<div dir="ltr"><div class="gmail_extra"><div class="gmail_quote">On Fri, Mar 3, 2017 at 12:56 PM, Sander Arens <span dir="ltr"><<a href="mailto:Sander.Arens@ugent.be" target="_blank">Sander.Arens@ugent.be</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div dir="ltr"><div><div><div>Max, <br><br></div>I'm assuming you use DMPlex for your mesh? If so, did you only specify the faces in the DMLabel (and not vertices or edges). Do you get this error only in parallel? <br></div><br></div>If so, I can confirm this bug. I submitted a pull request for this yesterday.</div></blockquote><div><br></div><div>Yep, I saw Sander's pull request. I will get in merged in tomorrow when I get home to Houston.</div><div><br></div><div> Thanks,</div><div><br></div><div> Matt</div><div> </div><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div class="HOEnZb"><div class="h5"><div class="gmail_extra"><div class="gmail_quote">On 3 March 2017 at 18:43, Lukas van de Wiel <span dir="ltr"><<a href="mailto:lukas.drinkt.thee@gmail.com" target="_blank">lukas.drinkt.thee@gmail.com</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div dir="ltr"><div><div>You have apparently preallocated the non-zeroes of you matrix, and the room was insufficient to accommodate all your equations. <br> <br>What happened after you tried:<br><br>MatSetOption(A, MAT_NEW_NONZERO_ALLOCATION_ERR<wbr>, PETSC_FALSE)<br><br><br></div>Cheers<span class="m_-9110966300037860180HOEnZb"><font color="#888888"><br></font></span></div><span class="m_-9110966300037860180HOEnZb"><font color="#888888">Lukas<br></font></span></div><div class="m_-9110966300037860180HOEnZb"><div class="m_-9110966300037860180h5"><div class="gmail_extra"><br><div class="gmail_quote">On Fri, Mar 3, 2017 at 6:37 PM, Maximilian Hartig <span dir="ltr"><<a href="mailto:imilian.hartig@gmail.com" target="_blank">imilian.hartig@gmail.com</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">Hello,<br>
<br>
I am working on a transient structural FEM code with PETSc. I managed to create a slow but functioning program with the use of petscFE and a TS solver. The code runs fine until I try to restrict movement in all three spatial directions for one face. I then get the error which is attached below.<br>
So apparently DMPlexMatSetClosure tries to write/read beyond what was priorly allocated. I do however not call MatSeqAIJSetPreallocation myself in the code. So I’m unsure where to start looking for the bug. In my understanding, PETSc should know from the DM how much space to allocate.<br>
Could you kindly give me a hint?<br>
<br>
Thanks,<br>
<br>
Max<br>
<br>
0 SNES Function norm 2.508668036663e-06<br>
[0]PETSC ERROR: --------------------- Error Message ------------------------------<wbr>------------------------------<wbr>--<br>
