<div dir="ltr">This word is wrong burden  ... pardon me ... I am sorry ... There is no edit here </div><div class="gmail_extra"><br><div class="gmail_quote">On 30 April 2018 at 22:31,  <span dir="ltr"><<a href="mailto:petsc-users-request@mcs.anl.gov" target="_blank">petsc-users-request@mcs.anl.gov</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">Send petsc-users mailing list submissions to<br>
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Today's Topics:<br>
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   1.  Fwd:  PDSLin hybrid solver performance with PETSc (Afrah Najib)<br>
<br>
<br>
------------------------------<wbr>------------------------------<wbr>----------<br>
<br>
Message: 1<br>
Date: Mon, 30 Apr 2018 22:31:04 +0300<br>
From: Afrah Najib <<a href="mailto:afrah.nacib@gmail.com">afrah.nacib@gmail.com</a>><br>
To: PETSc <<a href="mailto:petsc-users@mcs.anl.gov">petsc-users@mcs.anl.gov</a>><br>
Subject: [petsc-users] Fwd:  PDSLin hybrid solver performance with<br>
        PETSc<br>
Message-ID:<br>
        <CAPo_9=<a href="mailto:D8p0fC2fzqHCeMPg2DyZU-vdxEZ-FaYiHU_od-togaHA@mail.gmail.com">D8p0fC2fzqHCeMPg2DyZU-<wbr>vdxEZ-FaYiHU_od-togaHA@mail.<wbr>gmail.com</a>><br>
Content-Type: text/plain; charset="utf-8"<br>
<br>
I beg your burden, how can I use those tools of PETSc in PDSLin program ...<br>
<br>
valgrind is working in such "mpirun -n $n valgrind ./dtest_pdslin<br>
$inputFIle $matrixFile "<br>
<br>
but these options are not working<br>
<br>
---------- Forwarded message ----------<br>
From: Smith, Barry F. <<a href="mailto:bsmith@mcs.anl.gov">bsmith@mcs.anl.gov</a>><br>
Date: 30 April 2018 at 18:39<br>
Subject: Re: [petsc-users] PDSLin hybrid solver performance with PETSc<br>
To: Afrah Najib <<a href="mailto:afrah.nacib@gmail.com">afrah.nacib@gmail.com</a>><br>
Cc: PETSc <<a href="mailto:petsc-users@mcs.anl.gov">petsc-users@mcs.anl.gov</a>>, "Xiaoye S. Li" <<a href="mailto:xsli@lbl.gov">xsli@lbl.gov</a>>,<br>
Ichitaro Yamazaki <<a href="mailto:iyamazak@icl.utk.edu">iyamazak@icl.utk.edu</a>>, Ichitaro Yamazaki <<br>
<a href="mailto:ic.yamazaki@gmail.com">ic.yamazaki@gmail.com</a>><br>
<br>
<br>
<br>
   Looks like there is a divide by a variable that is zero in pdslin where<br>
the code doesn't first check if the value is not zero.<br>
<br>
   You can try using the option -start_in_debugger and in each debugger<br>
window use the debugger option to catch floating point exceptions and then<br>
type cont to continue the run. Yes this is annoying when you have so many<br>
debugger windows but is the only simple way to determine immediately the<br>
line of code that is producing the floating point exception.<br>
<br>
   Barry<br>
<br>
<br>
> On Apr 30, 2018, at 6:20 AM, Afrah Najib <<a href="mailto:afrah.nacib@gmail.com">afrah.nacib@gmail.com</a>> wrote:<br>
><br>
> Hi all,<br>
><br>
> I am testing PDSLin hybrid solver performance with PETSc krylov method on<br>
a SPD matrix called audik_1 matrix(format is ijv full matrix ordered by<br>
rows)<br>
> <a href="https://sparse.tamu.edu/GHS_psdef/audikw_1" rel="noreferrer" target="_blank">https://sparse.tamu.edu/GHS_<wbr>psdef/audikw_1</a><br>
><br>
> I am also running on cluster with  Intel(R) Xeon(R) CPU E5-2680 v4 @<br>
2.40GHz processor and 28 core , 128 ; 512GB per node<br>
><br>
> but it takes a lot of time for Schur complement factorization.<br>
><br>
> Compiler      Subdomains      processors      Precond TmatrixPartition<br>
    TmatrixDist     Tfactorise      TcompApproSchur TprepApproSchur<br>
Tfactoschur     Tprecond_Total  Tsolve<br>
> gcc   8       128     Sparse  23.49532        0.6009915       6.059546<br>
    212.8243        0.04027608      38.74885        257.6796        13.69609<br>
> gcc   8       16      Sparse  11.864  0.4385703       27.23499<br>
1390.153        0.5523289       55.20706        1473.207        4.213825<br>
> gcc   8       32      Sparse  9.912792        0.2592737       16.79125<br>
    934.3571        0.2372452       49.39175        1000.813        37.2029<br>
> gcc   8       64      Sparse  12.61929        0.2336042       8.2316<br>
632.839 0.1113939       52.21551        693.4153        13.94034<br>
><br>
> My PETSc in stallation configuration is like this:<br>
><br>
> export PETSC_DIR=/X/petsc<br>
> export PETSC_ARCH=arch-real<br>
><br>
> ./configure PETSC_DIR=/X/petsc \<br>
> prefix=/X/petsc/petsc-install \<br>
> PETSC_ARCH=arch-real  \<br>
> --with-debugging=0 \<br>
> --with-cc=/Y/progs/openmpi/<wbr>openmpi-3.0.0-gcc-7.1.0/bin/<wbr>mpicc \<br>
> --with-cxx=/Y/progs/openmpi/<wbr>openmpi-3.0.0-gcc-7.1.0/bin/<wbr>mpicxx \<br>
> --with-fc=/Y/progs/openmpi/<wbr>openmpi-3.0.0-gcc-7.1.0/bin/<wbr>mpif90 \<br>
> --with-valgrind=1 \<br>
> --with-valgrind-dir=/X/root/<wbr>usr/local/valgrind-3.13.0 \<br>
> --with-hwloc-dir=/X/root/usr/<wbr>local/hwloc-1.11.9 \<br>
> --with-blas-lapack-dir=/Y/<wbr>progs/intel/compilers_and_<br>
libraries_2017.0.098/linux/<wbr>mkl/lib/intel64.<br>
><br>
> My slurm scrpt content is like this:<br>
><br>
> #!/bin/bash -l<br>
> #SBATCH -J "Paudik16"<br>
> #SBATCH -A X<br>
