATES 1 | #define HAVE_CXX11_THREAD 1 | #define HAVE_CXX11_CONDITION_VARIABLE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT_COMPLEX 1 | #define HAVE_CXX11_DELETED_FUNCTIONS 1 | #define HAVE_CXX11_FINAL 1 | #define HAVE_CXX11_NULLPTR 1 | #define HAVE_CXX11_TO_STRING 1 | #define HAVE_CXX11_NOEXCEPT 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | /* end confdefs.h. */ | #include configure:19312: result: mpicxx -E configure:19332: mpicxx -E conftest.cpp configure:19332: $? = 0 configure:19346: mpicxx -E conftest.cpp conftest.cpp(52): error #2379: cannot open source file "ac_nonexistent.h" #include ^ configure:19346: $? = 2 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "libmesh" | #define PACKAGE_TARNAME "libmesh" | #define PACKAGE_VERSION "1.2.1" | #define PACKAGE_STRING "libmesh 1.2.1" | #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net" | #define PACKAGE_URL "http://libmesh.github.io" | #define CONFIGURE_INFO "../libMesh/configure '--prefix=/home/asbhalla/softwares/libMesh-Git/linux-opt' '--with-methods=opt' 'PETSC_DIR=/home/asbhalla/softwares/PETSc-BitBucket/PETSc' 'PETSC_ARCH=linux-opt' 'CC=mpicc' 'CXX=mpicxx' 'FC=mpif90' 'F77=mpif90' '--with-boost=/home/asbhalla/softwares/boost/1.67.0' '--enable-exodus' '--enable-triangle' '--disable-glibcxx-debugging' '--disable-openmp' '--disable-perflog' '--disable-strict-lgpl' '--disable-pthreads' '--disable-cppthreads' 'LDFLAGS=-L/lib64'" | #define PACKAGE "libmesh" | #define VERSION "1.2.1" | #define HAVE_CXX11 1 | #define HAVE_CXX11_MOVE 1 | #define HAVE_CXX11_RANGEFOR 1 | #define HAVE_CXX11_DECLTYPE 1 | #define HAVE_CXX11_RVALUE_REFERENCES 1 | #define HAVE_CXX11_AUTO 1 | #define HAVE_CXX11_LAMBDA 1 | #define HAVE_CXX11_CONSTEXPR 1 | #define HAVE_CXX11_ALIAS_DECLARATIONS 1 | #define HAVE_CXX11_SHARED_PTR 1 | #define HAVE_CXX11_UNIQUE_PTR 1 | #define HAVE_CXX11_MAKE_UNIQUE_WORKAROUND 1 | #define HAVE_CXX11_OVERRIDE 1 | #define HAVE_CXX11_INITIALIZER_LIST 1 | #define HAVE_CXX11_VARIADIC_TEMPLATES 1 | #define HAVE_CXX11_THREAD 1 | #define HAVE_CXX11_CONDITION_VARIABLE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT_COMPLEX 1 | #define HAVE_CXX11_DELETED_FUNCTIONS 1 | #define HAVE_CXX11_FINAL 1 | #define HAVE_CXX11_NULLPTR 1 | #define HAVE_CXX11_TO_STRING 1 | #define HAVE_CXX11_NOEXCEPT 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | /* end confdefs.h. */ | #include configure:19508: checking for ld used by mpicxx configure:19575: result: /usr/bin/ld -m elf_x86_64 configure:19582: checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld configure:19597: result: yes configure:19652: checking whether the mpicxx linker (/usr/bin/ld -m elf_x86_64) supports shared libraries configure:20725: result: yes configure:20761: mpicxx -c -std=gnu++11 conftest.cpp >&5 configure:20764: $? = 0 configure:21245: checking for mpicxx option to produce PIC configure:21252: result: -fPIC -DPIC configure:21260: checking if mpicxx PIC flag -fPIC -DPIC works configure:21278: mpicxx -c -std=gnu++11 -fPIC -DPIC -DPIC conftest.cpp >&5 configure:21282: $? = 0 configure:21295: result: yes configure:21318: checking if mpicxx static flag -static works configure:21346: result: no configure:21358: checking if mpicxx supports -c -o file.o configure:21379: mpicxx -c -std=gnu++11 -o out/conftest2.o conftest.cpp >&5 configure:21383: $? = 0 configure:21405: result: yes configure:21410: checking if mpicxx supports -c -o file.o configure:21457: result: yes configure:21487: checking whether the mpicxx linker (/usr/bin/ld -m elf_x86_64) supports shared libraries configure:21527: result: yes configure:21668: checking dynamic linker characteristics configure:22413: result: GNU/Linux ld.so configure:22478: checking how to hardcode library paths into programs configure:22503: result: immediate configure:22644: checking if libtool supports shared libraries configure:22646: result: yes configure:22649: checking whether to build shared libraries configure:22673: result: yes configure:22676: checking whether to build static libraries configure:22680: result: no configure:23032: checking for mpif90 option to produce PIC configure:23039: result: -fPIC configure:23047: checking if mpif90 PIC flag -fPIC works configure:23065: mpif90 -c -g -fPIC conftest.f >&5 configure:23069: $? = 0 configure:23082: result: yes configure:23105: checking if mpif90 static flag -static works configure:23133: result: no configure:23145: checking if mpif90 supports -c -o file.o configure:23166: mpif90 -c -g -o out/conftest2.o conftest.f >&5 configure:23170: $? = 0 configure:23192: result: yes configure:23197: checking if mpif90 supports -c -o file.o configure:23244: result: yes configure:23274: checking whether the mpif90 linker (/usr/bin/ld -m elf_x86_64) supports shared libraries configure:24483: result: yes configure:24624: checking dynamic linker characteristics configure:25363: result: GNU/Linux ld.so configure:25428: checking how to hardcode library paths into programs configure:25453: result: immediate configure:25590: checking if libtool supports shared libraries configure:25592: result: yes configure:25595: checking whether to build shared libraries configure:25619: result: yes configure:25622: checking whether to build static libraries configure:25626: result: no configure:25660: mpif90 -c -g conftest.f >&5 configure:25663: $? = 0 configure:26123: checking for mpif90 option to produce PIC configure:26130: result: -fPIC configure:26138: checking if mpif90 PIC flag -fPIC works configure:26156: mpif90 -c -g -fPIC conftest.f >&5 configure:26160: $? = 0 configure:26173: result: yes configure:26196: checking if mpif90 static flag -static works configure:26224: result: no configure:26236: checking if mpif90 supports -c -o file.o configure:26257: mpif90 -c -g -o out/conftest2.o conftest.f >&5 configure:26261: $? = 0 configure:26283: result: yes configure:26288: checking if mpif90 supports -c -o file.o configure:26335: result: yes configure:26365: checking whether the mpif90 linker (/usr/bin/ld -m elf_x86_64) supports shared libraries configure:27574: result: yes configure:27715: checking dynamic linker characteristics configure:28454: result: GNU/Linux ld.so configure:28519: checking how to hardcode library paths into programs configure:28544: result: immediate configure:28629: checking Major version configure:28631: result: 1 configure:28633: checking Minor version configure:28635: result: 2 configure:28637: checking Point version configure:28639: result: 1 configure:28684: checking whether ln -s works configure:28688: result: yes configure:28713: checking for a sed that does not truncate output configure:28777: result: /usr/bin/sed configure:28797: checking for pkg-config configure:28815: found /usr/bin/pkg-config configure:28828: result: /usr/bin/pkg-config configure:28842: checking whether the compiler implements namespaces configure:28865: mpicxx -c -std=gnu++11 conftest.cpp >&5 configure:28865: $? = 0 configure:28879: result: yes configure:28888: result: --------------------------------------------- configure:28890: result: ------- Configuring compiler features ------- configure:28892: result: --------------------------------------------- configure:28979: result: <<< Default floating point is double precision (double) >>> configure:29017: checking for C/C++ restrict keyword configure:29042: mpicxx -c -Kc++eh -Krtti -O1 -w1 -inline_debug_info -g -wd504 conftest.cpp >&5 icpc: command line remark #10148: option '-inline_debug_info' not supported configure:29042: $? = 0 configure:29050: result: __restrict configure:29087: result: <<< Configuring library with getpwuid >>> configure:29109: result: <<< Configuring library with exception throwing support >>> configure:29133: result: <<< Configuring library with compile timestamps >>> configure:29147: checking size of short int configure:29152: mpicxx -o conftest -Kc++eh -Krtti -O1 -w1 -inline_debug_info -g -wd504 -L/lib64 conftest.cpp >&5 icpc: command line remark #10148: option '-inline_debug_info' not supported configure:29152: $? = 0 configure:29152: ./conftest configure:29152: $? = 0 configure:29166: result: 2 configure:29180: checking size of int configure:29185: mpicxx -o conftest -Kc++eh -Krtti -O1 -w1 -inline_debug_info -g -wd504 -L/lib64 conftest.cpp >&5 icpc: command line remark #10148: option '-inline_debug_info' not supported configure:29185: $? = 0 configure:29185: ./conftest configure:29185: $? = 0 configure:29199: result: 4 configure:29213: checking size of unsigned int configure:29218: mpicxx -o conftest -Kc++eh -Krtti -O1 -w1 -inline_debug_info -g -wd504 -L/lib64 conftest.cpp >&5 icpc: command line remark #10148: option '-inline_debug_info' not supported configure:29218: $? = 0 configure:29218: ./conftest configure:29218: $? = 0 configure:29232: result: 4 configure:29246: checking size of size_t configure:29251: mpicxx -o conftest -Kc++eh -Krtti -O1 -w1 -inline_debug_info -g -wd504 -L/lib64 conftest.cpp >&5 icpc: command line remark #10148: option '-inline_debug_info' not supported configure:29251: $? = 0 configure:29251: ./conftest configure:29251: $? = 0 configure:29265: result: 8 configure:29279: checking size of long int configure:29284: mpicxx -o conftest -Kc++eh -Krtti -O1 -w1 -inline_debug_info -g -wd504 -L/lib64 conftest.cpp >&5 icpc: command line remark #10148: option '-inline_debug_info' not supported configure:29284: $? = 0 configure:29284: ./conftest configure:29284: $? = 0 configure:29298: result: 8 configure:29312: checking size of float configure:29317: mpicxx -o conftest -Kc++eh -Krtti -O1 -w1 -inline_debug_info -g -wd504 -L/lib64 conftest.cpp >&5 icpc: command line remark #10148: option '-inline_debug_info' not supported configure:29317: $? = 0 configure:29317: ./conftest configure:29317: $? = 0 configure:29331: result: 4 configure:29345: checking size of double configure:29350: mpicxx -o conftest -Kc++eh -Krtti -O1 -w1 -inline_debug_info -g -wd504 -L/lib64 conftest.cpp >&5 icpc: command line remark #10148: option '-inline_debug_info' not supported configure:29350: $? = 0 configure:29350: ./conftest configure:29350: $? = 0 configure:29364: result: 8 configure:29378: checking size of void * configure:29383: mpicxx -o conftest -Kc++eh -Krtti -O1 -w1 -inline_debug_info -g -wd504 -L/lib64 conftest.cpp >&5 icpc: command line remark #10148: option '-inline_debug_info' not supported configure:29383: $? = 0 configure:29383: ./conftest configure:29383: $? = 0 configure:29397: result: 8 configure:29416: checking size of function_pointer configure:29421: mpicxx -o conftest -Kc++eh -Krtti -O1 -w1 -inline_debug_info -g -wd504 -L/lib64 conftest.cpp >&5 icpc: command line remark #10148: option '-inline_debug_info' not supported configure:29421: $? = 0 configure:29421: ./conftest configure:29421: $? = 0 configure:29436: result: 8 configure:29451: checking whether the compiler supports Run-Time Type Identification configure:29486: mpicxx -c -Kc++eh -Krtti -O1 -w1 -inline_debug_info -g -wd504 conftest.cpp >&5 icpc: command line remark #10148: option '-inline_debug_info' not supported configure:29486: $? = 0 configure:29500: result: yes configure:29516: checking getopt.h usability configure:29516: mpicxx -c -Kc++eh -Krtti -O1 -w1 -inline_debug_info -g -wd504 conftest.cpp >&5 icpc: command line remark #10148: option '-inline_debug_info' not supported configure:29516: $? = 0 configure:29516: result: yes configure:29516: checking getopt.h presence configure:29516: mpicxx -E conftest.cpp configure:29516: $? = 0 configure:29516: result: yes configure:29516: checking for getopt.h configure:29516: result: yes configure:29528: checking csignal usability configure:29528: mpicxx -c -Kc++eh -Krtti -O1 -w1 -inline_debug_info -g -wd504 conftest.cpp >&5 icpc: command line remark #10148: option '-inline_debug_info' not supported configure:29528: $? = 0 configure:29528: result: yes configure:29528: checking csignal presence configure:29528: mpicxx -E conftest.cpp configure:29528: $? = 0 configure:29528: result: yes configure:29528: checking for csignal configure:29528: result: yes configure:29540: checking sys/resource.h usability configure:29540: mpicxx -c -Kc++eh -Krtti -O1 -w1 -inline_debug_info -g -wd504 conftest.cpp >&5 icpc: command line remark #10148: option '-inline_debug_info' not supported configure:29540: $? = 0 configure:29540: result: yes configure:29540: checking sys/resource.h presence configure:29540: mpicxx -E conftest.cpp configure:29540: $? = 0 configure:29540: result: yes configure:29540: checking for sys/resource.h configure:29540: result: yes configure:29550: checking whether the compiler has locale configure:29582: mpicxx -c -Kc++eh -Krtti -O1 -w1 -inline_debug_info -g -wd504 conftest.cpp >&5 icpc: command line remark #10148: option '-inline_debug_info' not supported configure:29582: $? = 0 configure:29596: result: yes configure:29604: checking whether the compiler has stringstream configure:29637: mpicxx -c -Kc++eh -Krtti -O1 -w1 -inline_debug_info -g -wd504 conftest.cpp >&5 icpc: command line remark #10148: option '-inline_debug_info' not supported configure:29637: $? = 0 configure:29651: result: yes configure:29725: checking fenv.h usability configure:29725: mpicxx -c -Kc++eh -Krtti -O1 -w1 -inline_debug_info -g -wd504 conftest.cpp >&5 icpc: command line remark #10148: option '-inline_debug_info' not supported configure:29725: $? = 0 configure:29725: result: yes configure:29725: checking fenv.h presence configure:29725: mpicxx -E conftest.cpp configure:29725: $? = 0 configure:29725: result: yes configure:29725: checking for fenv.h configure:29725: result: yes configure:29737: checking xmmintrin.h usability configure:29737: mpicxx -c -Kc++eh -Krtti -O1 -w1 -inline_debug_info -g -wd504 conftest.cpp >&5 icpc: command line remark #10148: option '-inline_debug_info' not supported configure:29737: $? = 0 configure:29737: result: yes configure:29737: checking xmmintrin.h presence configure:29737: mpicxx -E conftest.cpp configure:29737: $? = 0 configure:29737: result: yes configure:29737: checking for xmmintrin.h configure:29737: result: yes configure:29766: mpicxx -c -Kc++eh -Krtti -O1 -w1 -inline_debug_info -g -wd504 conftest.cpp >&5 icpc: command line remark #10148: option '-inline_debug_info' not supported configure:29766: $? = 0 configure:29790: mpicxx -c -Kc++eh -Krtti -O1 -w1 -inline_debug_info -g -wd504 conftest.cpp >&5 icpc: command line remark #10148: option '-inline_debug_info' not supported configure:29790: $? = 0 configure:29816: checking whether the compiler supports std::unordered_multimap configure:29844: mpicxx -c -Kc++eh -Krtti -O1 -w1 -inline_debug_info -g -wd504 conftest.cpp >&5 icpc: command line remark #10148: option '-inline_debug_info' not supported In file included from /usr/include/c++/4.8.5/unordered_map(35), from conftest.cpp(86): /usr/include/c++/4.8.5/bits/c++0x_warning.h(32): error: #error directive: This file requires compiler and library support for the ISO C++ 2011 standard. This support is currently experimental, and must be enabled with the -std=c++11 or -std=gnu++11 compiler options. #error This file requires compiler and library support for the \ ^ conftest.cpp(91): error: namespace "std" has no member "unordered_multimap" std::unordered_multimap m; ^ conftest.cpp(91): error: type name is not allowed std::unordered_multimap m; ^ conftest.cpp(91): error: type name is not allowed std::unordered_multimap m; ^ conftest.cpp(91): error: identifier "m" is undefined std::unordered_multimap m; ^ conftest.cpp(92): error: namespace "std" has no member "make_pair" m.insert(std::make_pair(1, 2)); ^ conftest.cpp(93): error: namespace "std" has no member "make_pair" m.insert(std::make_pair(1, 3)); ^ compilation aborted for conftest.cpp (code 2) configure:29844: $? = 2 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "libmesh" | #define PACKAGE_TARNAME "libmesh" | #define PACKAGE_VERSION "1.2.1" | #define PACKAGE_STRING "libmesh 1.2.1" | #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net" | #define PACKAGE_URL "http://libmesh.github.io" | #define CONFIGURE_INFO "../libMesh/configure '--prefix=/home/asbhalla/softwares/libMesh-Git/linux-opt' '--with-methods=opt' 'PETSC_DIR=/home/asbhalla/softwares/PETSc-BitBucket/PETSc' 'PETSC_ARCH=linux-opt' 'CC=mpicc' 'CXX=mpicxx' 'FC=mpif90' 'F77=mpif90' '--with-boost=/home/asbhalla/softwares/boost/1.67.0' '--enable-exodus' '--enable-triangle' '--disable-glibcxx-debugging' '--disable-openmp' '--disable-perflog' '--disable-strict-lgpl' '--disable-pthreads' '--disable-cppthreads' 'LDFLAGS=-L/lib64'" | #define PACKAGE "libmesh" | #define VERSION "1.2.1" | #define HAVE_CXX11 1 | #define HAVE_CXX11_MOVE 1 | #define HAVE_CXX11_RANGEFOR 1 | #define HAVE_CXX11_DECLTYPE 1 | #define HAVE_CXX11_RVALUE_REFERENCES 1 | #define HAVE_CXX11_AUTO 1 | #define HAVE_CXX11_LAMBDA 1 | #define HAVE_CXX11_CONSTEXPR 1 | #define HAVE_CXX11_ALIAS_DECLARATIONS 1 | #define HAVE_CXX11_SHARED_PTR 1 | #define HAVE_CXX11_UNIQUE_PTR 1 | #define HAVE_CXX11_MAKE_UNIQUE_WORKAROUND 1 | #define HAVE_CXX11_OVERRIDE 1 | #define HAVE_CXX11_INITIALIZER_LIST 1 | #define HAVE_CXX11_VARIADIC_TEMPLATES 1 | #define HAVE_CXX11_THREAD 1 | #define HAVE_CXX11_CONDITION_VARIABLE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT_COMPLEX 1 | #define HAVE_CXX11_DELETED_FUNCTIONS 1 | #define HAVE_CXX11_FINAL 1 | #define HAVE_CXX11_NULLPTR 1 | #define HAVE_CXX11_TO_STRING 1 | #define HAVE_CXX11_NOEXCEPT 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MAJOR_VERSION 1 | #define MINOR_VERSION 2 | #define MICRO_VERSION 1 | #define LIB_VERSION "1.2.1" | #define LIB_RELEASE "" | #define CXX "mpicxx" | #define IO_COMPATIBILITY_VERSION "0.7.4" | #define HAVE_NAMESPACES /**/ | #define DEFAULT_DOUBLE_PRECISION 1 | #define DEFAULT_SCALAR_TYPE double | #define restrict __restrict | #define HAVE_GETPWUID 1 | #define ENABLE_EXCEPTIONS 1 | #define ENABLE_TIMESTAMPS 1 | #define SIZEOF_SHORT_INT 2 | #define SIZEOF_INT 4 | #define SIZEOF_UNSIGNED_INT 4 | #define SIZEOF_SIZE_T 8 | #define SIZEOF_LONG_INT 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_VOID_P 8 | #define SIZEOF_FUNCTION_POINTER 8 | #define HAVE_RTTI /**/ | #define HAVE_GETOPT_H 1 | #define HAVE_CSIGNAL 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_LOCALE /**/ | #define HAVE_SSTREAM /**/ | #define HAVE_STRINGSTREAM /**/ | #define HAVE_FENV_H 1 | #define HAVE_XMMINTRIN_H 1 | #define HAVE_FEENABLEEXCEPT 1 | #define HAVE_FEDISABLEEXCEPT 1 | /* end confdefs.h. */ | #include | int | main () | { | | std::unordered_multimap m; | m.insert(std::make_pair(1, 2)); | m.insert(std::make_pair(1, 3)); | if (m.size() != 2) return 1; | | ; | return 0; | } configure:29858: result: no configure:29881: checking whether the compiler supports std::tr1::unordered_multimap configure:29909: mpicxx -c -Kc++eh -Krtti -O1 -w1 -inline_debug_info -g -wd504 conftest.cpp >&5 icpc: command line remark #10148: option '-inline_debug_info' not supported configure:29909: $? = 0 configure:29923: result: yes configure:30146: checking whether the compiler supports std::unordered_map configure:30172: mpicxx -c -Kc++eh -Krtti -O1 -w1 -inline_debug_info -g -wd504 conftest.cpp >&5 icpc: command line remark #10148: option '-inline_debug_info' not supported In file included from /usr/include/c++/4.8.5/unordered_map(35), from conftest.cpp(91): /usr/include/c++/4.8.5/bits/c++0x_warning.h(32): error: #error directive: This file requires compiler and library support for the ISO C++ 2011 standard. This support is currently experimental, and must be enabled with the -std=c++11 or -std=gnu++11 compiler options. #error This file requires compiler and library support for the \ ^ conftest.cpp(96): error: namespace "std" has no member "unordered_map" std::unordered_map m; ^ conftest.cpp(96): error: type name is not allowed std::unordered_map m; ^ conftest.cpp(96): error: type name is not allowed std::unordered_map m; ^ conftest.cpp(96): error: identifier "m" is undefined std::unordered_map m; ^ conftest.cpp(97): error: namespace "std" has no member "make_pair" m.insert(std::make_pair(1, 2)); ^ compilation aborted for conftest.cpp (code 2) configure:30172: $? = 2 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "libmesh" | #define PACKAGE_TARNAME "libmesh" | #define