Passing options to PETSc: -ksp_monitor -ksp_view -log_summary Solving linear system of size 137300 x 137300 (PETSc Krylov solver). 0 KSP Residual norm 6.984814267994e+02 1 KSP Residual norm 5.493325830728e+01 2 KSP Residual norm 4.386928799903e+01 3 KSP Residual norm 1.031431631122e+01 4 KSP Residual norm 9.683970801727e+00 5 KSP Residual norm 4.492681679872e+00 6 KSP Residual norm 4.340306547098e+00 7 KSP Residual norm 2.135394287667e+00 8 KSP Residual norm 2.097412712810e+00 9 KSP Residual norm 1.096236093731e+00 10 KSP Residual norm 9.535512231328e-01 11 KSP Residual norm 6.917690133823e-01 12 KSP Residual norm 5.386662543399e-01 13 KSP Residual norm 4.616502798336e-01 14 KSP Residual norm 3.102893969880e-01 15 KSP Residual norm 2.917421220343e-01 16 KSP Residual norm 1.918400191865e-01 17 KSP Residual norm 1.812755188650e-01 18 KSP Residual norm 1.158182979594e-01 19 KSP Residual norm 1.151908164682e-01 20 KSP Residual norm 9.058449170786e-02 21 KSP Residual norm 9.055898020223e-02 22 KSP Residual norm 7.425649717505e-02 23 KSP Residual norm 7.351535447599e-02 24 KSP Residual norm 6.301950557241e-02 25 KSP Residual norm 6.261047067584e-02 26 KSP Residual norm 5.359165957152e-02 27 KSP Residual norm 5.308994456210e-02 28 KSP Residual norm 4.768264761089e-02 29 KSP Residual norm 4.721831467684e-02 30 KSP Residual norm 4.403681236290e-02 31 KSP Residual norm 4.318350122247e-02 32 KSP Residual norm 4.076488155961e-02 33 KSP Residual norm 3.982012042849e-02 34 KSP Residual norm 3.751275756065e-02 35 KSP Residual norm 3.658221022369e-02 36 KSP Residual norm 3.469321601254e-02 37 KSP Residual norm 3.379481252363e-02 38 KSP Residual norm 3.255925443205e-02 39 KSP Residual norm 3.162015121674e-02 40 KSP Residual norm 3.076771637763e-02 41 KSP Residual norm 2.965658595649e-02 42 KSP Residual norm 2.898320251436e-02 43 KSP Residual norm 2.780019547061e-02 44 KSP Residual norm 2.726851737782e-02 45 KSP Residual norm 2.594327781331e-02 46 KSP Residual norm 2.566217495496e-02 47 KSP Residual norm 2.437797968484e-02 48 KSP Residual norm 2.422341873735e-02 49 KSP Residual norm 2.290120676285e-02 50 KSP Residual norm 2.285352901537e-02 51 KSP Residual norm 2.164514606185e-02 52 KSP Residual norm 2.162907078765e-02 53 KSP Residual norm 2.051414555528e-02 54 KSP Residual norm 2.051095271222e-02 55 KSP Residual norm 1.944730228799e-02 56 KSP Residual norm 1.944668418773e-02 57 KSP Residual norm 1.847189038629e-02 58 KSP Residual norm 1.846732901693e-02 59 KSP Residual norm 1.753212431887e-02 60 KSP Residual norm 1.751835459746e-02 61 KSP Residual norm 1.668094765639e-02 62 KSP Residual norm 1.664561112552e-02 63 KSP Residual norm 1.595493992865e-02 64 KSP Residual norm 1.587138592544e-02 65 KSP Residual norm 1.526674252314e-02 66 KSP Residual norm 1.516389755723e-02 67 KSP Residual norm 1.456461445420e-02 68 KSP Residual norm 1.443066937800e-02 69 KSP Residual norm 1.396237329206e-02 70 KSP Residual norm 1.377290629743e-02 71 KSP Residual norm 1.343107220724e-02 72 KSP Residual norm 1.315264418425e-02 73 KSP Residual norm 1.289666837457e-02 74 KSP Residual norm 1.258663729938e-02 75 KSP Residual norm 1.236886249713e-02 76 KSP Residual norm 1.200793893597e-02 77 KSP Residual norm 1.185150980899e-02 78 KSP Residual norm 1.150879645690e-02 79 KSP Residual norm 1.138370996242e-02 80 KSP Residual