> #SBATCH -p X<br>
> #SBATCH --exclusive<br>
> #SBATCH -o Paudik_8_2_16.%j.out<br>
> #SBATCH -e Paudik_8_2_16.%j.err<br>
><br>
> #SBATCH -N 8<br>
> #SBATCH --ntasks-per-node=2<br>
> #SBATCH --cpus-per-task=1<br>
><br>
> export KMP_AFFINITY=verbose,disabled<br>
> export MKL_NUM_THREADS=${SLURM_CPUS_<wbr>PER_TASK}<br>
> export OMP_NUM_THREADS=${SLURM_CPUS_<wbr>PER_TASK}<br>
><br>
> module purge<br>
><br>
> module load gcc/7.1.0<br>
> module load mpi/openmpi-3.0.0-gcc-7.1.0<br>
> module load intel/mkl_2017.0.098<br>
><br>
> file=<a href="http://input.in" rel="noreferrer" target="_blank">input.in</a><br>
> matrixFile=~/dataDir/ijv/<wbr>audikw_1.ijv<br>
><br>
> mpirun -np  $SLURM_NTASKS ./dtest_pdslin $file $matrixFile<br>
><br>
><br>
><br>
> I attached an output of one file along with the input configuration of<br>
PDSLin.<br>
><br>
> Any idea of how to enhance these results.<br>
><br>
> Note  in PDSLin, I tried with parallel Schur permutation but I got the<br>
following error :<br>
><br>
> [1]PETSC ERROR: ------------------------------<br>
------------------------------<wbr>------------<br>
> [1]PETSC ERROR: Caught signal number 8 FPE: Floating Point<br>
E/Xception,probably divide by zero<br>
> [1]PETSC ERROR: Try option -start_in_debugger or -on_error_attach_debugger<br>
> [1]PETSC ERROR: or see <a href="http://www.mcs.anl.gov/petsc/" rel="noreferrer" target="_blank">http://www.mcs.anl.gov/petsc/</a><br>
documentation/faq.html#<wbr>valgrind<br>
> [1]PETSC ERROR: or try <a href="http://valgrind.org" rel="noreferrer" target="_blank">http://valgrind.org</a> on GNU/linu/X and Apple Mac OS<br>
/X to find memory corruption errors<br>
> [1]PETSC ERROR: configure using --with-debugging=yes, recompile, link,<br>
and run<br>
> [1]PETSC ERROR: to get more information on the crash.<br>
> [1]PETSC ERROR: --------------------- Error Message<br>
------------------------------<wbr>------------------------------<wbr>--<br>
> ------------------------------<wbr>------------------------------<wbr>--------------<br>
> MPI_ABORT was invoked on rank 1 in communicator MPI_COMM_WORLD<br>
> with errorcode 59.<br>
><br>
> NOTE: invoking MPI_ABORT causes Open MPI to kill all MPI processes.<br>
> You may or may not see output from other processes, depending on<br>
> e/Xactly when Open MPI kills them.<br>
> ------------------------------<wbr>------------------------------<wbr>--------------<br>
> [13]PETSC ERROR: ------------------------------<br>
------------------------------<wbr>------------<br>
> [13]PETSC ERROR: Caught signal number 8 FPE: Floating Point<br>
E/Xception,probably divide by zero<br>
> [13]PETSC ERROR: Try option -start_in_debugger or<br>
-on_error_attach_debugger<br>
> [13]PETSC ERROR: or see <a href="http://www.mcs.anl.gov/petsc/" rel="noreferrer" target="_blank">http://www.mcs.anl.gov/petsc/</a><br>
documentation/faq.html#<wbr>valgrind<br>
> [13]PETSC ERROR: or try <a href="http://valgrind.org" rel="noreferrer" target="_blank">http://valgrind.org</a> on GNU/linu/X and Apple Mac<br>
OS /X to find memory corruption errors<br>
> [13]PETSC ERROR: configure using --with-debugging=yes, recompile, link,<br>
and run<br>
> [13]PETSC ERROR: to get more information on the crash.<br>
> [11]PETSC ERROR: ------------------------------<br>
------------------------------<wbr>------------<br>
> [11]PETSC ERROR: Caught signal number 8 FPE: Floating Point<br>
E/Xception,probably divide by zero<br>
> [11]PETSC ERROR: Try option -start_in_debugger or<br>
-on_error_attach_debugger<br>
> [11]PETSC ERROR: or see <a href="http://www.mcs.anl.gov/petsc/" rel="noreferrer" target="_blank">http://www.mcs.anl.gov/petsc/</a><br>
documentation/faq.html#<wbr>valgrind<br>
> [11]PETSC ERROR: or try <a href="http://valgrind.org" rel="noreferrer" target="_blank">http://valgrind.org</a> on GNU/linu/X and Apple Mac<br>
OS /X to find memory corruption errors<br>
> [11]PETSC ERROR: configure using --with-debugging=yes, recompile, link,<br>
and run<br>
> [11]PETSC ERROR: to get more information on the crash.<br>
> [3]PETSC ERROR: ------------------------------<br>
------------------------------<wbr>------------<br>
> [3]PETSC ERROR: Caught signal number 8 FPE: Floating Point<br>
E/Xception,probably divide by zero<br>
> [3]PETSC ERROR: Try option -start_in_debugger or -on_error_attach_debugger<br>
> [3]PETSC ERROR: or see <a href="http://www.mcs.anl.gov/petsc/" rel="noreferrer" target="_blank">http://www.mcs.anl.gov/petsc/</a><br>
documentation/faq.html#<wbr>valgrind<br>
> [3]PETSC ERROR: or try <a href="http://valgrind.org" rel="noreferrer" target="_blank">http://valgrind.org</a> on GNU/linu/X and Apple Mac OS<br>
/X to find memory corruption errors<br>
> [3]PETSC ERROR: configure using --with-debugging=yes, recompile, link,<br>
and run<br>
> [3]PETSC ERROR: to get more information on the crash.<br>
> [3]PETSC ERROR: --------------------- Error Message<br>
------------------------------<wbr>------------------------------<wbr>--<br>
> [3]PETSC ERROR: Signal received<br>