[0]PETSC ERROR: Argument out of range<br>
[0]PETSC ERROR: New nonzero at (41754,5) caused a malloc<br>
Use MatSetOption(A, MAT_NEW_NONZERO_ALLOCATION_ERR<wbr>, PETSC_FALSE) to turn off this check<br>
[0]PETSC ERROR: See <a href="http://www.mcs.anl.gov/petsc/documentation/faq.html" rel="noreferrer" target="_blank">http://www.mcs.anl.gov/petsc/d<wbr>ocumentation/faq.html</a> for trouble shooting.<br>
[0]PETSC ERROR: Petsc Development GIT revision: v3.7.5-3223-g99077fc GIT Date: 2017-02-28 13:41:43 -0600<br>
[0]PETSC ERROR: ./S3 on a arch-linux-gnu-intel named XXXXXXX by hartig Fri Mar 3 17:55:57 2017<br>
[0]PETSC ERROR: Configure options PETSC_ARCH=arch-linux-gnu-inte<wbr>l --with-cc=/opt/intel/compilers<wbr>_and_libraries/linux/mpi/intel<wbr>64/bin/mpiicc --with-cxx=/opt/intel/compiler<wbr>s_and_libraries/linux/mpi/inte<wbr>l64/bin/mpiicpc --with-fc=/opt/intel/compilers<wbr>_and_libraries/linux/mpi/intel<wbr>64/bin/mpiifort --download-ml<br>
[0]PETSC ERROR: #1 MatSetValues_SeqAIJ() line 455 in /home/hartig/petsc/src/mat/imp<wbr>ls/aij/seq/aij.c<br>
[0]PETSC ERROR: #2 MatSetValues() line 1270 in /home/hartig/petsc/src/mat/int<wbr>erface/matrix.c<br>
[0]PETSC ERROR: [0]ERROR in DMPlexMatSetClosure<br>
[0]mat for sieve point 60<br>
[0]mat row indices[0] = 41754<br>
[0]mat row indices[1] = 41755<br>
[0]mat row indices[2] = 41756<br>
[0]mat row indices[3] = 41760<br>
[0]mat row indices[4] = 41761<br>
[0]mat row indices[5] = 41762<br>
[0]mat row indices[6] = 41766<br>
[0]mat row indices[7] = -41768<br>
[0]mat row indices[8] = 41767<br>
[0]mat row indices[9] = 41771<br>
[0]mat row indices[10] = -41773<br>
[0]mat row indices[11] = 41772<br>
[0]mat row indices[12] = 41776<br>
[0]mat row indices[13] = 41777<br>
[0]mat row indices[14] = 41778<br>
[0]mat row indices[15] = 41782<br>
[0]mat row indices[16] = -41784<br>
[0]mat row indices[17] = 41783<br>
[0]mat row indices[18] = 261<br>
[0]mat row indices[19] = -263<br>
[0]mat row indices[20] = 262<br>
[0]mat row indices[21] = 24318<br>
[0]mat row indices[22] = 24319<br>
[0]mat row indices[23] = 24320<br>
[0]mat row indices[24] = -7<br>
[0]mat row indices[25] = -8<br>
[0]mat row indices[26] = 6<br>
[0]mat row indices[27] = 1630<br>
[0]mat row indices[28] = -1632<br>
[0]mat row indices[29] = 1631<br>
[0]mat row indices[30] = 41757<br>
[0]mat row indices[31] = 41758<br>
[0]mat row indices[32] = 41759<br>
[0]mat row indices[33] = 41763<br>
[0]mat row indices[34] = 41764<br>
[0]mat row indices[35] = 41765<br>
[0]mat row indices[36] = 41768<br>
[0]mat row indices[37] = 41769<br>
[0]mat row indices[38] = 41770<br>
[0]mat row indices[39] = 41773<br>
[0]mat row indices[40] = 41774<br>
[0]mat row indices[41] = 41775<br>
[0]mat row indices[42] = 41779<br>
[0]mat row indices[43] = 41780<br>