PACKAGE_VERSION "1.2.1" | #define PACKAGE_STRING "libmesh 1.2.1" | #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net" | #define PACKAGE_URL "http://libmesh.github.io" | #define CONFIGURE_INFO "../libMesh/configure '--prefix=/home/asbhalla/softwares/libMesh-Git/linux-opt' '--with-methods=opt' 'PETSC_DIR=/home/asbhalla/softwares/PETSc-BitBucket/PETSc' 'PETSC_ARCH=linux-opt' 'CC=mpicc' 'CXX=mpicxx' 'FC=mpif90' 'F77=mpif90' '--with-boost=/home/asbhalla/softwares/boost/1.67.0' '--enable-exodus' '--enable-triangle' '--disable-glibcxx-debugging' '--disable-openmp' '--disable-perflog' '--disable-strict-lgpl' '--disable-pthreads' '--disable-cppthreads' 'LDFLAGS=-L/lib64'" | #define PACKAGE "libmesh" | #define VERSION "1.2.1" | #define HAVE_CXX11 1 | #define HAVE_CXX11_MOVE 1 | #define HAVE_CXX11_RANGEFOR 1 | #define HAVE_CXX11_DECLTYPE 1 | #define HAVE_CXX11_RVALUE_REFERENCES 1 | #define HAVE_CXX11_AUTO 1 | #define HAVE_CXX11_LAMBDA 1 | #define HAVE_CXX11_CONSTEXPR 1 | #define HAVE_CXX11_ALIAS_DECLARATIONS 1 | #define HAVE_CXX11_SHARED_PTR 1 | #define HAVE_CXX11_UNIQUE_PTR 1 | #define HAVE_CXX11_MAKE_UNIQUE_WORKAROUND 1 | #define HAVE_CXX11_OVERRIDE 1 | #define HAVE_CXX11_INITIALIZER_LIST 1 | #define HAVE_CXX11_VARIADIC_TEMPLATES 1 | #define HAVE_CXX11_THREAD 1 | #define HAVE_CXX11_CONDITION_VARIABLE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT_COMPLEX 1 | #define HAVE_CXX11_DELETED_FUNCTIONS 1 | #define HAVE_CXX11_FINAL 1 | #define HAVE_CXX11_NULLPTR 1 | #define HAVE_CXX11_TO_STRING 1 | #define HAVE_CXX11_NOEXCEPT 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MAJOR_VERSION 1 | #define MINOR_VERSION 2 | #define MICRO_VERSION 1 | #define LIB_VERSION "1.2.1" | #define LIB_RELEASE "" | #define CXX "mpicxx" | #define IO_COMPATIBILITY_VERSION "0.7.4" | #define HAVE_NAMESPACES /**/ | #define DEFAULT_DOUBLE_PRECISION 1 | #define DEFAULT_SCALAR_TYPE double | #define restrict __restrict | #define HAVE_GETPWUID 1 | #define ENABLE_EXCEPTIONS 1 | #define ENABLE_TIMESTAMPS 1 | #define SIZEOF_SHORT_INT 2 | #define SIZEOF_INT 4 | #define SIZEOF_UNSIGNED_INT 4 | #define SIZEOF_SIZE_T 8 | #define SIZEOF_LONG_INT 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_VOID_P 8 | #define SIZEOF_FUNCTION_POINTER 8 | #define HAVE_RTTI /**/ | #define HAVE_GETOPT_H 1 | #define HAVE_CSIGNAL 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_LOCALE /**/ | #define HAVE_SSTREAM /**/ | #define HAVE_STRINGSTREAM /**/ | #define HAVE_FENV_H 1 | #define HAVE_XMMINTRIN_H 1 | #define HAVE_FEENABLEEXCEPT 1 | #define HAVE_FEDISABLEEXCEPT 1 | #define HAVE_TR1_UNORDERED_MULTIMAP 1 | #define BEST_UNORDERED_MULTIMAP std::tr1::unordered_multimap | #define INCLUDE_UNORDERED_MULTIMAP | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | /* end confdefs.h. */ | #include | int | main () | { | | std::unordered_map m; | m.insert(std::make_pair(1, 2)); | | ; | return 0; | } configure:30186: result: no configure:30209: checking whether the compiler supports std::tr1::unordered_map configure:30235: mpicxx -c -Kc++eh -Krtti -O1 -w1 -inline_debug_info -g -wd504 conftest.cpp >&5 icpc: command line remark #10148: option '-inline_debug_info' not supported configure:30235: $? = 0 configure:30249: result: yes configure:30470: checking whether the compiler supports std::unordered_multiset configure:30498: mpicxx -c -Kc++eh -Krtti -O1 -w1 -inline_debug_info -g -wd504 conftest.cpp >&5 icpc: command line remark #10148: option '-inline_debug_info' not supported In file included from /usr/include/c++/4.8.5/unordered_set(35), from conftest.cpp(96): /usr/include/c++/4.8.5/bits/c++0x_warning.h(32): error: #error directive: This file requires compiler and library support for the ISO C++ 2011 standard. This support is currently experimental, and must be enabled with the -std=c++11 or -std=gnu++11 compiler options. #error This file requires compiler and library support for the \ ^ conftest.cpp(101): error: namespace "std" has no member "unordered_multiset" std::unordered_multiset s; ^ conftest.cpp(101): error: type name is not allowed std::unordered_multiset s; ^ conftest.cpp(101): error: identifier "s" is undefined std::unordered_multiset s; ^ compilation aborted for conftest.cpp (code 2) configure:30498: $? = 2 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "libmesh" | #define PACKAGE_TARNAME "libmesh" | #define PACKAGE_VERSION "1.2.1" | #define PACKAGE_STRING "libmesh 1.2.1" | #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net" | #define PACKAGE_URL "http://libmesh.github.io" | #define CONFIGURE_INFO "../libMesh/configure '--prefix=/home/asbhalla/softwares/libMesh-Git/linux-opt' '--with-methods=opt' 'PETSC_DIR=/home/asbhalla/softwares/PETSc-BitBucket/PETSc' 'PETSC_ARCH=linux-opt' 'CC=mpicc' 'CXX=mpicxx' 'FC=mpif90' 'F77=mpif90' '--with-boost=/home/asbhalla/softwares/boost/1.67.0' '--enable-exodus' '--enable-triangle' '--disable-glibcxx-debugging' '--disable-openmp' '--disable-perflog' '--disable-strict-lgpl' '--disable-pthreads' '--disable-cppthreads' 'LDFLAGS=-L/lib64'" | #define PACKAGE "libmesh" | #define VERSION "1.2.1" | #define HAVE_CXX11 1 | #define HAVE_CXX11_MOVE 1 | #define HAVE_CXX11_RANGEFOR 1 | #define HAVE_CXX11_DECLTYPE 1 | #define HAVE_CXX11_RVALUE_REFERENCES 1 | #define HAVE_CXX11_AUTO 1 | #define HAVE_CXX11_LAMBDA 1 | #define HAVE_CXX11_CONSTEXPR 1 | #define HAVE_CXX11_ALIAS_DECLARATIONS 1 | #define HAVE_CXX11_SHARED_PTR 1 | #define HAVE_CXX11_UNIQUE_PTR 1 | #define HAVE_CXX11_MAKE_UNIQUE_WORKAROUND 1 | #define HAVE_CXX11_OVERRIDE 1 | #define HAVE_CXX11_INITIALIZER_LIST 1 | #define HAVE_CXX11_VARIADIC_TEMPLATES 1 | #define HAVE_CXX11_THREAD 1 | #define HAVE_CXX11_CONDITION_VARIABLE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT_COMPLEX 1 | #define HAVE_CXX11_DELETED_FUNCTIONS 1 | #define HAVE_CXX11_FINAL 1 | #define HAVE_CXX11_NULLPTR 1 | #define HAVE_CXX11_TO_STRING 1 | #define HAVE_CXX11_NOEXCEPT 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MAJOR_VERSION 1 | #define MINOR_VERSION 2 | #define MICRO_VERSION 1 | #define LIB_VERSION "1.2.1" | #define LIB_RELEASE "" | #define CXX "mpicxx" | #define IO_COMPATIBILITY_VERSION "0.7.4" | #define HAVE_NAMESPACES /**/ | #define DEFAULT_DOUBLE_PRECISION 1 | #define DEFAULT_SCALAR_TYPE double | #define restrict __restrict | #define HAVE_GETPWUID 1 | #define ENABLE_EXCEPTIONS 1 | #define ENABLE_TIMESTAMPS 1 | #define SIZEOF_SHORT_INT 2 | #define SIZEOF_INT 4 | #define SIZEOF_UNSIGNED_INT 4 | #define SIZEOF_SIZE_T 8 | #define SIZEOF_LONG_INT 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_VOID_P 8 | #define SIZEOF_FUNCTION_POINTER 8 | #define HAVE_RTTI /**/ | #define HAVE_GETOPT_H 1 | #define HAVE_CSIGNAL 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_LOCALE /**/ | #define HAVE_SSTREAM /**/ | #define HAVE_STRINGSTREAM /**/ | #define HAVE_FENV_H 1 | #define HAVE_XMMINTRIN_H 1 | #define HAVE_FEENABLEEXCEPT 1 | #define HAVE_FEDISABLEEXCEPT 1 | #define HAVE_TR1_UNORDERED_MULTIMAP 1 | #define BEST_UNORDERED_MULTIMAP std::tr1::unordered_multimap | #define INCLUDE_UNORDERED_MULTIMAP | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_TR1_UNORDERED_MAP 1 | #define BEST_UNORDERED_MAP std::tr1::unordered_map | #define INCLUDE_UNORDERED_MAP | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | /* end confdefs.h. */ | #include | int | main () | { | | std::unordered_multiset s; | s.insert(1); | s.insert(1); | if (s.size() != 2) return 1; | | ; | return 0; | } configure:30512: result: no configure:30535: checking whether the compiler supports std::tr1::unordered_multiset configure:30563: mpicxx -c -Kc++eh -Krtti -O1 -w1 -inline_debug_info -g -wd504 conftest.cpp >&5 icpc: command line remark #10148: option '-inline_debug_info' not supported configure:30563: $? = 0 configure:30577: result: yes configure:30800: checking whether the compiler supports std::unordered_set configure:30827: mpicxx -c -Kc++eh -Krtti -O1 -w1 -inline_debug_info -g -wd504 conftest.cpp >&5 icpc: command line remark #10148: option '-inline_debug_info' not supported In file included from /usr/include/c++/4.8.5/unordered_set(35), from conftest.cpp(101): /usr/include/c++/4.8.5/bits/c++0x_warning.h(32): error: #error directive: This file requires compiler and library support for the ISO C++ 2011 standard. This support is currently experimental, and must be enabled with the -std=c++11 or -std=gnu++11 compiler options. #error This file requires compiler and library support for the \ ^ conftest.cpp(106): error: namespace "std" has no member "unordered_set" std::unordered_set m; ^ conftest.cpp(106): error: type name is not allowed std::unordered_set m; ^ conftest.cpp(106): error: identifier "m" is undefined std::unordered_set m; ^ compilation aborted for conftest.cpp (code 2) configure:30827: $? = 2 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "libmesh" | #define PACKAGE_TARNAME "libmesh" | #define PACKAGE_VERSION "1.2.1" | #define PACKAGE_STRING "libmesh 1.2.1" | #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net" | #define PACKAGE_URL "http://libmesh.github.io" | #define CONFIGURE_INFO "../libMesh/configure '--prefix=/home/asbhalla/softwares/libMesh-Git/linux-opt' '--with-methods=opt' 'PETSC_DIR=/home/asbhalla/softwares/PETSc-BitBucket/PETSc' 'PETSC_ARCH=linux-opt' 'CC=mpicc' 'CXX=mpicxx' 'FC=mpif90' 'F77=mpif90' '--with-boost=/home/asbhalla/softwares/boost/1.67.0' '--enable-exodus' '--enable-triangle' '--disable-glibcxx-debugging' '--disable-openmp' '--disable-perflog' '--disable-strict-lgpl' '--disable-pthreads' '--disable-cppthreads' 'LDFLAGS=-L/lib64'" | #define PACKAGE "libmesh" | #define VERSION "1.2.1" | #define HAVE_CXX11 1 | #define HAVE_CXX11_MOVE 1 | #define HAVE_CXX11_RANGEFOR 1 | #define HAVE_CXX11_DECLTYPE 1 | #define HAVE_CXX11_RVALUE_REFERENCES 1 | #define HAVE_CXX11_AUTO 1 | #define HAVE_CXX11_LAMBDA 1 | #define HAVE_CXX11_CONSTEXPR 1 | #define HAVE_CXX11_ALIAS_DECLARATIONS 1 | #define HAVE_CXX11_SHARED_PTR 1 | #define HAVE_CXX11_UNIQUE_PTR 1 | #define HAVE_CXX11_MAKE_UNIQUE_WORKAROUND 1 | #define HAVE_CXX11_OVERRIDE 1 | #define HAVE_CXX11_INITIALIZER_LIST 1 | #define HAVE_CXX11_VARIADIC_TEMPLATES 1 | #define HAVE_CXX11_THREAD 1 | #define HAVE_CXX11_CONDITION_VARIABLE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT_COMPLEX 1 | #define HAVE_CXX11_DELETED_FUNCTIONS 1 | #define HAVE_CXX11_FINAL 1 | #define HAVE_CXX11_NULLPTR 1 | #define HAVE_CXX11_TO_STRING 1 | #define HAVE_CXX11_NOEXCEPT 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MAJOR_VERSION 1 | #define MINOR_VERSION 2 | #define MICRO_VERSION 1 | #define LIB_VERSION "1.2.1" | #define LIB_RELEASE "" | #define CXX "mpicxx" | #define IO_COMPATIBILITY_VERSION "0.7.4" | #define HAVE_NAMESPACES /**/ | #define DEFAULT_DOUBLE_PRECISION 1 | #define DEFAULT_SCALAR_TYPE double | #define restrict __restrict | #define HAVE_GETPWUID 1 | #define ENABLE_EXCEPTIONS 1 | #define ENABLE_TIMESTAMPS 1 | #define SIZEOF_SHORT_INT 2 | #define SIZEOF_INT 4 | #define SIZEOF_UNSIGNED_INT 4 | #define SIZEOF_SIZE_T 8 | #define SIZEOF_LONG_INT 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_VOID_P 8 | #define SIZEOF_FUNCTION_POINTER 8 | #define HAVE_RTTI /**/ | #define HAVE_GETOPT_H 1 | #define HAVE_CSIGNAL 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_LOCALE /**/ | #define HAVE_SSTREAM /**/ | #define HAVE_STRINGSTREAM /**/ | #define HAVE_FENV_H 1 | #define HAVE_XMMINTRIN_H 1 | #define HAVE_FEENABLEEXCEPT 1 | #define HAVE_FEDISABLEEXCEPT 1 | #define HAVE_TR1_UNORDERED_MULTIMAP 1 | #define BEST_UNORDERED_MULTIMAP std::tr1::unordered_multimap | #define INCLUDE_UNORDERED_MULTIMAP | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_TR1_UNORDERED_MAP 1 | #define BEST_UNORDERED_MAP std::tr1::unordered_map | #define INCLUDE_UNORDERED_MAP | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_TR1_UNORDERED_MULTISET 1 | #define BEST_UNORDERED_MULTISET std::tr1::unordered_multiset | #define INCLUDE_UNORDERED_MULTISET | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | /* end confdefs.h. */ | #include | int | main () | { | | std::unordered_set m; | m.insert(1); | m.insert(2); | | ; | return 0; | } configure:30841: result: no configure:30864: checking whether the compiler supports std::tr1::unordered_set configure:30890: mpicxx -c -Kc++eh -Krtti -O1 -w1 -inline_debug_info -g -wd504 conftest.cpp >&5 icpc: command line remark #10148: option '-inline_debug_info' not supported configure:30890: $? = 0 configure:30904: result: yes configure:31381: checking whether the compiler supports std::hash configure:31407: mpicxx -c -Kc++eh -Krtti -O1 -w1 -inline_debug_info -g -wd504 conftest.cpp >&5 icpc: command line remark #10148: option '-inline_debug_info' not supported conftest.cpp(111): error: namespace "std" has no member "hash" std::hash m; ^ conftest.cpp(111): error: type name is not allowed std::hash m; ^ conftest.cpp(111): error: identifier "m" is undefined std::hash m; ^ compilation aborted for conftest.cpp (code 2) configure:31407: $? = 2 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "libmesh" | #define PACKAGE_TARNAME "libmesh" | #define PACKAGE_VERSION "1.2.1" | #define PACKAGE_STRING "libmesh 1.2.1" | #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net" | #define PACKAGE_URL "http://libmesh.github.io" | #define CONFIGURE_INFO "../libMesh/configure '--prefix=/home/asbhalla/softwares/libMesh-Git/linux-opt' '--with-methods=opt' 'PETSC_DIR=/home/asbhalla/softwares/PETSc-BitBucket/PETSc' 'PETSC_ARCH=linux-opt' 'CC=mpicc' 'CXX=mpicxx' 'FC=mpif90' 'F77=mpif90' '--with-boost=/home/asbhalla/softwares/boost/1.67.0' '--enable-exodus' '--enable-triangle' '--disable-glibcxx-debugging' '--disable-openmp' '--disable-perflog' '--disable-strict-lgpl' '--disable-pthreads' '--disable-cppthreads' 'LDFLAGS=-L/lib64'" | #define PACKAGE "libmesh" | #define VERSION "1.2.1" | #define HAVE_CXX11 1 | #define HAVE_CXX11_MOVE 1 | #define HAVE_CXX11_RANGEFOR 1 | #define HAVE_CXX11_DECLTYPE 1 | #define HAVE_CXX11_RVALUE_REFERENCES 1 | #define HAVE_CXX11_AUTO 1 | #define HAVE_CXX11_LAMBDA 1 | #define HAVE_CXX11_CONSTEXPR 1 | #define HAVE_CXX11_ALIAS_DECLARATIONS 1 | #define HAVE_CXX11_SHARED_PTR 1 | #define HAVE_CXX11_UNIQUE_PTR 1 | #define HAVE_CXX11_MAKE_UNIQUE_WORKAROUND 1 | #define HAVE_CXX11_OVERRIDE 1 | #define HAVE_CXX11_INITIALIZER_LIST 1 | #define HAVE_CXX11_VARIADIC_TEMPLATES 1 | #define HAVE_CXX11_THREAD 1 | #define HAVE_CXX11_CONDITION_VARIABLE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT_COMPLEX 1 | #define HAVE_CXX11_DELETED_FUNCTIONS 1 | #define HAVE_CXX11_FINAL 1 | #define HAVE_CXX11_NULLPTR 1 | #define HAVE_CXX11_TO_STRING 1 | #define HAVE_CXX11_NOEXCEPT 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MAJOR_VERSION 1 | #define MINOR_VERSION 2 | #define MICRO_VERSION 1 | #define LIB_VERSION "1.2.1" | #define LIB_RELEASE "" | #define CXX "mpicxx" | #define IO_COMPATIBILITY_VERSION "0.7.4" | #define HAVE_NAMESPACES /**/ | #define DEFAULT_DOUBLE_PRECISION 1 | #define DEFAULT_SCALAR_TYPE double | #define restrict __restrict | #define HAVE_GETPWUID 1 | #define ENABLE_EXCEPTIONS 1 | #define ENABLE_TIMESTAMPS 1 | #define SIZEOF_SHORT_INT 2 | #define SIZEOF_INT 4 | #define SIZEOF_UNSIGNED_INT 4 | #define SIZEOF_SIZE_T 8 | #define SIZEOF_LONG_INT 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_VOID_P 8 | #define SIZEOF_FUNCTION_POINTER 8 | #define HAVE_RTTI /**/ | #define HAVE_GETOPT_H 1 | #define HAVE_CSIGNAL 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_LOCALE /**/ | #define HAVE_SSTREAM /**/ | #define HAVE_STRINGSTREAM /**/ | #define HAVE_FENV_H 1 | #define HAVE_XMMINTRIN_H 1 | #define HAVE_FEENABLEEXCEPT 1 | #define HAVE_FEDISABLEEXCEPT 1 | #define HAVE_TR1_UNORDERED_MULTIMAP 1 | #define BEST_UNORDERED_MULTIMAP std::tr1::unordered_multimap | #define INCLUDE_UNORDERED_MULTIMAP | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_TR1_UNORDERED_MAP 1 | #define BEST_UNORDERED_MAP std::tr1::unordered_map | #define INCLUDE_UNORDERED_MAP | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_TR1_UNORDERED_MULTISET 1 | #define BEST_UNORDERED_MULTISET std::tr1::unordered_multiset | #define INCLUDE_UNORDERED_MULTISET | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_TR1_UNORDERED_SET 1 | #define BEST_UNORDERED_SET std::tr1::unordered_set | #define INCLUDE_UNORDERED_SET | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | /* end confdefs.h. */ | #include | int | main () | { | | std::hash m; | std::size_t hashed = m(12345); | | ; | return 0; | } configure:31421: result: no configure:31444: checking whether the compiler supports std::tr1::hash configure:31470: mpicxx -c -Kc++eh -Krtti -O1 -w1 -inline_debug_info -g -wd504 conftest.cpp >&5 icpc: command line remark #10148: option '-inline_debug_info' not supported configure:31470: $? = 0 configure:31484: result: yes configure:31581: checking for library containing dlopen configure:31612: mpicxx -o conftest -Kc++eh -Krtti -O1 -w1 -inline_debug_info -g -wd504 -L/lib64 conftest.cpp >&5 icpc: command line remark #10148: option '-inline_debug_info' not supported configure:31612: $? = 0 configure:31629: result: none required configure:31645: checking whether the c++ compiler supports dlopen/dlsym/dlclose configure:31700: mpicxx -o conftest -Kc++eh -Krtti -O1 -w1 -inline_debug_info -g -wd504 -L/lib64 conftest.cpp >&5 icpc: command line remark #10148: option '-inline_debug_info' not supported configure:31700: $? = 0 configure:31702: result: yes configure:31731: checking whether the compiler supports GCC C++ ABI name demangling configure:31766: mpicxx -c -Kc++eh -Krtti -O1 -w1 -inline_debug_info -g -wd504 conftest.cpp >&5 icpc: command line remark #10148: option '-inline_debug_info' not supported configure:31766: $? = 0 configure:31780: result: yes configure:31788: checking whether the c++ compiler supports glibc backtrace configure:31814: mpicxx -c -Kc++eh -Krtti -O1 -w1 -inline_debug_info -g -wd504 conftest.cpp >&5 icpc: command line remark #10148: option '-inline_debug_info' not supported configure:31814: $? = 0 configure:31828: result: yes configure:31850: checking if errno.h can be wrapped in namespace configure:31870: mpicxx -c -Kc++eh -Krtti -O1 -w1 -inline_debug_info -g -wd504 conftest.cpp >&5 icpc: command line remark #10148: option '-inline_debug_info' not supported configure:31870: $? = 0 configure:31872: result: yes configure:31953: result: --------------------------------------------- configure:31955: result: ----- Done configuring compiler features ---- configure:31957: result: --------------------------------------------- configure:32101: result: --------------------------------------------- configure:32103: result: ----- Configuring core library features ----- configure:32105: result: --------------------------------------------- configure:32129: result: configuring gdb command... "gdb" configure:32160: result: <<< Configuring library with a non-deprecated UniquePtr implementation >>> configure:32187: result: <<< Configuring library with warnings >>> configure:32236: result: <<< Configuring library to disable libMesh::CommWorld >>> configure:32263: result: <<< Configuring library to require ``include "libmesh/etc.h"'' style >>> configure:32286: result: <<< Configuring library to keep names in libMesh namespace >>> configure:32331: result: configuring size of boundary_id... 2 configure:32372: result: configuring size of dof_id... 4 configure:32413: result: configuring size of processor_id... 2 configure:32454: result: configuring size of subdomain_id... 2 configure:32588: result: <<< Configuring library with AMR support >>> configure:32610: result: <<< Configuring library with variational smoother support >>> configure:32632: result: <<< Configuring library with periodic BC support >>> configure:32654: result: <<< Configuring library with Dirichlet constraint support >>> configure:32720: result: <<< Configuring library to use ghosted local vectors >>> configure:32743: result: <<< Configuring library to store node valence >>> configure:32805: result: <<< Configuring library with higher order p-FEM shapes >>> configure:32859: result: <<< Configuring library with second derivatives >>> configure:32880: checking rpc/rpc.h usability configure:32880: mpicxx -c -std=gnu++11 conftest.cpp >&5 configure:32880: $? = 0 configure:32880: result: yes configure:32880: checking rpc/rpc.h presence configure:32880: mpicxx -E conftest.cpp configure:32880: $? = 0 configure:32880: result: yes configure:32880: checking for rpc/rpc.h configure:32880: result: yes configure:32886: checking for xdrstdio_create configure:32886: mpicxx -o conftest -std=gnu++11 -L/lib64 conftest.cpp >&5 configure:32886: $? = 0 configure:32886: result: yes configure:32964: result: <<< Configuring library with real number support >>> configure:32996: result: <<< Configuring library with reference counting support >>> configure:33045: result: <<< Configuring library example suite support >>> configure:33058: result: --------------------------------------------- configure:33060: result: -- Done configuring core library features --- configure:33062: result: --------------------------------------------- configure:33122: result: --------------------------------------------- configure:33124: result: ----- Configuring for optional packages ----- configure:33126: result: --------------------------------------------- configure:33243: checking for boostlib >= 1.57.0 configure:33314: mpicxx -c -std=gnu++11 -I/home/asbhalla/softwares/boost/1.67.0/include conftest.cpp >&5 configure:33314: $? = 0 configure:33316: result: yes configure:33454: result: <<< Using external boost installation >>> configure:33781: checking for boost::movelib::unique_ptr support configure:33810: mpicxx -c -std=gnu++11 -I/home/asbhalla/softwares/boost/1.67.0/include conftest.cpp >&5 configure:33810: $? = 0 configure:33813: result: yes configure:33960: result: <<< Howard Hinnant's unique_ptr implementation explicitly disabled >>> configure:33996: checking if safe_bool allows boolean comparisons configure:34029: mpicxx -c -std=gnu++11 -I../libMesh/include/utils conftest.cpp >&5 configure:34029: $? = 0 configure:34032: result: yes configure:34044: checking if safe_bool prevents implicit conversions configure:34077: mpicxx -c -std=gnu++11 -I../libMesh/include/utils conftest.cpp >&5 ../libMesh/include/utils/safe_bool.h(96): error #308: function "libMesh::safe_bool_base::this_type_does_not_support_comparisons" (declared at line 48) is inaccessible lhs.this_type_does_not_support_comparisons(); ^ detected during instantiation of "bool libMesh::operator==(const libMesh::safe_bool &, const libMesh::safe_bool &) [with T=Foo, U=Foo]" at line 158 of "conftest.cpp" compilation aborted for conftest.cpp (code 2) configure:34077: $? = 2 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "libmesh" | #define PACKAGE_TARNAME "libmesh" | #define PACKAGE_VERSION "1.2.1" | #define PACKAGE_STRING "libmesh 1.2.1" | #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net" | #define PACKAGE_URL "http://libmesh.github.io" | #define CONFIGURE_INFO "../libMesh/configure '--prefix=/home/asbhalla/softwares/libMesh-Git/linux-opt' '--with-methods=opt' 'PETSC_DIR=/home/asbhalla/softwares/PETSc-BitBucket/PETSc' 'PETSC_ARCH=linux-opt' 'CC=mpicc' 'CXX=mpicxx' 'FC=mpif90' 'F77=mpif90' '--with-boost=/home/asbhalla/softwares/boost/1.67.0' '--enable-exodus' '--enable-triangle' '--disable-glibcxx-debugging' '--disable-openmp' '--disable-perflog' '--disable-strict-lgpl' '--disable-pthreads' '--disable-cppthreads' 'LDFLAGS=-L/lib64'" | #define PACKAGE "libmesh" | #define VERSION "1.2.1" | #define HAVE_CXX11 1 | #define HAVE_CXX11_MOVE 1 | #define HAVE_CXX11_RANGEFOR 1 | #define HAVE_CXX11_DECLTYPE 1 | #define HAVE_CXX11_RVALUE_REFERENCES 1 | #define HAVE_CXX11_AUTO 1 | #define HAVE_CXX11_LAMBDA 1 | #define HAVE_CXX11_CONSTEXPR 1 | #define HAVE_CXX11_ALIAS_DECLARATIONS 1 | #define HAVE_CXX11_SHARED_PTR 1 | #define HAVE_CXX11_UNIQUE_PTR 1 | #define HAVE_CXX11_MAKE_UNIQUE_WORKAROUND 1 | #define HAVE_CXX11_OVERRIDE 1 | #define HAVE_CXX11_INITIALIZER_LIST 1 | #define HAVE_CXX11_VARIADIC_TEMPLATES 1 | #define HAVE_CXX11_THREAD 1 | #define HAVE_CXX11_CONDITION_VARIABLE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT_COMPLEX 1 | #define HAVE_CXX11_DELETED_FUNCTIONS 1 | #define HAVE_CXX11_FINAL 1 | #define HAVE_CXX11_NULLPTR 1 | #define HAVE_CXX11_TO_STRING 1 | #define HAVE_CXX11_NOEXCEPT 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MAJOR_VERSION 1 | #define MINOR_VERSION 2 | #define MICRO_VERSION 1 | #define LIB_VERSION "1.2.1" | #define LIB_RELEASE "" | #define CXX "mpicxx" | #define IO_COMPATIBILITY_VERSION "0.7.4" | #define HAVE_NAMESPACES /**/ | #define DEFAULT_DOUBLE_PRECISION 1 | #define DEFAULT_SCALAR_TYPE double | #define restrict __restrict | #define HAVE_GETPWUID 1 | #define ENABLE_EXCEPTIONS 1 | #define ENABLE_TIMESTAMPS 1 | #define SIZEOF_SHORT_INT 2 | #define SIZEOF_INT 4 | #define SIZEOF_UNSIGNED_INT 4 | #define SIZEOF_SIZE_T 8 | #define SIZEOF_LONG_INT 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_VOID_P 8 | #define SIZEOF_FUNCTION_POINTER 8 | #define HAVE_RTTI /**/ | #define HAVE_GETOPT_H 1 | #define HAVE_CSIGNAL 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_LOCALE /**/ | #define HAVE_SSTREAM /**/ | #define HAVE_STRINGSTREAM /**/ | #define HAVE_FENV_H 1 | #define HAVE_XMMINTRIN_H 1 | #define HAVE_FEENABLEEXCEPT 1 | #define HAVE_FEDISABLEEXCEPT 1 | #define HAVE_TR1_UNORDERED_MULTIMAP 1 | #define BEST_UNORDERED_MULTIMAP std::tr1::unordered_multimap | #define INCLUDE_UNORDERED_MULTIMAP | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_TR1_UNORDERED_MAP 1 | #define BEST_UNORDERED_MAP std::tr1::unordered_map | #define INCLUDE_UNORDERED_MAP | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_TR1_UNORDERED_MULTISET 1 | #define BEST_UNORDERED_MULTISET std::tr1::unordered_multiset | #define INCLUDE_UNORDERED_MULTISET | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_TR1_UNORDERED_SET 1 | #define BEST_UNORDERED_SET std::tr1::unordered_set | #define INCLUDE_UNORDERED_SET | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_TR1_HASH 1 | #define BEST_HASH std::tr1::hash | #define INCLUDE_HASH | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_DLOPEN 1 | #define HAVE_GCC_ABI_DEMANGLE 1 | #define HAVE_GLIBC_BACKTRACE 1 | #define GDB_COMMAND "gdb" | #define ENABLE_UNIQUE_PTR 1 | #define ENABLE_WARNINGS 1 | #define DISABLE_COMMWORLD 1 | #define REQUIRE_SEPARATE_NAMESPACE 1 | #define BOUNDARY_ID_BYTES 2 | #define DOF_ID_BYTES 4 | #define PROCESSOR_ID_BYTES 2 | #define SUBDOMAIN_ID_BYTES 2 | #define UNIQUE_ID_BYTES 8 | #define ENABLE_AMR 1 | #define ENABLE_VSMOOTHER 1 | #define ENABLE_PERIODIC 1 | #define ENABLE_DIRICHLET 1 | #define ENABLE_GHOSTED 1 | #define ENABLE_NODE_VALENCE 1 | #define DIM 3 | #define ENABLE_HIGHER_ORDER_SHAPES 1 | #define ENABLE_SECOND_DERIVATIVES 1 | #define HAVE_RPC_RPC_H 1 | #define HAVE_XDR 1 | #define USE_REAL_NUMBERS 1 | #define ENABLE_REFERENCE_COUNTING 1 | #define HAVE_BOOST /**/ | #define HAVE_BOOST_MOVELIB_UNIQUE_PTR 1 | /* end confdefs.h. */ | | #include "safe_bool.h" | using namespace libMesh; | class Foo : public safe_bool | { | public: | bool boolean_test() const | { | // This dummy class just returns true for operator bool() | return true; | } | }; | | int | main () | { | | { | Foo foo1, foo2; | if (foo1 == foo2) | return 1; | return 0; | } | | ; | return 0; | } configure:34085: result: yes configure:34103: result: <<< Compiling libmesh with safe_bool support >>> configure:34235: checking /home/asbhalla/softwares/PETSc-BitBucket/PETSc/include/petscversion.h usability configure:34235: mpicc -c conftest.c >&5 configure:34235: $? = 0 configure:34235: result: yes configure:34235: checking /home/asbhalla/softwares/PETSc-BitBucket/PETSc/include/petscversion.h presence configure:34235: mpicc -E conftest.c configure:34235: $? = 0 configure:34235: result: yes configure:34235: checking for /home/asbhalla/softwares/PETSc-BitBucket/PETSc/include/petscversion.h configure:34235: result: yes configure:34308: result: <<< Attempting to configure library with MPI from PETSC config... >>> configure:34826: result: <<< Found PETSc 3.10.4 installation in /home/asbhalla/softwares/PETSc-BitBucket/PETSc ... >>> configure:34931: checking whether we can compile a trivial PETSc program configure:34960: mpicxx -c -std=gnu++11 -I/home/asbhalla/softwares/PETSc-BitBucket/PETSc/include -I/home/asbhalla/softwares/PETSc-BitBucket/PETSc/linux-opt/include -I/home/asbhalla/softwares/PETSc-BitBucket/PETSc/linux-opt/include -I/home/asbhalla/softwares/PETSc-BitBucket/PETSc/include -I/home/asbhalla/softwares/PETSc-BitBucket/PETSc/linux-opt/include conftest.cpp >&5 configure:34960: $? = 0 configure:34962: result: yes configure:34987: checking for TAO support via PETSc configure:35019: mpicc -c -I/home/asbhalla/softwares/PETSc-BitBucket/PETSc/include -I/home/asbhalla/softwares/PETSc-BitBucket/PETSc/linux-opt/include -I/home/asbhalla/softwares/PETSc-BitBucket/PETSc/linux-opt/include -I/home/asbhalla/softwares/PETSc-BitBucket/PETSc/include -I/home/asbhalla/softwares/PETSc-BitBucket/PETSc/linux-opt/include conftest.c >&5 configure:35019: $? = 0 configure:35021: result: yes configure:36797: checking /usr/lib/slepc/include/slepcversion.h usability configure:36797: mpicxx -c -std=gnu++11 conftest.cpp >&5 conftest.cpp(179): catastrophic error: cannot open source file "/usr/lib/slepc/include/slepcversion.h" #include ^ compilation aborted for conftest.cpp (code 4) configure:36797: $? = 4 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "libmesh" | #define PACKAGE_TARNAME "libmesh" | #define PACKAGE_VERSION "1.2.1" | #define PACKAGE_STRING "libmesh 1.2.1" | #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net" | #define PACKAGE_URL "http://libmesh.github.io" | #define CONFIGURE_INFO "../libMesh/configure '--prefix=/home/asbhalla/softwares/libMesh-Git/linux-opt' '--with-methods=opt' 'PETSC_DIR=/home/asbhalla/softwares/PETSc-BitBucket/PETSc' 'PETSC_ARCH=linux-opt' 'CC=mpicc' 'CXX=mpicxx' 'FC=mpif90' 'F77=mpif90' '--with-boost=/home/asbhalla/softwares/boost/1.67.0' '--enable-exodus' '--enable-triangle' '--disable-glibcxx-debugging' '--disable-openmp' '--disable-perflog' '--disable-strict-lgpl' '--disable-pthreads' '--disable-cppthreads' 'LDFLAGS=-L/lib64'" | #define PACKAGE "libmesh" | #define VERSION "1.2.1" | #define HAVE_CXX11 1 | #define HAVE_CXX11_MOVE 1 | #define HAVE_CXX11_RANGEFOR 1 | #define HAVE_CXX11_DECLTYPE 1 | #define HAVE_CXX11_RVALUE_REFERENCES 1 | #define HAVE_CXX11_AUTO 1 | #define HAVE_CXX11_LAMBDA 1 | #define HAVE_CXX11_CONSTEXPR 1 | #define HAVE_CXX11_ALIAS_DECLARATIONS 1 | #define HAVE_CXX11_SHARED_PTR 1 | #define HAVE_CXX11_UNIQUE_PTR 1 | #define HAVE_CXX11_MAKE_UNIQUE_WORKAROUND 1 | #define HAVE_CXX11_OVERRIDE 1 | #define HAVE_CXX11_INITIALIZER_LIST 1 | #define HAVE_CXX11_VARIADIC_TEMPLATES 1 | #define HAVE_CXX11_THREAD 1 | #define HAVE_CXX11_CONDITION_VARIABLE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT_COMPLEX 1 | #define HAVE_CXX11_DELETED_FUNCTIONS 1 | #define HAVE_CXX11_FINAL 1 | #define HAVE_CXX11_NULLPTR 1 | #define HAVE_CXX11_TO_STRING 1 | #define HAVE_CXX11_NOEXCEPT 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MAJOR_VERSION 1 | #define MINOR_VERSION 2 | #define MICRO_VERSION 1 | #define LIB_VERSION "1.2.1" | #define LIB_RELEASE "" | #define CXX "mpicxx" | #define IO_COMPATIBILITY_VERSION "0.7.4" | #define HAVE_NAMESPACES /**/ | #define DEFAULT_DOUBLE_PRECISION 1 | #define DEFAULT_SCALAR_TYPE double | #define restrict __restrict | #define HAVE_GETPWUID 1 | #define ENABLE_EXCEPTIONS 1 | #define ENABLE_TIMESTAMPS 1 | #define SIZEOF_SHORT_INT 2 | #define SIZEOF_INT 4 | #define SIZEOF_UNSIGNED_INT 4 | #define SIZEOF_SIZE_T 8 | #define SIZEOF_LONG_INT 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_VOID_P 8 | #define SIZEOF_FUNCTION_POINTER 8 | #define HAVE_RTTI /**/ | #define HAVE_GETOPT_H 1 | #define HAVE_CSIGNAL 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_LOCALE /**/ | #define HAVE_SSTREAM /**/ | #define HAVE_STRINGSTREAM /**/ | #define HAVE_FENV_H 1 | #define HAVE_XMMINTRIN_H 1 | #define HAVE_FEENABLEEXCEPT 1 | #define HAVE_FEDISABLEEXCEPT 1 | #define HAVE_TR1_UNORDERED_MULTIMAP 1 | #define BEST_UNORDERED_MULTIMAP std::tr1::unordered_multimap | #define INCLUDE_UNORDERED_MULTIMAP | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_TR1_UNORDERED_MAP 1 | #define BEST_UNORDERED_MAP std::tr1::unordered_map | #define INCLUDE_UNORDERED_MAP | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_TR1_UNORDERED_MULTISET 1 | #define BEST_UNORDERED_MULTISET std::tr1::unordered_multiset | #define INCLUDE_UNORDERED_MULTISET | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_TR1_UNORDERED_SET 1 | #define BEST_UNORDERED_SET std::tr1::unordered_set | #define INCLUDE_UNORDERED_SET | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_TR1_HASH 1 | #define BEST_HASH std::tr1::hash | #define INCLUDE_HASH | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_DLOPEN 1 | #define HAVE_GCC_ABI_DEMANGLE 1 | #define HAVE_GLIBC_BACKTRACE 1 | #define GDB_COMMAND "gdb" | #define ENABLE_UNIQUE_PTR 1 | #define ENABLE_WARNINGS 1 | #define DISABLE_COMMWORLD 1 | #define REQUIRE_SEPARATE_NAMESPACE 1 | #define BOUNDARY_ID_BYTES 2 | #define DOF_ID_BYTES 4 | #define PROCESSOR_ID_BYTES 2 | #define SUBDOMAIN_ID_BYTES 2 | #define UNIQUE_ID_BYTES 8 | #define ENABLE_AMR 1 | #define ENABLE_VSMOOTHER 1 | #define ENABLE_PERIODIC 1 | #define ENABLE_DIRICHLET 1 | #define ENABLE_GHOSTED 1 | #define ENABLE_NODE_VALENCE 1 | #define DIM 3 | #define ENABLE_HIGHER_ORDER_SHAPES 1 | #define ENABLE_SECOND_DERIVATIVES 1 | #define HAVE_RPC_RPC_H 1 | #define HAVE_XDR 1 | #define USE_REAL_NUMBERS 1 | #define ENABLE_REFERENCE_COUNTING 1 | #define HAVE_BOOST /**/ | #define HAVE_BOOST_MOVELIB_UNIQUE_PTR 1 | #define DETECTED_PETSC_VERSION_MAJOR 3 | #define DETECTED_PETSC_VERSION_MINOR 10 | #define DETECTED_PETSC_VERSION_SUBMINOR 4 | #define DETECTED_PETSC_VERSION_RELEASE 1 | #define HAVE_MPI 1 | #define HAVE_PETSC 1 | #define HAVE_PETSC_TAO 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #include configure:36797: result: no configure:36797: checking /usr/lib/slepc/include/slepcversion.h presence configure:36797: mpicxx -E conftest.cpp conftest.cpp(146): error #2379: cannot open source file "/usr/lib/slepc/include/slepcversion.h" #include ^ configure:36797: $? = 2 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "libmesh" | #define PACKAGE_TARNAME "libmesh" | #define PACKAGE_VERSION "1.2.1" | #define PACKAGE_STRING "libmesh 1.2.1" | #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net" | #define PACKAGE_URL "http://libmesh.github.io" | #define CONFIGURE_INFO "../libMesh/configure '--prefix=/home/asbhalla/softwares/libMesh-Git/linux-opt' '--with-methods=opt' 'PETSC_DIR=/home/asbhalla/softwares/PETSc-BitBucket/PETSc' 'PETSC_ARCH=linux-opt' 'CC=mpicc' 'CXX=mpicxx' 'FC=mpif90' 'F77=mpif90' '--with-boost=/home/asbhalla/softwares/boost/1.67.0' '--enable-exodus' '--enable-triangle' '--disable-glibcxx-debugging' '--disable-openmp' '--disable-perflog' '--disable-strict-lgpl' '--disable-pthreads' '--disable-cppthreads' 'LDFLAGS=-L/lib64'" | #define PACKAGE "libmesh" | #define VERSION "1.2.1" | #define HAVE_CXX11 1 | #define HAVE_CXX11_MOVE 1 | #define HAVE_CXX11_RANGEFOR 1 | #define HAVE_CXX11_DECLTYPE 1 | #define HAVE_CXX11_RVALUE_REFERENCES 1 | #define HAVE_CXX11_AUTO 1 | #define HAVE_CXX11_LAMBDA 1 | #define HAVE_CXX11_CONSTEXPR 1 | #define HAVE_CXX11_ALIAS_DECLARATIONS 1 | #define HAVE_CXX11_SHARED_PTR 1 | #define HAVE_CXX11_UNIQUE_PTR 1 | #define HAVE_CXX11_MAKE_UNIQUE_WORKAROUND 1 | #define HAVE_CXX11_OVERRIDE 1 | #define HAVE_CXX11_INITIALIZER_LIST 1 | #define HAVE_CXX11_VARIADIC_TEMPLATES 1 | #define HAVE_CXX11_THREAD 1 | #define HAVE_CXX11_CONDITION_VARIABLE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT_COMPLEX 1 | #define HAVE_CXX11_DELETED_FUNCTIONS 1 | #define HAVE_CXX11_FINAL 1 | #define HAVE_CXX11_NULLPTR 1 | #define HAVE_CXX11_TO_STRING 1 | #define HAVE_CXX11_NOEXCEPT 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MAJOR_VERSION 1 | #define MINOR_VERSION 2 | #define MICRO_VERSION 1 | #define LIB_VERSION "1.2.1" | #define LIB_RELEASE "" | #define CXX "mpicxx" | #define IO_COMPATIBILITY_VERSION "0.7.4" | #define HAVE_NAMESPACES /**/ | #define DEFAULT_DOUBLE_PRECISION 1 | #define DEFAULT_SCALAR_TYPE double | #define restrict __restrict | #define HAVE_GETPWUID 1 | #define ENABLE_EXCEPTIONS 1 | #define ENABLE_TIMESTAMPS 1 | #define SIZEOF_SHORT_INT 2 | #define SIZEOF_INT 4 | #define SIZEOF_UNSIGNED_INT 4 | #define SIZEOF_SIZE_T 8 | #define SIZEOF_LONG_INT 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_VOID_P 8 | #define SIZEOF_FUNCTION_POINTER 8 | #define HAVE_RTTI /**/ | #define HAVE_GETOPT_H 1 | #define HAVE_CSIGNAL 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_LOCALE /**/ | #define HAVE_SSTREAM /**/ | #define HAVE_STRINGSTREAM /**/ | #define HAVE_FENV_H 1 | #define HAVE_XMMINTRIN_H 1 | #define HAVE_FEENABLEEXCEPT 1 | #define HAVE_FEDISABLEEXCEPT 1 | #define HAVE_TR1_UNORDERED_MULTIMAP 1 | #define BEST_UNORDERED_MULTIMAP std::tr1::unordered_multimap | #define INCLUDE_UNORDERED_MULTIMAP | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_TR1_UNORDERED_MAP 1 | #define BEST_UNORDERED_MAP std::tr1::unordered_map | #define INCLUDE_UNORDERED_MAP | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_TR1_UNORDERED_MULTISET 1 | #define BEST_UNORDERED_MULTISET std::tr1::unordered_multiset | #define INCLUDE_UNORDERED_MULTISET | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_TR1_UNORDERED_SET 1 | #define BEST_UNORDERED_SET std::tr1::unordered_set | #define INCLUDE_UNORDERED_SET | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_TR1_HASH 1 | #define BEST_HASH std::tr1::hash | #define INCLUDE_HASH | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_DLOPEN 1 | #define HAVE_GCC_ABI_DEMANGLE 1 | #define HAVE_GLIBC_BACKTRACE 1 | #define GDB_COMMAND "gdb" | #define ENABLE_UNIQUE_PTR 1 | #define ENABLE_WARNINGS 1 | #define DISABLE_COMMWORLD 1 | #define REQUIRE_SEPARATE_NAMESPACE 1 | #define BOUNDARY_ID_BYTES 2 | #define DOF_ID_BYTES 4 | #define PROCESSOR_ID_BYTES 2 | #define SUBDOMAIN_ID_BYTES 2 | #define UNIQUE_ID_BYTES 8 | #define ENABLE_AMR 1 | #define ENABLE_VSMOOTHER 1 | #define ENABLE_PERIODIC 1 | #define ENABLE_DIRICHLET 1 | #define ENABLE_GHOSTED 1 | #define ENABLE_NODE_VALENCE 1 | #define DIM 3 | #define ENABLE_HIGHER_ORDER_SHAPES 1 | #define ENABLE_SECOND_DERIVATIVES 1 | #define HAVE_RPC_RPC_H 1 | #define HAVE_XDR 1 | #define USE_REAL_NUMBERS 1 | #define ENABLE_REFERENCE_COUNTING 1 | #define HAVE_BOOST /**/ | #define HAVE_BOOST_MOVELIB_UNIQUE_PTR 1 | #define DETECTED_PETSC_VERSION_MAJOR 3 | #define DETECTED_PETSC_VERSION_MINOR 10 | #define DETECTED_PETSC_VERSION_SUBMINOR 4 | #define DETECTED_PETSC_VERSION_RELEASE 1 | #define HAVE_MPI 1 | #define HAVE_PETSC 1 | #define HAVE_PETSC_TAO 1 | /* end confdefs.h. */ | #include configure:36797: result: no configure:36797: checking for /usr/lib/slepc/include/slepcversion.h configure:36797: result: no configure:36802: result: <<< Invalid "$SLEPC_DIR" detected (slepcversion.h not found). SLEPc disabled. >>> configure:36817: checking /linux-opt/include/slepcconf.h usability configure:36817: mpicxx -c -std=gnu++11 conftest.cpp >&5 conftest.cpp(179): catastrophic error: cannot open source file "/linux-opt/include/slepcconf.h" #include ^ compilation aborted for conftest.cpp (code 4) configure:36817: $? = 4 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "libmesh" | #define PACKAGE_TARNAME "libmesh" | #define PACKAGE_VERSION "1.2.1" | #define PACKAGE_STRING "libmesh 1.2.1" | #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net" | #define PACKAGE_URL "http://libmesh.github.io" | #define CONFIGURE_INFO "../libMesh/configure '--prefix=/home/asbhalla/softwares/libMesh-Git/linux-opt' '--with-methods=opt' 'PETSC_DIR=/home/asbhalla/softwares/PETSc-BitBucket/PETSc' 'PETSC_ARCH=linux-opt' 'CC=mpicc' 'CXX=mpicxx' 'FC=mpif90' 'F77=mpif90' '--with-boost=/home/asbhalla/softwares/boost/1.67.0' '--enable-exodus' '--enable-triangle' '--disable-glibcxx-debugging' '--disable-openmp' '--disable-perflog' '--disable-strict-lgpl' '--disable-pthreads' '--disable-cppthreads' 'LDFLAGS=-L/lib64'" | #define PACKAGE "libmesh" | #define VERSION "1.2.1" | #define HAVE_CXX11 1 | #define HAVE_CXX11_MOVE 1 | #define HAVE_CXX11_RANGEFOR 1 | #define HAVE_CXX11_DECLTYPE 1 | #define HAVE_CXX11_RVALUE_REFERENCES 1 | #define