> [3]PETSC ERROR: See <a href="http://www.mcs.anl.gov/petsc/documentation/faq.html" rel="noreferrer" target="_blank">http://www.mcs.anl.gov/petsc/<wbr>documentation/faq.html</a><br>
for trouble shooting.<br>
> [3]PETSC ERROR: Petsc Release Version 3.9.0, unknown<br>
> [3]PETSC ERROR: [9]PETSC ERROR: ------------------------------<br>
------------------------------<wbr>------------<br>
> [9]PETSC ERROR: Caught signal number 8 FPE: Floating Point<br>
E/Xception,probably divide by zero<br>
> [9]PETSC ERROR: Try option -start_in_debugger or -on_error_attach_debugger<br>
> [9]PETSC ERROR: or see <a href="http://www.mcs.anl.gov/petsc/" rel="noreferrer" target="_blank">http://www.mcs.anl.gov/petsc/</a><br>
documentation/faq.html#<wbr>valgrind<br>
> [9]PETSC ERROR: or try <a href="http://valgrind.org" rel="noreferrer" target="_blank">http://valgrind.org</a> on GNU/linu/X and Apple Mac OS<br>
/X to find memory corruption errors<br>
> [9]PETSC ERROR: configure using --with-debugging=yes, recompile, link,<br>
and run<br>
> [9]PETSC ERROR: to get more information on the crash.<br>
> [7]PETSC ERROR: ------------------------------<br>
------------------------------<wbr>------------<br>
> [7]PETSC ERROR: Caught signal number 8 FPE: Floating Point<br>
E/Xception,probably divide by zero<br>
> [7]PETSC ERROR: Try option -start_in_debugger or -on_error_attach_debugger<br>
> [7]PETSC ERROR: or see <a href="http://www.mcs.anl.gov/petsc/" rel="noreferrer" target="_blank">http://www.mcs.anl.gov/petsc/</a><br>
documentation/faq.html#<wbr>valgrind<br>
> [7]PETSC ERROR: or try <a href="http://valgrind.org" rel="noreferrer" target="_blank">http://valgrind.org</a> on GNU/linu/X and Apple Mac OS<br>
/X to find memory corruption errors<br>
> [7]PETSC ERROR: configure using --with-debugging=yes, recompile, link,<br>
and run<br>
> [7]PETSC ERROR: to get more information on the crash.<br>
> [5]PETSC ERROR: ------------------------------<br>
------------------------------<wbr>------------<br>
> [5]PETSC ERROR: Caught signal number 8 FPE: Floating Point<br>
E/Xception,probably divide by zero<br>
> [5]PETSC ERROR: Try option -start_in_debugger or -on_error_attach_debugger<br>
> [5]PETSC ERROR: or see <a href="http://www.mcs.anl.gov/petsc/" rel="noreferrer" target="_blank">http://www.mcs.anl.gov/petsc/</a><br>
documentation/faq.html#<wbr>valgrind<br>
> [5]PETSC ERROR: or try <a href="http://valgrind.org" rel="noreferrer" target="_blank">http://valgrind.org</a> on GNU/linu/X and Apple Mac OS<br>
/X to find memory corruption errors<br>
> [5]PETSC ERROR: configure using --with-debugging=yes, recompile, link,<br>
and run<br>
> [5]PETSC ERROR: to get more information on the crash.<br>
> [5]PETSC ERROR: --------------------- Error Message<br>
------------------------------<wbr>------------------------------<wbr>--<br>
> [5]PETSC ERROR: Signal received<br>
> [5]PETSC ERROR: See <a href="http://www.mcs.anl.gov/petsc/documentation/faq.html" rel="noreferrer" target="_blank">http://www.mcs.anl.gov/petsc/<wbr>documentation/faq.html</a><br>
for trouble shooting.<br>
> [5]PETSC ERROR: Petsc Release Version 3.9.0, unknown<br>
> [5]PETSC ERROR: [15]PETSC ERROR: ------------------------------<br>
------------------------------<wbr>------------<br>
> [15]PETSC ERROR: Caught signal number 8 FPE: Floating Point<br>
E/Xception,probably divide by zero<br>
> [15]PETSC ERROR: Try option -start_in_debugger or<br>
-on_error_attach_debugger<br>
> [15]PETSC ERROR: or see <a href="http://www.mcs.anl.gov/petsc/" rel="noreferrer" target="_blank">http://www.mcs.anl.gov/petsc/</a><br>
documentation/faq.html#<wbr>valgrind<br>
> [15]PETSC ERROR: [13]PETSC ERROR: --------------------- Error Message<br>
------------------------------<wbr>------------------------------<wbr>--<br>
> [13]PETSC ERROR: Signal received<br>
> [13]PETSC ERROR: See <a href="http://www.mcs.anl.gov/petsc/documentation/faq.html" rel="noreferrer" target="_blank">http://www.mcs.anl.gov/petsc/<wbr>documentation/faq.html</a><br>
for trouble shooting.<br>
> [13]PETSC ERROR: Petsc Release Version 3.9.0, unknown<br>
> [13]PETSC ERROR: ./dtest_pdslin on a  named s060 by afarea Mon Apr 30<br>
05:29:53 2018<br>
> [13]PETSC ERROR: Configure options PETSC_DIR=/X/petsc<br>
prefi/X=/X/petsc/petsc-install PETSC_ARCH=arch-real --with-debugging=0<br>
--with-cc=/okyanus/progs/<wbr>openmpi/openmpi-3.0.0-gcc-7.1.<wbr>0/bin/mpicc<br>
--with-c/X/X=/okyanus/progs/<wbr>openmpi/openmpi-3.0.0-gcc-7.1.<wbr>0/bin/mpic/X/X<br>
--with-fc=/okyanus/progs/<wbr>openmpi/openmpi-3.0.0-gcc-7.1.<wbr>0/bin/mpif90<br>
--with-valgrind=1 --with-valgrind-dir=/X/root/<wbr>usr/local/valgrind-3.13.0<br>
--with-hwloc-dir=/X/root/usr/<wbr>local/hwloc-1.11.9 --with-blaslapack-dir=/<br>
okyanus/progs/intel/compilers_<wbr>and_libraries_2017.0.098/linu/<br>
X/mkl/lib/intel64<br>
> [11]PETSC ERROR: --------------------- Error Message<br>
------------------------------<wbr>------------------------------<wbr>--<br>
> [11]PETSC ERROR: Signal received<br>
> [11]PETSC ERROR: See <a href="http://www.mcs.anl.gov/petsc/documentation/faq.html" rel="noreferrer" target="_blank">http://www.mcs.anl.gov/petsc/<wbr>documentation/faq.html</a><br>
