Pushing language C Popping language C Pushing language CUDA Popping language CUDA Pushing language Cxx Popping language Cxx Pushing language FC Popping language FC =============================================================================== ** Cygwin-python detected. Threads do not work correctly. *** ** Disabling thread usage for this run of ./configure ******* =============================================================================== ================================================================================ ================================================================================ Starting Configure Run at Mon Feb 9 16:02:54 2015 Configure Options: --configModules=PETSc.Configure --optionsModule=PETSc.compilerOptions PETSC_ARCH=windows_superludist --with-cxx="win32fe cl" --with-fc=0 --with-cc="win32fe cl" --with-x=0 --LIBS="/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib" --with-mpi4py=0 --with-mpi-mpiexec="/cygdrive/c/Program Files (x86)/MPICH2/bin/mpiexec" --with-mpi-include="/cygdrive/c/Program Files (x86)/MPICH2/include" --with-mpi-lib="[/cygdrive/c/Program Files (x86)/MPICH2/lib/mpi.lib]" --with-blas-lapack-lib="[/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/lib/BLAS.lib,/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/lib/clapack.lib]" --with-metis-include=/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include --with-metis-lib="[/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib]" --with-parmetis=1 --with-parmetis-include=/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include --with-parmetis-lib="[/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib]" --with-external-packages-dir=/cygdrive/c/cygwin/packages --CFLAGS="-I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include" --CXXFLAGS=" -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include" --localonly --useThreads=0 Working directory: /cygdrive/c/cygwin/packages/petsc-3.4.5 Machine platform: ('CYGWIN_NT-6.1-WOW64', 'PO-51052', '1.7.33-2(0.280/5/3)', '2014-11-13 15:45', 'i686', '') Python version: 2.7.8 (default, Jul 28 2014, 01:34:03) [GCC 4.8.3] ================================================================================ Pushing language C Popping language C Pushing language CUDA Popping language CUDA Pushing language Cxx Popping language Cxx Pushing language FC Popping language FC ================================================================================ TEST configureExternalPackagesDir from config.framework(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/framework.py:821) TESTING: configureExternalPackagesDir from config.framework(config/BuildSystem/config/framework.py:821) ================================================================================ TEST configureDebuggers from PETSc.utilities.debuggers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/PETSc/utilities/debuggers.py:22) TESTING: configureDebuggers from PETSc.utilities.debuggers(config/PETSc/utilities/debuggers.py:22) Find a default debugger and determine its arguments Checking for program /usr/bin/gdb...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 9.0/Common7/IDE/gdb...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 9.0/VC/BIN/gdb...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 9.0/Common7/Tools/gdb...not found Checking for program /cygdrive/c/windows/Microsoft.NET/Framework/v3.5/gdb...not found Checking for program /cygdrive/c/windows/Microsoft.NET/Framework/v2.0.50727/gdb...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 9.0/VC/VCPackages/gdb...not found Checking for program /cygdrive/c/Program Files/Microsoft SDKs/Windows/v6.0A/bin/gdb...not found Checking for program /cygdrive/c/Program Files (x86)/NVIDIA Corporation/PhysX/Common/gdb...not found Checking for program /cygdrive/c/windows/system32/gdb...not found Checking for program /cygdrive/c/windows/gdb...not found Checking for program /cygdrive/c/windows/System32/Wbem/gdb...not found Checking for program /cygdrive/c/windows/System32/WindowsPowerShell/v1.0/gdb...not found Checking for program /cygdrive/c/Program Files/Intel/WiFi/bin/gdb...not found Checking for program /cygdrive/c/Program Files/Common Files/Intel/WirelessCommon/gdb...not found Checking for program /cygdrive/c/Program Files/MATLAB/R2014b/runtime/win64/gdb...not found Checking for program /cygdrive/c/Program Files/MATLAB/R2014b/bin/gdb...