HAVE_CXX11_AUTO 1 | #define HAVE_CXX11_LAMBDA 1 | #define HAVE_CXX11_CONSTEXPR 1 | #define HAVE_CXX11_ALIAS_DECLARATIONS 1 | #define HAVE_CXX11_SHARED_PTR 1 | #define HAVE_CXX11_UNIQUE_PTR 1 | #define HAVE_CXX11_MAKE_UNIQUE_WORKAROUND 1 | #define HAVE_CXX11_OVERRIDE 1 | #define HAVE_CXX11_INITIALIZER_LIST 1 | #define HAVE_CXX11_VARIADIC_TEMPLATES 1 | #define HAVE_CXX11_THREAD 1 | #define HAVE_CXX11_CONDITION_VARIABLE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT_COMPLEX 1 | #define HAVE_CXX11_DELETED_FUNCTIONS 1 | #define HAVE_CXX11_FINAL 1 | #define HAVE_CXX11_NULLPTR 1 | #define HAVE_CXX11_TO_STRING 1 | #define HAVE_CXX11_NOEXCEPT 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MAJOR_VERSION 1 | #define MINOR_VERSION 2 | #define MICRO_VERSION 1 | #define LIB_VERSION "1.2.1" | #define LIB_RELEASE "" | #define CXX "mpicxx" | #define IO_COMPATIBILITY_VERSION "0.7.4" | #define HAVE_NAMESPACES /**/ | #define DEFAULT_DOUBLE_PRECISION 1 | #define DEFAULT_SCALAR_TYPE double | #define restrict __restrict | #define HAVE_GETPWUID 1 | #define ENABLE_EXCEPTIONS 1 | #define ENABLE_TIMESTAMPS 1 | #define SIZEOF_SHORT_INT 2 | #define SIZEOF_INT 4 | #define SIZEOF_UNSIGNED_INT 4 | #define SIZEOF_SIZE_T 8 | #define SIZEOF_LONG_INT 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_VOID_P 8 | #define SIZEOF_FUNCTION_POINTER 8 | #define HAVE_RTTI /**/ | #define HAVE_GETOPT_H 1 | #define HAVE_CSIGNAL 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_LOCALE /**/ | #define HAVE_SSTREAM /**/ | #define HAVE_STRINGSTREAM /**/ | #define HAVE_FENV_H 1 | #define HAVE_XMMINTRIN_H 1 | #define HAVE_FEENABLEEXCEPT 1 | #define HAVE_FEDISABLEEXCEPT 1 | #define HAVE_TR1_UNORDERED_MULTIMAP 1 | #define BEST_UNORDERED_MULTIMAP std::tr1::unordered_multimap | #define INCLUDE_UNORDERED_MULTIMAP | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_TR1_UNORDERED_MAP 1 | #define BEST_UNORDERED_MAP std::tr1::unordered_map | #define INCLUDE_UNORDERED_MAP | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_TR1_UNORDERED_MULTISET 1 | #define BEST_UNORDERED_MULTISET std::tr1::unordered_multiset | #define INCLUDE_UNORDERED_MULTISET | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_TR1_UNORDERED_SET 1 | #define BEST_UNORDERED_SET std::tr1::unordered_set | #define INCLUDE_UNORDERED_SET | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_TR1_HASH 1 | #define BEST_HASH std::tr1::hash | #define INCLUDE_HASH | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_DLOPEN 1 | #define HAVE_GCC_ABI_DEMANGLE 1 | #define HAVE_GLIBC_BACKTRACE 1 | #define GDB_COMMAND "gdb" | #define ENABLE_UNIQUE_PTR 1 | #define ENABLE_WARNINGS 1 | #define DISABLE_COMMWORLD 1 | #define REQUIRE_SEPARATE_NAMESPACE 1 | #define BOUNDARY_ID_BYTES 2 | #define DOF_ID_BYTES 4 | #define PROCESSOR_ID_BYTES 2 | #define SUBDOMAIN_ID_BYTES 2 | #define UNIQUE_ID_BYTES 8 | #define ENABLE_AMR 1 | #define ENABLE_VSMOOTHER 1 | #define ENABLE_PERIODIC 1 | #define ENABLE_DIRICHLET 1 | #define ENABLE_GHOSTED 1 | #define ENABLE_NODE_VALENCE 1 | #define DIM 3 | #define ENABLE_HIGHER_ORDER_SHAPES 1 | #define ENABLE_SECOND_DERIVATIVES 1 | #define HAVE_RPC_RPC_H 1 | #define HAVE_XDR 1 | #define USE_REAL_NUMBERS 1 | #define ENABLE_REFERENCE_COUNTING 1 | #define HAVE_BOOST /**/ | #define HAVE_BOOST_MOVELIB_UNIQUE_PTR 1 | #define DETECTED_PETSC_VERSION_MAJOR 3 | #define DETECTED_PETSC_VERSION_MINOR 10 | #define DETECTED_PETSC_VERSION_SUBMINOR 4 | #define DETECTED_PETSC_VERSION_RELEASE 1 | #define HAVE_MPI 1 | #define HAVE_PETSC 1 | #define HAVE_PETSC_TAO 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #include configure:36817: result: no configure:36817: checking /linux-opt/include/slepcconf.h presence configure:36817: mpicxx -E conftest.cpp conftest.cpp(146): error #2379: cannot open source file "/linux-opt/include/slepcconf.h" #include ^ configure:36817: $? = 2 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "libmesh" | #define PACKAGE_TARNAME "libmesh" | #define PACKAGE_VERSION "1.2.1" | #define PACKAGE_STRING "libmesh 1.2.1" | #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net" | #define PACKAGE_URL "http://libmesh.github.io" | #define CONFIGURE_INFO "../libMesh/configure '--prefix=/home/asbhalla/softwares/libMesh-Git/linux-opt' '--with-methods=opt' 'PETSC_DIR=/home/asbhalla/softwares/PETSc-BitBucket/PETSc' 'PETSC_ARCH=linux-opt' 'CC=mpicc' 'CXX=mpicxx' 'FC=mpif90' 'F77=mpif90' '--with-boost=/home/asbhalla/softwares/boost/1.67.0' '--enable-exodus' '--enable-triangle' '--disable-glibcxx-debugging' '--disable-openmp' '--disable-perflog' '--disable-strict-lgpl' '--disable-pthreads' '--disable-cppthreads' 'LDFLAGS=-L/lib64'" | #define PACKAGE "libmesh" | #define VERSION "1.2.1" | #define HAVE_CXX11 1 | #define HAVE_CXX11_MOVE 1 | #define HAVE_CXX11_RANGEFOR 1 | #define HAVE_CXX11_DECLTYPE 1 | #define HAVE_CXX11_RVALUE_REFERENCES 1 | #define HAVE_CXX11_AUTO 1 | #define HAVE_CXX11_LAMBDA 1 | #define HAVE_CXX11_CONSTEXPR 1 | #define HAVE_CXX11_ALIAS_DECLARATIONS 1 | #define HAVE_CXX11_SHARED_PTR 1 | #define HAVE_CXX11_UNIQUE_PTR 1 | #define HAVE_CXX11_MAKE_UNIQUE_WORKAROUND 1 | #define HAVE_CXX11_OVERRIDE 1 | #define HAVE_CXX11_INITIALIZER_LIST 1 | #define HAVE_CXX11_VARIADIC_TEMPLATES 1 | #define HAVE_CXX11_THREAD 1 | #define HAVE_CXX11_CONDITION_VARIABLE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT_COMPLEX 1 | #define HAVE_CXX11_DELETED_FUNCTIONS 1 | #define HAVE_CXX11_FINAL 1 | #define HAVE_CXX11_NULLPTR 1 | #define HAVE_CXX11_TO_STRING 1 | #define HAVE_CXX11_NOEXCEPT 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MAJOR_VERSION 1 | #define MINOR_VERSION 2 | #define MICRO_VERSION 1 | #define LIB_VERSION "1.2.1" | #define LIB_RELEASE "" | #define CXX "mpicxx" | #define IO_COMPATIBILITY_VERSION "0.7.4" | #define HAVE_NAMESPACES /**/ | #define DEFAULT_DOUBLE_PRECISION 1 | #define DEFAULT_SCALAR_TYPE double | #define restrict __restrict | #define HAVE_GETPWUID 1 | #define ENABLE_EXCEPTIONS 1 | #define ENABLE_TIMESTAMPS 1 | #define SIZEOF_SHORT_INT 2 | #define SIZEOF_INT 4 | #define SIZEOF_UNSIGNED_INT 4 | #define SIZEOF_SIZE_T 8 | #define SIZEOF_LONG_INT 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_VOID_P 8 | #define SIZEOF_FUNCTION_POINTER 8 | #define HAVE_RTTI /**/ | #define HAVE_GETOPT_H 1 | #define HAVE_CSIGNAL 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_LOCALE /**/ | #define HAVE_SSTREAM /**/ | #define HAVE_STRINGSTREAM /**/ | #define HAVE_FENV_H 1 | #define HAVE_XMMINTRIN_H 1 | #define HAVE_FEENABLEEXCEPT 1 | #define HAVE_FEDISABLEEXCEPT 1 | #define HAVE_TR1_UNORDERED_MULTIMAP 1 | #define BEST_UNORDERED_MULTIMAP std::tr1::unordered_multimap | #define INCLUDE_UNORDERED_MULTIMAP | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_TR1_UNORDERED_MAP 1 | #define BEST_UNORDERED_MAP std::tr1::unordered_map | #define INCLUDE_UNORDERED_MAP | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_TR1_UNORDERED_MULTISET 1 | #define BEST_UNORDERED_MULTISET std::tr1::unordered_multiset | #define INCLUDE_UNORDERED_MULTISET | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_TR1_UNORDERED_SET 1 | #define BEST_UNORDERED_SET std::tr1::unordered_set | #define INCLUDE_UNORDERED_SET | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_TR1_HASH 1 | #define BEST_HASH std::tr1::hash | #define INCLUDE_HASH | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_DLOPEN 1 | #define HAVE_GCC_ABI_DEMANGLE 1 | #define HAVE_GLIBC_BACKTRACE 1 | #define GDB_COMMAND "gdb" | #define ENABLE_UNIQUE_PTR 1 | #define ENABLE_WARNINGS 1 | #define DISABLE_COMMWORLD 1 | #define REQUIRE_SEPARATE_NAMESPACE 1 | #define BOUNDARY_ID_BYTES 2 | #define DOF_ID_BYTES 4 | #define PROCESSOR_ID_BYTES 2 | #define SUBDOMAIN_ID_BYTES 2 | #define UNIQUE_ID_BYTES 8 | #define ENABLE_AMR 1 | #define ENABLE_VSMOOTHER 1 | #define ENABLE_PERIODIC 1 | #define ENABLE_DIRICHLET 1 | #define ENABLE_GHOSTED 1 | #define ENABLE_NODE_VALENCE 1 | #define DIM 3 | #define ENABLE_HIGHER_ORDER_SHAPES 1 | #define ENABLE_SECOND_DERIVATIVES 1 | #define HAVE_RPC_RPC_H 1 | #define HAVE_XDR 1 | #define USE_REAL_NUMBERS 1 | #define ENABLE_REFERENCE_COUNTING 1 | #define HAVE_BOOST /**/ | #define HAVE_BOOST_MOVELIB_UNIQUE_PTR 1 | #define DETECTED_PETSC_VERSION_MAJOR 3 | #define DETECTED_PETSC_VERSION_MINOR 10 | #define DETECTED_PETSC_VERSION_SUBMINOR 4 | #define DETECTED_PETSC_VERSION_RELEASE 1 | #define HAVE_MPI 1 | #define HAVE_PETSC 1 | #define HAVE_PETSC_TAO 1 | /* end confdefs.h. */ | #include configure:36817: result: no configure:36817: checking for /linux-opt/include/slepcconf.h configure:36817: result: no configure:37018: checking Whether MPI is available for Trilinos configure:37025: result: yes configure:37029: checking Whether Real precision is compatible with Trilinos configure:37041: result: yes configure:37750: result: <<< User requested thread model: auto >>> configure:37800: checking /usr/include/tbb/task_scheduler_init.h usability configure:37800: mpicxx -c -std=gnu++11 conftest.cpp >&5 conftest.cpp(179): catastrophic error: cannot open source file "/usr/include/tbb/task_scheduler_init.h" #include ^ compilation aborted for conftest.cpp (code 4) configure:37800: $? = 4 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "libmesh" | #define PACKAGE_TARNAME "libmesh" | #define PACKAGE_VERSION "1.2.1" | #define PACKAGE_STRING "libmesh 1.2.1" | #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net" | #define PACKAGE_URL "http://libmesh.github.io" | #define CONFIGURE_INFO "../libMesh/configure '--prefix=/home/asbhalla/softwares/libMesh-Git/linux-opt' '--with-methods=opt' 'PETSC_DIR=/home/asbhalla/softwares/PETSc-BitBucket/PETSc' 'PETSC_ARCH=linux-opt' 'CC=mpicc' 'CXX=mpicxx' 'FC=mpif90' 'F77=mpif90' '--with-boost=/home/asbhalla/softwares/boost/1.67.0' '--enable-exodus' '--enable-triangle' '--disable-glibcxx-debugging' '--disable-openmp' '--disable-perflog' '--disable-strict-lgpl' '--disable-pthreads' '--disable-cppthreads' 'LDFLAGS=-L/lib64'" | #define PACKAGE "libmesh" | #define VERSION "1.2.1" | #define HAVE_CXX11 1 | #define HAVE_CXX11_MOVE 1 | #define HAVE_CXX11_RANGEFOR 1 | #define HAVE_CXX11_DECLTYPE 1 | #define HAVE_CXX11_RVALUE_REFERENCES 1 | #define HAVE_CXX11_AUTO 1 | #define HAVE_CXX11_LAMBDA 1 | #define HAVE_CXX11_CONSTEXPR 1 | #define HAVE_CXX11_ALIAS_DECLARATIONS 1 | #define HAVE_CXX11_SHARED_PTR 1 | #define HAVE_CXX11_UNIQUE_PTR 1 | #define HAVE_CXX11_MAKE_UNIQUE_WORKAROUND 1 | #define HAVE_CXX11_OVERRIDE 1 | #define HAVE_CXX11_INITIALIZER_LIST 1 | #define HAVE_CXX11_VARIADIC_TEMPLATES 1 | #define HAVE_CXX11_THREAD 1 | #define HAVE_CXX11_CONDITION_VARIABLE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT_COMPLEX 1 | #define HAVE_CXX11_DELETED_FUNCTIONS 1 | #define HAVE_CXX11_FINAL 1 | #define HAVE_CXX11_NULLPTR 1 | #define HAVE_CXX11_TO_STRING 1 | #define HAVE_CXX11_NOEXCEPT 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MAJOR_VERSION 1 | #define MINOR_VERSION 2 | #define MICRO_VERSION 1 | #define LIB_VERSION "1.2.1" | #define LIB_RELEASE "" | #define CXX "mpicxx" | #define IO_COMPATIBILITY_VERSION "0.7.4" | #define HAVE_NAMESPACES /**/ | #define DEFAULT_DOUBLE_PRECISION 1 | #define DEFAULT_SCALAR_TYPE double | #define restrict __restrict | #define HAVE_GETPWUID 1 | #define ENABLE_EXCEPTIONS 1 | #define ENABLE_TIMESTAMPS 1 | #define SIZEOF_SHORT_INT 2 | #define SIZEOF_INT 4 | #define SIZEOF_UNSIGNED_INT 4 | #define SIZEOF_SIZE_T 8 | #define SIZEOF_LONG_INT 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_VOID_P 8 | #define SIZEOF_FUNCTION_POINTER 8 | #define HAVE_RTTI /**/ | #define HAVE_GETOPT_H 1 | #define HAVE_CSIGNAL 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_LOCALE /**/ | #define HAVE_SSTREAM /**/ | #define HAVE_STRINGSTREAM /**/ | #define HAVE_FENV_H 1 | #define HAVE_XMMINTRIN_H 1 | #define HAVE_FEENABLEEXCEPT 1 | #define HAVE_FEDISABLEEXCEPT 1 | #define HAVE_TR1_UNORDERED_MULTIMAP 1 | #define BEST_UNORDERED_MULTIMAP std::tr1::unordered_multimap | #define INCLUDE_UNORDERED_MULTIMAP | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_TR1_UNORDERED_MAP 1 | #define BEST_UNORDERED_MAP std::tr1::unordered_map | #define INCLUDE_UNORDERED_MAP | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_TR1_UNORDERED_MULTISET 1 | #define BEST_UNORDERED_MULTISET std::tr1::unordered_multiset | #define INCLUDE_UNORDERED_MULTISET | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_TR1_UNORDERED_SET 1 | #define BEST_UNORDERED_SET std::tr1::unordered_set | #define INCLUDE_UNORDERED_SET | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_TR1_HASH 1 | #define BEST_HASH std::tr1::hash | #define INCLUDE_HASH | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_DLOPEN 1 | #define HAVE_GCC_ABI_DEMANGLE 1 | #define HAVE_GLIBC_BACKTRACE 1 | #define GDB_COMMAND "gdb" | #define ENABLE_UNIQUE_PTR 1 | #define ENABLE_WARNINGS 1 | #define DISABLE_COMMWORLD 1 | #define REQUIRE_SEPARATE_NAMESPACE 1 | #define BOUNDARY_ID_BYTES 2 | #define DOF_ID_BYTES 4 | #define PROCESSOR_ID_BYTES 2 | #define SUBDOMAIN_ID_BYTES 2 | #define UNIQUE_ID_BYTES 8 | #define ENABLE_AMR 1 | #define ENABLE_VSMOOTHER 1 | #define ENABLE_PERIODIC 1 | #define ENABLE_DIRICHLET 1 | #define ENABLE_GHOSTED 1 | #define ENABLE_NODE_VALENCE 1 | #define DIM 3 | #define ENABLE_HIGHER_ORDER_SHAPES 1 | #define ENABLE_SECOND_DERIVATIVES 1 | #define HAVE_RPC_RPC_H 1 | #define HAVE_XDR 1 | #define USE_REAL_NUMBERS 1 | #define ENABLE_REFERENCE_COUNTING 1 | #define HAVE_BOOST /**/ | #define HAVE_BOOST_MOVELIB_UNIQUE_PTR 1 | #define DETECTED_PETSC_VERSION_MAJOR 3 | #define DETECTED_PETSC_VERSION_MINOR 10 | #define DETECTED_PETSC_VERSION_SUBMINOR 4 | #define DETECTED_PETSC_VERSION_RELEASE 1 | #define HAVE_MPI 1 | #define HAVE_PETSC 1 | #define HAVE_PETSC_TAO 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #include configure:37800: result: no configure:37800: checking /usr/include/tbb/task_scheduler_init.h presence configure:37800: mpicxx -E conftest.cpp conftest.cpp(146): error #2379: cannot open source file "/usr/include/tbb/task_scheduler_init.h" #include ^ configure:37800: $? = 2 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "libmesh" | #define PACKAGE_TARNAME "libmesh" | #define PACKAGE_VERSION "1.2.1" | #define PACKAGE_STRING "libmesh 1.2.1" | #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net" | #define PACKAGE_URL "http://libmesh.github.io" | #define CONFIGURE_INFO "../libMesh/configure '--prefix=/home/asbhalla/softwares/libMesh-Git/linux-opt' '--with-methods=opt' 'PETSC_DIR=/home/asbhalla/softwares/PETSc-BitBucket/PETSc' 'PETSC_ARCH=linux-opt' 'CC=mpicc' 'CXX=mpicxx' 'FC=mpif90' 'F77=mpif90' '--with-boost=/home/asbhalla/softwares/boost/1.67.0' '--enable-exodus' '--enable-triangle' '--disable-glibcxx-debugging' '--disable-openmp' '--disable-perflog' '--disable-strict-lgpl' '--disable-pthreads' '--disable-cppthreads' 'LDFLAGS=-L/lib64'" | #define PACKAGE "libmesh" | #define VERSION "1.2.1" | #define HAVE_CXX11 1 | #define HAVE_CXX11_MOVE 1 | #define HAVE_CXX11_RANGEFOR 1 | #define HAVE_CXX11_DECLTYPE 1 | #define HAVE_CXX11_RVALUE_REFERENCES 1 | #define HAVE_CXX11_AUTO 1 | #define HAVE_CXX11_LAMBDA 1 | #define HAVE_CXX11_CONSTEXPR 1 | #define HAVE_CXX11_ALIAS_DECLARATIONS 1 | #define HAVE_CXX11_SHARED_PTR 1 | #define HAVE_CXX11_UNIQUE_PTR 1 | #define HAVE_CXX11_MAKE_UNIQUE_WORKAROUND 1 | #define HAVE_CXX11_OVERRIDE 1 | #define HAVE_CXX11_INITIALIZER_LIST 1 | #define HAVE_CXX11_VARIADIC_TEMPLATES 1 | #define HAVE_CXX11_THREAD 1 | #define HAVE_CXX11_CONDITION_VARIABLE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT_COMPLEX 1 | #define HAVE_CXX11_DELETED_FUNCTIONS 1 | #define HAVE_CXX11_FINAL 1 | #define HAVE_CXX11_NULLPTR 1 | #define HAVE_CXX11_TO_STRING 1 | #define HAVE_CXX11_NOEXCEPT 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MAJOR_VERSION 1 | #define MINOR_VERSION 2 | #define MICRO_VERSION 1 | #define LIB_VERSION "1.2.1" | #define LIB_RELEASE "" | #define CXX "mpicxx" | #define IO_COMPATIBILITY_VERSION "0.7.4" | #define HAVE_NAMESPACES /**/ | #define DEFAULT_DOUBLE_PRECISION 1 | #define DEFAULT_SCALAR_TYPE double | #define restrict __restrict | #define HAVE_GETPWUID 1 | #define ENABLE_EXCEPTIONS 1 | #define ENABLE_TIMESTAMPS 1 | #define SIZEOF_SHORT_INT 2 | #define SIZEOF_INT 4 | #define SIZEOF_UNSIGNED_INT 4 | #define SIZEOF_SIZE_T 8 | #define SIZEOF_LONG_INT 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_VOID_P 8 | #define SIZEOF_FUNCTION_POINTER 8 | #define HAVE_RTTI /**/ | #define HAVE_GETOPT_H 1 | #define HAVE_CSIGNAL 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_LOCALE /**/ | #define HAVE_SSTREAM /**/ | #define HAVE_STRINGSTREAM /**/ | #define HAVE_FENV_H 1 | #define HAVE_XMMINTRIN_H 1 | #define HAVE_FEENABLEEXCEPT 1 | #define HAVE_FEDISABLEEXCEPT 1 | #define HAVE_TR1_UNORDERED_MULTIMAP 1 | #define BEST_UNORDERED_MULTIMAP std::tr1::unordered_multimap | #define INCLUDE_UNORDERED_MULTIMAP | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_TR1_UNORDERED_MAP 1 | #define BEST_UNORDERED_MAP std::tr1::unordered_map | #define INCLUDE_UNORDERED_MAP | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_TR1_UNORDERED_MULTISET 1 | #define BEST_UNORDERED_MULTISET std::tr1::unordered_multiset | #define INCLUDE_UNORDERED_MULTISET | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_TR1_UNORDERED_SET 1 | #define BEST_UNORDERED_SET std::tr1::unordered_set | #define INCLUDE_UNORDERED_SET | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_TR1_HASH 1 | #define BEST_HASH std::tr1::hash | #define INCLUDE_HASH | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_DLOPEN 1 | #define HAVE_GCC_ABI_DEMANGLE 1 | #define HAVE_GLIBC_BACKTRACE 1 | #define GDB_COMMAND "gdb" | #define ENABLE_UNIQUE_PTR 1 | #define ENABLE_WARNINGS 1 | #define DISABLE_COMMWORLD 1 | #define REQUIRE_SEPARATE_NAMESPACE 1 | #define BOUNDARY_ID_BYTES 2 | #define DOF_ID_BYTES 4 | #define PROCESSOR_ID_BYTES 2 | #define SUBDOMAIN_ID_BYTES 2 | #define UNIQUE_ID_BYTES 8 | #define ENABLE_AMR 1 | #define ENABLE_VSMOOTHER 1 | #define ENABLE_PERIODIC 1 | #define ENABLE_DIRICHLET 1 | #define ENABLE_GHOSTED 1 | #define ENABLE_NODE_VALENCE 1 | #define DIM 3 | #define ENABLE_HIGHER_ORDER_SHAPES 1 | #define ENABLE_SECOND_DERIVATIVES 1 | #define HAVE_RPC_RPC_H 1 | #define HAVE_XDR 1 | #define USE_REAL_NUMBERS 1 | #define ENABLE_REFERENCE_COUNTING 1 | #define HAVE_BOOST /**/ | #define HAVE_BOOST_MOVELIB_UNIQUE_PTR 1 | #define DETECTED_PETSC_VERSION_MAJOR 3 | #define DETECTED_PETSC_VERSION_MINOR 10 | #define DETECTED_PETSC_VERSION_SUBMINOR 4 | #define DETECTED_PETSC_VERSION_RELEASE 1 | #define HAVE_MPI 1 | #define HAVE_PETSC 1 | #define HAVE_PETSC_TAO 1 | /* end confdefs.h. */ | #include configure:37800: result: no configure:37800: checking for /usr/include/tbb/task_scheduler_init.h configure:37800: result: no configure:38552: result: <<< Found thread model: none >>> configure:38586: result: <<< Configuring library with Laspack support >>> configure:38644: result: <<< Configuring library with SFC support >>> configure:38694: checking zlib.h usability configure:38694: mpicxx -c -std=gnu++11 conftest.cpp >&5 configure:38694: $? = 0 configure:38694: result: yes configure:38694: checking zlib.h presence configure:38694: mpicxx -E conftest.cpp configure:38694: $? = 0 configure:38694: result: yes configure:38694: checking for zlib.h configure:38694: result: yes configure:38704: checking for gzopen in -lz configure:38729: mpicxx -o conftest -std=gnu++11 -L/lib64 conftest.cpp -lz >&5 configure:38729: $? = 0 configure:38738: result: yes configure:38757: result: <<< Configuring library with gzstreams support >>> configure:38801: checking for bzip2 configure:38817: found /usr/bin/bzip2 configure:38829: result: bzip2 configure:38840: checking for bunzip2 configure:38856: found /usr/bin/bunzip2 configure:38868: result: bunzip2 configure:38877: result: <<< Using bzip2/bunzip2 for writing/reading compressed .bz2 files >>> configure:38903: checking for xz configure:38919: found /usr/bin/xz configure:38931: result: xz configure:38940: result: <<< Using xz for writing/reading compressed .xz files >>> configure:38999: result: <<< Testing X11 headers with -I/usr/include >>> configure:39010: checking X11/Intrinsic.h usability configure:39010: mpicxx -c -std=gnu++11 -I/usr/include conftest.cpp >&5 