for trouble shooting.<br>
> [11]PETSC ERROR: Petsc Release Version 3.9.0, unknown<br>
> [11]PETSC ERROR: ./dtest_pdslin on a  named s054 by afarea Mon Apr 30<br>
05:29:53 2018<br>
> [11]PETSC ERROR: Configure options PETSC_DIR=/X/petsc<br>
prefi/X=/X/petsc/petsc-install PETSC_ARCH=arch-real --with-debugging=0<br>
--with-cc=/okyanus/progs/<wbr>openmpi/openmpi-3.0.0-gcc-7.1.<wbr>0/bin/mpicc<br>
--with-c/X/X=/okyanus/progs/<wbr>openmpi/openmpi-3.0.0-gcc-7.1.<wbr>0/bin/mpic/X/X<br>
--with-fc=/okyanus/progs/<wbr>openmpi/openmpi-3.0.0-gcc-7.1.<wbr>0/bin/mpif90<br>
--with-valgrind=1 --with-valgrind-dir=/X/root/<wbr>usr/local/valgrind-3.13.0<br>
--with-hwloc-dir=/X/root/usr/<wbr>local/hwloc-1.11.9 --with-blaslapack-dir=/<br>
okyanus/progs/intel/compilers_<wbr>and_libraries_2017.0.098/linu/<br>
X/mkl/lib/intel64<br>
> ./dtest_pdslin on a  named s034 by afarea Mon Apr 30 05:29:53 2018<br>
> [3]PETSC ERROR: Configure options PETSC_DIR=/X/petsc<br>
prefi/X=/X/petsc/petsc-install PETSC_ARCH=arch-real --with-debugging=0<br>
--with-cc=/okyanus/progs/<wbr>openmpi/openmpi-3.0.0-gcc-7.1.<wbr>0/bin/mpicc<br>
--with-c/X/X=/okyanus/progs/<wbr>openmpi/openmpi-3.0.0-gcc-7.1.<wbr>0/bin/mpic/X/X<br>
--with-fc=/okyanus/progs/<wbr>openmpi/openmpi-3.0.0-gcc-7.1.<wbr>0/bin/mpif90<br>
--with-valgrind=1 --with-valgrind-dir=/X/root/<wbr>usr/local/valgrind-3.13.0<br>
--with-hwloc-dir=/X/root/usr/<wbr>local/hwloc-1.11.9 --with-blaslapack-dir=/<br>
okyanus/progs/intel/compilers_<wbr>and_libraries_2017.0.098/linu/<br>
X/mkl/lib/intel64<br>
> [3]PETSC ERROR: #1 User provided function() line 0 in  unknown file<br>
> [9]PETSC ERROR: --------------------- Error Message<br>
------------------------------<wbr>------------------------------<wbr>--<br>
> [9]PETSC ERROR: Signal received<br>
> [9]PETSC ERROR: See <a href="http://www.mcs.anl.gov/petsc/documentation/faq.html" rel="noreferrer" target="_blank">http://www.mcs.anl.gov/petsc/<wbr>documentation/faq.html</a><br>
for trouble shooting.<br>
> [9]PETSC ERROR: Petsc Release Version 3.9.0, unknown<br>
> [9]PETSC ERROR: ./dtest_pdslin on a  named s044 by afarea Mon Apr 30<br>
05:29:53 2018<br>
> [9]PETSC ERROR: Configure options PETSC_DIR=/X/petsc<br>
prefi/X=/X/petsc/petsc-install PETSC_ARCH=arch-real --with-debugging=0<br>
--with-cc=/okyanus/progs/<wbr>openmpi/openmpi-3.0.0-gcc-7.1.<wbr>0/bin/mpicc<br>
--with-c/X/X=/okyanus/progs/<wbr>openmpi/openmpi-3.0.0-gcc-7.1.<wbr>0/bin/mpic/X/X<br>
--with-fc=/okyanus/progs/<wbr>openmpi/openmpi-3.0.0-gcc-7.1.<wbr>0/bin/mpif90<br>
--with-valgrind=1 --with-valgrind-dir=/X/root/<wbr>usr/local/valgrind-3.13.0<br>
--with-hwloc-dir=/X/root/usr/<wbr>local/hwloc-1.11.9 --with-blaslapack-dir=/<br>
okyanus/progs/intel/compilers_<wbr>and_libraries_2017.0.098/linu/<br>
X/mkl/lib/intel64<br>
> [7]PETSC ERROR: --------------------- Error Message<br>
------------------------------<wbr>------------------------------<wbr>--<br>
> [7]PETSC ERROR: Signal received<br>
> [7]PETSC ERROR: See <a href="http://www.mcs.anl.gov/petsc/documentation/faq.html" rel="noreferrer" target="_blank">http://www.mcs.anl.gov/petsc/<wbr>documentation/faq.html</a><br>
for trouble shooting.<br>
> [7]PETSC ERROR: Petsc Release Version 3.9.0, unknown<br>
> [7]PETSC ERROR: ./dtest_pdslin on a  named s036 by afarea Mon Apr 30<br>
05:29:53 2018<br>
> [7]PETSC ERROR: Configure options PETSC_DIR=/X/petsc<br>
prefi/X=/X/petsc/petsc-install PETSC_ARCH=arch-real --with-debugging=0<br>
--with-cc=/okyanus/progs/<wbr>openmpi/openmpi-3.0.0-gcc-7.1.<wbr>0/bin/mpicc<br>
--with-c/X/X=/okyanus/progs/<wbr>openmpi/openmpi-3.0.0-gcc-7.1.<wbr>0/bin/mpic/X/X<br>
--with-fc=/okyanus/progs/<wbr>openmpi/openmpi-3.0.0-gcc-7.1.<wbr>0/bin/mpif90<br>
--with-valgrind=1 --with-valgrind-dir=/X/root/<wbr>usr/local/valgrind-3.13.0<br>
--with-hwloc-dir=/X/root/usr/<wbr>local/hwloc-1.11.9 --with-blaslapack-dir=/<br>
okyanus/progs/intel/compilers_<wbr>and_libraries_2017.0.098/linu/<br>
X/mkl/lib/intel64<br>
> [7]PETSC ERROR: #1 User provided function() line 0 in  unknown file<br>
> ./dtest_pdslin on a  named s035 by afarea Mon Apr 30 05:29:53 2018<br>
> [5]PETSC ERROR: Configure options PETSC_DIR=/X/petsc<br>
prefi/X=/X/petsc/petsc-install PETSC_ARCH=arch-real --with-debugging=0<br>
--with-cc=/okyanus/progs/<wbr>openmpi/openmpi-3.0.0-gcc-7.1.<wbr>0/bin/mpicc<br>
--with-c/X/X=/okyanus/progs/<wbr>openmpi/openmpi-3.0.0-gcc-7.1.<wbr>0/bin/mpic/X/X<br>
--with-fc=/okyanus/progs/<wbr>openmpi/openmpi-3.0.0-gcc-7.1.<wbr>0/bin/mpif90<br>
--with-valgrind=1 --with-valgrind-dir=/X/root/<wbr>usr/local/valgrind-3.13.0<br>
--with-hwloc-dir=/X/root/usr/<wbr>local/hwloc-1.11.9 --with-blaslapack-dir=/<br>
okyanus/progs/intel/compilers_<wbr>and_libraries_2017.0.098/linu/<br>
X/mkl/lib/intel64<br>
> [5]PETSC ERROR: #1 User provided function() line 0 in  unknown file<br>
> configure using --with-debugging=yes, recompile, link, and run<br>
> [15]PETSC ERROR: to get more information on the crash.<br>
> [15]PETSC ERROR: --------------------- Error Message<br>
------------------------------<wbr>------------------------------<wbr>--<br>
