<html><head><meta http-equiv="Content-Type" content="text/html; charset=us-ascii"></head><body style="word-wrap: break-word; -webkit-nbsp-mode: space; line-break: after-white-space;" class=""><div class="">I am not getting errors with mumps (please see below). </div><div class="">Interestingly, I just compiled this on another machine with clang-3.8 and gfortran-6.7 without problems.</div><div class=""><br class=""></div><div class="">-Manav</div><div class=""><br class=""></div><div class=""><div style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);" class=""><span style="font-variant-ligatures: no-common-ligatures" class="">mumps_c.c:307:53: error: no member named 'nnz' in 'CMUMPS_STRUC_C'; did you mean 'nz'?</span></div><div style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);" class=""><span style="font-variant-ligatures: no-common-ligatures" class=""> mumps_par->n=0; mumps_par->nz=0; mumps_par->nnz=0; mumps_par->nz_loc=0; mumps_par->nnz_loc=0; mumps_par->nelt=0;mumps_par->instance_number=0;mumps_par->deficiency=0;mumps_par->lwk_user=0;mumps_par->size_schur=0;mumps_par->lrhs=0; mumps_par->lredrhs=0; mumps_par->nrhs=0; mumps_par->nz_rhs=0; mumps_par->lsol_loc=0;</span></div><div style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);" class=""><span style="font-variant-ligatures: no-common-ligatures" class=""> ^~~</span></div><div style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);" class=""><span style="font-variant-ligatures: no-common-ligatures" class=""> nz</span></div><div style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);" class=""><span style="font-variant-ligatures: no-common-ligatures" class="">/Users/manav/Documents/codes/numerical_lib/petsc/include/cmumps_c.h:56:20: note: 'nz' declared here</span></div><div style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);" class=""><span style="font-variant-ligatures: no-common-ligatures" class=""> MUMPS_INT nz;</span></div><div style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);" class=""><span style="font-variant-ligatures: no-common-ligatures" class=""> ^</span></div><div style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);" class=""><span style="font-variant-ligatures: no-common-ligatures" class="">mumps_c.c:307:92: error: no member named 'nnz_loc' in 'CMUMPS_STRUC_C'; did you mean 'nz_loc'?</span></div><div style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);" class=""><span style="font-variant-ligatures: no-common-ligatures" class=""> mumps_par->n=0; mumps_par->nz=0; mumps_par->nnz=0; mumps_par->nz_loc=0; mumps_par->nnz_loc=0; mumps_par->nelt=0;mumps_par->instance_number=0;mumps_par->deficiency=0;mumps_par->lwk_user=0;mumps_par->size_schur=0;mumps_par->lrhs=0; mumps_par->lredrhs=0; mumps_par->nrhs=0; mumps_par->nz_rhs=0; mumps_par->lsol_loc=0;</span></div><div style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);" class=""><span style="font-variant-ligatures: no-common-ligatures" class=""> ^~~~~~~</span></div><div style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);" class=""><span style="font-variant-ligatures: no-common-ligatures" class=""> nz_loc</span></div><div style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);" class=""><span style="font-variant-ligatures: no-common-ligatures" class="">/Users/manav/Documents/codes/numerical_lib/petsc/include/cmumps_c.h:62:20: note: 'nz_loc' declared here</span></div><div style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);" class=""><span style="font-variant-ligatures: no-common-ligatures" class=""> MUMPS_INT nz_loc;</span></div><div style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);" class=""><span style="font-variant-ligatures: no-common-ligatures" class=""> ^</span></div><div style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);" class=""><span style="font-variant-ligatures: no-common-ligatures" class="">mumps_c.c:419:42: error: no member named 'nnz' in 'CMUMPS_STRUC_C'; did you mean 'nz'?</span></div><div style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);" class=""><span style="font-variant-ligatures: no-common-ligatures" class=""> &(mumps_par->nz), &(mumps_par->nnz), irn, &irn_avail, jcn, &jcn_avail, a, &a_avail,</span></div><div style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);" class=""><span style="font-variant-ligatures: no-common-ligatures" class=""> ^~~</span></div><div style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);" class=""><span style="font-variant-ligatures: no-common-ligatures" class=""> nz</span></div><div style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);" class=""><span style="font-variant-ligatures: no-common-ligatures" class="">/Users/manav/Documents/codes/numerical_lib/petsc/include/cmumps_c.h:56:20: note: 'nz' declared here</span></div><div style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);" class=""><span style="font-variant-ligatures: no-common-ligatures" class=""> MUMPS_INT nz;</span></div><div style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);" class=""><span style="font-variant-ligatures: no-common-ligatures" class=""> ^</span></div><div style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);" class=""><span style="font-variant-ligatures: no-common-ligatures" class="">mumps_c.c:420:46: error: no member named 'nnz_loc' in 'CMUMPS_STRUC_C'; did you mean 'nz_loc'?