configure:39010: $? = 0 configure:39010: result: yes configure:39010: checking X11/Intrinsic.h presence configure:39010: mpicxx -E -I/usr/include conftest.cpp configure:39010: $? = 0 configure:39010: result: yes configure:39010: checking for X11/Intrinsic.h configure:39010: result: yes configure:39035: checking size of void * configure:39054: result: 8 configure:39087: result: <<< Configuring library with Tecplot TecIO support >>> configure:39337: result: <<< Configuring library with Metis support >>> configure:39341: checking for thread local storage (TLS) class configure:39368: mpicxx -c -std=gnu++11 conftest.cpp >&5 configure:39368: $? = 0 configure:39388: result: __thread configure:39453: result: <<< Configuring library with Parmetis support >>> configure:39486: checking for doxygen configure:39504: found /usr/bin/doxygen configure:39516: result: /usr/bin/doxygen configure:39531: checking for dot configure:39564: result: no configure:39609: result: <<< Configuring library with Tetgen support >>> configure:39666: result: <<< Configuring library with Triangle support >>> configure:39719: checking for library containing sqrt configure:39750: mpicxx -o conftest -std=gnu++11 -L/lib64 conftest.cpp >&5 configure:39750: $? = 0 configure:39767: result: none required configure:39775: checking for library containing trunc configure:39806: mpicxx -o conftest -std=gnu++11 -L/lib64 conftest.cpp >&5 configure:39806: $? = 0 configure:39823: result: none required configure:39831: checking for library containing cos configure:39862: mpicxx -o conftest -std=gnu++11 -L/lib64 conftest.cpp >&5 configure:39862: $? = 0 configure:39879: result: none required configure:39895: result: <<< Configuring library with Qhull version 2012.1 support >>> configure:39940: result: <<< Configuring library with GMV support >>> configure:40052: checking /vtkConfigure.h usability configure:40052: mpicxx -c -std=gnu++11 conftest.cpp >&5 conftest.cpp(195): catastrophic error: cannot open source file "/vtkConfigure.h" #include ^ compilation aborted for conftest.cpp (code 4) configure:40052: $? = 4 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "libmesh" | #define PACKAGE_TARNAME "libmesh" | #define PACKAGE_VERSION "1.2.1" | #define PACKAGE_STRING "libmesh 1.2.1" | #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net" | #define PACKAGE_URL "http://libmesh.github.io" | #define CONFIGURE_INFO "../libMesh/configure '--prefix=/home/asbhalla/softwares/libMesh-Git/linux-opt' '--with-methods=opt' 'PETSC_DIR=/home/asbhalla/softwares/PETSc-BitBucket/PETSc' 'PETSC_ARCH=linux-opt' 'CC=mpicc' 'CXX=mpicxx' 'FC=mpif90' 'F77=mpif90' '--with-boost=/home/asbhalla/softwares/boost/1.67.0' '--enable-exodus' '--enable-triangle' '--disable-glibcxx-debugging' '--disable-openmp' '--disable-perflog' '--disable-strict-lgpl' '--disable-pthreads' '--disable-cppthreads' 'LDFLAGS=-L/lib64'" | #define PACKAGE "libmesh" | #define VERSION "1.2.1" | #define HAVE_CXX11 1 | #define HAVE_CXX11_MOVE 1 | #define HAVE_CXX11_RANGEFOR 1 | #define HAVE_CXX11_DECLTYPE 1 | #define HAVE_CXX11_RVALUE_REFERENCES 1 | #define HAVE_CXX11_AUTO 1 | #define HAVE_CXX11_LAMBDA 1 | #define HAVE_CXX11_CONSTEXPR 1 | #define HAVE_CXX11_ALIAS_DECLARATIONS 1 | #define HAVE_CXX11_SHARED_PTR 1 | #define HAVE_CXX11_UNIQUE_PTR 1 | #define HAVE_CXX11_MAKE_UNIQUE_WORKAROUND 1 | #define HAVE_CXX11_OVERRIDE 1 | #define HAVE_CXX11_INITIALIZER_LIST 1 | #define HAVE_CXX11_VARIADIC_TEMPLATES 1 | #define HAVE_CXX11_THREAD 1 | #define HAVE_CXX11_CONDITION_VARIABLE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT_COMPLEX 1 | #define HAVE_CXX11_DELETED_FUNCTIONS 1 | #define HAVE_CXX11_FINAL 1 | #define HAVE_CXX11_NULLPTR 1 | #define HAVE_CXX11_TO_STRING 1 | #define HAVE_CXX11_NOEXCEPT 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MAJOR_VERSION 1 | #define MINOR_VERSION 2 | #define MICRO_VERSION 1 | #define LIB_VERSION "1.2.1" | #define LIB_RELEASE "" | #define CXX "mpicxx" | #define IO_COMPATIBILITY_VERSION "0.7.4" | #define HAVE_NAMESPACES /**/ | #define DEFAULT_DOUBLE_PRECISION 1 | #define DEFAULT_SCALAR_TYPE double | #define restrict __restrict | #define HAVE_GETPWUID 1 | #define ENABLE_EXCEPTIONS 1 | #define ENABLE_TIMESTAMPS 1 | #define SIZEOF_SHORT_INT 2 | #define SIZEOF_INT 4 | #define SIZEOF_UNSIGNED_INT 4 | #define SIZEOF_SIZE_T 8 | #define SIZEOF_LONG_INT 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_VOID_P 8 | #define SIZEOF_FUNCTION_POINTER 8 | #define HAVE_RTTI /**/ | #define HAVE_GETOPT_H 1 | #define HAVE_CSIGNAL 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_LOCALE /**/ | #define HAVE_SSTREAM /**/ | #define HAVE_STRINGSTREAM /**/ | #define HAVE_FENV_H 1 | #define HAVE_XMMINTRIN_H 1 | #define HAVE_FEENABLEEXCEPT 1 | #define HAVE_FEDISABLEEXCEPT 1 | #define HAVE_TR1_UNORDERED_MULTIMAP 1 | #define BEST_UNORDERED_MULTIMAP std::tr1::unordered_multimap | #define INCLUDE_UNORDERED_MULTIMAP | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_TR1_UNORDERED_MAP 1 | #define BEST_UNORDERED_MAP std::tr1::unordered_map | #define INCLUDE_UNORDERED_MAP | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_TR1_UNORDERED_MULTISET 1 | #define BEST_UNORDERED_MULTISET std::tr1::unordered_multiset | #define INCLUDE_UNORDERED_MULTISET | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_TR1_UNORDERED_SET 1 | #define BEST_UNORDERED_SET std::tr1::unordered_set | #define INCLUDE_UNORDERED_SET | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_TR1_HASH 1 | #define BEST_HASH std::tr1::hash | #define INCLUDE_HASH | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_DLOPEN 1 | #define HAVE_GCC_ABI_DEMANGLE 1 | #define HAVE_GLIBC_BACKTRACE 1 | #define GDB_COMMAND "gdb" | #define ENABLE_UNIQUE_PTR 1 | #define ENABLE_WARNINGS 1 | #define DISABLE_COMMWORLD 1 | #define REQUIRE_SEPARATE_NAMESPACE 1 | #define BOUNDARY_ID_BYTES 2 | #define DOF_ID_BYTES 4 | #define PROCESSOR_ID_BYTES 2 | #define SUBDOMAIN_ID_BYTES 2 | #define UNIQUE_ID_BYTES 8 | #define ENABLE_AMR 1 | #define ENABLE_VSMOOTHER 1 | #define ENABLE_PERIODIC 1 | #define ENABLE_DIRICHLET 1 | #define ENABLE_GHOSTED 1 | #define ENABLE_NODE_VALENCE 1 | #define DIM 3 | #define ENABLE_HIGHER_ORDER_SHAPES 1 | #define ENABLE_SECOND_DERIVATIVES 1 | #define HAVE_RPC_RPC_H 1 | #define HAVE_XDR 1 | #define USE_REAL_NUMBERS 1 | #define ENABLE_REFERENCE_COUNTING 1 | #define HAVE_BOOST /**/ | #define HAVE_BOOST_MOVELIB_UNIQUE_PTR 1 | #define DETECTED_PETSC_VERSION_MAJOR 3 | #define DETECTED_PETSC_VERSION_MINOR 10 | #define DETECTED_PETSC_VERSION_SUBMINOR 4 | #define DETECTED_PETSC_VERSION_RELEASE 1 | #define HAVE_MPI 1 | #define HAVE_PETSC 1 | #define HAVE_PETSC_TAO 1 | #define HAVE_LASPACK 1 | #define HAVE_SFCURVES 1 | #define HAVE_ZLIB_H 1 | #define HAVE_GZSTREAM 1 | #define HAVE_BZIP 1 | #define HAVE_XZ 1 | #define SIZEOF_VOID_P 8 | #define HAVE_TECPLOT_API 1 | #define HAVE_TECPLOT_API_112 1 | #define HAVE_METIS 1 | #define TLS __thread | #define HAVE_PARMETIS 1 | #define HAVE_TETGEN 1 | #define HAVE_TRIANGLE 1 | #define HAVE_QHULL_API 1 | #define HAVE_GMV 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #include configure:40052: result: no configure:40052: checking /vtkConfigure.h presence configure:40052: mpicxx -E conftest.cpp conftest.cpp(162): error #2379: cannot open source file "/vtkConfigure.h" #include ^ configure:40052: $? = 2 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "libmesh" | #define PACKAGE_TARNAME "libmesh" | #define PACKAGE_VERSION "1.2.1" | #define PACKAGE_STRING "libmesh 1.2.1" | #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net" | #define PACKAGE_URL "http://libmesh.github.io" | #define CONFIGURE_INFO "../libMesh/configure '--prefix=/home/asbhalla/softwares/libMesh-Git/linux-opt' '--with-methods=opt' 'PETSC_DIR=/home/asbhalla/softwares/PETSc-BitBucket/PETSc' 'PETSC_ARCH=linux-opt' 'CC=mpicc' 'CXX=mpicxx' 'FC=mpif90' 'F77=mpif90' '--with-boost=/home/asbhalla/softwares/boost/1.67.0' '--enable-exodus' '--enable-triangle' '--disable-glibcxx-debugging' '--disable-openmp' '--disable-perflog' '--disable-strict-lgpl' '--disable-pthreads' '--disable-cppthreads' 'LDFLAGS=-L/lib64'" | #define PACKAGE "libmesh" | #define VERSION "1.2.1" | #define HAVE_CXX11 1 | #define HAVE_CXX11_MOVE 1 | #define HAVE_CXX11_RANGEFOR 1 | #define HAVE_CXX11_DECLTYPE 1 | #define HAVE_CXX11_RVALUE_REFERENCES 1 | #define HAVE_CXX11_AUTO 1 | #define HAVE_CXX11_LAMBDA 1 | #define HAVE_CXX11_CONSTEXPR 1 | #define HAVE_CXX11_ALIAS_DECLARATIONS 1 | #define HAVE_CXX11_SHARED_PTR 1 | #define HAVE_CXX11_UNIQUE_PTR 1 | #define HAVE_CXX11_MAKE_UNIQUE_WORKAROUND 1 | #define HAVE_CXX11_OVERRIDE 1 | #define HAVE_CXX11_INITIALIZER_LIST 1 | #define HAVE_CXX11_VARIADIC_TEMPLATES 1 | #define HAVE_CXX11_THREAD 1 | #define HAVE_CXX11_CONDITION_VARIABLE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT_COMPLEX 1 | #define HAVE_CXX11_DELETED_FUNCTIONS 1 | #define HAVE_CXX11_FINAL 1 | #define HAVE_CXX11_NULLPTR 1 | #define HAVE_CXX11_TO_STRING 1 | #define HAVE_CXX11_NOEXCEPT 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MAJOR_VERSION 1 | #define MINOR_VERSION 2 | #define MICRO_VERSION 1 | #define LIB_VERSION "1.2.1" | #define LIB_RELEASE "" | #define CXX "mpicxx" | #define IO_COMPATIBILITY_VERSION "0.7.4" | #define HAVE_NAMESPACES /**/ | #define DEFAULT_DOUBLE_PRECISION 1 | #define DEFAULT_SCALAR_TYPE double | #define restrict __restrict | #define HAVE_GETPWUID 1 | #define ENABLE_EXCEPTIONS 1 | #define ENABLE_TIMESTAMPS 1 | #define SIZEOF_SHORT_INT 2 | #define SIZEOF_INT 4 | #define SIZEOF_UNSIGNED_INT 4 | #define SIZEOF_SIZE_T 8 | #define SIZEOF_LONG_INT 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_VOID_P 8 | #define SIZEOF_FUNCTION_POINTER 8 | #define HAVE_RTTI /**/ | #define HAVE_GETOPT_H 1 | #define HAVE_CSIGNAL 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_LOCALE /**/ | #define HAVE_SSTREAM /**/ | #define HAVE_STRINGSTREAM /**/ | #define HAVE_FENV_H 1 | #define HAVE_XMMINTRIN_H 1 | #define HAVE_FEENABLEEXCEPT 1 | #define HAVE_FEDISABLEEXCEPT 1 | #define HAVE_TR1_UNORDERED_MULTIMAP 1 | #define BEST_UNORDERED_MULTIMAP std::tr1::unordered_multimap | #define INCLUDE_UNORDERED_MULTIMAP | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_TR1_UNORDERED_MAP 1 | #define BEST_UNORDERED_MAP std::tr1::unordered_map | #define INCLUDE_UNORDERED_MAP | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_TR1_UNORDERED_MULTISET 1 | #define BEST_UNORDERED_MULTISET std::tr1::unordered_multiset | #define INCLUDE_UNORDERED_MULTISET | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_TR1_UNORDERED_SET 1 | #define BEST_UNORDERED_SET std::tr1::unordered_set | #define INCLUDE_UNORDERED_SET | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_TR1_HASH 1 | #define BEST_HASH std::tr1::hash | #define INCLUDE_HASH | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_DLOPEN 1 | #define HAVE_GCC_ABI_DEMANGLE 1 | #define HAVE_GLIBC_BACKTRACE 1 | #define GDB_COMMAND "gdb" | #define ENABLE_UNIQUE_PTR 1 | #define ENABLE_WARNINGS 1 | #define DISABLE_COMMWORLD 1 | #define REQUIRE_SEPARATE_NAMESPACE 1 | #define BOUNDARY_ID_BYTES 2 | #define DOF_ID_BYTES 4 | #define PROCESSOR_ID_BYTES 2 | #define SUBDOMAIN_ID_BYTES 2 | #define UNIQUE_ID_BYTES 8 | #define ENABLE_AMR 1 | #define ENABLE_VSMOOTHER 1 | #define ENABLE_PERIODIC 1 | #define ENABLE_DIRICHLET 1 | #define ENABLE_GHOSTED 1 | #define ENABLE_NODE_VALENCE 1 | #define DIM 3 | #define ENABLE_HIGHER_ORDER_SHAPES 1 | #define ENABLE_SECOND_DERIVATIVES 1 | #define HAVE_RPC_RPC_H 1 | #define HAVE_XDR 1 | #define USE_REAL_NUMBERS 1 | #define ENABLE_REFERENCE_COUNTING 1 | #define HAVE_BOOST /**/ | #define HAVE_BOOST_MOVELIB_UNIQUE_PTR 1 | #define DETECTED_PETSC_VERSION_MAJOR 3 | #define DETECTED_PETSC_VERSION_MINOR 10 | #define DETECTED_PETSC_VERSION_SUBMINOR 4 | #define DETECTED_PETSC_VERSION_RELEASE 1 | #define HAVE_MPI 1 | #define HAVE_PETSC 1 | #define HAVE_PETSC_TAO 1 | #define HAVE_LASPACK 1 | #define HAVE_SFCURVES 1 | #define HAVE_ZLIB_H 1 | #define HAVE_GZSTREAM 1 | #define HAVE_BZIP 1 | #define HAVE_XZ 1 | #define SIZEOF_VOID_P 8 | #define HAVE_TECPLOT_API 1 | #define HAVE_TECPLOT_API_112 1 | #define HAVE_METIS 1 | #define TLS __thread | #define HAVE_PARMETIS 1 | #define HAVE_TETGEN 1 | #define HAVE_TRIANGLE 1 | #define HAVE_QHULL_API 1 | #define HAVE_GMV 1 | /* end confdefs.h. */ | #include configure:40052: result: no configure:40052: checking for /vtkConfigure.h configure:40052: result: no configure:40064: result: VTK header files not found! configure:40312: result: <<< Configuring library without VTK support >>> configure:40417: checking /usr/include/Eigen/Eigen usability configure:40417: mpicxx -c -std=gnu++11 conftest.cpp >&5 conftest.cpp(195): catastrophic error: cannot open source file "/usr/include/Eigen/Eigen" #include ^ compilation aborted for conftest.cpp (code 4) configure:40417: $? = 4 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "libmesh" | #define PACKAGE_TARNAME "libmesh" | #define PACKAGE_VERSION "1.2.1" | #define PACKAGE_STRING "libmesh 1.2.1" | #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net" | #define PACKAGE_URL "http://libmesh.github.io" | #define CONFIGURE_INFO "../libMesh/configure '--prefix=/home/asbhalla/softwares/libMesh-Git/linux-opt' '--with-methods=opt' 'PETSC_DIR=/home/asbhalla/softwares/PETSc-BitBucket/PETSc' 'PETSC_ARCH=linux-opt' 'CC=mpicc' 'CXX=mpicxx' 'FC=mpif90' 'F77=mpif90' '--with-boost=/home/asbhalla/softwares/boost/1.67.0' '--enable-exodus' '--enable-triangle' '--disable-glibcxx-debugging' '--disable-openmp' '--disable-perflog' '--disable-strict-lgpl' '--disable-pthreads' '--disable-cppthreads' 'LDFLAGS=-L/lib64'" | #define PACKAGE "libmesh" | #define VERSION "1.2.1" | #define HAVE_CXX11 1 | #define HAVE_CXX11_MOVE 1 | #define HAVE_CXX11_RANGEFOR 1 | #define HAVE_CXX11_DECLTYPE 1 | #define HAVE_CXX11_RVALUE_REFERENCES 1 | #define HAVE_CXX11_AUTO 1 | #define HAVE_CXX11_LAMBDA 1 | #define HAVE_CXX11_CONSTEXPR 1 | #define HAVE_CXX11_ALIAS_DECLARATIONS 1 | #define HAVE_CXX11_SHARED_PTR 1 | #define HAVE_CXX11_UNIQUE_PTR 1 | #define HAVE_CXX11_MAKE_UNIQUE_WORKAROUND 1 | #define HAVE_CXX11_OVERRIDE 1 | #define HAVE_CXX11_INITIALIZER_LIST 1 | #define HAVE_CXX11_VARIADIC_TEMPLATES 1 | #define HAVE_CXX11_THREAD 1 | #define HAVE_CXX11_CONDITION_VARIABLE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT_COMPLEX 1 | #define HAVE_CXX11_DELETED_FUNCTIONS 1 | #define HAVE_CXX11_FINAL 1 | #define HAVE_CXX11_NULLPTR 1 | #define HAVE_CXX11_TO_STRING 1 | #define HAVE_CXX11_NOEXCEPT 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MAJOR_VERSION 1 | #define MINOR_VERSION 2 | #define MICRO_VERSION 1 | #define LIB_VERSION "1.2.1" | #define LIB_RELEASE "" | #define CXX "mpicxx" | #define IO_COMPATIBILITY_VERSION "0.7.4" | #define HAVE_NAMESPACES /**/ | #define DEFAULT_DOUBLE_PRECISION 1 | #define DEFAULT_SCALAR_TYPE double | #define restrict __restrict | #define HAVE_GETPWUID 1 | #define ENABLE_EXCEPTIONS 1 | #define ENABLE_TIMESTAMPS 1 | #define SIZEOF_SHORT_INT 2 | #define SIZEOF_INT 4 | #define SIZEOF_UNSIGNED_INT 4 | #define SIZEOF_SIZE_T 8 | #define SIZEOF_LONG_INT 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_VOID_P 8 | #define SIZEOF_FUNCTION_POINTER 8 | #define HAVE_RTTI /**/ | #define HAVE_GETOPT_H 1 | #define HAVE_CSIGNAL 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_LOCALE /**/ | #define HAVE_SSTREAM /**/ | #define HAVE_STRINGSTREAM /**/ | #define HAVE_FENV_H 1 | #define HAVE_XMMINTRIN_H 1 | #define HAVE_FEENABLEEXCEPT 1 | #define HAVE_FEDISABLEEXCEPT 1 | #define HAVE_TR1_UNORDERED_MULTIMAP 1 | #define BEST_UNORDERED_MULTIMAP std::tr1::unordered_multimap | #define INCLUDE_UNORDERED_MULTIMAP | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_TR1_UNORDERED_MAP 1 | #define BEST_UNORDERED_MAP std::tr1::unordered_map | #define INCLUDE_UNORDERED_MAP | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_TR1_UNORDERED_MULTISET 1 | #define BEST_UNORDERED_MULTISET std::tr1::unordered_multiset | #define INCLUDE_UNORDERED_MULTISET | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_TR1_UNORDERED_SET 1 | #define BEST_UNORDERED_SET std::tr1::unordered_set | #define INCLUDE_UNORDERED_SET | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_TR1_HASH 1 | #define BEST_HASH std::tr1::hash | #define INCLUDE_HASH | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_DLOPEN 1 | #define HAVE_GCC_ABI_DEMANGLE 1 | #define HAVE_GLIBC_BACKTRACE 1 | #define GDB_COMMAND "gdb" | #define ENABLE_UNIQUE_PTR 1 | #define ENABLE_WARNINGS 1 | #define DISABLE_COMMWORLD 1 | #define REQUIRE_SEPARATE_NAMESPACE 1 | #define BOUNDARY_ID_BYTES 2 | #define DOF_ID_BYTES 4 | #define PROCESSOR_ID_BYTES 2 | #define SUBDOMAIN_ID_BYTES 2 | #define UNIQUE_ID_BYTES 8 | #define ENABLE_AMR 1 | #define ENABLE_VSMOOTHER 1 | #define ENABLE_PERIODIC 1 | #define ENABLE_DIRICHLET 1 | #define ENABLE_GHOSTED 1 | #define ENABLE_NODE_VALENCE 1 | #define DIM 3 | #define ENABLE_HIGHER_ORDER_SHAPES 1 | #define ENABLE_SECOND_DERIVATIVES 1 | #define HAVE_RPC_RPC_H 1 | #define HAVE_XDR 1 | #define USE_REAL_NUMBERS 1 | #define ENABLE_REFERENCE_COUNTING 1 | #define HAVE_BOOST /**/ | #define HAVE_BOOST_MOVELIB_UNIQUE_PTR 1 | #define DETECTED_PETSC_VERSION_MAJOR 3 | #define DETECTED_PETSC_VERSION_MINOR 10 | #define DETECTED_PETSC_VERSION_SUBMINOR 4 | #define DETECTED_PETSC_VERSION_RELEASE 1 | #define HAVE_MPI 1 | #define HAVE_PETSC 1 | #define HAVE_PETSC_TAO 1 | #define HAVE_LASPACK 1 | #define HAVE_SFCURVES 1 | #define HAVE_ZLIB_H 1 | #define HAVE_GZSTREAM 1 | #define HAVE_BZIP 1 | #define HAVE_XZ 1 | #define SIZEOF_VOID_P 8 | #define HAVE_TECPLOT_API 1 | #define HAVE_TECPLOT_API_112 1 | #define HAVE_METIS 1 | #define TLS __thread | #define HAVE_PARMETIS 1 | #define HAVE_TETGEN 1 | #define HAVE_TRIANGLE 1 | #define HAVE_QHULL_API 1 | #define HAVE_GMV 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #include configure:40417: result: no configure:40417: checking /usr/include/Eigen/Eigen presence configure:40417: mpicxx -E conftest.cpp conftest.cpp(162): error #2379: cannot open source file "/usr/include/Eigen/Eigen" #include ^ configure:40417: $? = 2 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "libmesh" | #define PACKAGE_TARNAME "libmesh" | #define PACKAGE_VERSION "1.2.1" | #define PACKAGE_STRING "libmesh 1.2.1" | #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net" | #define PACKAGE_URL "http://libmesh.github.io" | #define CONFIGURE_INFO "../libMesh/configure '--prefix=/home/asbhalla/softwares/libMesh-Git/linux-opt' '--with-methods=opt' 'PETSC_DIR=/home/asbhalla/softwares/PETSc-BitBucket/PETSc' 'PETSC_ARCH=linux-opt' 'CC=mpicc' 'CXX=mpicxx' 'FC=mpif90' 'F77=mpif90' '--with-boost=/home/asbhalla/softwares/boost/1.67.0' '--enable-exodus' '--enable-triangle' '--disable-glibcxx-debugging' '--disable-openmp' '--disable-perflog' '--disable-strict-lgpl' '--disable-pthreads' '--disable-cppthreads' 'LDFLAGS=-L/lib64'" | #define PACKAGE "libmesh" | #define VERSION "1.2.1" | #define HAVE_CXX11 1 | #define HAVE_CXX11_MOVE 1 | #define HAVE_CXX11_RANGEFOR 1 | #define HAVE_CXX11_DECLTYPE 1 | #define HAVE_CXX11_RVALUE_REFERENCES 1 | #define HAVE_CXX11_AUTO 1 | #define HAVE_CXX11_LAMBDA 1 | #define HAVE_CXX11_CONSTEXPR 1 | #define HAVE_CXX11_ALIAS_DECLARATIONS 1 | #define HAVE_CXX11_SHARED_PTR 1 | #define HAVE_CXX11_UNIQUE_PTR 1 | #define HAVE_CXX11_MAKE_UNIQUE_WORKAROUND 1 | #define HAVE_CXX11_OVERRIDE 1 | #define HAVE_CXX11_INITIALIZER_LIST 1 | #define HAVE_CXX11_VARIADIC_TEMPLATES 1 | #define HAVE_CXX11_THREAD 1 | #define HAVE_CXX11_CONDITION_VARIABLE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT_COMPLEX 1 | #define HAVE_CXX11_DELETED_FUNCTIONS 1 | #define HAVE_CXX11_FINAL 1 | #define HAVE_CXX11_NULLPTR 1 | #define HAVE_CXX11_TO_STRING 1 | #define HAVE_CXX11_NOEXCEPT 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MAJOR_VERSION 1 | #define MINOR_VERSION 2 | #define MICRO_VERSION 1 | #define LIB_VERSION "1.2.1" | #define LIB_RELEASE "" | #define CXX "mpicxx" | #define IO_COMPATIBILITY_VERSION "0.7.4" | #define HAVE_NAMESPACES /**/ | #define DEFAULT_DOUBLE_PRECISION 1 | #define DEFAULT_SCALAR_TYPE double | #define restrict __restrict | #define HAVE_GETPWUID 1 | #define ENABLE_EXCEPTIONS 1 | #define ENABLE_TIMESTAMPS 1 | #define SIZEOF_SHORT_INT 