norm 1.103680924490e-02 81 KSP Residual norm 1.094774068890e-02 82 KSP Residual norm 1.057788700323e-02 83 KSP Residual norm 1.052819244959e-02 84 KSP Residual norm 1.014274382922e-02 85 KSP Residual norm 1.012114645483e-02 86 KSP Residual norm 9.761031158883e-03 87 KSP Residual norm 9.747153655619e-03 88 KSP Residual norm 9.387960157131e-03 89 KSP Residual norm 9.381828538579e-03 90 KSP Residual norm 9.014277231204e-03 91 KSP Residual norm 9.014229856726e-03 92 KSP Residual norm 8.679417056348e-03 93 KSP Residual norm 8.672530935538e-03 94 KSP Residual norm 8.401096695481e-03 95 KSP Residual norm 8.386647501312e-03 96 KSP Residual norm 8.136805688624e-03 97 KSP Residual norm 8.120877067430e-03 98 KSP Residual norm 7.876344692055e-03 99 KSP Residual norm 7.847985478810e-03 100 KSP Residual norm 7.628475446401e-03 101 KSP Residual norm 7.592179030410e-03 102 KSP Residual norm 7.404740000094e-03 103 KSP Residual norm 7.357650097477e-03 104 KSP Residual norm 7.195462011562e-03 105 KSP Residual norm 7.134532459633e-03 106 KSP Residual norm 6.995374858274e-03 107 KSP Residual norm 6.898299033748e-03 108 KSP Residual norm 6.788894145164e-03 109 KSP Residual norm 6.663166054082e-03 110 KSP Residual norm 6.576480180115e-03 111 KSP Residual norm 6.436511247560e-03 112 KSP Residual norm 6.371497085621e-03 113 KSP Residual norm 6.212877009186e-03 114 KSP Residual norm 6.162841840312e-03 115 KSP Residual norm 6.008296261843e-03 116 KSP Residual norm 5.970498088037e-03 117 KSP Residual norm 5.803609398817e-03 118 KSP Residual norm 5.782551823872e-03 119 KSP Residual norm 5.614965018938e-03 120 KSP Residual norm 5.600205150404e-03 121 KSP Residual norm 5.433132880196e-03 122 KSP Residual norm 5.425731162545e-03 123 KSP Residual norm 5.256874096972e-03 124 KSP Residual norm 5.254927993095e-03 125 KSP Residual norm 5.089163105699e-03 126 KSP Residual norm 5.089102966172e-03 127 KSP Residual norm 4.929437575546e-03 128 KSP Residual norm 4.929347790169e-03 129 KSP Residual norm 4.775351896223e-03 130 KSP Residual norm 4.775131087172e-03 131 KSP Residual norm 4.623116520749e-03 132 KSP Residual norm 4.621194521596e-03 133 KSP Residual norm 4.474968977168e-03 134 KSP Residual norm 4.467972810766e-03 135 KSP Residual norm 4.335475722927e-03 136 KSP Residual norm 4.321370236881e-03 137 KSP Residual norm 4.192673391804e-03 138 KSP Residual norm 4.169969918403e-03 139 KSP Residual norm 4.056508102829e-03 140 KSP Residual norm 4.033211133088e-03 141 KSP Residual norm 3.926240479896e-03 142 KSP Residual norm 3.898157230334e-03 143 KSP Residual norm 3.798372393385e-03 144 KSP Residual norm 3.764560363026e-03 145 KSP Residual norm 3.679026290926e-03 146 KSP Residual norm 3.636401035897e-03 147 KSP Residual norm 3.564834809452e-03 148 KSP Residual norm 3.509431881247e-03 149 KSP Residual norm 3.449437869205e-03 150 KSP Residual norm 3.391545980988e-03 151 KSP Residual norm 3.342466836526e-03 152 KSP Residual norm 3.282797985900e-03 153 KSP Residual norm 3.236187780843e-03 154 KSP Residual norm 3.176352807341e-03 155 KSP Residual norm 3.137731081773e-03 156 KSP Residual norm 3.064970523613e-03 157 KSP Residual norm 3.043173685714e-03 158 KSP Residual norm 2.956071465814e-03 159 KSP Residual norm 2.944906845505e-03 160 KSP Residual norm 2.856071804521e-03 161 KSP Residual norm 2.849329676813e-03 162 KSP Residual