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<p>Satish, Gaetan, thanks for your suggestions. I've decided not to<br>
use cmake for cgns, and that works fine with petsc's build of<br>
hdf5.</p>
<p><br>
</p>
<p>Chris<br>
</p>
<div style="color: rgb(33, 33, 33);"></div>
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<font style="font-family:Verdana;font-size:8pt;color:#7D7D7D;font-weight:bold;">dr. ir.</font><font style="font-family:Verdana;font-size:8pt;color:#7D7D7D;font-weight:bold;">
</font><font style="font-family: Verdana;font-size:8pt;color:#7D7D7D;font-weight:bold;">Christiaan</font><font style="font-family: Verdana;font-size:8pt;color:#7D7D7D;font-weight:bold;">
</font><font style="font-family:Verdana;font-size:8pt;color:#7D7D7D;font-weight:bold;">Klaij</font><font size="3" face="Segoe UI"></font><font style="font-family:Verdana;font-size:8pt;color:#7D7D7D;font-weight:bold;"> |
</font><font style="font-family:Verdana;font-size:8pt;color:#7D7D7D;font-weight:bold;">Senior Researcher</font><font style="font-family:Verdana;font-size:8pt;color:#7D7D7D;font-weight:bold;"> |
</font><font style="font-family:Verdana;font-size:8pt;color:#7D7D7D;font-weight:bold;">Research & Development</font><br>
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<div id="divRplyFwdMsg" dir="ltr"><font style="font-size:11pt" face="Calibri, sans-serif" color="#000000"><b>From:</b> Gaetan Kenway <gaetank@gmail.com><br>
<b>Sent:</b> Thursday, March 29, 2018 6:43 PM<br>
<b>To:</b> petsc-users<br>
<b>Cc:</b> Klaij, Christiaan<br>
<b>Subject:</b> Re: [petsc-users] --download-hdf5 and then compiling cgns</font>
<div> </div>
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<div dir="ltr">I have compiled CGNS3.3 with hdf from PETSc but not using cmake from CGNS. Here is what I used:
<div>
<div><br>
</div>
<div>git clone <a href="https://github.com/CGNS/CGNS.git">https://github.com/CGNS/CGNS.git</a></div>
<div><br>
</div>
<div>cd CGNS/src</div>
<div>export CC=mpicc</div>
<div>export FC=mpif90</div>
<div>export FCFLAGS='-fPIC -O3'</div>
<div>export CFLAGS='-fPIC -O3'</div>
<div>export LIBS='-lz -ldl'</div>
<div><br>
</div>
<div>./configure --with-hdf5=$PETSC_DIR/$PETSC_ARCH --enable-64bit --prefix=/u/wk/gkenway/.local --enable-parallel --enable-cgnstools=yes --enable-shared</div>
<div>make -j 10</div>
</div>
<div><br>
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<div>Hope that helps</div>
<div>Gaetan</div>
</div>
<div class="gmail_extra"><br>
<div class="gmail_quote">On Thu, Mar 29, 2018 at 9:37 AM, Satish Balay <span dir="ltr">
<<a href="mailto:balay@mcs.anl.gov" target="_blank">balay@mcs.anl.gov</a>></span> wrote:<br>
<blockquote class="gmail_quote" style="margin:0 0 0 .8ex; border-left:1px #ccc solid; padding-left:1ex">
--download-hdf5 uses 'autoconf' build of hdf5 - and not cmake<br>
build. [hdf5 provides both build tools].<br>
<br>
This must be the reason why hdf5Config.cmake and hdf5-config.cmake<br>
files might be missing.<br>
<br>
You might be able to install hdf5 manually with cmake - and then build<br>
cgns-3.3.1 with it.<br>
<span class="HOEnZb"><font color="#888888"><br>
Satish<br>
</font></span>
<div class="HOEnZb">
<div class="h5"><br>
<br>
On Thu, 29 Mar 2018, Klaij, Christiaan wrote:<br>
<br>
> Satish,<br>
><br>
> I've build petsc-3.8.3 with --download-hdf5 and this works<br>
> fine. Now, I'm trying to compile cgns-3.3.1 and have it use the<br>
> hdf5 library from petsc. Therefore, in the cmake configure I have<br>
> set this option<br>
><br>
> -D HDF5_DIR=/path/to/petsc/hdf5<br>
><br>
> but cmake gives this message:<br>
><br>
> CMake Warning at CMakeLists.txt:207 (find_package):<br>
> Could not find a package configuration file provided by "HDF5" with any of<br>
> the following names:<br>
><br>
> hdf5Config.cmake<br>
> hdf5-config.cmake<br>
><br>
> and then falls back to the system's hdf5. Indeed there are no<br>
> such files in /path/to/petsc/hdf5. Any idea on how to proceed<br>
> from here?<br>
><br>
> Chris<br>
><br>
><br>
> dr. ir. Christiaan Klaij | Senior Researcher | Research & Development<br>
> MARIN | T +31 317 49 33 44 | mailto:<a href="mailto:C.Klaij@marin.nl">C.Klaij@marin.nl</a> |
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