</span></div><div style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);" class=""><span style="font-variant-ligatures: no-common-ligatures" class=""> &(mumps_par->nz_loc), &(mumps_par->nnz_loc), irn_loc, &irn_loc_avail, jcn_loc, &jcn_loc_avail,</span></div><div style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);" class=""><span style="font-variant-ligatures: no-common-ligatures" class=""> ^~~~~~~</span></div><div style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);" class=""><span style="font-variant-ligatures: no-common-ligatures" class=""> nz_loc</span></div><div style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);" class=""><span style="font-variant-ligatures: no-common-ligatures" class="">/Users/manav/Documents/codes/numerical_lib/petsc/include/cmumps_c.h:62:20: note: 'nz_loc' declared here</span></div><div style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);" class=""><span style="font-variant-ligatures: no-common-ligatures" class=""> MUMPS_INT nz_loc;</span></div><div style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);" class=""><span style="font-variant-ligatures: no-common-ligatures" class=""> ^</span></div><div style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);" class=""><span style="font-variant-ligatures: no-common-ligatures" class="">mumps_c.c:419:29: warning: incompatible pointer types passing 'int *' to parameter of type 'int64_t *' (aka 'long long *') [-Wincompatible-pointer-types]</span></div><div style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);" class=""><span style="font-variant-ligatures: no-common-ligatures" class=""> &(mumps_par->nz), &(mumps_par->nnz), irn, &irn_avail, jcn, &jcn_avail, a, &a_avail,</span></div><div style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);" class=""><span style="font-variant-ligatures: no-common-ligatures" class=""> ^~~~~~~~~~~~~~~~~</span></div><div style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);" class=""><span style="font-variant-ligatures: no-common-ligatures" class="">mumps_c.c:99:28: note: passing argument to parameter 'nnz' here</span></div><div style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);" class=""><span style="font-variant-ligatures: no-common-ligatures" class=""> MUMPS_INT8 *nnz,</span></div><div style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);" class=""><span style="font-variant-ligatures: no-common-ligatures" class=""> ^</span></div><div style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);" class=""><span style="font-variant-ligatures: no-common-ligatures" class="">mumps_c.c:420:33: warning: incompatible pointer types passing 'int *' to parameter of type 'int64_t *' (aka 'long long *') [-Wincompatible-pointer-types]</span></div><div style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);" class=""><span style="font-variant-ligatures: no-common-ligatures" class=""> &(mumps_par->nz_loc), &(mumps_par->nnz_loc), irn_loc, &irn_loc_avail, jcn_loc, &jcn_loc_avail,</span></div><div style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);" class=""><span style="font-variant-ligatures: no-common-ligatures" class=""> ^~~~~~~~~~~~~~~~~~~~~</span></div><div style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);" class=""><span style="font-variant-ligatures: no-common-ligatures" class="">mumps_c.c:107:28: note: passing argument to parameter 'nnz_loc' here</span></div><div style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);" class=""><span style="font-variant-ligatures: no-common-ligatures" class=""> MUMPS_INT8 *nnz_loc,</span></div><div style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);" class=""><span style="font-variant-ligatures: no-common-ligatures" class=""> ^</span></div><div style="margin: 0px; font-stretch: normal; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(244, 244, 244); background-color: rgba(0, 0, 0, 0.85098);" class=""><span style="font-variant-ligatures: no-common-ligatures" class="">2 warnings and 4 errors generated.</span></div></div><div class=""><span style="font-variant-ligatures: no-common-ligatures" class=""><br class=""></span></div><br class=""><div><br class=""><blockquote type="cite" class=""><div class="">On Oct 30, 2017, at 11:36 AM, Kong, Fande <<a href="mailto:fande.kong@inl.gov" class="">fande.kong@inl.gov</a>> wrote:</div><br class="Apple-interchange-newline"><div class=""><meta http-equiv="Content-Type" content="text/html; charset=utf-8" class=""><div dir="ltr" class=""><div class="">We had exactly the same issue when upgraded compilers. I guess this is somehow related to gfortran. A simple way to work around for us is to change<i class=""> if with_rpath</i>: to <i class=""> if False </i>at line 54 of config/BuildSystem/config/libraries.py. <br class=""><br class=""></div><div class="">Not sure if it works for you.<br class=""><br class=""></div><div class="">Fande,<br class=""></div><div class=""><br class=""></div><br class=""><br class=""></div><div class="gmail_extra"><br class=""><div class="gmail_quote">On Mon, Oct 30, 2017 at 10:14 AM, Manav Bhatia <span dir="ltr" class=""><<a href="mailto:bhatiamanav@gmail.com" target="_blank" class="">bhatiamanav@gmail.com</a>></span> wrote:<br class=""><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div style="word-wrap:break-word;line-break:after-white-space" class="">Hi, <div class=""><br class=""></div><div class=""> I am trying to install pets 3.8 on a new MacBook machine with OS 10.13. I have installed openmpi from macports and I am getting this error on configuration. Attached is also the configure.log file. </div><div class=""><br class=""></div><div class=""> I am not sure how to proceed with this. Any advice will be greatly appreciated!