> [15]PETSC ERROR: Signal received<br>
> [15]PETSC ERROR: See <a href="http://www.mcs.anl.gov/petsc/documentation/faq.html" rel="noreferrer" target="_blank">http://www.mcs.anl.gov/petsc/<wbr>documentation/faq.html</a><br>
for trouble shooting.<br>
> [15]PETSC ERROR: Petsc Release Version 3.9.0, unknown<br>
> [15]PETSC ERROR: ./dtest_pdslin on a  named s071 by afarea Mon Apr 30<br>
05:29:53 2018<br>
> [13]PETSC ERROR: #1 User provided function() line 0 in  unknown file<br>
> [11]PETSC ERROR: #1 User provided function() line 0 in  unknown file<br>
> [9]PETSC ERROR: #1 User provided function() line 0 in  unknown file<br>
> [15]PETSC ERROR: Configure options PETSC_DIR=/X/petsc<br>
prefi/X=/X/petsc/petsc-install PETSC_ARCH=arch-real --with-debugging=0<br>
--with-cc=/okyanus/progs/<wbr>openmpi/openmpi-3.0.0-gcc-7.1.<wbr>0/bin/mpicc<br>
--with-c/X/X=/okyanus/progs/<wbr>openmpi/openmpi-3.0.0-gcc-7.1.<wbr>0/bin/mpic/X/X<br>
--with-fc=/okyanus/progs/<wbr>openmpi/openmpi-3.0.0-gcc-7.1.<wbr>0/bin/mpif90<br>
--with-valgrind=1 --with-valgrind-dir=/X/root/<wbr>usr/local/valgrind-3.13.0<br>
--with-hwloc-dir=/X/root/usr/<wbr>local/hwloc-1.11.9 --with-blaslapack-dir=/<br>
okyanus/progs/intel/compilers_<wbr>and_libraries_2017.0.098/linu/<br>
X/mkl/lib/intel64<br>
> [15]PETSC ERROR: #1 User provided function() line 0 in  unknown file<br>
> [1]PETSC ERROR: Signal received<br>
> [1]PETSC ERROR: See <a href="http://www.mcs.anl.gov/petsc/documentation/faq.html" rel="noreferrer" target="_blank">http://www.mcs.anl.gov/petsc/<wbr>documentation/faq.html</a><br>
for trouble shooting.<br>
> [1]PETSC ERROR: Petsc Release Version 3.9.0, unknown<br>
> [1]PETSC ERROR: ./dtest_pdslin on a  named f002 by afarea Mon Apr 30<br>
05:29:53 2018<br>
> [1]PETSC ERROR: Configure options PETSC_DIR=/X/petsc<br>
prefi/X=/X/petsc/petsc-install PETSC_ARCH=arch-real --with-debugging=0<br>
--with-cc=/okyanus/progs/<wbr>openmpi/openmpi-3.0.0-gcc-7.1.<wbr>0/bin/mpicc<br>
--with-c/X/X=/okyanus/progs/<wbr>openmpi/openmpi-3.0.0-gcc-7.1.<wbr>0/bin/mpic/X/X<br>
--with-fc=/okyanus/progs/<wbr>openmpi/openmpi-3.0.0-gcc-7.1.<wbr>0/bin/mpif90<br>
--with-valgrind=1 --with-valgrind-dir=/X/root/<wbr>usr/local/valgrind-3.13.0<br>
--with-hwloc-dir=/X/root/usr/<wbr>local/hwloc-1.11.9 --with-blaslapack-dir=/<br>
okyanus/progs/intel/compilers_<wbr>and_libraries_2017.0.098/linu/<br>
X/mkl/lib/intel64<br>
> [1]PETSC ERROR: #1 User provided function() line 0 in  unknown file<br>
> [1]PETSC ERROR: See <a href="http://www.mcs.anl.gov/petsc/documentation/faq.html" rel="noreferrer" target="_blank">http://www.mcs.anl.gov/petsc/<wbr>documentation/faq.html</a><br>
for trouble shooting.<br>
> [1]PETSC ERROR: Petsc Release Version 3.9.0, unknown<br>
> [1]PETSC ERROR: ./dtest_pdslin on a  named f002 by afarea Mon Apr 30<br>
05:29:53 2018<br>
> [1]PETSC ERROR: Configure options PETSC_DIR=/X/petsc<br>
prefi/X=/X/petsc/petsc-install PETSC_ARCH=arch-real --with-debugging=0<br>
--with-cc=/okyanus/progs/<wbr>openmpi/openmpi-3.0.0-gcc-7.1.<wbr>0/bin/mpicc<br>
--with-c/X/X=/okyanus/progs/<wbr>openmpi/openmpi-3.0.0-gcc-7.1.<wbr>0/bin/mpic/X/X<br>
--with-fc=/okyanus/progs/<wbr>openmpi/openmpi-3.0.0-gcc-7.1.<wbr>0/bin/mpif90<br>
--with-valgrind=1 --with-valgrind-dir=/X/root/<wbr>usr/local/valgrind-3.13.0<br>
--with-hwloc-dir=/X/root/usr/<wbr>local/hwloc-1.11.9 --with-blaslapack-dir=/<br>
okyanus/progs/intel/compilers_<wbr>and_libraries_2017.0.098/linu/<br>
X/mkl/lib/intel64<br>
> [1]PETSC ERROR: #1 User provided function() line 0 in  unknown file<br>
> [6]PETSC ERROR: ------------------------------<br>
------------------------------<wbr>------------<br>
> [6]PETSC ERROR: Caught signal number 15 Terminate: Some process (or the<br>
batch system) has told this process to end<br>
> [6]PETSC ERROR: Try option -start_in_debugger or -on_error_attach_debugger<br>
> [6]PETSC ERROR: or see <a href="http://www.mcs.anl.gov/petsc/" rel="noreferrer" target="_blank">http://www.mcs.anl.gov/petsc/</a><br>
documentation/faq.html#<wbr>valgrind<br>
> [6]PETSC ERROR: or try <a href="http://valgrind.org" rel="noreferrer" target="_blank">http://valgrind.org</a> on GNU/linu/X and Apple Mac OS<br>
/X to find memory corruption errors<br>
> [6]PETSC ERROR: configure using --with-debugging=yes, recompile, link,<br>
and run<br>
> [6]PETSC ERROR: to get more information on the crash.<br>
> [6]PETSC ERROR: --------------------- Error Message<br>
------------------------------<wbr>------------------------------<wbr>--<br>
> [6]PETSC ERROR: Signal received<br>
> [6]PETSC ERROR: See <a href="http://www.mcs.anl.gov/petsc/documentation/faq.html" rel="noreferrer" target="_blank">http://www.mcs.anl.gov/petsc/<wbr>documentation/faq.html</a><br>
for trouble shooting.<br>
> [6]PETSC ERROR: Petsc Release Version 3.9.0, unknown<br>
> [6]PETSC ERROR: ./dtest_pdslin on a  named s036 by afarea Mon Apr 30<br>
05:29:53 2018<br>
> [6]PETSC ERROR: Configure options PETSC_DIR=/X/petsc<br>
prefi/X=/X/petsc/petsc-install PETSC_ARCH=arch-real --with-debugging=0<br>
--with-cc=/okyanus/progs/<wbr>openmpi/openmpi-3.0.0-gcc-7.1.<wbr>0/bin/mpicc<br>