[0]mat row indices[44] = 41781<br>
[0]mat row indices[45] = 41784<br>
[0]mat row indices[46] = 41785<br>
[0]mat row indices[47] = 41786<br>
[0]mat row indices[48] = 263<br>
[0]mat row indices[49] = 264<br>
[0]mat row indices[50] = 265<br>
[0]mat row indices[51] = 24321<br>
[0]mat row indices[52] = 24322<br>
[0]mat row indices[53] = 24323<br>
[0]mat row indices[54] = 5<br>
[0]mat row indices[55] = 6<br>
[0]mat row indices[56] = 7<br>
[0]mat row indices[57] = 1632<br>
[0]mat row indices[58] = 1633<br>
[0]mat row indices[59] = 1634<br>
[0] 1.29801 0.0998428 -0.275225 1.18171 -0.0093323 0.055045 1.18146 0.00525527 -0.11009 -0.588378 0.264666 -0.0275225 -2.39586 -0.210511 0.22018 -0.621071 0.0500786 0.137613 -0.180869 -0.0974804 0.0344031 -0.0302673 -0.09 0. -0.145175 -0.00383346 -0.00688063 0.300442 -0.00868618 -0.0275225 8.34577e-11 0. 0. 4.17288e-11 0. 0. 4.17288e-11 0. 0. 4.17288e-11 0. 0. 4.17288e-11 0. 0. 2.08644e-11 0. 0. -1.04322e-11 0. 0. -1.04322e-11 0. 0. -1.56483e-11 0. 0. -1.56483e-11 0. 0.<br>
[0] 0.0998428 0.590663 -0.0320009 0.0270594 0.360043 0.0297282 -0.0965489 0.270936 -0.0652389 0.32647 -0.171351 -0.00845384 -0.206902 -0.657189 0.0279137 0.0500786 -0.197561 -0.0160508 -0.12748 -0.138996 0.0408591 -0.06 -0.105935 0.0192308 0.00161757 -0.0361182 0.0042968 -0.0141372 0.0855084 -0.000284088 0. 8.34577e-11 0. 0. 4.17288e-11 0. 0. 4.17288e-11 0. 0. 4.17288e-11 0. 0. 4.17288e-11 0. 0. 2.08644e-11 0. 0. -1.04322e-11 0. 0. -1.04322e-11 0. 0. -1.56483e-11 0. 0. -1.56483e-11 0.<br>
[0] -0.275225 -0.0320009 0.527521 -0.055045 0.0285918 0.234796 -0.165135 -0.0658071 0.322754 0.0275225 -0.0207062 -0.114921 0.33027 0.0418706 -0.678455 0.137613 -0.0160508 -0.235826 0.0344031 0.0312437 -0.0845583 0. 0.0288462 -0.0302673 0.00688063 0.00443884 -0.0268103 -0.0412838 -0.000426133 0.0857668 0. 0. 8.34577e-11 0. 0. 4.17288e-11 0. 0. 4.17288e-11 0. 0. 4.17288e-11 0. 0. 4.17288e-11 0. 0. 2.08644e-11 0. 0. -1.04322e-11 0. 0. -1.04322e-11 0. 0. -1.56483e-11 0. 0. -1.56483e-11<br>
[0] 1.18171 0.0270594 -0.055045 1.29651 -0.0821157 0.275225 1.1468 -0.0675282 0.11009 -0.637271 0.141058 -0.137613 -2.37741 -0.0649437 -0.22018 -0.588378 0.24647 0.0275225 -0.140937 -0.00838243 0.00688063 -0.0175533 -0.09 0. -0.16373 -0.0747355 -0.0344031 0.300255 -0.026882 0.0275225 4.17288e-11 0. 0. 8.34577e-11 0. 0. 4.17288e-11 0. 0. 2.08644e-11 0. 0. 4.17288e-11 0. 0. 4.17288e-11 0. 0. -1.56483e-11 0. 0. -1.04322e-11 0. 0. -1.04322e-11 0. 0. -1.56483e-11 0. 0.<br>
[0] -0.0093323 0.360043 0.0285918 -0.0821157 0.585404 -0.0263191 -0.205724 0.149643 0.0652389 0.141058 -0.254263 0.0452109 0.011448 -0.592598 -0.0279137 0.344666 -0.171351 -0.0207062 0.00616654 -0.0212853 -0.0115868 -0.06 -0.0614365 -0.0192308 -0.104736 -0.0790071 -0.0335691 -0.041431 0.084851 0.000284088 0. 4.17288e-11 0. 0. 8.34577e-11 0. 0. 4.17288e-11 0. 0. 2.08644e-11 0. 0. 4.17288e-11 0. 0. 4.17288e-11 0. 0. -1.56483e-11 0. 0. -1.04322e-11 0. 0. -1.04322e-11 0. 0. -1.56483e-11 0.<br>