norm 2.760832406111e-03 163 KSP Residual norm 2.756822446599e-03 164 KSP Residual norm 2.674362715263e-03 165 KSP Residual norm 2.672426700073e-03 166 KSP Residual norm 2.592010161891e-03 167 KSP Residual norm 2.591413647724e-03 168 KSP Residual norm 2.508700856533e-03 169 KSP Residual norm 2.508655178886e-03 170 KSP Residual norm 2.427351730383e-03 171 KSP Residual norm 2.426048977689e-03 172 KSP Residual norm 2.352717573255e-03 173 KSP Residual norm 2.350063898881e-03 174 KSP Residual norm 2.279322998160e-03 175 KSP Residual norm 2.274010421713e-03 176 KSP Residual norm 2.210457546549e-03 177 KSP Residual norm 2.202113341316e-03 178 KSP Residual norm 2.144982008671e-03 179 KSP Residual norm 2.133951020469e-03 180 KSP Residual norm 2.081106686809e-03 181 KSP Residual norm 2.064012313007e-03 182 KSP Residual norm 2.020058317180e-03 183 KSP Residual norm 1.998545518086e-03 184 KSP Residual norm 1.961873939473e-03 185 KSP Residual norm 1.935792219075e-03 186 KSP Residual norm 1.906497948694e-03 187 KSP Residual norm 1.875762773903e-03 188 KSP Residual norm 1.851367084724e-03 189 KSP Residual norm 1.816317110460e-03 190 KSP Residual norm 1.795806462799e-03 191 KSP Residual norm 1.756858290038e-03 192 KSP Residual norm 1.741666680282e-03 193 KSP Residual norm 1.698062986392e-03 194 KSP Residual norm 1.689303898506e-03 195 KSP Residual norm 1.642807981113e-03 196 KSP Residual norm 1.638904306608e-03 197 KSP Residual norm 1.593028881256e-03 198 KSP Residual norm 1.591166714592e-03 199 KSP Residual norm 1.546244741796e-03 200 KSP Residual norm 1.544875627591e-03 201 KSP Residual norm 1.502370789533e-03 202 KSP Residual norm 1.500495175772e-03 203 KSP Residual norm 1.461024931520e-03 204 KSP Residual norm 1.458811768696e-03 205 KSP Residual norm 1.423249804911e-03 206 KSP Residual norm 1.421578904828e-03 207 KSP Residual norm 1.386308667308e-03 208 KSP Residual norm 1.385830483318e-03 209 KSP Residual norm 1.350490466635e-03 210 KSP Residual norm 1.350456088142e-03 211 KSP Residual norm 1.318737063084e-03 212 KSP Residual norm 1.318022566097e-03 213 KSP Residual norm 1.288152493222e-03 214 KSP Residual norm 1.285739719094e-03 215 KSP Residual norm 1.258790266827e-03 216 KSP Residual norm 1.253748922773e-03 217 KSP Residual norm 1.232016874754e-03 218 KSP Residual norm 1.225638505300e-03 219 KSP Residual norm 1.207003584855e-03 220 KSP Residual norm 1.199615759860e-03 221 KSP Residual norm 1.181319315443e-03 222 KSP Residual norm 1.171975374537e-03 223 KSP Residual norm 1.155466566306e-03 224 KSP Residual norm 1.143947780652e-03 225 KSP Residual norm 1.130291551822e-03 226 KSP Residual norm 1.116741479989e-03 227 KSP Residual norm 1.106315210888e-03 228 KSP Residual norm 1.089951820534e-03 229 KSP Residual norm 1.082894133823e-03 230 KSP Residual norm 1.063831639968e-03 231 KSP Residual norm 1.060423051198e-03 232 KSP Residual norm 1.040760147285e-03 233 KSP Residual norm 1.038948669603e-03 234 KSP Residual norm 1.018986703920e-03 235 KSP Residual norm 1.018142432958e-03 236 KSP Residual norm 9.980695764619e-04 237 KSP Residual norm 9.979515968113e-04 238 KSP Residual norm 9.793792227025e-04 239 KSP Residual norm 9.793717135410e-04 240 KSP Residual norm 9.618792461217e-04 241 KSP Residual norm 9.615337767538e-04 242 KSP Residual norm 9.447739551746e-04 243 KSP Residual norm 