--with-c/X/X=/okyanus/progs/<wbr>openmpi/openmpi-3.0.0-gcc-7.1.<wbr>0/bin/mpic/X/X<br>
--with-fc=/okyanus/progs/<wbr>openmpi/openmpi-3.0.0-gcc-7.1.<wbr>0/bin/mpif90<br>
--with-valgrind=1 --with-valgrind-dir=/X/root/<wbr>usr/local/valgrind-3.13.0<br>
--with-hwloc-dir=/X/root/usr/<wbr>local/hwloc-1.11.9 --with-blaslapack-dir=/<br>
okyanus/progs/intel/compilers_<wbr>and_libraries_2017.0.098/linu/<br>
X/mkl/lib/intel64<br>
> [6]PETSC ERROR: #1 User provided function() line 0 in  unknown file<br>
> [4]PETSC ERROR: ------------------------------<br>
------------------------------<wbr>------------<br>
> [4]PETSC ERROR: Caught signal number 15 Terminate: Some process (or the<br>
batch system) has told this process to end<br>
> [4]PETSC ERROR: Try option -start_in_debugger or -on_error_attach_debugger<br>
> [4]PETSC ERROR: or see <a href="http://www.mcs.anl.gov/petsc/" rel="noreferrer" target="_blank">http://www.mcs.anl.gov/petsc/</a><br>
documentation/faq.html#<wbr>valgrind<br>
> [4]PETSC ERROR: or try <a href="http://valgrind.org" rel="noreferrer" target="_blank">http://valgrind.org</a> on GNU/linu/X and Apple Mac OS<br>
/X to find memory corruption errors<br>
> [4]PETSC ERROR: configure using --with-debugging=yes, recompile, link,<br>
and run<br>
> [4]PETSC ERROR: to get more information on the crash.<br>
> [4]PETSC ERROR: --------------------- Error Message<br>
------------------------------<wbr>------------------------------<wbr>--<br>
> [4]PETSC ERROR: Signal received<br>
> [4]PETSC ERROR: See <a href="http://www.mcs.anl.gov/petsc/documentation/faq.html" rel="noreferrer" target="_blank">http://www.mcs.anl.gov/petsc/<wbr>documentation/faq.html</a><br>
for trouble shooting.<br>
> [4]PETSC ERROR: Petsc Release Version 3.9.0, unknown<br>
> [4]PETSC ERROR: ./dtest_pdslin on a  named s035 by afarea Mon Apr 30<br>
05:29:53 2018<br>
> [4]PETSC ERROR: Petsc Release Version 3.9.0, unknown<br>
> [4]PETSC ERROR: ./dtest_pdslin on a  named s035 by afarea Mon Apr 30<br>
05:29:53 2018<br>
> [4]PETSC ERROR: Configure options PETSC_DIR=/X/petsc<br>
prefi/X=/X/petsc/petsc-install PETSC_ARCH=arch-real --with-debugging=0<br>
--with-cc=/okyanus/progs/<wbr>openmpi/openmpi-3.0.0-gcc-7.1.<wbr>0/bin/mpicc<br>
--with-c/X/X=/okyanus/progs/<wbr>openmpi/openmpi-3.0.0-gcc-7.1.<wbr>0/bin/mpic/X/X<br>
--with-fc=/okyanus/progs/<wbr>openmpi/openmpi-3.0.0-gcc-7.1.<wbr>0/bin/mpif90<br>
--with-valgrind=1 --with-valgrind-dir=/X/root/<wbr>usr/local/valgrind-3.13.0<br>
--with-hwloc-dir=/X/root/usr/<wbr>local/hwloc-1.11.9 --with-blaslapack-dir=/<br>
okyanus/progs/intel/compilers_<wbr>and_libraries_2017.0.098/linu/<br>
X/mkl/lib/intel64<br>
> [4]PETSC ERROR: #1 User provided function() line 0 in  unknown file<br>
> [0]PETSC ERROR: ------------------------------<br>
------------------------------<wbr>------------<br>
> [0]PETSC ERROR: Caught signal number 15 Terminate: Some process (or the<br>
batch system) has told this process to end<br>
> [0]PETSC ERROR: Try option -start_in_debugger or -on_error_attach_debugger<br>
> [0]PETSC ERROR: or see <a href="http://www.mcs.anl.gov/petsc/" rel="noreferrer" target="_blank">http://www.mcs.anl.gov/petsc/</a><br>
documentation/faq.html#<wbr>valgrind<br>
> [0]PETSC ERROR: or try <a href="http://valgrind.org" rel="noreferrer" target="_blank">http://valgrind.org</a> on GNU/linu/X and Apple Mac OS<br>
/X to find memory corruption errors<br>
> [0]PETSC ERROR: configure using --with-debugging=yes, recompile, link,<br>
and run<br>
> [0]PETSC ERROR: to get more information on the crash.<br>
> [0]PETSC ERROR: --------------------- Error Message<br>
------------------------------<wbr>------------------------------<wbr>--<br>
> [0]PETSC ERROR: Signal received<br>
> [0]PETSC ERROR: See <a href="http://www.mcs.anl.gov/petsc/documentation/faq.html" rel="noreferrer" target="_blank">http://www.mcs.anl.gov/petsc/<wbr>documentation/faq.html</a><br>
for trouble shooting.<br>
> [0]PETSC ERROR: Petsc Release Version 3.9.0, unknown<br>
> [0]PETSC ERROR: ./dtest_pdslin on a  named f002 by afarea Mon Apr 30<br>
05:29:53 2018<br>
> [0]PETSC ERROR: Configure options PETSC_DIR=/X/petsc<br>
prefi/X=/X/petsc/petsc-install PETSC_ARCH=arch-real --with-debugging=0<br>
--with-cc=/okyanus/progs/<wbr>openmpi/openmpi-3.0.0-gcc-7.1.<wbr>0/bin/mpicc<br>
--with-c/X/X=/okyanus/progs/<wbr>openmpi/openmpi-3.0.0-gcc-7.1.<wbr>0/bin/mpic/X/X<br>
--with-fc=/okyanus/progs/<wbr>openmpi/openmpi-3.0.0-gcc-7.1.<wbr>0/bin/mpif90<br>
--with-valgrind=1 --with-valgrind-dir=/X/root/<wbr>usr/local/valgrind-3.13.0<br>
--with-hwloc-dir=/X/root/usr/<wbr>local/hwloc-1.11.9 --with-blaslapack-dir=/<br>
okyanus/progs/intel/compilers_<wbr>and_libraries_2017.0.098/linu/<br>
X/mkl/lib/intel64<br>
> [0]PETSC ERROR: #1 User provided function() line 0 in  unknown file<br>
> [10]PETSC ERROR: ------------------------------<br>
------------------------------<wbr>------------<br>
> [10]PETSC ERROR: Caught signal number 15 Terminate: Some process (or the<br>
batch system) has told this process to end<br>
> [10]PETSC ERROR: Try option -start_in_debugger or<br>