[0] 0.055045 0.0297282 0.234796 0.275225 -0.0263191 0.526019 0.165135 0.0658071 0.288099 -0.137613 0.0452109 -0.252027 -0.33027 -0.0418706 -0.660001 -0.0275225 -0.00845384 -0.114921 -0.00688063 -0.0117288 -0.0225723 0. -0.0288462 -0.0175533 -0.0344031 -0.0239537 -0.0674185 0.0412838 0.000426133 0.085579 0. 0. 4.17288e-11 0. 0. 8.34577e-11 0. 0. 4.17288e-11 0. 0. 2.08644e-11 0. 0. 4.17288e-11 0. 0. 4.17288e-11 0. 0. -1.56483e-11 0. 0. -1.04322e-11 0. 0. -1.04322e-11 0. 0. -1.56483e-11<br>
[0] 1.18146 -0.0965489 -0.165135 1.1468 -0.205724 0.165135 3.70665 0.626591 3.1198e-14 -2.37741 0.0332522 -0.275225 -2.44501 -0.417727 4.66207e-17 -2.39586 -0.148706 0.275225 0.283843 0.0476669 0.0137613 0.00972927 0.06 0. 0.288268 0.0567649 -0.0137613 0.601523 0.0444318 -1.2387e-17 4.17288e-11 0. 0. 4.17288e-11 0. 0. 8.34577e-11 0. 0. 4.17288e-11 0. 0. 2.08644e-11 0. 0. 4.17288e-11 0. 0. -1.04322e-11 0. 0. -1.56483e-11 0. 0. -1.04322e-11 0. 0. -1.56483e-11 0. 0.<br>
[0] 0.00525527 0.270936 -0.0658071 -0.0675282 0.149643 0.0658071 0.626591 1.29259 -0.02916 -0.0867478 -0.592598 -0.0413024 -0.417727 -0.829208 6.46318e-18 -0.268706 -0.657189 0.0413024 0.03402 0.0715157 0.0179272 0.04 0.0340524 1.77708e-18 0.0704117 0.0870061 0.0112328 0.0644318 0.17325 -1.41666e-19 0. 4.17288e-11 0. 0. 4.17288e-11 0. 0. 8.34577e-11 0. 0. 4.17288e-11 0. 0. 2.08644e-11 0. 0. 4.17288e-11 0. 0. -1.04322e-11 0. 0. -1.56483e-11 0. 0. -1.04322e-11 0. 0. -1.56483e-11 0.<br>
[0] -0.11009 -0.0652389 0.322754 0.11009 0.0652389 0.288099 3.12405e-14 -0.02916 1.21876 -0.275225 -0.0284819 -0.660001 9.50032e-17 9.55728e-18 -0.727604 0.275225 0.0284819 -0.678455 0.055045 0.0279687 0.0250605 0. 1.71863e-18 0.00972927 -0.055045 0.00119132 0.0294863 -1.47451e-17 -1.90582e-19 0.172172 0. 0. 4.17288e-11 0. 0. 4.17288e-11 0. 0. 8.34577e-11 0. 0. 4.17288e-11 0. 0. 2.08644e-11 0. 0. 4.17288e-11 0. 0. -1.04322e-11 0. 0. -1.56483e-11 0. 0. -1.04322e-11 0. 0. -1.56483e-11<br>
[0] -0.588378 0.32647 0.0275225 -0.637271 0.141058 -0.137613 -2.37741 -0.0867478 -0.275225 3.68138 0.0265907 3.13395e-14 1.1468 -0.107528 0.11009 1.18171 0.00886356 -3.13222e-14 -1.06248 -0.175069 0.158254 0.00657075 -0.03 0. 0.152747 -0.00526446 0.0344031 -1.50368 -0.0983732 0.0825675 4.17288e-11 0. 0. 2.08644e-11 0. 0. 4.17288e-11 0. 0. 8.34577e-11 0. 0. 4.17288e-11 0. 0. 4.17288e-11 0. 0. -1.04322e-11 0. 0. -1.56483e-11 0. 0. -1.56483e-11 0. 0. -1.04322e-11 0. 0.<br>
