<html><head><meta http-equiv="Content-Type" content="text/html; charset=us-ascii"></head><body style="word-wrap: break-word; -webkit-nbsp-mode: space; line-break: after-white-space;" class=""><div class="">Thanks, Barry. </div><div class=""><br class=""></div><div class="">Does this also address the mumps compilation issue that I had shared in the same thread: </div><div class=""><br class=""></div><div class=""><div class="" style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);"><span class="" style="font-variant-ligatures: no-common-ligatures;">mumps_c.c:307:53: error: no member named 'nnz' in 'CMUMPS_STRUC_C'; did you mean 'nz'?</span></div><div class="" style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);"><span class="" style="font-variant-ligatures: no-common-ligatures;"> mumps_par->n=0; mumps_par->nz=0; mumps_par->nnz=0; mumps_par->nz_loc=0; mumps_par->nnz_loc=0; mumps_par->nelt=0;mumps_par->instance_number=0;mumps_par->deficiency=0;mumps_par->lwk_user=0;mumps_par->size_schur=0;mumps_par->lrhs=0; mumps_par->lredrhs=0; mumps_par->nrhs=0; mumps_par->nz_rhs=0; mumps_par->lsol_loc=0;</span></div><div class="" style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);"><span class="" style="font-variant-ligatures: no-common-ligatures;"> ^~~</span></div><div class="" style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);"><span class="" style="font-variant-ligatures: no-common-ligatures;"> nz</span></div><div class="" style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);"><span class="" style="font-variant-ligatures: no-common-ligatures;">/Users/manav/Documents/codes/numerical_lib/petsc/include/cmumps_c.h:56:20: note: 'nz' declared here</span></div><div class="" style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);"><span class="" style="font-variant-ligatures: no-common-ligatures;"> MUMPS_INT nz;</span></div><div class="" style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);"><span class="" style="font-variant-ligatures: no-common-ligatures;"> ^</span></div><div class="" style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);"><span class="" style="font-variant-ligatures: no-common-ligatures;">mumps_c.c:307:92: error: no member named 'nnz_loc' in 'CMUMPS_STRUC_C'; did you mean 'nz_loc'?</span></div><div class="" style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);"><span class="" style="font-variant-ligatures: no-common-ligatures;"> mumps_par->n=0; mumps_par->nz=0; mumps_par->nnz=0; mumps_par->nz_loc=0; mumps_par->nnz_loc=0; mumps_par->nelt=0;mumps_par->instance_number=0;mumps_par->deficiency=0;mumps_par->lwk_user=0;mumps_par->size_schur=0;mumps_par->lrhs=0; mumps_par->lredrhs=0; mumps_par->nrhs=0; mumps_par->nz_rhs=0; mumps_par->lsol_loc=0;</span></div><div class="" style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);"><span class="" style="font-variant-ligatures: no-common-ligatures;"> ^~~~~~~</span></div><div class="" style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);"><span class="" style="font-variant-ligatures: no-common-ligatures;"> nz_loc</span></div><div class="" style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);"><span class="" style="font-variant-ligatures: no-common-ligatures;">/Users/manav/Documents/codes/numerical_lib/petsc/include/cmumps_c.h:62:20: note: 'nz_loc' declared here</span></div><div class="" style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);"><span class="" style="font-variant-ligatures: no-common-ligatures;"> MUMPS_INT nz_loc;</span></div><div class="" style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);"><span class="" style="font-variant-ligatures: no-common-ligatures;"> ^</span></div><div class="" style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);"><span class="" style="font-variant-ligatures: no-common-ligatures;">mumps_c.c:419:42: error: no member named 'nnz' in 'CMUMPS_STRUC_C'; did you mean 'nz'?