-on_error_attach_debugger<br>
> [10]PETSC ERROR: or see <a href="http://www.mcs.anl.gov/petsc/" rel="noreferrer" target="_blank">http://www.mcs.anl.gov/petsc/</a><br>
documentation/faq.html#<wbr>valgrind<br>
> [10]PETSC ERROR: or try <a href="http://valgrind.org" rel="noreferrer" target="_blank">http://valgrind.org</a> on GNU/linu/X and Apple Mac<br>
OS /X to find memory corruption errors<br>
> [10]PETSC ERROR: configure using --with-debugging=yes, recompile, link,<br>
and run<br>
> [10]PETSC ERROR: to get more information on the crash.<br>
> [10]PETSC ERROR: --------------------- Error Message<br>
------------------------------<wbr>------------------------------<wbr>--<br>
> [10]PETSC ERROR: Signal received<br>
> [10]PETSC ERROR: See <a href="http://www.mcs.anl.gov/petsc/documentation/faq.html" rel="noreferrer" target="_blank">http://www.mcs.anl.gov/petsc/<wbr>documentation/faq.html</a><br>
for trouble shooting.<br>
> [10]PETSC ERROR: Petsc Release Version 3.9.0, unknown<br>
> [10]PETSC ERROR: ./dtest_pdslin on a  named s054 by afarea Mon Apr 30<br>
05:29:53 2018<br>
><br>
> [8]PETSC ERROR: ./dtest_pdslin on a  named s044 by afarea Mon Apr 30<br>
05:29:53 2018<br>
> [8]PETSC ERROR: Configure options PETSC_DIR=/X/petsc<br>
prefi/X=/X/petsc/petsc-install PETSC_ARCH=arch-real --with-debugging=0<br>
--with-cc=/okyanus/progs/<wbr>openmpi/openmpi-3.0.0-gcc-7.1.<wbr>0/bin/mpicc<br>
--with-c/X/X=/okyanus/progs/<wbr>openmpi/openmpi-3.0.0-gcc-7.1.<wbr>0/bin/mpic/X/X<br>
--with-fc=/okyanus/progs/<wbr>openmpi/openmpi-3.0.0-gcc-7.1.<wbr>0/bin/mpif90<br>
--with-valgrind=1 --with-valgrind-dir=/X/root/<wbr>usr/local/valgrind-3.13.0<br>
--with-hwloc-dir=/X/root/usr/<wbr>local/hwloc-1.11.9 --with-blaslapack-dir=/<br>
okyanus/progs/intel/compilers_<wbr>and_libraries_2017.0.098/linu/<br>
X/mkl/lib/intel64<br>
> [8]PETSC ERROR: #1 User provided function() line 0 in  unknown file<br>
> [14]PETSC ERROR: ------------------------------<br>
------------------------------<wbr>------------<br>
> [14]PETSC ERROR: Caught signal number 15 Terminate: Some process (or the<br>
batch system) has told this process to end<br>
> [14]PETSC ERROR: Try option -start_in_debugger or<br>
-on_error_attach_debugger<br>
> [14]PETSC ERROR: or see <a href="http://www.mcs.anl.gov/petsc/" rel="noreferrer" target="_blank">http://www.mcs.anl.gov/petsc/</a><br>
documentation/faq.html#<wbr>valgrind<br>
> [14]PETSC ERROR: or try <a href="http://valgrind.org" rel="noreferrer" target="_blank">http://valgrind.org</a> on GNU/linu/X and Apple Mac<br>
OS /X to find memory corruption errors<br>
> [14]PETSC ERROR: configure using --with-debugging=yes, recompile, link,<br>
and run<br>
> [14]PETSC ERROR: to get more information on the crash.<br>
> [14]PETSC ERROR: --------------------- Error Message<br>
------------------------------<wbr>------------------------------<wbr>--<br>
> [14]PETSC ERROR: Signal received<br>
> [14]PETSC ERROR: See <a href="http://www.mcs.anl.gov/petsc/documentation/faq.html" rel="noreferrer" target="_blank">http://www.mcs.anl.gov/petsc/<wbr>documentation/faq.html</a><br>
for trouble shooting.<br>
> [14]PETSC ERROR: Petsc Release Version 3.9.0, unknown<br>
> [14]PETSC ERROR: ./dtest_pdslin on a  named s071 by afarea Mon Apr 30<br>
05:29:53 2018<br>
> [14]PETSC ERROR: Configure options PETSC_DIR=/X/petsc<br>
prefi/X=/X/petsc/petsc-install PETSC_ARCH=arch-real --with-debugging=0<br>
--with-cc=/okyanus/progs/<wbr>openmpi/openmpi-3.0.0-gcc-7.1.<wbr>0/bin/mpicc<br>
--with-c/X/X=/okyanus/progs/<wbr>openmpi/openmpi-3.0.0-gcc-7.1.<wbr>0/bin/mpic/X/X<br>
--with-fc=/okyanus/progs/<wbr>openmpi/openmpi-3.0.0-gcc-7.1.<wbr>0/bin/mpif90<br>
--with-valgrind=1 --with-valgrind-dir=/X/root/<wbr>usr/local/valgrind-3.13.0<br>
--with-hwloc-dir=/X/root/usr/<wbr>local/hwloc-1.11.9 --with-blaslapack-dir=/<br>
okyanus/progs/intel/compilers_<wbr>and_libraries_2017.0.098/linu/<br>
X/mkl/lib/intel64<br>
> [14]PETSC ERROR: #1 User provided function() line 0 in  unknown file<br>
> [15]PETSC ERROR: ------------------------------<br>
------------------------------<wbr>------------<br>
> [15]PETSC ERROR: Caught signal number 15 Terminate: Some process (or the<br>
batch system) has told this process to end<br>
> [15]PETSC ERROR: Try option -start_in_debugger or<br>
-on_error_attach_debugger<br>
> [15]PETSC ERROR: or see <a href="http://www.mcs.anl.gov/petsc/" rel="noreferrer" target="_blank">http://www.mcs.anl.gov/petsc/</a><br>
documentation/faq.html#<wbr>valgrind<br>
> [15]PETSC ERROR: or try <a href="http://valgrind.org" rel="noreferrer" target="_blank">http://valgrind.org</a> on GNU/linu/X and Apple Mac<br>
OS /X to find memory corruption errors<br>
> [15]PETSC ERROR: configure using --with-debugging=yes, recompile, link,<br>
and run<br>
> [15]PETSC ERROR: to get more information on the crash.<br>
> [15]PETSC ERROR: --------------------- Error Message<br>
------------------------------<wbr>------------------------------<wbr>--<br>
> [15]PETSC ERROR: Signal received<br>