[0] 0.264666 -0.171351 -0.0207062 0.141058 -0.254263 0.0452109 0.0332522 -0.592598 -0.0284819 0.0265907 1.20415 -0.0932626 -0.165724 0.149643 0.0524184 0.00886356 0.360043 0.0419805 -0.131422 -0.326529 0.0132913 -0.02 0.0229976 -0.00641026 -0.0152645 0.0405681 -0.00489246 -0.14202 -0.432665 0.000852265 0. 4.17288e-11 0. 0. 2.08644e-11 0. 0. 4.17288e-11 0. 0. 8.34577e-11 0. 0. 4.17288e-11 0. 0. 4.17288e-11 0. 0. -1.04322e-11 0. 0. -1.56483e-11 0. 0. -1.56483e-11 0. 0. -1.04322e-11 0.<br>
[0] -0.0275225 -0.00845384 -0.114921 -0.137613 0.0452109 -0.252027 -0.275225 -0.0413024 -0.660001 3.13785e-14 -0.0932626 1.19349 0.165135 0.0786276 0.288099 -3.12866e-14 0.0163395 0.234796 0.116971 0.0128652 -0.322147 0. -0.00961538 0.00657075 0.0344031 -0.00168733 0.0564359 0.123851 0.0012784 -0.430298 0. 0. 4.17288e-11 0. 0. 2.08644e-11 0. 0. 4.17288e-11 0. 0. 8.34577e-11 0. 0. 4.17288e-11 0. 0. 4.17288e-11 0. 0. -1.04322e-11 0. 0. -1.56483e-11 0. 0. -1.56483e-11 0. 0. -1.04322e-11<br>
[0] -2.39586 -0.206902 0.33027 -2.37741 0.011448 -0.33027 -2.44501 -0.417727 6.38053e-17 1.1468 -0.165724 0.165135 4.88671 0.435454 0. 1.18146 -0.0565489 -0.165135 0.307839 0.0658628 -0.0412838 -0.00807774 0.18 0. 0.303413 0.038569 0.0412838 -0.599871 0.115568 0. 4.17288e-11 0. 0. 4.17288e-11 0. 0. 2.08644e-11 0. 0. 4.17288e-11 0. 0. 8.34577e-11 0. 0. 4.17288e-11 0. 0. -1.56483e-11 0. 0. -1.04322e-11 0. 0. -1.56483e-11 0. 0. -1.04322e-11 0. 0.<br>
[0] -0.210511 -0.657189 0.0418706 -0.0649437 -0.592598 -0.0418706 -0.417727 -0.829208 6.30468e-18 -0.107528 0.149643 0.0786276 0.435454 1.64686 0. -0.0347447 0.270936 -0.0786276 0.0613138 0.111396 -0.0100415 0.12 -0.0282721 0. 0.043118 0.0959058 0.0100415 0.175568 -0.167469 0. 0. 4.17288e-11 0. 0. 4.17288e-11 0. 0. 2.08644e-11 0. 0. 4.17288e-11 0. 0. 8.34577e-11 0. 0. 4.17288e-11 0. 0. -1.56483e-11 0. 0. -1.04322e-11 0. 0. -1.56483e-11 0. 0. -1.04322e-11 0.<br>
[0] 0.22018 0.0279137 -0.678455 -0.22018 -0.0279137 -0.660001 4.70408e-17 7.53383e-18 -0.727604 0.11009 0.0524184 0.288099 0. 0. 1.4519 -0.11009 -0.0524184 0.322754 -0.0275225 -0.00669434 0.0931634 0. 0. -0.00807774 0.0275225 0.00669434 0.0887375 0. 0. -0.17052 0. 0. 4.17288e-11 0. 0. 4.17288e-11 0. 0. 2.08644e-11 0. 0. 4.17288e-11 0. 0. 8.34577e-11 0. 0. 4.17288e-11 0. 0. -1.56483e-11 0. 0. -1.04322e-11 0. 0. -1.56483e-11 0. 0. -1.04322e-11<br>
[0] -0.621071 0.0500786 0.137613 -0.588378 0.344666 -0.0275225 -2.39586 -0.268706 0.275225 1.18171 0.00886356 -3.12954e-14 1.18146 -0.0347447 -0.11009 3.64748 0.0265907 3.12693e-14 0.152935 0.0174804 -0.0344031 0.00233276 -0.03 0. -1.0575 -0.0704425 -0.158254 -1.50311 -0.0437857 -0.0825675 2.08644e-11 0. 0. 4.17288e-11 0. 0. 4.17288e-11 0. 0. 4.17288e-11 0. 0. 4.17288e-11 0. 0. 8.34577e-11 0. 0. -1.56483e-11 0. 0. -1.56483e-11 0. 0. -1.04322e-11 0. 0. -1.04322e-11 0. 0.<br>
