<div dir="ltr">Well I used a fresh petsc clone and that worked.</div><div class="gmail_extra"><br><div class="gmail_quote">On Fri, May 29, 2015 at 1:05 PM, Mark Adams <span dir="ltr"><<a href="mailto:mfadams@lbl.gov" target="_blank">mfadams@lbl.gov</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div dir="ltr">Humm, I cleaned everything, and even cut and pasted your configure line, same thing. I am now trying with a fresh petsc clone.<div><br></div><div>I add these modules:</div><div><br></div><div><div> module load adios/1.6.0</div><div> module load cray-hdf5-parallel</div><div> module load cmake/<a href="http://2.8.11.2" target="_blank">2.8.11.2</a></div><div> module unload darshan</div></div><div><br></div><div>and I do not see this <span style="font-size:12.8000001907349px">bfort-base.txt </span>file:</div><div><br></div><div><div>10:03 edison03 master ~/petsc_install/petsc$ ll arch-xc30-opt64-intel/share</div><div>total 32</div><div>-rw-r--r-- 1 madams madams 4755 May 29 09:52 basedefs.txt</div><div>-rw-r--r-- 1 madams madams 326 May 29 09:52 blueball.gif</div><div>drwxr-x--- 2 madams madams 512 May 29 09:52 doctext</div><div>-rw-r--r-- 1 madams madams 326 May 29 09:52 greenball.gif</div><div>-rw-r--r-- 1 madams madams 1625 May 29 09:52 html.def</div><div>-rw-r--r-- 1 madams madams 1668 May 29 09:52 latex.def</div><div>drwxr-x--- 3 madams madams 512 May 29 09:52 man</div><div>-rw-r--r-- 1 madams madams 79 May 29 09:52 next.gif</div><div>-rw-r--r-- 1 madams madams 287 May 29 09:52 next.xbm</div><div>-rw-r--r-- 1 madams madams 1482 May 29 09:52 nroff.def</div><div>-rw-r--r-- 1 madams madams 79 May 29 09:52 previous.gif</div><div>-rw-r--r-- 1 madams madams 299 May 29 09:52 previous.xbm</div><div>-rw-r--r-- 1 madams madams 7353 May 29 09:52 <a href="http://pstoppm.ps" target="_blank">pstoppm.ps</a></div><div>-rw-r--r-- 1 madams madams 326 May 29 09:52 purpleball.gif</div><div>-rw-r--r-- 1 madams madams 326 May 29 09:52 redball.gif</div><div>-rw-r--r-- 1 madams madams 283 May 29 09:52 refman.def</div><div>-rw-r--r-- 1 madams madams 3151 May 29 09:52 refman.sty</div><div>-rw-r--r-- 1 madams madams 74 May 29 09:52 up.gif</div><div>-rw-r--r-- 1 madams madams 281 May 29 09:52 up.xbm</div><div>-rw-r--r-- 1 madams madams 324 May 29 09:52 yellowball.gif</div></div><div><br></div><div><br></div><div><br></div></div><div class="HOEnZb"><div class="h5"><div class="gmail_extra"><br><div class="gmail_quote">On Fri, May 29, 2015 at 11:23 AM, Satish Balay <span dir="ltr"><<a href="mailto:balay@mcs.anl.gov" target="_blank">balay@mcs.anl.gov</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">I tried building on edison - and can't reproduce this problem.<br>
<br>
./configure --COPTFLAGS="-fast -no-ipo" --CXXOPTFLAGS="-fast -no-ipo" --FOPTFLAGS="-fast -no-ipo" --with-ssl=0 --with-cc=cc --with-clib-autodetect=0 --with-cxx=CC --with-cxxlib-autodetect=0 --with-debugging=0 --with-fc=ftn --with-fortranlib-autodetect=0 --with-shared-libraries=0 --with-x=0 --with-mpiexec=aprun LIBS=-lstdc++ --with-64-bit-indices PETSC_DIR=$PWD PETSC_ARCH=arch-xc30-opt64-intel --prefix=$HOME/soft/test<br>
<br>
The error message you get is puzzling..<br>
<br>
> Unable to find bfort-base.txt config file in /global/homes/m/madams/petsc_install/petsc/arch-xc30-opt64-intel/share*******<br>
<br>
Can you attempt a build from a 'clean' repo?<br>
<br>
rm -rf arch*<br>
git clean -f -d -x<br>
./configure....<br>
<span><font color="#888888"><br>
Satish<br>
</font></span><div><div><br>
<br>
On Fri, 29 May 2015, Mark Adams wrote:<br>
<br>
> Barry, It looks like you blew it.<br>
><br>
> On Wed, May 27, 2015 at 4:03 PM, Barry Smith <<a href="mailto:bsmith@mcs.anl.gov" target="_blank">bsmith@mcs.anl.gov</a>> wrote:<br>
><br>
> ><br>
> > Apparently all people with access to the PETSc repository (i.e.<br>
> > everyone in the world with internet access) have caught a rare disease that<br>