> [15]PETSC ERROR: See <a href="http://www.mcs.anl.gov/petsc/documentation/faq.html" rel="noreferrer" target="_blank">http://www.mcs.anl.gov/petsc/<wbr>documentation/faq.html</a><br>
for trouble shooting.<br>
> [15]PETSC ERROR: Petsc Release Version 3.9.0, unknown<br>
> [15]PETSC ERROR: ./dtest_pdslin on a  named s071 by afarea Mon Apr 30<br>
05:29:53 2018<br>
> [15]PETSC ERROR: #2 User provided function() line 0 in  unknown file<br>
> [2]PETSC ERROR: ------------------------------<br>
------------------------------<wbr>------------<br>
> [2]PETSC ERROR: Caught signal number 15 Terminate: Some process (or the<br>
batch system) has told this process to end<br>
> [2]PETSC ERROR: Try option -start_in_debugger or -on_error_attach_debugger<br>
> [2]PETSC ERROR: or see <a href="http://www.mcs.anl.gov/petsc/" rel="noreferrer" target="_blank">http://www.mcs.anl.gov/petsc/</a><br>
documentation/faq.html#<wbr>valgrind<br>
> [2]PETSC ERROR: or try <a href="http://valgrind.org" rel="noreferrer" target="_blank">http://valgrind.org</a> on GNU/linu/X and Apple Mac OS<br>
/X to find memory corruption errors<br>
> [2]PETSC ERROR: configure using --with-debugging=yes, recompile, link,<br>
and run<br>
> [2]PETSC ERROR: to get more information on the crash.<br>
> [2]PETSC ERROR: --------------------- Error Message<br>
------------------------------<wbr>------------------------------<wbr>--<br>
> [2]PETSC ERROR: Signal received<br>
> [2]PETSC ERROR: See <a href="http://www.mcs.anl.gov/petsc/documentation/faq.html" rel="noreferrer" target="_blank">http://www.mcs.anl.gov/petsc/<wbr>documentation/faq.html</a><br>
for trouble shooting.<br>
> [2]PETSC ERROR: Petsc Release Version 3.9.0, unknown<br>
> [2]PETSC ERROR: ./dtest_pdslin on a  named s034 by afarea Mon Apr 30<br>
05:29:53 2018<br>
> [2]PETSC ERROR: Configure options PETSC_DIR=/X/petsc<br>
prefi/X=/X/petsc/petsc-install PETSC_ARCH=arch-real --with-debugging=0<br>
--with-cc=/okyanus/progs/<wbr>openmpi/openmpi-3.0.0-gcc-7.1.<wbr>0/bin/mpicc<br>
--with-c/X/X=/okyanus/progs/<wbr>openmpi/openmpi-3.0.0-gcc-7.1.<wbr>0/bin/mpic/X/X<br>
--with-fc=/okyanus/progs/<wbr>openmpi/openmpi-3.0.0-gcc-7.1.<wbr>0/bin/mpif90<br>
--with-valgrind=1 --with-valgrind-dir=/X/root/<wbr>usr/local/valgrind-3.13.0<br>
--with-hwloc-dir=/X/root/usr/<wbr>local/hwloc-1.11.9 --with-blaslapack-dir=/<br>
okyanus/progs/intel/compilers_<wbr>and_libraries_2017.0.098/linu/<br>
X/mkl/lib/intel64<br>
> [2]PETSC ERROR: #1 User provided function() line 0 in  unknown file<br>
> [3]PETSC ERROR: ------------------------------<br>
------------------------------<wbr>------------<br>
> [3]PETSC ERROR: Caught signal number 15 Terminate: Some process (or the<br>
batch system) has told this process to end<br>
> [3]PETSC ERROR: Try option -start_in_debugger or -on_error_attach_debugger<br>
> [3]PETSC ERROR: or see <a href="http://www.mcs.anl.gov/petsc/" rel="noreferrer" target="_blank">http://www.mcs.anl.gov/petsc/</a><br>
documentation/faq.html#<wbr>valgrind<br>
> [3]PETSC ERROR: or try <a href="http://valgrind.org" rel="noreferrer" target="_blank">http://valgrind.org</a> on GNU/linu/X and Apple Mac OS<br>
/X to find memory corruption errors<br>
> [3]PETSC ERROR: configure using --with-debugging=yes, recompile, link,<br>
and run<br>
> [3]PETSC ERROR: to get more information on the crash.<br>
> [3]PETSC ERROR: --------------------- Error Message<br>
------------------------------<wbr>------------------------------<wbr>--<br>
> [3]PETSC ERROR: Signal received<br>
> [3]PETSC ERROR: See <a href="http://www.mcs.anl.gov/petsc/documentation/faq.html" rel="noreferrer" target="_blank">http://www.mcs.anl.gov/petsc/<wbr>documentation/faq.html</a><br>
for trouble shooting.<br>
> [3]PETSC ERROR: Petsc Release Version 3.9.0, unknown<br>
> [3]PETSC ERROR: ./dtest_pdslin on a  named s034 by afarea Mon Apr 30<br>
05:29:53 2018<br>
> [3]PETSC ERROR: Configure options PETSC_DIR=/X/petsc<br>
prefi/X=/X/petsc/petsc-install PETSC_ARCH=arch-real --with-debugging=0<br>
--with-cc=/okyanus/progs/<wbr>openmpi/openmpi-3.0.0-gcc-7.1.<wbr>0/bin/mpicc<br>
--with-c/X/X=/okyanus/progs/<wbr>openmpi/openmpi-3.0.0-gcc-7.1.<wbr>0/bin/mpic/X/X<br>
--with-fc=/okyanus/progs/<wbr>openmpi/openmpi-3.0.0-gcc-7.1.<wbr>0/bin/mpif90<br>
--with-valgrind=1 --with-valgrind-dir=/X/root/<wbr>usr/local/valgrind-3.13.0<br>
--with-hwloc-dir=/X/root/usr/<wbr>local/hwloc-1.11.9 --with-blaslapack-dir=/<br>
okyanus/progs/intel/compilers_<wbr>and_libraries_2017.0.098/linu/<br>
X/mkl/lib/intel64<br>
> [3]PETSC ERROR: #2 User provided function() line 0 in  unknown file<br>
> [f002:38724] 17 more processes have sent help message help-mpi-api.t/Xt /<br>
mpi-abort<br>
> [f002:38724] Set MCA parameter "orte_base_help_aggregate" to 0 to see all<br>
help / error messages<br>
><br>
><br>
> <Paudik_8_2_16.100234.out><br>
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------------------------------<br>
<br>
Subject: Digest Footer<br>
<br>
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------------------------------<br>
<br>
End of petsc-users Digest, Vol 112, Issue 141<br>
******************************<wbr>***************<br>
</blockquote></div><br></div>