[0] 0.0500786 -0.197561 -0.0160508 0.24647 -0.171351 -0.00845384 -0.148706 -0.657189 0.0284819 0.00886356 0.360043 0.0163395 -0.0565489 0.270936 -0.0524184 0.0265907 1.08549 0.0349425 0.00748035 0.0412255 -0.00239755 -0.02 0.00816465 0.00641026 -0.0540894 -0.309066 -0.00600133 -0.0601388 -0.430693 -0.000852265 0. 2.08644e-11 0. 0. 4.17288e-11 0. 0. 4.17288e-11 0. 0. 4.17288e-11 0. 0. 4.17288e-11 0. 0. 8.34577e-11 0. 0. -1.56483e-11 0. 0. -1.56483e-11 0. 0. -1.04322e-11 0. 0. -1.04322e-11 0.<br>
[0] 0.137613 -0.0160508 -0.235826 0.0275225 -0.0207062 -0.114921 0.275225 0.0413024 -0.678455 -3.13299e-14 0.0419805 0.234796 -0.165135 -0.0786276 0.322754 3.12753e-14 0.0349425 1.15959 -0.0344031 -0.00560268 0.0566238 0. 0.00961538 0.00233276 -0.116971 -0.00557519 -0.317157 -0.123851 -0.0012784 -0.429734 0. 0. 2.08644e-11 0. 0. 4.17288e-11 0. 0. 4.17288e-11 0. 0. 4.17288e-11 0. 0. 4.17288e-11 0. 0. 8.34577e-11 0. 0. -1.56483e-11 0. 0. -1.56483e-11 0. 0. -1.04322e-11 0. 0. -1.04322e-11<br>
[0] -0.180869 -0.12748 0.0344031 -0.140937 0.00616654 -0.00688063 0.283843 0.03402 0.055045 -1.06248 -0.131422 0.116971 0.307839 0.0613138 -0.0275225 0.152935 0.00748035 -0.0344031 0.479756 0.112441 -0.103209 0.00698363 0.03 0. -0.14792 -0.0238335 -0.00688063 0.300855 0.0313138 -0.0275225 -1.04322e-11 0. 0. -1.56483e-11 0. 0. -1.04322e-11 0. 0. -1.04322e-11 0. 0. -1.56483e-11 0. 0. -1.56483e-11 0. 0. 1.56483e-11 0. 0. 2.60805e-12 0. 0. 2.60805e-12 0. 0. 2.60805e-12 0. 0.<br>
[0] -0.0974804 -0.138996 0.0312437 -0.00838243 -0.0212853 -0.0117288 0.0476669 0.0715157 0.0279687 -0.175069 -0.326529 0.0128652 0.0658628 0.111396 -0.00669434 0.0174804 0.0412255 -0.00560268 0.112441 0.197005 -0.0360388 0.02 0.0244427 -0.00641026 -0.0283824 -0.045728 -0.00531859 0.0458628 0.0869535 -0.000284088 0. -1.04322e-11 0. 0. -1.56483e-11 0. 0. -1.04322e-11 0. 0. -1.04322e-11 0. 0. -1.56483e-11 0. 0. -1.56483e-11 0. 0. 1.56483e-11 0. 0. 2.60805e-12 0. 0. 2.60805e-12 0. 0. 2.60805e-12 0.<br>
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[0] 1.32894e-06 0. 0. 1.99342e-06 0. 0. 1.32894e-06 0. 0. 1.32894e-06 0. 0. 1.99342e-06 0. 0. 1.99342e-06 0. 0. -1.99342e-06 0. 0. -3.32236e-07 0. 0. -3.32236e-07 0. 0. -3.32236e-07 0. 0. -6.64472e-10 0. 0. -9.96708e-10 0. 0. -6.64472e-10 0. 0. -6.64472e-10 0. 0. -9.96708e-10 0. 0. -9.96708e-10 0. 0. 9.96708e-10 0. 0. 1.66118e-10 0. 0. 1.66118e-10 0. 0. 1.66118e-10 0. 0.<br>
[0] 0. 1.32894e-06 0. 0. 1.99342e-06 0. 0. 1.32894e-06 0. 0. 1.32894e-06 0. 0. 1.99342e-06 0. 0. 1.99342e-06 0. 0. -1.99342e-06 0. 0. -3.32236e-07 0. 0. -3.32236e-07 0. 0. -3.32236e-07 0. 0. -6.64472e-10 0. 0. -9.96708e-10 0. 0. -6.64472e-10 0. 0. -6.64472e-10 0. 0. -9.96708e-10 0. 0. -9.96708e-10 0. 0. 9.96708e-10 0. 0. 1.66118e-10 0. 0. 1.66118e-10 0. 0. 1.66118e-10 0.<br>