2 | #define SIZEOF_INT 4 | #define SIZEOF_UNSIGNED_INT 4 | #define SIZEOF_SIZE_T 8 | #define SIZEOF_LONG_INT 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_VOID_P 8 | #define SIZEOF_FUNCTION_POINTER 8 | #define HAVE_RTTI /**/ | #define HAVE_GETOPT_H 1 | #define HAVE_CSIGNAL 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_LOCALE /**/ | #define HAVE_SSTREAM /**/ | #define HAVE_STRINGSTREAM /**/ | #define HAVE_FENV_H 1 | #define HAVE_XMMINTRIN_H 1 | #define HAVE_FEENABLEEXCEPT 1 | #define HAVE_FEDISABLEEXCEPT 1 | #define HAVE_TR1_UNORDERED_MULTIMAP 1 | #define BEST_UNORDERED_MULTIMAP std::tr1::unordered_multimap | #define INCLUDE_UNORDERED_MULTIMAP | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_TR1_UNORDERED_MAP 1 | #define BEST_UNORDERED_MAP std::tr1::unordered_map | #define INCLUDE_UNORDERED_MAP | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_TR1_UNORDERED_MULTISET 1 | #define BEST_UNORDERED_MULTISET std::tr1::unordered_multiset | #define INCLUDE_UNORDERED_MULTISET | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_TR1_UNORDERED_SET 1 | #define BEST_UNORDERED_SET std::tr1::unordered_set | #define INCLUDE_UNORDERED_SET | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_TR1_HASH 1 | #define BEST_HASH std::tr1::hash | #define INCLUDE_HASH | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_DLOPEN 1 | #define HAVE_GCC_ABI_DEMANGLE 1 | #define HAVE_GLIBC_BACKTRACE 1 | #define GDB_COMMAND "gdb" | #define ENABLE_UNIQUE_PTR 1 | #define ENABLE_WARNINGS 1 | #define DISABLE_COMMWORLD 1 | #define REQUIRE_SEPARATE_NAMESPACE 1 | #define BOUNDARY_ID_BYTES 2 | #define DOF_ID_BYTES 4 | #define PROCESSOR_ID_BYTES 2 | #define SUBDOMAIN_ID_BYTES 2 | #define UNIQUE_ID_BYTES 8 | #define ENABLE_AMR 1 | #define ENABLE_VSMOOTHER 1 | #define ENABLE_PERIODIC 1 | #define ENABLE_DIRICHLET 1 | #define ENABLE_GHOSTED 1 | #define ENABLE_NODE_VALENCE 1 | #define DIM 3 | #define ENABLE_HIGHER_ORDER_SHAPES 1 | #define ENABLE_SECOND_DERIVATIVES 1 | #define HAVE_RPC_RPC_H 1 | #define HAVE_XDR 1 | #define USE_REAL_NUMBERS 1 | #define ENABLE_REFERENCE_COUNTING 1 | #define HAVE_BOOST /**/ | #define HAVE_BOOST_MOVELIB_UNIQUE_PTR 1 | #define DETECTED_PETSC_VERSION_MAJOR 3 | #define DETECTED_PETSC_VERSION_MINOR 10 | #define DETECTED_PETSC_VERSION_SUBMINOR 4 | #define DETECTED_PETSC_VERSION_RELEASE 1 | #define HAVE_MPI 1 | #define HAVE_PETSC 1 | #define HAVE_PETSC_TAO 1 | #define HAVE_LASPACK 1 | #define HAVE_SFCURVES 1 | #define HAVE_ZLIB_H 1 | #define HAVE_GZSTREAM 1 | #define HAVE_BZIP 1 | #define HAVE_XZ 1 | #define SIZEOF_VOID_P 8 | #define HAVE_TECPLOT_API 1 | #define HAVE_TECPLOT_API_112 1 | #define HAVE_METIS 1 | #define TLS __thread | #define HAVE_PARMETIS 1 | #define HAVE_TETGEN 1 | #define HAVE_TRIANGLE 1 | #define HAVE_QHULL_API 1 | #define HAVE_GMV 1 | /* end confdefs.h. */ | #include configure:40417: result: no configure:40417: checking for /usr/include/Eigen/Eigen configure:40417: result: no configure:40475: result: <<< external Eigen header files not found, using Eigen from ./contrib >>> configure:40497: checking Eigen/Dense usability configure:40497: mpicxx -c -std=gnu++11 -I../libMesh/contrib/eigen/eigen conftest.cpp >&5 configure:40497: $? = 0 configure:40497: result: yes configure:40497: checking Eigen/Dense presence configure:40497: mpicxx -E -I../libMesh/contrib/eigen/eigen conftest.cpp configure:40497: $? = 0 configure:40497: result: yes configure:40497: checking for Eigen/Dense configure:40497: result: yes configure:40513: checking Eigen/Sparse usability configure:40513: mpicxx -c -std=gnu++11 -I../libMesh/contrib/eigen/eigen conftest.cpp >&5 configure:40513: $? = 0 configure:40513: result: yes configure:40513: checking Eigen/Sparse presence configure:40513: mpicxx -E -I../libMesh/contrib/eigen/eigen conftest.cpp configure:40513: $? = 0 configure:40513: result: yes configure:40513: checking for Eigen/Sparse configure:40513: result: yes configure:40551: checking for eigen - version >= 3.1.2 configure:40580: mpicxx -c -std=gnu++11 -I../libMesh/contrib/eigen/eigen conftest.cpp >&5 configure:40580: $? = 0 configure:40582: result: yes configure:40608: result: <<< Configuring library with Eigen support >>> configure:40744: checking /usr/include/glpk.h usability configure:40744: mpicxx -c -std=gnu++11 conftest.cpp >&5 conftest.cpp(198): catastrophic error: cannot open source file "/usr/include/glpk.h" #include ^ compilation aborted for conftest.cpp (code 4) configure:40744: $? = 4 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "libmesh" | #define PACKAGE_TARNAME "libmesh" | #define PACKAGE_VERSION "1.2.1" | #define PACKAGE_STRING "libmesh 1.2.1" | #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net" | #define PACKAGE_URL "http://libmesh.github.io" | #define CONFIGURE_INFO "../libMesh/configure '--prefix=/home/asbhalla/softwares/libMesh-Git/linux-opt' '--with-methods=opt' 'PETSC_DIR=/home/asbhalla/softwares/PETSc-BitBucket/PETSc' 'PETSC_ARCH=linux-opt' 'CC=mpicc' 'CXX=mpicxx' 'FC=mpif90' 'F77=mpif90' '--with-boost=/home/asbhalla/softwares/boost/1.67.0' '--enable-exodus' '--enable-triangle' '--disable-glibcxx-debugging' '--disable-openmp' '--disable-perflog' '--disable-strict-lgpl' '--disable-pthreads' '--disable-cppthreads' 'LDFLAGS=-L/lib64'" | #define PACKAGE "libmesh" | #define VERSION "1.2.1" | #define HAVE_CXX11 1 | #define HAVE_CXX11_MOVE 1 | #define HAVE_CXX11_RANGEFOR 1 | #define HAVE_CXX11_DECLTYPE 1 | #define HAVE_CXX11_RVALUE_REFERENCES 1 | #define HAVE_CXX11_AUTO 1 | #define HAVE_CXX11_LAMBDA 1 | #define HAVE_CXX11_CONSTEXPR 1 | #define HAVE_CXX11_ALIAS_DECLARATIONS 1 | #define HAVE_CXX11_SHARED_PTR 1 | #define HAVE_CXX11_UNIQUE_PTR 1 | #define HAVE_CXX11_MAKE_UNIQUE_WORKAROUND 1 | #define HAVE_CXX11_OVERRIDE 1 | #define HAVE_CXX11_INITIALIZER_LIST 1 | #define HAVE_CXX11_VARIADIC_TEMPLATES 1 | #define HAVE_CXX11_THREAD 1 | #define HAVE_CXX11_CONDITION_VARIABLE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT_COMPLEX 1 | #define HAVE_CXX11_DELETED_FUNCTIONS 1 | #define HAVE_CXX11_FINAL 1 | #define HAVE_CXX11_NULLPTR 1 | #define HAVE_CXX11_TO_STRING 1 | #define HAVE_CXX11_NOEXCEPT 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MAJOR_VERSION 1 | #define MINOR_VERSION 2 | #define MICRO_VERSION 1 | #define LIB_VERSION "1.2.1" | #define LIB_RELEASE "" | #define CXX "mpicxx" | #define IO_COMPATIBILITY_VERSION "0.7.4" | #define HAVE_NAMESPACES /**/ | #define DEFAULT_DOUBLE_PRECISION 1 | #define DEFAULT_SCALAR_TYPE double | #define restrict __restrict | #define HAVE_GETPWUID 1 | #define ENABLE_EXCEPTIONS 1 | #define ENABLE_TIMESTAMPS 1 | #define SIZEOF_SHORT_INT 2 | #define SIZEOF_INT 4 | #define SIZEOF_UNSIGNED_INT 4 | #define SIZEOF_SIZE_T 8 | #define SIZEOF_LONG_INT 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_VOID_P 8 | #define SIZEOF_FUNCTION_POINTER 8 | #define HAVE_RTTI /**/ | #define HAVE_GETOPT_H 1 | #define HAVE_CSIGNAL 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_LOCALE /**/ | #define HAVE_SSTREAM /**/ | #define HAVE_STRINGSTREAM /**/ | #define HAVE_FENV_H 1 | #define HAVE_XMMINTRIN_H 1 | #define HAVE_FEENABLEEXCEPT 1 | #define HAVE_FEDISABLEEXCEPT 1 | #define HAVE_TR1_UNORDERED_MULTIMAP 1 | #define BEST_UNORDERED_MULTIMAP std::tr1::unordered_multimap | #define INCLUDE_UNORDERED_MULTIMAP | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_TR1_UNORDERED_MAP 1 | #define BEST_UNORDERED_MAP std::tr1::unordered_map | #define INCLUDE_UNORDERED_MAP | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_TR1_UNORDERED_MULTISET 1 | #define BEST_UNORDERED_MULTISET std::tr1::unordered_multiset | #define INCLUDE_UNORDERED_MULTISET | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_TR1_UNORDERED_SET 1 | #define BEST_UNORDERED_SET std::tr1::unordered_set | #define INCLUDE_UNORDERED_SET | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_TR1_HASH 1 | #define BEST_HASH std::tr1::hash | #define INCLUDE_HASH | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_DLOPEN 1 | #define HAVE_GCC_ABI_DEMANGLE 1 | #define HAVE_GLIBC_BACKTRACE 1 | #define GDB_COMMAND "gdb" | #define ENABLE_UNIQUE_PTR 1 | #define ENABLE_WARNINGS 1 | #define DISABLE_COMMWORLD 1 | #define REQUIRE_SEPARATE_NAMESPACE 1 | #define BOUNDARY_ID_BYTES 2 | #define DOF_ID_BYTES 4 | #define PROCESSOR_ID_BYTES 2 | #define SUBDOMAIN_ID_BYTES 2 | #define UNIQUE_ID_BYTES 8 | #define ENABLE_AMR 1 | #define ENABLE_VSMOOTHER 1 | #define ENABLE_PERIODIC 1 | #define ENABLE_DIRICHLET 1 | #define ENABLE_GHOSTED 1 | #define ENABLE_NODE_VALENCE 1 | #define DIM 3 | #define ENABLE_HIGHER_ORDER_SHAPES 1 | #define ENABLE_SECOND_DERIVATIVES 1 | #define HAVE_RPC_RPC_H 1 | #define HAVE_XDR 1 | #define USE_REAL_NUMBERS 1 | #define ENABLE_REFERENCE_COUNTING 1 | #define HAVE_BOOST /**/ | #define HAVE_BOOST_MOVELIB_UNIQUE_PTR 1 | #define DETECTED_PETSC_VERSION_MAJOR 3 | #define DETECTED_PETSC_VERSION_MINOR 10 | #define DETECTED_PETSC_VERSION_SUBMINOR 4 | #define DETECTED_PETSC_VERSION_RELEASE 1 | #define HAVE_MPI 1 | #define HAVE_PETSC 1 | #define HAVE_PETSC_TAO 1 | #define HAVE_LASPACK 1 | #define HAVE_SFCURVES 1 | #define HAVE_ZLIB_H 1 | #define HAVE_GZSTREAM 1 | #define HAVE_BZIP 1 | #define HAVE_XZ 1 | #define SIZEOF_VOID_P 8 | #define HAVE_TECPLOT_API 1 | #define HAVE_TECPLOT_API_112 1 | #define HAVE_METIS 1 | #define TLS __thread | #define HAVE_PARMETIS 1 | #define HAVE_TETGEN 1 | #define HAVE_TRIANGLE 1 | #define HAVE_QHULL_API 1 | #define HAVE_GMV 1 | #define HAVE_EIGEN_DENSE 1 | #define HAVE_EIGEN_SPARSE 1 | #define HAVE_EIGEN 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #include configure:40744: result: no configure:40744: checking /usr/include/glpk.h presence configure:40744: mpicxx -E conftest.cpp conftest.cpp(165): error #2379: cannot open source file "/usr/include/glpk.h" #include ^ configure:40744: $? = 2 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "libmesh" | #define PACKAGE_TARNAME "libmesh" | #define PACKAGE_VERSION "1.2.1" | #define PACKAGE_STRING "libmesh 1.2.1" | #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net" | #define PACKAGE_URL "http://libmesh.github.io" | #define CONFIGURE_INFO "../libMesh/configure '--prefix=/home/asbhalla/softwares/libMesh-Git/linux-opt' '--with-methods=opt' 'PETSC_DIR=/home/asbhalla/softwares/PETSc-BitBucket/PETSc' 'PETSC_ARCH=linux-opt' 'CC=mpicc' 'CXX=mpicxx' 'FC=mpif90' 'F77=mpif90' '--with-boost=/home/asbhalla/softwares/boost/1.67.0' '--enable-exodus' '--enable-triangle' '--disable-glibcxx-debugging' '--disable-openmp' '--disable-perflog' '--disable-strict-lgpl' '--disable-pthreads' '--disable-cppthreads' 'LDFLAGS=-L/lib64'" | #define PACKAGE "libmesh" | #define VERSION "1.2.1" | #define HAVE_CXX11 1 | #define HAVE_CXX11_MOVE 1 | #define HAVE_CXX11_RANGEFOR 1 | #define HAVE_CXX11_DECLTYPE 1 | #define HAVE_CXX11_RVALUE_REFERENCES 1 | #define HAVE_CXX11_AUTO 1 | #define HAVE_CXX11_LAMBDA 1 | #define HAVE_CXX11_CONSTEXPR 1 | #define HAVE_CXX11_ALIAS_DECLARATIONS 1 | #define HAVE_CXX11_SHARED_PTR 1 | #define HAVE_CXX11_UNIQUE_PTR 1 | #define HAVE_CXX11_MAKE_UNIQUE_WORKAROUND 1 | #define HAVE_CXX11_OVERRIDE 1 | #define HAVE_CXX11_INITIALIZER_LIST 1 | #define HAVE_CXX11_VARIADIC_TEMPLATES 1 | #define HAVE_CXX11_THREAD 1 | #define HAVE_CXX11_CONDITION_VARIABLE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT_COMPLEX 1 | #define HAVE_CXX11_DELETED_FUNCTIONS 1 | #define HAVE_CXX11_FINAL 1 | #define HAVE_CXX11_NULLPTR 1 | #define HAVE_CXX11_TO_STRING 1 | #define HAVE_CXX11_NOEXCEPT 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MAJOR_VERSION 1 | #define MINOR_VERSION 2 | #define MICRO_VERSION 1 | #define LIB_VERSION "1.2.1" | #define LIB_RELEASE "" | #define CXX "mpicxx" | #define IO_COMPATIBILITY_VERSION "0.7.4" | #define HAVE_NAMESPACES /**/ | #define DEFAULT_DOUBLE_PRECISION 1 | #define DEFAULT_SCALAR_TYPE double | #define restrict __restrict | #define HAVE_GETPWUID 1 | #define ENABLE_EXCEPTIONS 1 | #define ENABLE_TIMESTAMPS 1 | #define SIZEOF_SHORT_INT 2 | #define SIZEOF_INT 4 | #define SIZEOF_UNSIGNED_INT 4 | #define SIZEOF_SIZE_T 8 | #define SIZEOF_LONG_INT 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_VOID_P 8 | #define SIZEOF_FUNCTION_POINTER 8 | #define HAVE_RTTI /**/ | #define HAVE_GETOPT_H 1 | #define HAVE_CSIGNAL 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_LOCALE /**/ | #define HAVE_SSTREAM /**/ | #define HAVE_STRINGSTREAM /**/ | #define HAVE_FENV_H 1 | #define HAVE_XMMINTRIN_H 1 | #define HAVE_FEENABLEEXCEPT 1 | #define HAVE_FEDISABLEEXCEPT 1 | #define HAVE_TR1_UNORDERED_MULTIMAP 1 | #define BEST_UNORDERED_MULTIMAP std::tr1::unordered_multimap | #define INCLUDE_UNORDERED_MULTIMAP | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_TR1_UNORDERED_MAP 1 | #define BEST_UNORDERED_MAP std::tr1::unordered_map | #define INCLUDE_UNORDERED_MAP | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_TR1_UNORDERED_MULTISET 1 | #define BEST_UNORDERED_MULTISET std::tr1::unordered_multiset | #define INCLUDE_UNORDERED_MULTISET | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_TR1_UNORDERED_SET 1 | #define BEST_UNORDERED_SET std::tr1::unordered_set | #define INCLUDE_UNORDERED_SET | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_TR1_HASH 1 | #define BEST_HASH std::tr1::hash | #define INCLUDE_HASH | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_DLOPEN 1 | #define HAVE_GCC_ABI_DEMANGLE 1 | #define HAVE_GLIBC_BACKTRACE 1 | #define GDB_COMMAND "gdb" | #define ENABLE_UNIQUE_PTR 1 | #define ENABLE_WARNINGS 1 | #define DISABLE_COMMWORLD 1 | #define REQUIRE_SEPARATE_NAMESPACE 1 | #define BOUNDARY_ID_BYTES 2 | #define DOF_ID_BYTES 4 | #define PROCESSOR_ID_BYTES 2 | #define SUBDOMAIN_ID_BYTES 2 | #define UNIQUE_ID_BYTES 8 | #define ENABLE_AMR 1 | #define ENABLE_VSMOOTHER 1 | #define ENABLE_PERIODIC 1 | #define ENABLE_DIRICHLET 1 | #define ENABLE_GHOSTED 1 | #define ENABLE_NODE_VALENCE 1 | #define DIM 3 | #define ENABLE_HIGHER_ORDER_SHAPES 1 | #define ENABLE_SECOND_DERIVATIVES 1 | #define HAVE_RPC_RPC_H 1 | #define HAVE_XDR 1 | #define USE_REAL_NUMBERS 1 | #define ENABLE_REFERENCE_COUNTING 1 | #define HAVE_BOOST /**/ | #define HAVE_BOOST_MOVELIB_UNIQUE_PTR 1 | #define DETECTED_PETSC_VERSION_MAJOR 3 | #define DETECTED_PETSC_VERSION_MINOR 10 | #define DETECTED_PETSC_VERSION_SUBMINOR 4 | #define DETECTED_PETSC_VERSION_RELEASE 1 | #define HAVE_MPI 1 | #define HAVE_PETSC 1 | #define HAVE_PETSC_TAO 1 | #define HAVE_LASPACK 1 | #define HAVE_SFCURVES 1 | #define HAVE_ZLIB_H 1 | #define HAVE_GZSTREAM 1 | #define HAVE_BZIP 1 | #define HAVE_XZ 1 | #define SIZEOF_VOID_P 8 | #define HAVE_TECPLOT_API 1 | #define HAVE_TECPLOT_API_112 1 | #define HAVE_METIS 1 | #define TLS __thread | #define HAVE_PARMETIS 1 | #define HAVE_TETGEN 1 | #define HAVE_TRIANGLE 1 | #define HAVE_QHULL_API 1 | #define HAVE_GMV 1 | #define HAVE_EIGEN_DENSE 1 | #define HAVE_EIGEN_SPARSE 1 | #define HAVE_EIGEN 1 | /* end confdefs.h. */ | #include configure:40744: result: no configure:40744: checking for /usr/include/glpk.h configure:40744: result: no configure:40756: result: GLPK header files not found! configure:40925: checking for valid nlopt installation configure:41007: mpicc -o conftest -I -L/lib64 conftest.c -L -lnlopt -lm >&5 conftest.c(168): catastrophic error: cannot open source file "nlopt.h" #include ^ compilation aborted for conftest.c (code 4) configure:41007: $? = 4 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "libmesh" | #define PACKAGE_TARNAME "libmesh" | #define PACKAGE_VERSION "1.2.1" | #define PACKAGE_STRING "libmesh 1.2.1" | #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net" | #define PACKAGE_URL "http://libmesh.github.io" | #define CONFIGURE_INFO "../libMesh/configure '--prefix=/home/asbhalla/softwares/libMesh-Git/linux-opt' '--with-methods=opt' 'PETSC_DIR=/home/asbhalla/softwares/PETSc-BitBucket/PETSc' 'PETSC_ARCH=linux-opt' 'CC=mpicc' 'CXX=mpicxx' 'FC=mpif90' 'F77=mpif90' '--with-boost=/home/asbhalla/softwares/boost/1.67.0' '--enable-exodus' '--enable-triangle' '--disable-glibcxx-debugging' '--disable-openmp' '--disable-perflog' '--disable-strict-lgpl' '--disable-pthreads' '--disable-cppthreads' 'LDFLAGS=-L/lib64'" | #define PACKAGE "libmesh" | #define VERSION "1.2.1" | #define HAVE_CXX11 1 | #define HAVE_CXX11_MOVE 1 | #define HAVE_CXX11_RANGEFOR 1 | #define HAVE_CXX11_DECLTYPE 1 | #define HAVE_CXX11_RVALUE_REFERENCES 1 | #define HAVE_CXX11_AUTO 1 | #define HAVE_CXX11_LAMBDA 1 | #define HAVE_CXX11_CONSTEXPR 1 | #define HAVE_CXX11_ALIAS_DECLARATIONS 1 | #define HAVE_CXX11_SHARED_PTR 1 | #define HAVE_CXX11_UNIQUE_PTR 1 | #define HAVE_CXX11_MAKE_UNIQUE_WORKAROUND 1 | #define HAVE_CXX11_OVERRIDE 1 | #define HAVE_CXX11_INITIALIZER_LIST 1 | #define HAVE_CXX11_VARIADIC_TEMPLATES 1 | #define HAVE_CXX11_THREAD 1 | #define HAVE_CXX11_CONDITION_VARIABLE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE_COMPLEX 1 | #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT_COMPLEX 1 | #define HAVE_CXX11_DELETED_FUNCTIONS 1 | #define HAVE_CXX11_FINAL 1 | #define HAVE_CXX11_NULLPTR 1 | #define HAVE_CXX11_TO_STRING 1 | #define HAVE_CXX11_NOEXCEPT 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define MAJOR_VERSION 1 | #define MINOR_VERSION 2 | #define MICRO_VERSION 1 | #define LIB_VERSION "1.2.1" | #define LIB_RELEASE "" | #define CXX "mpicxx" | #define IO_COMPATIBILITY_VERSION "0.7.4" | #define HAVE_NAMESPACES /**/ | #define DEFAULT_DOUBLE_PRECISION 1 | #define DEFAULT_SCALAR_TYPE double | #define restrict __restrict | #define HAVE_GETPWUID 1 | #define ENABLE_EXCEPTIONS 1 | #define ENABLE_TIMESTAMPS 1 | #define SIZEOF_SHORT_INT 2 | #define SIZEOF_INT 4 | #define SIZEOF_UNSIGNED_INT 4 | #define SIZEOF_SIZE_T 8 | #define SIZEOF_LONG_INT 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_VOID_P 8 | #define SIZEOF_FUNCTION_POINTER 8 | #define HAVE_RTTI /**/ | #define HAVE_GETOPT_H 1 | #define HAVE_CSIGNAL 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_LOCALE /**/ | #define HAVE_SSTREAM /**/ | #define HAVE_STRINGSTREAM /**/ | #define HAVE_FENV_H 1 | #define HAVE_XMMINTRIN_H 1 | #define HAVE_FEENABLEEXCEPT 1 | #define HAVE_FEDISABLEEXCEPT 1 | #define HAVE_TR1_UNORDERED_MULTIMAP 1 | #define BEST_UNORDERED_MULTIMAP std::tr1::unordered_multimap | #define INCLUDE_UNORDERED_MULTIMAP | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_TR1_UNORDERED_MAP 1 | #define BEST_UNORDERED_MAP std::tr1::unordered_map | #define INCLUDE_UNORDERED_MAP | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_TR1_UNORDERED_MULTISET 1 | #define BEST_UNORDERED_MULTISET std::tr1::unordered_multiset | #define INCLUDE_UNORDERED_MULTISET | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_TR1_UNORDERED_SET 1 | #define BEST_UNORDERED_SET std::tr1::unordered_set | #define INCLUDE_UNORDERED_SET | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_TR1_HASH 1 | #define BEST_HASH std::tr1::hash | #define INCLUDE_HASH | #define DEFINE_HASH_STRING /**/ | #define DEFINE_HASH_POINTERS /**/ | #define HAVE_DLOPEN 1 | #define HAVE_GCC_ABI_DEMANGLE 1 | #define HAVE_GLIBC_BACKTRACE 1 | #define GDB_COMMAND "gdb" | #define ENABLE_UNIQUE_PTR 1 | #define ENABLE_WARNINGS 1 | #define DISABLE_COMMWORLD 1 | #define REQUIRE_SEPARATE_NAMESPACE 1 | #define BOUNDARY_ID_BYTES 2 | #define DOF_ID_BYTES 4 | #define PROCESSOR_ID_BYTES 2 | #define SUBDOMAIN_ID_BYTES 2 | #define UNIQUE_ID_BYTES 8 | #define ENABLE_AMR 1 | #define ENABLE_VSMOOTHER 1 | #define ENABLE_PERIODIC 1 | #define ENABLE_DIRICHLET 1 | #define ENABLE_GHOSTED 1 | #define ENABLE_NODE_VALENCE 1 | #define DIM 3 | #define ENABLE_HIGHER_ORDER_SHAPES 1 | #define ENABLE_SECOND_DERIVATIVES 1 | #define HAVE_RPC_RPC_H 1 | #define HAVE_XDR 1 | #define USE_REAL_NUMBERS 1 | #define ENABLE_REFERENCE_COUNTING 1 | #define HAVE_BOOST /**/ | #define HAVE_BOOST_MOVELIB_UNIQUE_PTR 1 | #define DETECTED_PETSC_VERSION_MAJOR 3 | #define DETECTED_PETSC_VERSION_MINOR 10 | #define DETECTED_PETSC_VERSION_SUBMINOR 4 | #define DETECTED_PETSC_VERSION_RELEASE 1 | #define HAVE_MPI 1 | #define HAVE_PETSC 1 | #define HAVE_PETSC_TAO 1 | #define HAVE_LASPACK 1 | #define HAVE_SFCURVES 1 | #define HAVE_ZLIB_H 1 | #define HAVE_GZSTREAM 1 | #define HAVE_BZIP 1 | #define HAVE_XZ 1 | #define SIZEOF_VOID_P 8 | #define HAVE_TECPLOT_API 1 | #define HAVE_TECPLOT_API_112 1 | #define HAVE_METIS 1 | #define TLS __thread | #define HAVE_PARMETIS 1 | #define HAVE_TETGEN 1 | #define HAVE_TRIANGLE 1 | #define HAVE_QHULL_API 1 | #define HAVE_GMV 1 | #define HAVE_EIGEN_DENSE 1 | #define HAVE_EIGEN_SPARSE 1 | #define HAVE_EIGEN 1 | /* end confdefs.h. */ | | | #include | #include | #include | | double myfunc(unsigned n, const double *x, double *grad, void *my_func_data) | { | if (grad) { | grad[0] = 0.0; | grad[1] = 0.5 / sqrt(x[1]); | } | return sqrt(x[1]); | } | | typedef struct | { | double a, b; | } my_constraint_data; | | double myconstraint(unsigned n, const double *x, double *grad, void *data) | { | my_constraint_data *d = (my_constraint_data *) data; | double a = d->a, b = d->b; | if (grad) { | grad[0] = 3 * a * (a*x[0] + b) * (a*x[0] + b); | grad[1] = -1.0; | } | return ((a*x[0] + b) * (a*x[0] + b) * (a*x[0] + b) - x[1]); | } | | int | main () | { | | double lb[2] = { -HUGE_VAL, 0 }; /* lower bounds */ | nlopt_opt opt; | | opt = nlopt_create(NLOPT_LD_MMA, 2); /* algorithm and dimensionality */ | nlopt_set_lower_bounds(opt, lb); | nlopt_set_min_objective(opt, myfunc, NULL); | | my_constraint_data data[2] = { {2,0}, {-1,1} }; | nlopt_add_inequality_constraint(opt, myconstraint, &data[0], 1e-8); | nlopt_add_inequality_constraint(opt, myconstraint, &data[1], 1e-8); | nlopt_set_xtol_rel(opt, 1e-4); | double x[2] = { 1.234, 5.678 }; /* some initial guess */ | double minf; /* the minimum objective value, upon return */ | | if (nlopt_optimize(opt, x, &minf) < 0) { | printf("nlopt failed!