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft SQL Server/90/Tools/binn/gdb...not found Checking for program /cygdrive/c/Program Files (x86)/Lua/5.1/gdb...not found Checking for program /cygdrive/c/Program Files (x86)/Lua/5.1/clibs/gdb...not found Checking for program /cygdrive/c/cygwin/packages/petsc-3.4.5/bin/win32fe/gdb...not found Checking for program /home/fraphel/gdb...not found Checking for program /usr/bin/dbx...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 9.0/Common7/IDE/dbx...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 9.0/VC/BIN/dbx...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 9.0/Common7/Tools/dbx...not found Checking for program /cygdrive/c/windows/Microsoft.NET/Framework/v3.5/dbx...not found Checking for program /cygdrive/c/windows/Microsoft.NET/Framework/v2.0.50727/dbx...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 9.0/VC/VCPackages/dbx...not found Checking for program /cygdrive/c/Program Files/Microsoft SDKs/Windows/v6.0A/bin/dbx...not found Checking for program /cygdrive/c/Program Files (x86)/NVIDIA Corporation/PhysX/Common/dbx...not found Checking for program /cygdrive/c/windows/system32/dbx...not found Checking for program /cygdrive/c/windows/dbx...not found Checking for program /cygdrive/c/windows/System32/Wbem/dbx...not found Checking for program /cygdrive/c/windows/System32/WindowsPowerShell/v1.0/dbx...not found Checking for program /cygdrive/c/Program Files/Intel/WiFi/bin/dbx...not found Checking for program /cygdrive/c/Program Files/Common Files/Intel/WirelessCommon/dbx...not found Checking for program /cygdrive/c/Program Files/MATLAB/R2014b/runtime/win64/dbx...not found Checking for program /cygdrive/c/Program Files/MATLAB/R2014b/bin/dbx...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft SQL Server/90/Tools/binn/dbx...not found Checking for program /cygdrive/c/Program Files (x86)/Lua/5.1/dbx...not found Checking for program /cygdrive/c/Program Files (x86)/Lua/5.1/clibs/dbx...not found Checking for program /cygdrive/c/cygwin/packages/petsc-3.4.5/bin/win32fe/dbx...not found Checking for program /home/fraphel/dbx...not found Checking for program /usr/bin/xdb...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 9.0/Common7/IDE/xdb...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 9.0/VC/BIN/xdb...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 9.0/Common7/Tools/xdb...not found Checking for program /cygdrive/c/windows/Microsoft.NET/Framework/v3.5/xdb...not found Checking for program /cygdrive/c/windows/Microsoft.NET/Framework/v2.0.50727/xdb...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 9.0/VC/VCPackages/xdb...not found Checking for program /cygdrive/c/Program Files/Microsoft SDKs/Windows/v6.0A/bin/xdb...not found Checking for program /cygdrive/c/Program Files (x86)/NVIDIA Corporation/PhysX/Common/xdb...not found Checking for program /cygdrive/c/windows/system32/xdb...not found Checking for program /cygdrive/c/windows/xdb...not found Checking for program /cygdrive/c/windows/System32/Wbem/xdb...not found Checking for program /cygdrive/c/windows/System32/WindowsPowerShell/v1.0/xdb...not found Checking for program /cygdrive/c/Program Files/Intel/WiFi/bin/xdb...not found Checking for program /cygdrive/c/Program Files/Common Files/Intel/WirelessCommon/xdb...not found Checking for program /cygdrive/c/Program Files/MATLAB/R2014b/runtime/win64/xdb...not found Checking for program /cygdrive/c/Program Files/MATLAB/R2014b/bin/xdb...