[0] 0. 0. 1.32894e-06 0. 0. 1.99342e-06 0. 0. 1.32894e-06 0. 0. 1.32894e-06 0. 0. 1.99342e-06 0. 0. 1.99342e-06 0. 0. -1.99342e-06 0. 0. -3.32236e-07 0. 0. -3.32236e-07 0. 0. -3.32236e-07 0. 0. -6.64472e-10 0. 0. -9.96708e-10 0. 0. -6.64472e-10 0. 0. -6.64472e-10 0. 0. -9.96708e-10 0. 0. -9.96708e-10 0. 0. 9.96708e-10 0. 0. 1.66118e-10 0. 0. 1.66118e-10 0. 0. 1.66118e-10<br>
[0] 1.32894e-06 0. 0. 1.32894e-06 0. 0. 1.99342e-06 0. 0. 1.99342e-06 0. 0. 1.32894e-06 0. 0. 1.99342e-06 0. 0. -3.32236e-07 0. 0. -1.99342e-06 0. 0. -3.32236e-07 0. 0. -3.32236e-07 0. 0. -6.64472e-10 0. 0. -6.64472e-10 0. 0. -9.96708e-10 0. 0. -9.96708e-10 0. 0. -6.64472e-10 0. 0. -9.96708e-10 0. 0. 1.66118e-10 0. 0. 9.96708e-10 0. 0. 1.66118e-10 0. 0. 1.66118e-10 0. 0.<br>
[0] 0. 1.32894e-06 0. 0. 1.32894e-06 0. 0. 1.99342e-06 0. 0. 1.99342e-06 0. 0. 1.32894e-06 0. 0. 1.99342e-06 0. 0. -3.32236e-07 0. 0. -1.99342e-06 0. 0. -3.32236e-07 0. 0. -3.32236e-07 0. 0. -6.64472e-10 0. 0. -6.64472e-10 0. 0. -9.96708e-10 0. 0. -9.96708e-10 0. 0. -6.64472e-10 0. 0. -9.96708e-10 0. 0. 1.66118e-10 0. 0. 9.96708e-10 0. 0. 1.66118e-10 0. 0. 1.66118e-10 0.<br>
[0] 0. 0. 1.32894e-06 0. 0. 1.32894e-06 0. 0. 1.99342e-06 0. 0. 1.99342e-06 0. 0. 1.32894e-06 0. 0. 1.99342e-06 0. 0. -3.32236e-07 0. 0. -1.99342e-06 0. 0. -3.32236e-07 0. 0. -3.32236e-07 0. 0. -6.64472e-10 0. 0. -6.64472e-10 0. 0. -9.96708e-10 0. 0. -9.96708e-10 0. 0. -6.64472e-10 0. 0. -9.96708e-10 0. 0. 1.66118e-10 0. 0. 9.96708e-10 0. 0. 1.66118e-10 0. 0. 1.66118e-10<br>
[0] 1.99342e-06 0. 0. 1.32894e-06 0. 0. 1.32894e-06 0. 0. 1.99342e-06 0. 0. 1.99342e-06 0. 0. 1.32894e-06 0. 0. -3.32236e-07 0. 0. -3.32236e-07 0. 0. -1.99342e-06 0. 0. -3.32236e-07 0. 0. -9.96708e-10 0. 0. -6.64472e-10 0. 0. -6.64472e-10 0. 0. -9.96708e-10 0. 0. -9.96708e-10 0. 0. -6.64472e-10 0. 0. 1.66118e-10 0. 0. 1.66118e-10 0. 0. 9.96708e-10 0. 0. 1.66118e-10 0. 0.<br>
[0] 0. 1.99342e-06 0. 0. 1.32894e-06 0. 0. 1.32894e-06 0. 0. 1.99342e-06 0. 0. 1.99342e-06 0. 0. 1.32894e-06 0. 0. -3.32236e-07 0. 0. -3.32236e-07 0. 0. -1.99342e-06 0. 0. -3.32236e-07 0. 0. -9.96708e-10 0. 0. -6.64472e-10 0. 0. -6.64472e-10 0. 0. -9.96708e-10 0. 0. -9.96708e-10 0. 0. -6.64472e-10 0. 0. 1.66118e-10 0. 0. 1.66118e-10 0. 0. 9.96708e-10 0. 0. 1.66118e-10 0.<br>
[0] 0. 0. 1.99342e-06 0. 0. 1.32894e-06 0. 0. 1.32894e-06 0. 0. 1.99342e-06 0. 0. 1.99342e-06 0. 0. 1.32894e-06 0. 0. -3.32236e-07 0. 0. -3.32236e-07 0. 0. -1.99342e-06 0. 0. -3.32236e-07 0. 0. -9.96708e-10 0. 0. -6.64472e-10 0. 0. -6.64472e-10 0. 0. -9.96708e-10 0. 0. -9.96708e-10 0. 0. -6.64472e-10 0. 0. 1.66118e-10 0. 0. 1.66118e-10 0. 0. 9.96708e-10 0. 0. 1.66118e-10<br>
[0] 1.99342e-06 0. 0. 1.99342e-06 0. 0. 1.99342e-06 0. 0. 1.32894e-06 0. 0. 1.32894e-06 0. 0. 1.32894e-06 0. 0. -3.32236e-07 0. 0. -3.32236e-07 0. 0. -3.32236e-07 0. 0. -1.99342e-06 0. 0. -9.96708e-10 0. 0. -9.96708e-10 0. 0. -9.96708e-10 0. 0. -6.64472e-10 0. 0. -6.64472e-10 0. 0. -6.64472e-10 0. 0. 1.66118e-10 0. 0. 1.66118e-10 0. 0. 1.66118e-10 0. 0. 9.96708e-10 0. 0.<br>