\n"); | } | else { | printf("found minimum at f(%g,%g) = %0.10g\n", x[0], x[1], minf); | } | nlopt_destroy(opt); | return 0; | | ; | return 0; | } | configure:41016: result: no configure:41125: result: <<< Required header files not found, Cap'n Proto support disabled. >>> configure:41350: checking hdf5.h usability configure:41350: mpicc -c conftest.c >&5 configure:41350: $? = 0 configure:41350: result: yes configure:41350: checking hdf5.h presence configure:41350: mpicc -E conftest.c configure:41350: $? = 0 configure:41350: result: yes configure:41350: checking for hdf5.h configure:41350: result: yes configure:41365: checking for HDF5 version >= 1.8.0 configure:41419: mpicc -c conftest.c >&5 configure:41419: $? = 0 configure:41446: result: yes configure:41451: checking for H5Fopen in -lhdf5 configure:41476: mpicc -o conftest -L/lib -lhdf5 -Wl,-rpath,/lib -L/lib64 conftest.c -lhdf5 >&5 ld: skipping incompatible /lib/libm.so when searching for -lm ld: skipping incompatible /lib/libpthread.so when searching for -lpthread ld: skipping incompatible /lib/libc.so when searching for -lc ld: skipping incompatible /lib/libdl.so when searching for -ldl ld: skipping incompatible /lib/libc.so when searching for -lc configure:41476: $? = 0 configure:41485: result: yes configure:41502: checking If HDF5 C++ interface is present configure:41528: mpicxx -o conftest -std=gnu++11 -L/lib -lhdf5 -Wl,-rpath,/lib -L/lib64 conftest.cpp -L/lib -lhdf5 -Wl,-rpath,/lib -L/lib -lhdf5_cpp -Wl,-rpath,/lib >&5 ld: skipping incompatible /lib/libm.so when searching for -lm ld: skipping incompatible /lib/libpthread.so when searching for -lpthread ld: skipping incompatible /lib/libc.so when searching for -lc ld: skipping incompatible /lib/libdl.so when searching for -ldl ld: skipping incompatible /lib/libc.so when searching for -lc configure:41528: $? = 0 configure:41551: result: yes configure:41613: result: <<< Configuring library with HDF5 support >>> configure:41696: result: <<< Configuring library with NetCDF version 4 support >>> configure:41798: result: <<< Configuring library with Exodus version v5.22 support >>> configure:41813: result: <<< Configuring library with Exodus Fortran API >>> configure:41914: result: <<< Configuring library with Nemesis version v5.22 support >>> configure:41986: result: <<< Configuring library with libHilbert support >>> configure:42065: checking for a sed that does not truncate output configure:42129: result: /usr/bin/sed configure:42138: checking for bison configure:42154: found /usr/bin/bison configure:42165: result: bison -y configure:42194: result: <<< Configuring library with fparser support (release version) >>> configure:42198: checking for dlopen support configure:42350: result: yes configure:42357: result: <<< Configuring library with fparser JIT compilation support >>> configure:42485: checking for cppunit-config configure:42516: result: no configure:42526: checking for Cppunit - version >= 1.10.0 configure:42530: result: no configure:42713: result: <<< Configuring library with nanoflann KDtree support >>> configure:42927: result: ---------------------------------------------- configure:42929: result: --- Done configuring for optional packages --- configure:42931: result: ---------------------------------------------- configure:42942: result: removing duplicate include paths... configure:42947: result: removing duplicate libraries... configure:42975: checking for git configure:42993: found /home/asbhalla/softwares/Git-2.1.2/bin/git configure:43005: result: /home/asbhalla/softwares/Git-2.1.2/bin/git configure:43209: checking that generated files are newer than configure configure:43215: result: done configure:43590: creating ./config.status ## ---------------------- ## ## Running config.status. ## ## ---------------------- ## This file was extended by libmesh config.status 1.2.1, which was generated by GNU Autoconf 2.69. Invocation command line was CONFIG_FILES = CONFIG_HEADERS = CONFIG_LINKS = CONFIG_COMMANDS = $ ./config.status on master config.status:1904: creating Makefile config.status:1904: creating include/Makefile config.status:1904: creating include/libmesh/Makefile config.status:1904: creating contrib/Makefile config.status:1904: creating contrib/utils/Makefile config.status:1904: creating contrib/utils/Make.common config.status:1904: creating tests/Makefile config.status:1904: creating contrib/utils/libmesh.pc config.status:1904: creating contrib/utils/libmesh-opt.pc config.status:1904: creating contrib/utils/libmesh-dbg.pc config.status:1904: creating contrib/utils/libmesh-devel.pc config.status:1904: creating contrib/utils/libmesh-prof.pc config.status:1904: creating contrib/utils/libmesh-oprof.pc config.status:1904: creating doc/Doxyfile config.status:1904: creating doc/Makefile config.status:1904: creating doc/html/Makefile config.status:1904: creating contrib/bin/libmesh-config config.status:1904: creating contrib/bin/xda2mgf config.status:1904: creating contrib/bin/create_libmesh_release config.status:1904: creating doc/dot config.status:1904: creating tests/run_unit_tests.sh config.status:1904: creating contrib/boost/include/Makefile config.status:1904: creating contrib/unique_ptr/Makefile config.status:1904: creating contrib/laspack/Makefile config.status:1904: creating contrib/sfcurves/Makefile config.status:1904: creating contrib/gzstream/Makefile config.status:1904: creating contrib/tecplot/tecio/Makefile config.status:1904: creating contrib/tecplot/binary/Makefile config.status:1904: creating contrib/metis/Makefile config.status:1904: creating contrib/parmetis/Makefile config.status:1904: creating contrib/tetgen/Makefile config.status:1904: creating contrib/triangle/Makefile config.status:1904: creating contrib/qhull/qhull/Makefile config.status:1904: creating contrib/gmv/Makefile config.status:1904: creating contrib/eigen/eigen/Makefile config.status:1904: creating contrib/capnproto/Makefile config.status:1904: creating contrib/netcdf/v3/Makefile config.status:1904: creating contrib/exodusii/v5.09/Makefile config.status:1904: creating contrib/exodusii/v5.22/exodus/Makefile config.status:1904: creating contrib/nemesis/v3.09/Makefile config.status:1904: creating contrib/nemesis/v5.22/nemesis/Makefile config.status:1904: creating contrib/libHilbert/Makefile config.status:1904: creating contrib/fparser/Makefile config.status:1904: creating contrib/fparser/extrasrc/Makefile config.status:1904: creating contrib/nanoflann/Makefile config.status:1904: creating examples/introduction/introduction_ex1/Makefile config.status:1904: creating examples/introduction/introduction_ex2/Makefile config.status:1904: creating examples/introduction/introduction_ex3/Makefile config.status:1904: creating examples/introduction/introduction_ex4/Makefile config.status:1904: creating examples/introduction/introduction_ex5/Makefile config.status:1904: creating examples/adaptivity/adaptivity_ex1/Makefile config.status:1904: creating examples/adaptivity/adaptivity_ex2/Makefile config.status:1904: creating examples/adaptivity/adaptivity_ex3/Makefile config.status:1904: creating examples/adaptivity/adaptivity_ex4/Makefile config.status:1904: creating examples/adaptivity/adaptivity_ex5/Makefile config.status:1904: creating examples/adjoints/adjoints_ex1/Makefile config.status:1904: creating examples/adjoints/adjoints_ex2/Makefile config.status:1904: creating examples/adjoints/adjoints_ex3/Makefile config.status:1904: creating examples/adjoints/adjoints_ex4/Makefile config.status:1904: creating examples/adjoints/adjoints_ex5/Makefile config.status:1904: creating examples/eigenproblems/eigenproblems_ex1/Makefile config.status:1904: creating examples/eigenproblems/eigenproblems_ex2/Makefile config.status:1904: creating examples/eigenproblems/eigenproblems_ex3/Makefile config.status:1904: creating examples/fem_system/fem_system_ex1/Makefile config.status:1904: creating examples/fem_system/fem_system_ex2/Makefile config.status:1904: creating examples/fem_system/fem_system_ex3/Makefile config.status:1904: creating examples/fem_system/fem_system_ex4/Makefile config.status:1904: creating examples/solution_transfer/solution_transfer_ex1/Makefile config.status:1904: creating examples/miscellaneous/miscellaneous_ex1/Makefile config.status:1904: creating examples/miscellaneous/miscellaneous_ex2/Makefile config.status:1904: creating examples/miscellaneous/miscellaneous_ex3/Makefile config.status:1904: creating examples/miscellaneous/miscellaneous_ex4/Makefile config.status:1904: creating examples/miscellaneous/miscellaneous_ex5/Makefile config.status:1904: creating examples/miscellaneous/miscellaneous_ex6/Makefile config.status:1904: creating examples/miscellaneous/miscellaneous_ex7/Makefile config.status:1904: creating examples/miscellaneous/miscellaneous_ex8/Makefile config.status:1904: creating examples/miscellaneous/miscellaneous_ex9/Makefile config.status:1904: creating examples/miscellaneous/miscellaneous_ex10/Makefile config.status:1904: creating examples/miscellaneous/miscellaneous_ex11/Makefile config.status:1904: creating examples/miscellaneous/miscellaneous_ex12/Makefile config.status:1904: creating examples/optimization/optimization_ex1/Makefile config.status:1904: creating examples/optimization/optimization_ex2/Makefile config.status:1904: creating examples/subdomains/subdomains_ex1/Makefile config.status:1904: creating examples/subdomains/subdomains_ex2/Makefile config.status:1904: creating examples/subdomains/subdomains_ex3/Makefile config.status:1904: creating examples/systems_of_equations/systems_of_equations_ex1/Makefile config.status:1904: creating examples/systems_of_equations/systems_of_equations_ex2/Makefile config.status:1904: creating examples/systems_of_equations/systems_of_equations_ex3/Makefile config.status:1904: creating examples/systems_of_equations/systems_of_equations_ex4/Makefile config.status:1904: creating examples/systems_of_equations/systems_of_equations_ex5/Makefile config.status:1904: creating examples/systems_of_equations/systems_of_equations_ex6/Makefile config.status:1904: creating examples/systems_of_equations/systems_of_equations_ex7/Makefile config.status:1904: creating examples/systems_of_equations/systems_of_equations_ex8/Makefile config.status:1904: creating examples/reduced_basis/reduced_basis_ex1/Makefile config.status:1904: creating examples/reduced_basis/reduced_basis_ex2/Makefile config.status:1904: creating examples/reduced_basis/reduced_basis_ex3/Makefile config.status:1904: creating examples/reduced_basis/reduced_basis_ex4/Makefile config.status:1904: creating examples/reduced_basis/reduced_basis_ex5/Makefile config.status:1904: creating examples/reduced_basis/reduced_basis_ex6/Makefile config.status:1904: creating examples/reduced_basis/reduced_basis_ex7/Makefile config.status:1904: creating examples/transient/transient_ex1/Makefile config.status:1904: creating examples/transient/transient_ex2/Makefile config.status:1904: creating examples/vector_fe/vector_fe_ex1/Makefile config.status:1904: creating examples/vector_fe/vector_fe_ex2/Makefile config.status:1904: creating examples/vector_fe/vector_fe_ex3/Makefile config.status:1904: creating examples/vector_fe/vector_fe_ex4/Makefile config.status:1904: creating examples/Makefile config.status:1904: creating include/libmesh_config.h.tmp config.status:2118: executing include/libmesh_config.h commands config.status:2161: creating include/libmesh_config.h - prefix LIBMESH for include/libmesh_config.h.tmp defines config.status:2118: executing depfiles commands config.status:2118: executing libtool commands configure:46746: === configuring in contrib/netcdf/v4 (/home/asbhalla/softwares/libMesh-Git/objs-opt/contrib/netcdf/v4) configure:46809: running /bin/sh ../../../../libMesh/contrib/netcdf/v4/configure --disable-option-checking '--prefix=/home/asbhalla/softwares/libMesh-Git/linux-opt' '--with-methods=opt' 'PETSC_DIR=/home/asbhalla/softwares/PETSc-BitBucket/PETSc' 'PETSC_ARCH=linux-opt' 'CC=mpicc' 'CXX=mpicxx' 'FC=mpif90' 'F77=mpif90' '--with-boost=/home/asbhalla/softwares/boost/1.67.0' '--enable-exodus' '--enable-triangle' '--disable-glibcxx-debugging' '--disable-openmp' '--disable-perflog' '--disable-strict-lgpl' '--disable-pthreads' '--disable-cppthreads' 'LDFLAGS=-L/lib64' '--disable-testsets' 'CXX=mpicxx' 'CC=mpicc' 'F77=mpif90' 'FC=mpif90' 'CPPFLAGS= ' 'LIBS=-L/lib -lhdf5 -Wl,-rpath,/lib ' --cache-file=/dev/null --srcdir=../../../../libMesh/contrib/netcdf/v4 configure:47019: result: --------------------------------------------- configure:47021: result: --------- Done Configuring libMesh ---------- configure:47023: result: --------------------------------------------- ## ---------------- ## ## Cache variables. ## ## ---------------- ## ac_cv_build=x86_64-unknown-linux-gnu ac_cv_c_compiler_gnu=yes ac_cv_c_restrict=__restrict ac_cv_cxx_compiler_gnu=yes ac_cv_cxx_dlopen=yes ac_cv_cxx_gcc_abi_demangle=yes ac_cv_cxx_glibc_backtrace=yes ac_cv_cxx_hash=no ac_cv_cxx_have_locale=yes ac_cv_cxx_have_sstream=yes ac_cv_cxx_namespaces=yes ac_cv_cxx_rtti=yes ac_cv_cxx_tr1_hash=yes ac_cv_cxx_tr1_unordered_map=yes ac_cv_cxx_tr1_unordered_multimap=yes ac_cv_cxx_tr1_unordered_multiset=yes ac_cv_cxx_tr1_unordered_set=yes ac_cv_cxx_unordered_map=no ac_cv_cxx_unordered_multimap=no ac_cv_cxx_unordered_multiset=no ac_cv_cxx_unordered_set=no ac_cv_env_CCC_set= ac_cv_env_CCC_value= ac_cv_env_CC_set=set ac_cv_env_CC_value=mpicc ac_cv_env_CFLAGS_set= ac_cv_env_CFLAGS_value= ac_cv_env_CPPFLAGS_set= ac_cv_env_CPPFLAGS_value= ac_cv_env_CPP_set= ac_cv_env_CPP_value= ac_cv_env_CXXCPP_set= ac_cv_env_CXXCPP_value= ac_cv_env_CXXFLAGS_set= ac_cv_env_CXXFLAGS_value= ac_cv_env_CXX_set=set ac_cv_env_CXX_value=mpicxx ac_cv_env_F77_set=set ac_cv_env_F77_value=mpif90 ac_cv_env_FCFLAGS_set= ac_cv_env_FCFLAGS_value= ac_cv_env_FC_set=set ac_cv_env_FC_value=mpif90 ac_cv_env_FFLAGS_set= ac_cv_env_FFLAGS_value= ac_cv_env_HDF5_DIR_set= ac_cv_env_HDF5_DIR_value= ac_cv_env_LDFLAGS_set=set ac_cv_env_LDFLAGS_value=-L/lib64 ac_cv_env_LIBS_set= ac_cv_env_LIBS_value= ac_cv_env_LT_SYS_LIBRARY_PATH_set= ac_cv_env_LT_SYS_LIBRARY_PATH_value= ac_cv_env_METHODS_set= ac_cv_env_METHODS_value= ac_cv_env_PETSC_ARCH_set=set ac_cv_env_PETSC_ARCH_value=linux-opt ac_cv_env_PETSC_DIR_set=set ac_cv_env_PETSC_DIR_value=/home/asbhalla/softwares/PETSc-BitBucket/PETSc ac_cv_env_SLEPC_DIR_set= ac_cv_env_SLEPC_DIR_value= ac_cv_env_TRILINOS_DIR_set= ac_cv_env_TRILINOS_DIR_value= ac_cv_env_VTK_DIR_set= ac_cv_env_VTK_DIR_value= ac_cv_env_VTK_INCLUDE_set= ac_cv_env_VTK_INCLUDE_value= ac_cv_env_YACC_set= ac_cv_env_YACC_value= ac_cv_env_YFLAGS_set= ac_cv_env_YFLAGS_value= ac_cv_env_build_alias_set= ac_cv_env_build_alias_value= ac_cv_env_host_alias_set= ac_cv_env_host_alias_value= ac_cv_env_libmesh_CFLAGS_set= ac_cv_env_libmesh_CFLAGS_value= ac_cv_env_libmesh_CPPFLAGS_set= ac_cv_env_libmesh_CPPFLAGS_value= ac_cv_env_libmesh_CXXFLAGS_set= ac_cv_env_libmesh_CXXFLAGS_value= ac_cv_env_target_alias_set= ac_cv_env_target_alias_value= ac_cv_f77_compiler_gnu=no ac_cv_fc_compiler_gnu=no ac_cv_file_src_base_libmesh_C=no ac_cv_func_xdrstdio_create=yes ac_cv_have_fedisableexcept=yes ac_cv_have_feenableexcept=yes ac_cv_header_Eigen_Dense=yes ac_cv_header_Eigen_Sparse=yes ac_cv_header_X11_Intrinsic_h=yes ac_cv_header__home_asbhalla_softwares_PETSc_BitBucket_PETSc_include_petscversion_h=yes ac_cv_header__linux_opt_include_slepcconf_h=no ac_cv_header__usr_include_Eigen_Eigen=no ac_cv_header__usr_include_glpk_h=no ac_cv_header__usr_include_tbb_task_scheduler_init_h=no ac_cv_header__usr_lib_slepc_include_slepcversion_h=no ac_cv_header__vtkConfigure_h=no ac_cv_header_csignal=yes ac_cv_header_dlfcn_h=yes ac_cv_header_fenv_h=yes ac_cv_header_getopt_h=yes ac_cv_header_hdf5_h=yes ac_cv_header_inttypes_h=yes ac_cv_header_memory_h=yes ac_cv_header_rpc_rpc_h=yes ac_cv_header_stdc=yes ac_cv_header_stdint_h=yes ac_cv_header_stdlib_h=yes ac_cv_header_string_h=yes ac_cv_header_strings_h=yes ac_cv_header_sys_resource_h=yes ac_cv_header_sys_stat_h=yes ac_cv_header_sys_types_h=yes ac_cv_header_unistd_h=yes ac_cv_header_xmmintrin_h=yes ac_cv_header_zlib_h=yes ac_cv_host=x86_64-unknown-linux-gnu ac_cv_lib_hdf5_H5Fopen=yes ac_cv_lib_z_gzopen=yes ac_cv_objext=o ac_cv_path_CPPUNIT_CONFIG=no ac_cv_path_DOXYGEN=/usr/bin/doxygen ac_cv_path_EGREP='/usr/bin/grep -E' ac_cv_path_FGREP='/usr/bin/grep -F' ac_cv_path_GREP=/usr/bin/grep ac_cv_path_PERL=/usr/bin/perl ac_cv_path_PKG_CONFIG=/usr/bin/pkg-config ac_cv_path_SED=/usr/bin/sed ac_cv_path_gitquery=/home/asbhalla/softwares/Git-2.1.2/bin/git ac_cv_path_install='/usr/bin/install -c' ac_cv_path_lt_DD=/usr/bin/dd ac_cv_path_mkdir=/usr/bin/mkdir ac_cv_prog_AWK=gawk ac_cv_prog_BUNZIP2=bunzip2 ac_cv_prog_BZIP2=bzip2 ac_cv_prog_CPP='mpicc -E' ac_cv_prog_CXXCPP='mpicxx -E' ac_cv_prog_XZ=xz ac_cv_prog_YACC='bison -y' ac_cv_prog_ac_ct_AR=ar ac_cv_prog_ac_ct_OBJDUMP=objdump ac_cv_prog_ac_ct_RANLIB=ranlib ac_cv_prog_ac_ct_STRIP=strip ac_cv_prog_cc_c89= ac_cv_prog_cc_g=yes ac_cv_prog_cxx_g=yes ac_cv_prog_f77_g=yes ac_cv_prog_fc_g=yes ac_cv_prog_make_make_set=yes ac_cv_search_cos='none required' ac_cv_search_dlopen='none required' ac_cv_search_sqrt='none required' ac_cv_search_trunc='none required' ac_cv_sizeof_double=8 ac_cv_sizeof_float=4 ac_cv_sizeof_function_pointer=8 ac_cv_sizeof_int=4 ac_cv_sizeof_long_int=8 ac_cv_sizeof_short_int=2 ac_cv_sizeof_size_t=8 ac_cv_sizeof_unsigned_int=4 ac_cv_sizeof_void_p=8 ac_cv_target=x86_64-unknown-linux-gnu ac_cv_tls=__thread am_cv_CC_dependencies_compiler_type=gcc3 am_cv_CXX_dependencies_compiler_type=gcc3 am_cv_make_support_nested_variables=yes am_cv_prog_cc_c_o=yes am_cv_prog_tar_ustar=gnutar ax_cv_cxx_compile_cxx11=no ax_cv_cxx_compile_cxx11__std_gnupp11=yes lt_cv_ar_at_file=@ lt_cv_archive_cmds_need_lc=no lt_cv_deplibs_check_method=pass_all lt_cv_file_magic_cmd='$MAGIC_CMD' lt_cv_file_magic_test_file= lt_cv_ld_reload_flag=-r lt_cv_nm_interface='BSD nm' lt_cv_objdir=.libs lt_cv_path_LD=/usr/bin/ld lt_cv_path_LDCXX='/usr/bin/ld -m elf_x86_64' lt_cv_path_NM='/usr/bin/nm -B' lt_cv_path_mainfest_tool=no lt_cv_prog_compiler_c_o=yes lt_cv_prog_compiler_c_o_CXX=yes lt_cv_prog_compiler_c_o_F77=yes lt_cv_prog_compiler_c_o_FC=yes lt_cv_prog_compiler_pic='-fPIC -DPIC' lt_cv_prog_compiler_pic_CXX='-fPIC -DPIC' lt_cv_prog_compiler_pic_F77=-fPIC lt_cv_prog_compiler_pic_FC=-fPIC lt_cv_prog_compiler_pic_works=yes lt_cv_prog_compiler_pic_works_CXX=yes lt_cv_prog_compiler_pic_works_F77=yes lt_cv_prog_compiler_pic_works_FC=yes lt_cv_prog_compiler_rtti_exceptions=yes lt_cv_prog_compiler_static_works=no lt_cv_prog_compiler_static_works_CXX=no lt_cv_prog_compiler_static_works_F77=no lt_cv_prog_compiler_static_works_FC=no lt_cv_prog_gnu_ld=yes lt_cv_prog_gnu_ldcxx=yes lt_cv_sharedlib_from_linklib_cmd='printf %s\n' lt_cv_shlibpath_overrides_runpath=yes lt_cv_sys_global_symbol_pipe='sed -n -e '\''s/^.