[0] PetscInitialize(): PETSc successfully started: number of processors = 1 [0] PetscGetHostName(): Rejecting domainname, likely is NIS mica.(none) [0] PetscInitialize(): Running on machine: mica [0] PetscCommDuplicate(): Duplicating a communicator 140026835426112 17750160 max tags = 2147483647 [0] PetscCommDuplicate(): Using internal PETSc communicator 140026835426112 17750160 [0] PetscGetFileStat(): System call stat() succeeded on file test_drdw.bin [0] PetscTestOwnership(): System call access() succeeded on file test_drdw.bin [0] PetscFileRetrieve(): Found file test_drdw.bin [0] PetscGetFileStat(): System call stat() succeeded on file test_drdw.bin.info [0] PetscTestOwnership(): System call access() succeeded on file test_drdw.bin.info [0] PetscFileRetrieve(): Found file test_drdw.bin.info [0] PetscOptionsInsertFile(): Opened options file test_drdw.bin.info [0] PetscCommDuplicate(): Duplicating a communicator 140026835428160 17733568 max tags = 2147483647 [0] PetscCommDuplicate(): Using internal PETSc communicator 140026835428160 17733568 [0] MatStashScatterBegin_Ref(): No of messages: 0 [0] MatStashScatterBegin_Ref(): No of messages: 0 [0] MatAssemblyBegin_MPIBAIJ(): Stash has 0 entries,uses 0 mallocs. [0] MatAssemblyBegin_MPIBAIJ(): Block-Stash has 0 entries, uses 0 mallocs. [0] MatAssemblyEnd_SeqBAIJ(): Matrix size: 483840 X 483840, block size 5; storage space: 0 unneeded, 30686400 used [0] MatAssemblyEnd_SeqBAIJ(): Number of mallocs during MatSetValues is 0 [0] MatAssemblyEnd_SeqBAIJ(): Most nonzeros blocks in any row is 13 [0] MatCheckCompressedRow(): Found the ratio (num_zerorows 0)/(num_localrows 96768) < 0.6. Do not use CompressedRow routines. [0] PetscCommDuplicate(): Using internal PETSc communicator 140026835428160 17733568 [0] PetscCommDuplicate(): Using internal PETSc communicator 140026835428160 17733568 [0] PetscCommDuplicate(): Using internal PETSc communicator 140026835428160 17733568 [0] VecScatterCreate(): Special case: sequential copy [0] MatAssemblyEnd_SeqBAIJ(): Matrix size: 483840 X 0, block size 5; storage space: 0 unneeded, 0 used [0] MatAssemblyEnd_SeqBAIJ(): Number of mallocs during MatSetValues is 0 [0] MatAssemblyEnd_SeqBAIJ(): Most nonzeros blocks in any row is 0 [0] MatCheckCompressedRow(): Found the ratio (num_zerorows 96768)/(num_localrows 96768) > 0.6. Use CompressedRow routines. [0] PetscCommDuplicate(): Using internal PETSc communicator 140026835426112 17750160 [0] PetscCommDuplicate(): Using internal PETSc communicator 140026835426112 17750160 [0] PetscGetFileStat(): System call stat() succeeded on file test_drdwPre.bin [0] PetscTestOwnership(): System call access() succeeded on file test_drdwPre.bin [0] PetscFileRetrieve(): Found file test_drdwPre.bin [0] PetscGetFileStat(): System call stat() succeeded on file test_drdwPre.bin.info [0] PetscTestOwnership(): System call access() succeeded on file test_drdwPre.bin.info [0] PetscFileRetrieve(): Found file test_drdwPre.bin.info [0] PetscOptionsInsertFile(): Opened options file test_drdwPre.bin.info [0] PetscCommDuplicate(): Using internal PETSc communicator 140026835428160 17733568 [0] PetscCommDuplicate(): Using internal PETSc communicator 140026835428160 17733568 [0] MatStashScatterBegin_Ref(): No of messages: 0 [0] MatStashScatterBegin_Ref(): No of messages: 0 [0] MatAssemblyBegin_MPIBAIJ(): Stash has 0 entries,uses 0 mallocs. [0] MatAssemblyBegin_MPIBAIJ(): Block-Stash has 0 entries, uses 0 mallocs. [0] MatAssemblyEnd_SeqBAIJ(): Matrix size: 483840 X 483840, block size 5; storage space: 0 unneeded, 16680000 used [0] MatAssemblyEnd_SeqBAIJ(): Number of mallocs during MatSetValues is 0 [0] MatAssemblyEnd_SeqBAIJ(): Most nonzeros blocks in any row is 7 [0] MatCheckCompressedRow(): Found the ratio (num_zerorows 0)/(num_localrows 96768) < 0.6. Do not use CompressedRow routines. [0] PetscCommDuplicate(): Using internal PETSc communicator 140026835428160 17733568 [0] PetscCommDuplicate(): Using internal PETSc communicator 140026835428160 17733568 [0] PetscCommDuplicate(): Using internal PETSc communicator 140026835428160 17733568 [0] VecScatterCreate(): Special case: sequential copy [0] MatAssemblyEnd_SeqBAIJ(): Matrix size: 483840 X 0, block size 5; storage space: 0 unneeded, 0 used [0] MatAssemblyEnd_SeqBAIJ(): Number of mallocs during MatSetValues is 0 [0] MatAssemblyEnd_SeqBAIJ(): Most nonzeros blocks in any row is 0 [0] MatCheckCompressedRow(): Found the ratio (num_zerorows 96768)/(num_localrows 96768) > 0.6. Use CompressedRow routines. [0] PetscCommDuplicate(): Using internal PETSc communicator 140026835426112 17750160 Solving... [0] PCSetUp(): Setting up PC for first time [0] PCSetUp_GAMG(): level 0) N=483840, n data rows=5, n data cols=5, nnz/row (ave)=34, np=1 -------------------------------------------------------------------------- MPI_ABORT was invoked on rank 0 in communicator MPI_COMM_WORLD with errorcode 59. NOTE: invoking MPI_ABORT causes Open MPI to kill all MPI processes. You may or may not see output from other processes, depending on exactly when Open MPI kills them. -------------------------------------------------------------------------- ------------------------------------------------------- Primary job terminated normally, but 1 process returned a non-zero exit code.. Per user-direction, the job has been aborted. ------------------------------------------------------- -------------------------------------------------------------------------- mpirun detected that one or more processes exited with non-zero status, thus causing the job to be terminated. The first process to do so was: Process name: [[30673,1],0] Exit code: 59 --------------------------------------------------------------------------