</div><div class=""><br class=""></div><div class="">Regards,</div><div class="">Manav</div><div class=""><br class=""></div><div class=""><div style="margin:0px;font-stretch:normal;font-size:10px;line-height:normal;font-family:Monaco;color:rgb(244,244,244);background-color:rgba(0,0,0,0.85098)" class=""><span style="font-variant-ligatures:no-common-ligatures" class="">==============================<wbr class="">==============================<wbr class="">===================</span></div><div style="margin:0px;font-stretch:normal;font-size:10px;line-height:normal;font-family:Monaco;color:rgb(244,244,244);background-color:rgba(0,0,0,0.85098)" class=""><span style="font-variant-ligatures:no-common-ligatures" class=""> Configuring PETSc to compile on your system </span></div><div style="margin:0px;font-stretch:normal;font-size:10px;line-height:normal;font-family:Monaco;color:rgb(244,244,244);background-color:rgba(0,0,0,0.85098)" class=""><span style="font-variant-ligatures:no-common-ligatures" class="">==============================<wbr class="">==============================<wbr class="">===================</span></div><div style="margin:0px;font-stretch:normal;font-size:10px;line-height:normal;font-family:Monaco;color:rgb(244,244,244);background-color:rgba(0,0,0,0.85098)" class=""><span style="font-variant-ligatures:no-common-ligatures" class="">==============================<wbr class="">==============================<wbr class="">=================== ***** WARNING: Using default optimization C flags -g -O3 You might consider manually setting optimal optimization flags for your system with COPTFLAGS="optimization flags" see config/examples/arch-*-opt.py for examples ==============================<wbr class="">==============================<wbr class="">=================== ==============================<wbr class="">==============================<wbr class="">=================== ***** WARNING: Using default C++ optimization flags -g -O3 You might consider manually setting optimal optimization flags for your system with CXXOPTFLAGS="optimization flags" see config/examples/arch-*-opt.py for examples ==============================<wbr class="">==============================<wbr class="">=================== ==============================<wbr class="">==============================<wbr class="">=================== ***** WARNING: Using default FORTRAN optimization flags -g -O You might consider manually setting optimal optimization flags for your system with FOPTFLAGS="optimization flags" see config/examples/arch-*-opt.py for examples ==============================<wbr class="">==============================<wbr class="">=================== ==============================<wbr class="">==============================<wbr class="">=================== WARNING! Compiling PETSc with no debugging, this should only be done for timing and production runs. All development should be done when configured using --with-debugging=1 ==============================<wbr class="">==============================<wbr class="">=================== TESTING: checkCLibraries from config.compilers(config/<wbr class="">BuildSystem/config/compilers.<wbr class="">py:171) ******************************<wbr class="">******************************<wbr class="">*******************</span></div><div style="margin:0px;font-stretch:normal;font-size:10px;line-height:normal;font-family:Monaco;color:rgb(244,244,244);background-color:rgba(0,0,0,0.85098)" class=""><span style="font-variant-ligatures:no-common-ligatures" class=""> UNABLE to CONFIGURE with GIVEN OPTIONS (see configure.log for details):</span></div><div style="margin:0px;font-stretch:normal;font-size:10px;line-height:normal;font-family:Monaco;color:rgb(244,244,244);background-color:rgba(0,0,0,0.85098)" class=""><span style="font-variant-ligatures:no-common-ligatures" class="">------------------------------<wbr class="">------------------------------<wbr class="">-------------------</span></div><div style="margin:0px;font-stretch:normal;font-size:10px;line-height:normal;font-family:Monaco;color:rgb(244,244,244);background-color:rgba(0,0,0,0.85098)" class=""><span style="font-variant-ligatures:no-common-ligatures" class="">C libraries cannot directly be used from Fortran</span></div><div style="margin:0px;font-stretch:normal;font-size:10px;line-height:normal;font-family:Monaco;color:rgb(244,244,244);background-color:rgba(0,0,0,0.85098)" class=""><span style="font-variant-ligatures:no-common-ligatures" class="">******************************<wbr class="">******************************<wbr class="">*******************</span></div></div><div class=""><span style="font-variant-ligatures:no-common-ligatures" class=""><br class=""></span></div><div class=""><span style="font-variant-ligatures:no-common-ligatures" class=""><br class=""></span></div><div class=""><span style="font-variant-ligatures:no-common-ligatures" class=""><br class=""></span></div><div class="">
</div></div><br class=""><div style="word-wrap:break-word;line-break:after-white-space" class=""><div class=""></div></div><br class=""></blockquote></div><br class=""></div>
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