</span></div><div class="" style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);"><span class="" style="font-variant-ligatures: no-common-ligatures;"> &(mumps_par->nz), &(mumps_par->nnz), irn, &irn_avail, jcn, &jcn_avail, a, &a_avail,</span></div><div class="" style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);"><span class="" style="font-variant-ligatures: no-common-ligatures;"> ^~~</span></div><div class="" style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);"><span class="" style="font-variant-ligatures: no-common-ligatures;"> nz</span></div><div class="" style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);"><span class="" style="font-variant-ligatures: no-common-ligatures;">/Users/manav/Documents/codes/numerical_lib/petsc/include/cmumps_c.h:56:20: note: 'nz' declared here</span></div><div class="" style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);"><span class="" style="font-variant-ligatures: no-common-ligatures;"> MUMPS_INT nz;</span></div><div class="" style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);"><span class="" style="font-variant-ligatures: no-common-ligatures;"> ^</span></div><div class="" style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);"><span class="" style="font-variant-ligatures: no-common-ligatures;">mumps_c.c:420:46: error: no member named 'nnz_loc' in 'CMUMPS_STRUC_C'; did you mean 'nz_loc'?</span></div><div class="" style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);"><span class="" style="font-variant-ligatures: no-common-ligatures;"> &(mumps_par->nz_loc), &(mumps_par->nnz_loc), irn_loc, &irn_loc_avail, jcn_loc, &jcn_loc_avail,</span></div><div class="" style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);"><span class="" style="font-variant-ligatures: no-common-ligatures;"> ^~~~~~~</span></div><div class="" style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);"><span class="" style="font-variant-ligatures: no-common-ligatures;"> nz_loc</span></div><div class="" style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);"><span class="" style="font-variant-ligatures: no-common-ligatures;">/Users/manav/Documents/codes/numerical_lib/petsc/include/cmumps_c.h:62:20: note: 'nz_loc' declared here</span></div><div class="" style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);"><span class="" style="font-variant-ligatures: no-common-ligatures;"> MUMPS_INT nz_loc;</span></div><div class="" style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);"><span class="" style="font-variant-ligatures: no-common-ligatures;"> ^</span></div><div class="" style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);"><span class="" style="font-variant-ligatures: no-common-ligatures;">mumps_c.c:419:29: warning: incompatible pointer types passing 'int *' to parameter of type 'int64_t *' (aka 'long long *') [-Wincompatible-pointer-types]</span></div><div class="" style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);"><span class="" style="font-variant-ligatures: no-common-ligatures;"> &(mumps_par->nz), &(mumps_par->nnz), irn, &irn_avail, jcn, &jcn_avail, a, &a_avail,</span></div><div class="" style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);"><span class="" style="font-variant-ligatures: no-common-ligatures;"> ^~~~~~~~~~~~~~~~~</span></div><div class="" style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);"><span class="" style="font-variant-ligatures: no-common-ligatures;">mumps_c.c:99:28: note: passing argument to parameter 'nnz' here</span></div><div class="" style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);"><span class="" style="font-variant-ligatures: no-common-ligatures;"> MUMPS_INT8 *nnz,</span></div><div class="" style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);"><span class="" style="font-variant-ligatures: no-common-ligatures;"> ^</span></div><div class="" style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);"><span class="" style="font-variant-ligatures: no-common-ligatures;">mumps_c.c:420:33: warning: incompatible pointer types passing 'int *' to parameter of type 'int64_t *' (aka 'long long *') [-Wincompatible-pointer-types]</span></div><div class="" style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);"><span class="" style="font-variant-ligatures: no-common-ligatures;"> &(mumps_par->nz_loc), &(mumps_par->nnz_loc), irn_loc, &irn_loc_avail, jcn_loc, &jcn_loc_avail,</span></div><div class="" style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);"><span class="" style="font-variant-ligatures: no-common-ligatures;"> ^~~~~~~~~~~~~~~~~~~~~</span></div><div class="" style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);"><span class="" style="font-variant-ligatures: no-common-ligatures;">mumps_c.c:107:28: note: passing argument to parameter 'nnz_loc' here</span></div><div class="" style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);"><span class="" style="font-variant-ligatures: no-common-ligatures;"> MUMPS_INT8 *nnz_loc,</span></div><div class="" style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);"><span class="" style="font-variant-ligatures: no-common-ligatures;"> ^</span></div><div class="" style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);"><span class="" style="font-variant-ligatures: no-common-ligatures;">2 warnings and 4 errors generated.