9.436801422838e-04 244 KSP Residual norm 9.284147767688e-04 245 KSP Residual norm 9.267607907445e-04 246 KSP Residual norm 9.133980843083e-04 247 KSP Residual norm 9.117377646607e-04 248 KSP Residual norm 8.994973201513e-04 249 KSP Residual norm 8.978136832035e-04 250 KSP Residual norm 8.862457521110e-04 251 KSP Residual norm 8.830530626220e-04 252 KSP Residual norm 8.728368040612e-04 253 KSP Residual norm 8.679056613416e-04 254 KSP Residual norm 8.587019562844e-04 255 KSP Residual norm 8.519650508993e-04 256 KSP Residual norm 8.441997185200e-04 257 KSP Residual norm 8.364430350460e-04 258 KSP Residual norm 8.299638968203e-04 259 KSP Residual norm 8.216076970142e-04 260 KSP Residual norm 8.163746492791e-04 261 KSP Residual norm 8.066411406347e-04 262 KSP Residual norm 8.028515211342e-04 263 KSP Residual norm 7.928897005764e-04 264 KSP Residual norm 7.900714115635e-04 265 KSP Residual norm 7.797479647780e-04 266 KSP Residual norm 7.775624496561e-04 267 KSP Residual norm 7.652474269250e-04 268 KSP Residual norm 7.634522920052e-04 269 KSP Residual norm 7.490739584669e-04 270 KSP Residual norm 7.478473965427e-04 271 KSP Residual norm 7.326737060656e-04 272 KSP Residual norm 7.319995713132e-04 273 KSP Residual norm 7.157869349845e-04 274 KSP Residual norm 7.155001681877e-04 275 KSP Residual norm 6.981457453348e-04 KSP Object: 1 MPI processes type: minres maximum iterations=10000, initial guess is zero tolerances: relative=1e-06, absolute=1e-15, divergence=10000 left preconditioning using PRECONDITIONED norm type for convergence test PC Object: 1 MPI processes type: hypre HYPRE BoomerAMG preconditioning HYPRE BoomerAMG: Cycle type V HYPRE BoomerAMG: Maximum number of levels 25 HYPRE BoomerAMG: Maximum number of iterations PER hypre call 1 HYPRE BoomerAMG: Convergence tolerance PER hypre call 0 HYPRE BoomerAMG: Threshold for strong coupling 0.25 HYPRE BoomerAMG: Interpolation truncation factor 0 HYPRE BoomerAMG: Interpolation: max elements per row 0 HYPRE BoomerAMG: Number of levels of aggressive coarsening 0 HYPRE BoomerAMG: Number of paths for aggressive coarsening 1 HYPRE BoomerAMG: Maximum row sums 0.9 HYPRE BoomerAMG: Sweeps down 1 HYPRE BoomerAMG: Sweeps up 1 HYPRE BoomerAMG: Sweeps on coarse 1 HYPRE BoomerAMG: Relax down symmetric-SOR/Jacobi HYPRE BoomerAMG: Relax up symmetric-SOR/Jacobi HYPRE BoomerAMG: Relax on coarse Gaussian-elimination HYPRE BoomerAMG: Relax weight (all) 1 HYPRE BoomerAMG: Outer relax weight (all) 1 HYPRE BoomerAMG: Using CF-relaxation HYPRE BoomerAMG: Measure type local HYPRE BoomerAMG: Coarsen type Falgout HYPRE BoomerAMG: Interpolation type classical linear system matrix followed by preconditioner matrix: Matrix Object: 1 MPI processes type: seqaij rows=137300, cols=137300 total: nonzeros=12249280, allocated nonzeros=12249280 total number of mallocs used during MatSetValues calls =0 using I-node routines: found 101325 nodes, limit used is 5 Matrix Object: 1 MPI processes type: seqaij rows=137300, cols=137300 total: nonzeros=12249280, allocated nonzeros=12249280 total number of mallocs used during MatSetValues calls =0 using I-node routines: found 101325 nodes, limit used is 5 ************************************************************************************************************************ *** WIDEN YOUR WINDOW TO 120 CHARACTERS. Use 'enscript -r -fCourier9' to