[0] 0. 1.99342e-06 0. 0. 1.99342e-06 0. 0. 1.99342e-06 0. 0. 1.32894e-06 0. 0. 1.32894e-06 0. 0. 1.32894e-06 0. 0. -3.32236e-07 0. 0. -3.32236e-07 0. 0. -3.32236e-07 0. 0. -1.99342e-06 0. 0. -9.96708e-10 0. 0. -9.96708e-10 0. 0. -9.96708e-10 0. 0. -6.64472e-10 0. 0. -6.64472e-10 0. 0. -6.64472e-10 0. 0. 1.66118e-10 0. 0. 1.66118e-10 0. 0. 1.66118e-10 0. 0. 9.96708e-10 0.<br>
[0] 0. 0. 1.99342e-06 0. 0. 1.99342e-06 0. 0. 1.99342e-06 0. 0. 1.32894e-06 0. 0. 1.32894e-06 0. 0. 1.32894e-06 0. 0. -3.32236e-07 0. 0. -3.32236e-07 0. 0. -3.32236e-07 0. 0. -1.99342e-06 0. 0. -9.96708e-10 0. 0. -9.96708e-10 0. 0. -9.96708e-10 0. 0. -6.64472e-10 0. 0. -6.64472e-10 0. 0. -6.64472e-10 0. 0. 1.66118e-10 0. 0. 1.66118e-10 0. 0. 1.66118e-10 0. 0. 9.96708e-10<br>
[0]PETSC ERROR: #3 DMPlexMatSetClosure() line 5480 in /home/hartig/petsc/src/dm/impl<wbr>s/plex/plex.c<br>
[0]PETSC ERROR: #4 DMPlexComputeJacobian_Internal<wbr>() line 2301 in /home/hartig/petsc/src/snes/ut<wbr>ils/dmplexsnes.c<br>
[0]PETSC ERROR: #5 DMPlexTSComputeIJacobianFEM() line 233 in /home/hartig/petsc/src/ts/util<wbr>s/dmplexts.c<br>
[0]PETSC ERROR: #6 TSComputeIJacobian_DMLocal() line 131 in /home/hartig/petsc/src/ts/util<wbr>s/dmlocalts.c<br>
[0]PETSC ERROR: #7 TSComputeIJacobian() line 882 in /home/hartig/petsc/src/ts/inte<wbr>rface/ts.c<br>
[0]PETSC ERROR: #8 SNESTSFormJacobian_Theta() line 515 in /home/hartig/petsc/src/ts/impl<wbr>s/implicit/theta/theta.c<br>
[0]PETSC ERROR: #9 SNESTSFormJacobian() line 5044 in /home/hartig/petsc/src/ts/inte<wbr>rface/ts.c<br>
[0]PETSC ERROR: #10 SNESComputeJacobian() line 2276 in /home/hartig/petsc/src/snes/in<wbr>terface/snes.c<br>
[0]PETSC ERROR: #11 SNESSolve_NEWTONLS() line 222 in /home/hartig/petsc/src/snes/im<wbr>pls/ls/ls.c<br>
[0]PETSC ERROR: #12 SNESSolve() line 3967 in /home/hartig/petsc/src/snes/in<wbr>terface/snes.c<br>
[0]PETSC ERROR: #13 TS_SNESSolve() line 171 in /home/hartig/petsc/src/ts/impl<wbr>s/implicit/theta/theta.c<br>
[0]PETSC ERROR: #14 TSStep_Theta() line 211 in /home/hartig/petsc/src/ts/impl<wbr>s/implicit/theta/theta.c<br>
[0]PETSC ERROR: #15 TSStep() line 3809 in /home/hartig/petsc/src/ts/inte<wbr>rface/ts.c<br>
<br>
</blockquote></div><br></div>
</div></div></blockquote></div><br></div>
</div></div></blockquote></div><br><br clear="all"><div><br></div>-- <br><div class="gmail_signature" data-smartmail="gmail_signature">What most experimenters take for granted before they begin their experiments is infinitely more interesting than any results to which their experiments lead.<br>-- Norbert Wiener</div>
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