</span></div></div><br class=""><div><br class=""><blockquote type="cite" class=""><div class="">On Oct 31, 2017, at 4:25 PM, Smith, Barry F. <<a href="mailto:bsmith@mcs.anl.gov" class="">bsmith@mcs.anl.gov</a>> wrote:</div><br class="Apple-interchange-newline"><div class=""><div class=""><br class=""> Manav,<br class=""><br class=""> Thanks for reporting the problem <br class=""><br class=""> Fande,<br class=""><br class=""> Thanks for the pointer.<br class=""><br class=""> Satish determined the correct long term fix and it is in the branch barry/fix-lto_library-option-maint and will be put in the maint branch and master branch if it passes the testing tonight.<br class=""><br class=""> Barry<br class=""><br class=""><br class=""><blockquote type="cite" class="">On Oct 30, 2017, at 11:36 AM, Kong, Fande <<a href="mailto:fande.kong@inl.gov" class="">fande.kong@inl.gov</a>> wrote:<br class=""><br class="">We had exactly the same issue when upgraded compilers. I guess this is somehow related to gfortran. A simple way to work around for us is to change if with_rpath: to if False at line 54 of config/BuildSystem/config/libraries.py. <br class=""><br class="">Not sure if it works for you.<br class=""><br class="">Fande,<br class=""><br class=""><br class=""><br class=""><br class="">On Mon, Oct 30, 2017 at 10:14 AM, Manav Bhatia <<a href="mailto:bhatiamanav@gmail.com" class="">bhatiamanav@gmail.com</a>> wrote:<br class="">Hi, <br class=""><br class=""> I am trying to install pets 3.8 on a new MacBook machine with OS 10.13. I have installed openmpi from macports and I am getting this error on configuration. Attached is also the configure.log file. <br class=""><br class=""> I am not sure how to proceed with this. Any advice will be greatly appreciated!<br class=""><br class="">Regards,<br class="">Manav<br class=""><br class="">===============================================================================<br class=""> Configuring PETSc to compile on your system <br class="">===============================================================================<br class="">=============================================================================== ***** WARNING: Using default optimization C flags -g -O3 You might consider manually setting optimal optimization flags for your system with COPTFLAGS="optimization flags" see config/examples/arch-*-opt.py for examples =============================================================================== =============================================================================== ***** WARNING: Using default C++ optimization flags -g -O3 You might consider manually setting optimal optimization flags for your system with CXXOPTFLAGS="optimization flags" see config/examples/arch-*-opt.py for examples =============================================================================== =============================================================================== ***** WARNING: Using default FORTRAN optimization flags -g -O You might consider manually setting optimal optimization flags for your system with FOPTFLAGS="optimization flags" see config/examples/arch-*-opt.py for examples =============================================================================== =============================================================================== WARNING! Compiling PETSc with no debugging, this should only be done for timing and production runs. All development should be done when configured using --with-debugging=1 =============================================================================== TESTING: checkCLibraries from config.compilers(config/BuildSystem/config/compilers.py:171) *******************************************************************************<br class=""> UNABLE to CONFIGURE with GIVEN OPTIONS (see configure.log for details):<br class="">-------------------------------------------------------------------------------<br class="">C libraries cannot directly be used from Fortran<br class="">*******************************************************************************<br class=""><br class=""><br class=""><br class=""><br class=""><br class=""><br class=""></blockquote><br class=""></div></div></blockquote></div><br class=""></body></html>