print this document *** ************************************************************************************************************************ ---------------------------------------------- PETSc Performance Summary: ---------------------------------------------- Unknown Name on a linux-gnu-c-opt named pacotaco-xps with 1 processor, by justin Tue Jun 2 14:14:26 2015 Using Petsc Release Version 3.4.2, Jul, 02, 2013 Max Max/Min Avg Total Time (sec): 8.743e+01 1.00000 8.743e+01 Objects: 5.000e+01 1.00000 5.000e+01 Flops: 7.493e+09 1.00000 7.493e+09 7.493e+09 Flops/sec: 8.570e+07 1.00000 8.570e+07 8.570e+07 MPI Messages: 0.000e+00 0.00000 0.000e+00 0.000e+00 MPI Message Lengths: 0.000e+00 0.00000 0.000e+00 0.000e+00 MPI Reductions: 6.120e+02 1.00000 Flop counting convention: 1 flop = 1 real number operation of type (multiply/divide/add/subtract) e.g., VecAXPY() for real vectors of length N --> 2N flops and VecAXPY() for complex vectors of length N --> 8N flops Summary of Stages: ----- Time ------ ----- Flops ----- --- Messages --- -- Message Lengths -- -- Reductions -- Avg %Total Avg %Total counts %Total Avg %Total counts %Total 0: Main Stage: 8.7432e+01 100.0% 7.4925e+09 100.0% 0.000e+00 0.0% 0.000e+00 0.0% 6.110e+02 99.8% ------------------------------------------------------------------------------------------------------------------------ See the 'Profiling' chapter of the users' manual for details on interpreting output. Phase summary info: Count: number of times phase was executed Time and Flops: Max - maximum over all processors Ratio - ratio of maximum to minimum over all processors Mess: number of messages sent Avg. len: average message length (bytes) Reduct: number of global reductions Global: entire computation Stage: stages of a computation. Set stages with PetscLogStagePush() and PetscLogStagePop(). %T - percent time in this phase %f - percent flops in this phase %M - percent messages in this phase %L - percent message lengths in this phase %R - percent reductions in this phase Total Mflop/s: 10e-6 * (sum of flops over all processors)/(max time over all processors) ------------------------------------------------------------------------------------------------------------------------ Event Count Time (sec) Flops --- Global --- --- Stage --- Total Max Ratio Max Ratio Max Ratio Mess Avg len Reduct %T %f %M %L %R %T %f %M %L %R Mflop/s ------------------------------------------------------------------------------------------------------------------------ --- Event Stage 0: Main Stage ------------------------------------------------------------------------------------------------------------------------ Memory usage is given in bytes: Object Type Creations Destructions Memory Descendants' Mem. Reports information only for process 0. --- Event Stage 0: Main Stage Viewer 1 0 0 0 Index Set 6 6 4584 0 IS L to G Mapping 10 10 3850280 0 Vector 26 26 15417056 0 Vector Scatter 3 3 1932 0 Matrix 2 2 298381656 0 Preconditioner 1 1 1072 0 Krylov Solver 1 1 1160 0 ======================================================================================================================== Average time to get PetscTime(): 0 #PETSc Option Table entries: -ksp_monitor -ksp_view -log_summary #End of PETSc Option Table entries Compiled without FORTRAN kernels Compiled with full precision