> > has caused their fingers to fall off, making them incapable of fixing this.<br>
> ><br>
> > I have added all the PETSc enums to this file in master and next. Make<br>
> > sure you run make allfortranstubs to regenerate the stubs.<br>
> ><br>
> > Barry<br>
> ><br>
> ><br>
> ><br>
> > > On May 27, 2015, at 2:15 PM, Mark Adams <<a href="mailto:mfadams@lbl.gov" target="_blank">mfadams@lbl.gov</a>> wrote:<br>
> > ><br>
> > > FYI, this does not seem to be fixed.<br>
> > ><br>
> > > On Sat, Apr 18, 2015 at 5:49 AM, Barry Smith <<a href="mailto:bsmith@mcs.anl.gov" target="_blank">bsmith@mcs.anl.gov</a>> wrote:<br>
> > ><br>
> > > Looks like a bunch of these things are missing from<br>
> > lib/petsc/conf/bfort-petsc.txt it should be listed under native<br>
> > ><br>
> > > Barry<br>
> > ><br>
> > ><br>
> > ><br>
> > > > On Apr 17, 2015, at 4:43 PM, Matthew Knepley <<a href="mailto:knepley@gmail.com" target="_blank">knepley@gmail.com</a>><br>
> > wrote:<br>
> > > ><br>
> > > > Does bfort have to be told that PCCompositeType is an enum?<br>
> > > ><br>
> > > > Matt "bfort's biggest fan"<br>
> > > ><br>
> > > > On Fri, Apr 17, 2015 at 4:37 PM, Mark Adams <<a href="mailto:mfadams@lbl.gov" target="_blank">mfadams@lbl.gov</a>> wrote:<br>
> > > > It looks like fieldsplitf.c has an extra PetscToPointer. type is<br>
> > already a pointer:<br>
> > > ><br>
> > > > PETSC_EXTERN void PETSC_STDCALL pcfieldsplitgettype_(PC<br>
> > pc,PCCompositeType *type, int *__ierr ){<br>
> > > > *__ierr = PCFieldSplitGetType(<br>
> > > > (PC)PetscToPointer((pc) ),<br>
> > > > (PCCompositeType* )PetscToPointer((type) ));<br>
> > > > }<br>
> > > ><br>
> > > > On Fri, Apr 17, 2015 at 4:12 PM, Barry Smith <<a href="mailto:bsmith@mcs.anl.gov" target="_blank">bsmith@mcs.anl.gov</a>><br>
> > wrote:<br>
> > > ><br>
> > > > Likely need to run in the debugger to see what generates the error.<br>
> > Perhaps a missing ierr?<br>
> > > ><br>
> > > > Barry<br>
> > > ><br>
> > > ><br>
> > > > > On Apr 17, 2015, at 9:10 AM, Mark Adams <<a href="mailto:mfadams@lbl.gov" target="_blank">mfadams@lbl.gov</a>> wrote:<br>
> > > > ><br>
> > > > > I declare<br>
> > > > ><br>
> > > > > PCCompositeType::pcctype<br>
> > > > ><br>
> > > > > But PCFieldSplitGetType does not seem to like it?<br>
> > > > ><br>
> > > > > Mark<br>
> > > > ><br>
> > > > > [1]PETSC ERROR: --------------------- Error Message<br>
> > --------------------------------------------------------------<br>
> > > > > [1]PETSC ERROR: Invalid pointer<br>
> > > > > [1]PETSC ERROR: Invalid Pointer to Int: Parameter # 2<br>
> > > > > [1]PETSC ERROR: See<br>
> > <a href="http://www.mcs.anl.gov/petsc/documentation/faq.html" target="_blank">http://www.mcs.anl.gov/petsc/documentation/faq.html</a> for trouble shooting.<br>
> > > > > [1]PETSC ERROR: Petsc Development GIT revision:<br>
> > v3.5.3-2702-g1f714da GIT Date: 2015-04-16 11:32:06 -0500<br>
> > > > > [1]PETSC ERROR: ../../XGC1_3/xgc-em on a arch-macosx-gnu-g named<br>
> > MacBook-Pro.local by markadams Fri Apr 17 10:06:09 2015<br>
> > > > > [1]PETSC ERROR: Configure options --download-hypre=1<br>
> > --download-p4est --download-superlu=1 --download-mumps --download-scalapack<br>
> > --download-superlu_dist=1 --download-parmetis=1 --download-metis=1<br>
> > --download-triangle=1 --with-hdf5-dir=/Users/markadams/Codes/hdf5<br>
> > --with-x=0 --with-debugging=1 PETSC_ARCH=arch-macosx-gnu-g<br>
> > > > > [1]PETSC ERROR: #1 PCFieldSplitGetType() line 2046 in<br>
> > /Users/markadams/Codes/petsc/src/ksp/pc/impls/fieldsplit/fieldsplit.c<br>
> > > > ><br>
> > > ><br>
> > > ><br>
> > > ><br>
> > > ><br>
> > > ><br>
> > > > --<br>
> > > > What most experimenters take for granted before they begin their<br>
> > experiments is infinitely more interesting than any results to which their<br>
> > experiments lead.<br>
> > > > -- Norbert Wiener<br>
> > ><br>
> > ><br>
> ><br>
> ><br>
><br>
<br>
</div></div></blockquote></div><br></div>
</div></div></blockquote></div><br></div>