*[ ]\([ABCDGIRSTW][ABCDGIRSTW]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p'\'' | sed '\''/ __gnu_lto/d'\''' lt_cv_sys_global_symbol_to_c_name_address='sed -n -e '\''s/^: \(.*\) .*$/ {"\1", (void *) 0},/p'\'' -e '\''s/^[ABCDGIRSTW][ABCDGIRSTW]* .* \(.*\)$/ {"\1", (void *) \&\1},/p'\''' lt_cv_sys_global_symbol_to_c_name_address_lib_prefix='sed -n -e '\''s/^: \(.*\) .*$/ {"\1", (void *) 0},/p'\'' -e '\''s/^[ABCDGIRSTW][ABCDGIRSTW]* .* \(lib.*\)$/ {"\1", (void *) \&\1},/p'\'' -e '\''s/^[ABCDGIRSTW][ABCDGIRSTW]* .* \(.*\)$/ {"lib\1", (void *) \&\1},/p'\''' lt_cv_sys_global_symbol_to_cdecl='sed -n -e '\''s/^T .* \(.*\)$/extern int \1();/p'\'' -e '\''s/^[ABCDGIRSTW][ABCDGIRSTW]* .* \(.*\)$/extern char \1;/p'\''' lt_cv_sys_global_symbol_to_import= lt_cv_sys_max_cmd_len=1572864 lt_cv_to_host_file_cmd=func_convert_file_noop lt_cv_to_tool_file_cmd=func_convert_file_noop lt_cv_truncate_bin='/usr/bin/dd bs=4096 count=1' ## ----------------- ## ## Output variables. ## ## ----------------- ## ACLOCAL='${SHELL} /home/asbhalla/softwares/libMesh-Git/libMesh/build-aux/missing aclocal-1.15' AMDEPBACKSLASH='\' AMDEP_FALSE='#' AMDEP_TRUE='' AMTAR='$${TAR-tar}' AM_BACKSLASH='\' AM_DEFAULT_V='$(AM_DEFAULT_VERBOSITY)' AM_DEFAULT_VERBOSITY='0' AM_V='$(V)' AR='ar' AUTOCONF='${SHELL} /home/asbhalla/softwares/libMesh-Git/libMesh/build-aux/missing autoconf' AUTOHEADER='${SHELL} /home/asbhalla/softwares/libMesh-Git/libMesh/build-aux/missing autoheader' AUTOMAKE='${SHELL} /home/asbhalla/softwares/libMesh-Git/libMesh/build-aux/missing automake-1.15' AWK='gawk' AZTECOO_INCLUDES='' AZTECOO_LIBS='' AZTECOO_MAKEFILE_EXPORT='' BOOST_CPPFLAGS='-I/home/asbhalla/softwares/boost/1.67.0/include' BOOST_LDFLAGS='' BUILD_ARCH='x86_64-unknown-linux-gnu' BUILD_DEVSTATUS='Development Build' 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HAVE_CXX11_VARIADIC_TEMPLATES_TRUE='' HAVE_CXX14_MAKE_UNIQUE_FALSE='' HAVE_CXX14_MAKE_UNIQUE_TRUE='#' HAVE_DOT='NO' HAVE_GCOV_TOOLS='0' HDF5_CFLAGS='' HDF5_CPPFLAGS='' HDF5_CXXLIBS='-L/lib -lhdf5_cpp -Wl,-rpath,/lib' HDF5_DIR='' HDF5_FLIBS='-L/lib -lhdf5_fortran -Wl,-rpath,/lib' HDF5_LIBS='-L/lib -lhdf5 -Wl,-rpath,/lib' HDF5_PREFIX='' INSTALL_DATA='${INSTALL} -m 644' INSTALL_PROGRAM='${INSTALL}' INSTALL_SCRIPT='${INSTALL}' INSTALL_STRIP_PROGRAM='$(install_sh) -c -s' LASPACK_INCLUDE='-I$(top_srcdir)/contrib/laspack' LASPACK_LIB='$(EXTERNAL_LIBDIR)/liblaspack$(libext)' LD='/usr/bin/ld -m elf_x86_64' LDFLAGS='-L/lib64' LIBHILBERT_INCLUDE='-I$(top_srcdir)/contrib/libHilbert/include' LIBHILBERT_LIBRARY='$(EXTERNAL_LIBDIR)/libHilbert$(libext)' LIBMESH_DBG_MODE_FALSE='' LIBMESH_DBG_MODE_TRUE='#' LIBMESH_DEVEL_MODE_FALSE='' LIBMESH_DEVEL_MODE_TRUE='#' LIBMESH_ENABLE_CAPNPROTO_FALSE='' LIBMESH_ENABLE_CAPNPROTO_TRUE='#' LIBMESH_ENABLE_COMPLEX_FALSE='' LIBMESH_ENABLE_COMPLEX_TRUE='#' 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LIBMESH_ENABLE_INFINITE_ELEMENTS_TRUE='' LIBMESH_ENABLE_LASPACK_FALSE='#' LIBMESH_ENABLE_LASPACK_TRUE='' LIBMESH_ENABLE_LIBHILBERT_FALSE='#' LIBMESH_ENABLE_LIBHILBERT_TRUE='' LIBMESH_ENABLE_METIS_FALSE='#' LIBMESH_ENABLE_METIS_TRUE='' LIBMESH_ENABLE_NANOFLANN_FALSE='#' LIBMESH_ENABLE_NANOFLANN_TRUE='' LIBMESH_ENABLE_NEMESIS_FALSE='#' LIBMESH_ENABLE_NEMESIS_TRUE='' LIBMESH_ENABLE_NEMESIS_V309_FALSE='' LIBMESH_ENABLE_NEMESIS_V309_TRUE='#' LIBMESH_ENABLE_NEMESIS_V522_FALSE='#' LIBMESH_ENABLE_NEMESIS_V522_TRUE='' LIBMESH_ENABLE_NETCDF_FALSE='#' LIBMESH_ENABLE_NETCDF_TRUE='' LIBMESH_ENABLE_NETCDF_V3_FALSE='' LIBMESH_ENABLE_NETCDF_V3_TRUE='#' LIBMESH_ENABLE_NETCDF_V4_FALSE='#' LIBMESH_ENABLE_NETCDF_V4_TRUE='' LIBMESH_ENABLE_NLOPT_FALSE='' LIBMESH_ENABLE_NLOPT_TRUE='#' LIBMESH_ENABLE_PARMETIS_FALSE='#' LIBMESH_ENABLE_PARMETIS_TRUE='' LIBMESH_ENABLE_PETSC_FALSE='#' LIBMESH_ENABLE_PETSC_TRUE='' LIBMESH_ENABLE_QHULL_FALSE='#' LIBMESH_ENABLE_QHULL_TRUE='' LIBMESH_ENABLE_SFC_FALSE='#' LIBMESH_ENABLE_SFC_TRUE='' LIBMESH_ENABLE_SLEPC_FALSE='' LIBMESH_ENABLE_SLEPC_TRUE='#' LIBMESH_ENABLE_TECIO_FALSE='#' LIBMESH_ENABLE_TECIO_TRUE='' LIBMESH_ENABLE_TECPLOT_FALSE='' LIBMESH_ENABLE_TECPLOT_TRUE='#' LIBMESH_ENABLE_TETGEN_FALSE='#' LIBMESH_ENABLE_TETGEN_TRUE='' LIBMESH_ENABLE_TRIANGLE_FALSE='#' LIBMESH_ENABLE_TRIANGLE_TRUE='' LIBMESH_ENABLE_VTK_FALSE='' LIBMESH_ENABLE_VTK_TRUE='#' LIBMESH_INSTALL_HINNANT_UNIQUE_PTR_FALSE='' LIBMESH_INSTALL_HINNANT_UNIQUE_PTR_TRUE='#' LIBMESH_INSTALL_INTERNAL_BOOST_FALSE='' LIBMESH_INSTALL_INTERNAL_BOOST_TRUE='#' LIBMESH_INSTALL_INTERNAL_EIGEN_FALSE='#' LIBMESH_INSTALL_INTERNAL_EIGEN_TRUE='' LIBMESH_OPROF_MODE_FALSE='' LIBMESH_OPROF_MODE_TRUE='#' LIBMESH_OPT_MODE_FALSE='#' LIBMESH_OPT_MODE_TRUE='' LIBMESH_PROF_MODE_FALSE='' LIBMESH_PROF_MODE_TRUE='#' LIBMESH_VPATH_BUILD_FALSE='#' LIBMESH_VPATH_BUILD_TRUE='' LIBOBJS='' LIBS='' LIBTOOL='$(SHELL) $(top_builddir)/libtool' LIPO='' LN_S='ln -s' LTLIBOBJS='' LT_SYS_LIBRARY_PATH='' MAINT='#' MAINTAINER_MODE_FALSE='' MAINTAINER_MODE_TRUE='#' MAKEINFO='${SHELL} /home/asbhalla/softwares/libMesh-Git/libMesh/build-aux/missing makeinfo' MANIFEST_TOOL=':' METHOD='' METHODS='opt' METIS_INCLUDE='-I$(top_srcdir)/contrib/metis/include' METIS_LIB='$(EXTERNAL_LIBDIR)/libmetis$(libext) $(EXTERNAL_LIBDIR)/libGK$(libext)' MKDIR_P='/usr/bin/mkdir -p' ML_INCLUDES='' ML_LIBS='' ML_MAKEFILE_EXPORT='' MPCXX='' MPI='' MPI_IMPL='petsc_snooped' MPI_INCLUDES_PATH='' MPI_INCLUDES_PATHS='' MPI_LIBS='' MPI_LIBS_PATH='' MPI_LIBS_PATHS='' NANOFLANN_INCLUDE='-I$(top_srcdir)/contrib/nanoflann/include' NEMESIS_INCLUDE='-I$(top_srcdir)/contrib/nemesis/v5.22/nemesis' NETCDF_INCLUDE='-I$(top_srcdir)/contrib/netcdf/v4/include' NLOPT_INCLUDE='-I' NLOPT_LIBRARY='-L -lnlopt' NM='/usr/bin/nm -B' NMEDIT='' NODEPRECATEDFLAG='-Wno-deprecated' NOX_INCLUDES='' NOX_LIBS='' NOX_MAKEFILE_EXPORT='' OBJDUMP='objdump' OBJEXT='o' OPENMP_CFLAGS='' OPENMP_CXXFLAGS='' OPENMP_FFLAGS='' OPROFILE_FLAGS='-g' OTOOL64='' OTOOL='' PACKAGE='libmesh' PACKAGE_BUGREPORT='libmesh-users@lists.sourceforge.net' PACKAGE_NAME='libmesh' PACKAGE_STRING='libmesh 1.2.1' PACKAGE_TARNAME='libmesh' PACKAGE_URL='http://libmesh.github.io' PACKAGE_VERSION='1.2.1' PARMETIS_INCLUDE='-I$(top_srcdir)/contrib/parmetis/include' PARMETIS_LIB='$(EXTERNAL_LIBDIR)/libparmetis$(libext)' PATH_SEPARATOR=':' PERL='/usr/bin/perl' PETSCARCH='' PETSCINCLUDEDIRS='-I/home/asbhalla/softwares/PETSc-BitBucket/PETSc/include -I/home/asbhalla/softwares/PETSc-BitBucket/PETSc/linux-opt/include -I/home/asbhalla/softwares/PETSc-BitBucket/PETSc/linux-opt/include -I/home/asbhalla/softwares/PETSc-BitBucket/PETSc/include -I/home/asbhalla/softwares/PETSc-BitBucket/PETSc/linux-opt/include' PETSCLINKLIBS='-Wl,-rpath,/home/asbhalla/softwares/PETSc-BitBucket/PETSc/linux-opt/lib -L/home/asbhalla/softwares/PETSc-BitBucket/PETSc/linux-opt/lib -Wl,-rpath,/home/asbhalla/softwares/PETSc-BitBucket/PETSc/linux-opt/lib -L/home/asbhalla/softwares/PETSc-BitBucket/PETSc/linux-opt/lib -Wl,-rpath,/opt/intel/mkl/lib/intel64 -L/opt/intel/mkl/lib/intel64 -Wl,-rpath,/opt/mellanox/hcoll/lib -L/opt/mellanox/hcoll/lib -Wl,-rpath,/opt/mellanox/mxm/lib -L/opt/mellanox/mxm/lib -Wl,-rpath,/usr/local/mpi/intel/openmpi-4.0.0/lib64 -L/usr/local/mpi/intel/openmpi-4.0.0/lib64 -Wl,-rpath,/opt/intel/compilers_and_libraries_2018.2.199/linux/tbb/lib/intel64/gcc4.4 -L/opt/intel/compilers_and_libraries_2018.2.199/linux/tbb/lib/intel64/gcc4.4 -Wl,-rpath,/opt/intel/compilers_and_libraries_2018.2.199/linux/mkl/lib/intel64 -L/opt/intel/compilers_and_libraries_2018.2.199/linux/mkl/lib/intel64 -Wl,-rpath,/opt/intel/compilers_and_libraries_2018.2.199/linux/compiler/lib/intel64 -L/opt/intel/compilers_and_libraries_2018.2.199/linux/compiler/lib/intel64 -Wl,-rpath,/opt/intel/compilers_and_libraries_2018.2.199/linux/ipp/lib/intel64 -L/opt/intel/compilers_and_libraries_2018.2.199/linux/ipp/lib/intel64 -Wl,-rpath,/opt/intel/compilers_and_libraries_2018.2.199/linux/compiler/lib/intel64_lin -L/opt/intel/compilers_and_libraries_2018.2.199/linux/compiler/lib/intel64_lin -Wl,-rpath,/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -lpetsc -lHYPRE -lmkl_intel_lp64 -lmkl_sequential -lmkl_core -lpthread -lstdc++ -ldl -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lifport -lifcoremt_pic -limf -lsvml -lm -lipgo -lirc -lpthread -lgcc_s -lirc_s -lstdc++ -ldl' PETSC_ARCH='linux-opt' PETSC_CC_INCLUDES='-I/home/asbhalla/softwares/PETSc-BitBucket/PETSc/include -I/home/asbhalla/softwares/PETSc-BitBucket/PETSc/linux-opt/include' PETSC_DIR='/home/asbhalla/softwares/PETSc-BitBucket/PETSc' PETSC_FC_INCLUDES='-I/home/asbhalla/softwares/PETSc-BitBucket/PETSc/include -I/home/asbhalla/softwares/PETSc-BitBucket/PETSc/linux-opt/include' PKG_CONFIG='/usr/bin/pkg-config' PROFILING_FLAGS='-qp' PTHREAD_CC='' PTHREAD_CFLAGS='' PTHREAD_LIBS='' PWD='/home/asbhalla/softwares/libMesh-Git/objs-opt' QHULL_LIBS='-lm' RANLIB='ranlib' RPATHFLAG='-Wl,-rpath,' SED='/usr/bin/sed' SET_MAKE='' SFC_INCLUDE='-I$(top_srcdir)/contrib/sfcurves' SFC_LIB='$(EXTERNAL_LIBDIR)/libsfcurves$(libext)' SHELL='/bin/sh' SLEPC_DIR='' SLEPC_INCLUDE='' SLEPC_LIBS='' STRIP='strip' TBB_INCLUDE='' TBB_LIBRARY='' TECIO_CPPFLAGS='-DLINUX64 -DLINUX -I/usr/include' TECIO_INCLUDE='-I$(top_srcdir)/contrib/tecplot/tecio/include' TETGEN_INCLUDE='-I$(top_srcdir)/contrib/tetgen' TETGEN_LIBRARY='$(EXTERNAL_LIBDIR)/libtetgen$(libext)' TPETRA_INCLUDES='' TPETRA_LIBS='' TPETRA_MAKEFILE_EXPORT='' TRIANGLE_INCLUDE='-I$(top_srcdir)/contrib/triangle' TRIANGLE_LIBRARY='$(EXTERNAL_LIBDIR)/libtriangle$(libext)' TRILINOS_DIR='no' TRILINOS_INCLUDES='' TRILINOS_LIBS='' TRILINOS_MAKEFILE_EXPORT='' VERSION='1.2.1' VTK_DIR='/usr' VTK_INCLUDE='' VTK_LIBRARY='' XZ='xz' YACC='bison -y' YFLAGS='' ac_ct_AR='ar' ac_ct_CC='' ac_ct_CXX='' ac_ct_DUMPBIN='' ac_ct_F77='' ac_ct_FC='' am__EXEEXT_FALSE='' am__EXEEXT_TRUE='#' am__fastdepCC_FALSE='#' am__fastdepCC_TRUE='' am__fastdepCXX_FALSE='#' am__fastdepCXX_TRUE='' am__include='include' am__isrc=' -I$(srcdir)' am__leading_dot='.' am__nodep='_no' am__quote='' am__tar='tar --format=ustar -chf - "$$tardir"' am__untar='tar -xf -' ax_pthread_config='' bindir='${exec_prefix}/bin' build='x86_64-unknown-linux-gnu' build_alias='' build_cpu='x86_64' build_os='linux-gnu' build_vendor='unknown' datadir='${datarootdir}' datarootdir='${prefix}/share' docdir='${datarootdir}/doc/${PACKAGE_TARNAME}' dvidir='${docdir}' enabledefaultcommworld='no' enablelegacyincludepaths='no' enablepetsc='yes' enableuniqueptr='yes' enablewarnings='yes' exec_prefix='${prefix}' gitquery='/home/asbhalla/softwares/Git-2.1.2/bin/git' have_gcov='' host='x86_64-unknown-linux-gnu' host_alias='' host_cpu='x86_64' host_os='linux-gnu' host_vendor='unknown' htmldir='${docdir}' includedir='${prefix}/include' infodir='${datarootdir}/info' install_sh='${SHELL} /home/asbhalla/softwares/libMesh-Git/libMesh/build-aux/install-sh' libdir='${exec_prefix}/lib' libexecdir='${exec_prefix}/libexec' libmesh_CFLAGS=' ' libmesh_CPPFLAGS='' libmesh_CXXFLAGS=' ' libmesh_LDFLAGS='' libmesh_contrib_INCLUDES='-I$(top_srcdir)/contrib/nanoflann/include -I$(top_srcdir)/contrib/fparser -I$(top_srcdir)/contrib/libHilbert/include -I$(top_srcdir)/contrib/nemesis/v5.22/nemesis -I$(top_srcdir)/contrib/exodusii/v5.22/exodus/cbind/include -I$(top_srcdir)/contrib/netcdf/v4/include -I$(top_srcdir)/contrib/eigen/eigen -I$(top_srcdir)/contrib/gmv -I$(top_srcdir)/contrib/qhull/qhull/src -I$(top_srcdir)/contrib/qhull/qhull/src/libqhull -I$(top_srcdir)/contrib/qhull/qhull/src/libqhullcpp -I$(top_srcdir)/contrib/triangle -I$(top_srcdir)/contrib/tetgen -I$(top_srcdir)/contrib/parmetis/include -I$(top_srcdir)/contrib/metis/include -I$(top_srcdir)/contrib/tecplot/tecio/include -I$(top_srcdir)/contrib/gzstream -I$(top_srcdir)/contrib/sfcurves -I$(top_srcdir)/contrib/laspack ' libmesh_installed_LIBS='' libmesh_optional_INCLUDES='-I/home/asbhalla/softwares/PETSc-BitBucket/PETSc/include -I/home/asbhalla/softwares/PETSc-BitBucket/PETSc/linux-opt/include -I/home/asbhalla/softwares/boost/1.67.0/include' libmesh_optional_LIBS='-lhdf5 -lhdf5_cpp -lz -L/home/asbhalla/softwares/PETSc-BitBucket/PETSc/linux-opt/lib -Wl,-rpath,/home/asbhalla/softwares/PETSc-BitBucket/PETSc/linux-opt/lib -Wl,-rpath,/opt/intel/mkl/lib/intel64 -L/opt/intel/mkl/lib/intel64 -Wl,-rpath,/opt/mellanox/hcoll/lib -L/opt/mellanox/hcoll/lib -Wl,-rpath,/opt/mellanox/mxm/lib -L/opt/mellanox/mxm/lib -Wl,-rpath,/opt/intel/compilers_and_libraries_2018.2.199/linux/tbb/lib/intel64/gcc4.4 -L/opt/intel/compilers_and_libraries_2018.2.199/linux/tbb/lib/intel64/gcc4.4 -Wl,-rpath,/opt/intel/compilers_and_libraries_2018.2.199/linux/mkl/lib/intel64 -L/opt/intel/compilers_and_libraries_2018.2.199/linux/mkl/lib/intel64 -Wl,-rpath,/opt/intel/compilers_and_libraries_2018.2.199/linux/compiler/lib/intel64 -L/opt/intel/compilers_and_libraries_2018.2.199/linux/compiler/lib/intel64 -Wl,-rpath,/opt/intel/compilers_and_libraries_2018.2.199/linux/ipp/lib/intel64 -L/opt/intel/compilers_and_libraries_2018.2.199/linux/ipp/lib/intel64 -Wl,-rpath,/opt/intel/compilers_and_libraries_2018.2.199/linux/compiler/lib/intel64_lin -L/opt/intel/compilers_and_libraries_2018.2.199/linux/compiler/lib/intel64_lin -lpetsc -lHYPRE -lmkl_intel_lp64 -lmkl_sequential -lmkl_core -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lifport -lifcoremt_pic -limf -lsvml -lm -lipgo -lirc -lpthread -lgcc_s -lirc_s -lstdc++ -ldl -L/lib -Wl,-rpath,/lib -Wl,-rpath,/usr/local/mpi/intel/openmpi-4.0.0/lib64 -L/usr/local/mpi/intel/openmpi-4.0.0/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-redhat-linux/4.8.5 -L/usr/lib/gcc/x86_64-redhat-linux/4.8.5' libmesh_pkgconfig_requires='netcdf >= 4.2 ' localedir='${datarootdir}/locale' localstatedir='${prefix}/var' mandir='${datarootdir}/man' mkdir_p='$(MKDIR_P)' oldincludedir='/usr/include' pdfdir='${docdir}' petscmajor='3' petscmajorminor='3.10.x' petscversion='3.10.4' prefix='/home/asbhalla/softwares/libMesh-Git/linux-opt' program_transform_name='s,x,x,' psdir='${docdir}' sbindir='${exec_prefix}/sbin' sharedstatedir='${prefix}/com' subdirs=' contrib/netcdf/v4' sysconfdir='${prefix}/etc' target='x86_64-unknown-linux-gnu' target_alias='' target_cpu='x86_64' target_os='linux-gnu' target_vendor='unknown' vtkbuild='' vtkmajor='' vtkversion='' ## ----------- ## ## confdefs.h. ## ## ----------- ## /* confdefs.h */ #define PACKAGE_NAME "libmesh" #define PACKAGE_TARNAME "libmesh" #define PACKAGE_VERSION "1.2.1" #define PACKAGE_STRING "libmesh 1.2.1" #define PACKAGE_BUGREPORT "libmesh-users@lists.sourceforge.net" #define PACKAGE_URL "http://libmesh.github.io" #define CONFIGURE_INFO "../libMesh/configure '--prefix=/home/asbhalla/softwares/libMesh-Git/linux-opt' '--with-methods=opt' 'PETSC_DIR=/home/asbhalla/softwares/PETSc-BitBucket/PETSc' 'PETSC_ARCH=linux-opt' 'CC=mpicc' 'CXX=mpicxx' 'FC=mpif90' 'F77=mpif90' '--with-boost=/home/asbhalla/softwares/boost/1.67.0' '--enable-exodus' '--enable-triangle' '--disable-glibcxx-debugging' '--disable-openmp' '--disable-perflog' '--disable-strict-lgpl' '--disable-pthreads' '--disable-cppthreads' 'LDFLAGS=-L/lib64'" #define PACKAGE "libmesh" #define VERSION "1.2.1" #define HAVE_CXX11 1 #define HAVE_CXX11_MOVE 1 #define HAVE_CXX11_RANGEFOR 1 #define HAVE_CXX11_DECLTYPE 1 #define HAVE_CXX11_RVALUE_REFERENCES 1 #define HAVE_CXX11_AUTO 1 #define HAVE_CXX11_LAMBDA 1 #define HAVE_CXX11_CONSTEXPR 1 #define HAVE_CXX11_ALIAS_DECLARATIONS 1 #define HAVE_CXX11_SHARED_PTR 1 #define HAVE_CXX11_UNIQUE_PTR 1 #define HAVE_CXX11_MAKE_UNIQUE_WORKAROUND 1 #define HAVE_CXX11_OVERRIDE 1 #define HAVE_CXX11_INITIALIZER_LIST 1 #define HAVE_CXX11_VARIADIC_TEMPLATES 1 #define HAVE_CXX11_THREAD 1 #define HAVE_CXX11_CONDITION_VARIABLE 1 #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE 1 #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE 1 #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT 1 #define HAVE_CXX11_INVERSE_HYPERBOLIC_SINE_COMPLEX 1 #define HAVE_CXX11_INVERSE_HYPERBOLIC_COSINE_COMPLEX 1 #define HAVE_CXX11_INVERSE_HYPERBOLIC_TANGENT_COMPLEX 1 #define HAVE_CXX11_DELETED_FUNCTIONS 1 #define HAVE_CXX11_FINAL 1 #define HAVE_CXX11_NULLPTR 1 #define HAVE_CXX11_TO_STRING 1 #define HAVE_CXX11_NOEXCEPT 1 #define STDC_HEADERS 1 #define HAVE_SYS_TYPES_H 1 #define HAVE_SYS_STAT_H 1 #define HAVE_STDLIB_H 1 #define HAVE_STRING_H 1 #define HAVE_MEMORY_H 1 #define HAVE_STRINGS_H 1 #define HAVE_INTTYPES_H 1 #define HAVE_STDINT_H 1 #define HAVE_UNISTD_H 1 #define HAVE_DLFCN_H 1 #define LT_OBJDIR ".libs/" #define MAJOR_VERSION 1 #define MINOR_VERSION 2 #define MICRO_VERSION 1 #define LIB_VERSION "1.2.1" #define LIB_RELEASE "" #define CXX "mpicxx" #define IO_COMPATIBILITY_VERSION "0.7.4" #define HAVE_NAMESPACES /**/ #define DEFAULT_DOUBLE_PRECISION 1 #define DEFAULT_SCALAR_TYPE double #define restrict __restrict #define HAVE_GETPWUID 1 #define ENABLE_EXCEPTIONS 1 #define ENABLE_TIMESTAMPS 1 #define SIZEOF_SHORT_INT 2 #define SIZEOF_INT 4 #define SIZEOF_UNSIGNED_INT 4 #define SIZEOF_SIZE_T 8 #define SIZEOF_LONG_INT 8 #define SIZEOF_FLOAT 4 #define SIZEOF_DOUBLE 8 #define SIZEOF_VOID_P 8 #define SIZEOF_FUNCTION_POINTER 8 #define HAVE_RTTI /**/ #define HAVE_GETOPT_H 1 #define HAVE_CSIGNAL 1 #define HAVE_SYS_RESOURCE_H 1 #define HAVE_LOCALE /**/ #define HAVE_SSTREAM /**/ #define HAVE_STRINGSTREAM /**/ #define HAVE_FENV_H 1 #define HAVE_XMMINTRIN_H 1 #define HAVE_FEENABLEEXCEPT 1 #define HAVE_FEDISABLEEXCEPT 1 #define HAVE_TR1_UNORDERED_MULTIMAP 1 #define BEST_UNORDERED_MULTIMAP std::tr1::unordered_multimap #define INCLUDE_UNORDERED_MULTIMAP #define DEFINE_HASH_STRING /**/ #define DEFINE_HASH_POINTERS /**/ #define HAVE_TR1_UNORDERED_MAP 1 #define BEST_UNORDERED_MAP std::tr1::unordered_map #define INCLUDE_UNORDERED_MAP #define DEFINE_HASH_STRING /**/ #define DEFINE_HASH_POINTERS /**/ #define HAVE_TR1_UNORDERED_MULTISET 1 #define BEST_UNORDERED_MULTISET std::tr1::unordered_multiset #define INCLUDE_UNORDERED_MULTISET #define DEFINE_HASH_STRING /**/ #define DEFINE_HASH_POINTERS /**/ #define HAVE_TR1_UNORDERED_SET 1 #define BEST_UNORDERED_SET std::tr1::unordered_set #define INCLUDE_UNORDERED_SET #define DEFINE_HASH_STRING /**/ #define DEFINE_HASH_POINTERS /**/ #define HAVE_TR1_HASH 1 #define BEST_HASH std::tr1::hash #define INCLUDE_HASH #define DEFINE_HASH_STRING /**/ #define DEFINE_HASH_POINTERS /**/ #define HAVE_DLOPEN 1 #define HAVE_GCC_ABI_DEMANGLE 1 #define HAVE_GLIBC_BACKTRACE 1 #define GDB_COMMAND "gdb" #define ENABLE_UNIQUE_PTR 1 #define ENABLE_WARNINGS 1 #define DISABLE_COMMWORLD 1 #define REQUIRE_SEPARATE_NAMESPACE 1 #define BOUNDARY_ID_BYTES 2 #define DOF_ID_BYTES 4 #define PROCESSOR_ID_BYTES 2 #define SUBDOMAIN_ID_BYTES 2 #define UNIQUE_ID_BYTES 8 #define ENABLE_AMR 1 #define ENABLE_VSMOOTHER 1 #define ENABLE_PERIODIC 1 #define ENABLE_DIRICHLET 1 #define ENABLE_GHOSTED 1 #define ENABLE_NODE_VALENCE 1 #define DIM 3 #define ENABLE_HIGHER_ORDER_SHAPES 1 #define ENABLE_SECOND_DERIVATIVES 1 #define HAVE_RPC_RPC_H 1 #define HAVE_XDR 1 #define USE_REAL_NUMBERS 1 #define ENABLE_REFERENCE_COUNTING 1 #define HAVE_BOOST /**/ #define HAVE_BOOST_MOVELIB_UNIQUE_PTR 1 #define DETECTED_PETSC_VERSION_MAJOR 3 #define DETECTED_PETSC_VERSION_MINOR 10 #define DETECTED_PETSC_VERSION_SUBMINOR 4 #define DETECTED_PETSC_VERSION_RELEASE 1 #define HAVE_MPI 1 #define HAVE_PETSC 1 #define HAVE_PETSC_TAO 1 #define HAVE_LASPACK 1 #define HAVE_SFCURVES 1 #define HAVE_ZLIB_H 1 #define HAVE_GZSTREAM 1 #define HAVE_BZIP 1 #define HAVE_XZ 1 #define SIZEOF_VOID_P 8 #define HAVE_TECPLOT_API 1 #define HAVE_TECPLOT_API_112 1 #define HAVE_METIS 1 #define TLS __thread #define HAVE_PARMETIS 1 #define HAVE_TETGEN 1 #define HAVE_TRIANGLE 1 #define HAVE_QHULL_API 1 #define HAVE_GMV 1 #define HAVE_EIGEN_DENSE 1 #define HAVE_EIGEN_SPARSE 1 #define HAVE_EIGEN 1 #define HAVE_HDF5_CXX 1 #define HAVE_HDF5 1 #define HAVE_NETCDF 1 #define HAVE_EXODUS_API 1 #define HAVE_NEMESIS_API 1 #define HAVE_LIBHILBERT 1 #define HAVE_FPARSER 1 #define HAVE_FPARSER_DEVEL 0 #define HAVE_FPARSER_JIT 1 #define HAVE_NANOFLANN 1 #define BUILD_USER "asbhalla" #define BUILD_ARCH "x86_64-unknown-linux-gnu" #define BUILD_HOST "master" #define BUILD_VERSION "262c8c4d4c9669b6116084260baa39633743f4c9" #define BUILD_DEVSTATUS "Development Build" #define BUILD_DATE __DATE__ " " __TIME__ configure: exit 0