matrices (default) sizeof(short) 2 sizeof(int) 4 sizeof(long) 8 sizeof(void*) 8 sizeof(PetscScalar) 8 sizeof(PetscInt) 4 Configure run at: Tue Dec 17 23:10:14 2013 Configure options: --with-shared-libraries --with-debugging=0 --useThreads 0 --with-clanguage=C++ --with-c-support --with-fortran-interfaces=1 --with-mpi-dir=/usr/lib/openmpi --with-mpi-shared=1 --with-blas-lib=-lblas --with-lapack-lib=-llapack --with-blacs=1 --with-blacs-include=/usr/include --with-blacs-lib="[/usr/lib/libblacsCinit-openmpi.so,/usr/lib/libblacs-openmpi.so]" --with-scalapack=1 --with-scalapack-include=/usr/include --with-scalapack-lib=/usr/lib/libscalapack-openmpi.so --with-mumps=1 --with-mumps-include=/usr/include --with-mumps-lib="[/usr/lib/libdmumps.so,/usr/lib/libzmumps.so,/usr/lib/libsmumps.so,/usr/lib/libcmumps.so,/usr/lib/libmumps_common.so,/usr/lib/libpord.so]" --with-umfpack=1 --with-umfpack-include=/usr/include/suitesparse --with-umfpack-lib="[/usr/lib/libumfpack.so,/usr/lib/libamd.so]" --with-cholmod=1 --with-cholmod-include=/usr/include/suitesparse --with-cholmod-lib=/usr/lib/libcholmod.so --with-spooles=1 --with-spooles-include=/usr/include/spooles --with-spooles-lib=/usr/lib/libspooles.so --with-hypre=1 --with-hypre-dir=/usr --with-ptscotch=1 --with-ptscotch-include=/usr/include/scotch --with-ptscotch-lib="[/usr/lib/libptesmumps.so,/usr/lib/libptscotch.so,/usr/lib/libptscotcherr.so]" --with-fftw=1 --with-fftw-include=/usr/include --with-fftw-lib="[/usr/lib/x86_64-linux-gnu/libfftw3.so,/usr/lib/x86_64-linux-gnu/libfftw3_mpi.so]" --CXX_LINKER_FLAGS=-Wl,--no-as-needed ----------------------------------------- Libraries compiled on Tue Dec 17 23:10:14 2013 on lamiak Machine characteristics: Linux-3.2.0-37-generic-x86_64-with-Ubuntu-14.04-trusty Using PETSc directory: /build/buildd/petsc-3.4.2.dfsg1 Using PETSc arch: linux-gnu-c-opt ----------------------------------------- Using C compiler: mpicxx -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O -fPIC ${COPTFLAGS} ${CFLAGS} Using Fortran compiler: mpif90 -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O ${FOPTFLAGS} ${FFLAGS} ----------------------------------------- Using include paths: -I/build/buildd/petsc-3.4.2.dfsg1/linux-gnu-c-opt/include -I/build/buildd/petsc-3.4.2.dfsg1/include -I/build/buildd/petsc-3.4.2.dfsg1/include -I/build/buildd/petsc-3.4.2.dfsg1/linux-gnu-c-opt/include -I/usr/include -I/usr/include/suitesparse -I/usr/include/scotch -I/usr/lib/openmpi/include -I/usr/lib/openmpi/include/openmpi ----------------------------------------- Using C linker: mpicxx Using Fortran linker: mpif90 Using libraries: -L/build/buildd/petsc-3.4.2.dfsg1/linux-gnu-c-opt/lib -L/build/buildd/petsc-3.4.2.dfsg1/linux-gnu-c-opt/lib -lpetsc -L/usr/lib -ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord -lscalapack-openmpi -lHYPRE_utilities -lHYPRE_struct_mv -lHYPRE_struct_ls -lHYPRE_sstruct_mv -lHYPRE_sstruct_ls -lHYPRE_IJ_mv -lHYPRE_parcsr_ls -lcholmod -lumfpack -lamd -llapack -lblas -lX11 -lpthread -lptesmumps -lptscotch -lptscotcherr -L/usr/lib/x86_64-linux-gnu -lfftw3 -lfftw3_mpi -lm -L/usr/lib/openmpi/lib -L/usr/lib/gcc/x86_64-linux-gnu/4.8 -L/lib/x86_64-linux-gnu -lmpi_f90 -lmpi_f77 -lgfortran -lm -lgfortran -lm -lquadmath -lm -lmpi_cxx -lstdc++ -ldl -lmpi -lhwloc -lgcc_s -lpthread -ldl -----------------------------------------