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft SQL Server/90/Tools/binn/xdb...not found Checking for program /cygdrive/c/Program Files (x86)/Lua/5.1/xdb...not found Checking for program /cygdrive/c/Program Files (x86)/Lua/5.1/clibs/xdb...not found Checking for program /cygdrive/c/cygwin/packages/petsc-3.4.5/bin/win32fe/xdb...not found Checking for program /home/fraphel/xdb...not found Checking for program /usr/bin/dsymutil...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 9.0/Common7/IDE/dsymutil...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 9.0/VC/BIN/dsymutil...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 9.0/Common7/Tools/dsymutil...not found Checking for program /cygdrive/c/windows/Microsoft.NET/Framework/v3.5/dsymutil...not found Checking for program /cygdrive/c/windows/Microsoft.NET/Framework/v2.0.50727/dsymutil...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 9.0/VC/VCPackages/dsymutil...not found Checking for program /cygdrive/c/Program Files/Microsoft SDKs/Windows/v6.0A/bin/dsymutil...not found Checking for program /cygdrive/c/Program Files (x86)/NVIDIA Corporation/PhysX/Common/dsymutil...not found Checking for program /cygdrive/c/windows/system32/dsymutil...not found Checking for program /cygdrive/c/windows/dsymutil...not found Checking for program /cygdrive/c/windows/System32/Wbem/dsymutil...not found Checking for program /cygdrive/c/windows/System32/WindowsPowerShell/v1.0/dsymutil...not found Checking for program /cygdrive/c/Program Files/Intel/WiFi/bin/dsymutil...not found Checking for program /cygdrive/c/Program Files/Common Files/Intel/WirelessCommon/dsymutil...not found Checking for program /cygdrive/c/Program Files/MATLAB/R2014b/runtime/win64/dsymutil...not found Checking for program /cygdrive/c/Program Files/MATLAB/R2014b/bin/dsymutil...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft SQL Server/90/Tools/binn/dsymutil...not found Checking for program /cygdrive/c/Program Files (x86)/Lua/5.1/dsymutil...not found Checking for program /cygdrive/c/Program Files (x86)/Lua/5.1/clibs/dsymutil...not found Checking for program /cygdrive/c/cygwin/packages/petsc-3.4.5/bin/win32fe/dsymutil...not found Checking for program /home/fraphel/dsymutil...not found Defined make macro "DSYMUTIL" to "true" ================================================================================ TEST configureCLanguage from PETSc.utilities.languages(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/PETSc/utilities/languages.py:28) TESTING: configureCLanguage from PETSc.utilities.languages(config/PETSc/utilities/languages.py:28) Choose whether to compile the PETSc library using a C or C++ compiler C language is C Defined "CLANGUAGE_C" to "1" ================================================================================ TEST configureFortranLanguage from PETSc.utilities.languages(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/PETSc/utilities/languages.py:37) TESTING: configureFortranLanguage from PETSc.utilities.languages(config/PETSc/utilities/languages.py:37) Turn on Fortran bindings Using Fortran ================================================================================ TEST configureMake from config.programs(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/programs.py:24) TESTING: configureMake from config.programs(config/BuildSystem/config/programs.py:24) Check various things about make Checking for program /usr/bin/make...found Defined make macro "MAKE" to "/usr/bin/make" Checking for program /usr/bin/strings...found Defined make macro "STRINGS" to "/usr/bin/strings" sh: /usr/bin/strings /usr/bin/make Executing: /usr/bin/strings /usr/bin/make sh: !This program cannot be run in DOS mode. .text P`.data .rdata `@/4 0@.bss .idata $%@B $@8B $d@B t&<[ %<*t1fB $SfB $XfB $xfB $kbB $/fB [^_] [^_] _gmk _setf $(hB $RhB $phB tLWV 50"C $TiB $$jB $EjB $HjB 8-tN [^_] [^_] DT$$ $(MA KEOV ERRI DES) $(-* -com mand -var iabl es-*f $(-* -eva l-fl ags- $%kB -- $,kB [^_] L$(~j $TlB D$Nc $\kB |$(9 \[^_] $0lB [^_] =0"C UWVS 9D$@ 9D$@ ,[^_] 9t$@ ;t$@u UWVS ,[^_] UWVS [^_] |:tD ,[^_] ,[^_] D$p9D$ 3D$|3T$x [^_] [^_] [^_] [^_] [^_] [^_] [^_] [^_] x}< ty ,[^_] L[^_] L[^_] [^_] [^_] UWVS tl<\ \[^_] D$L= |$4t ;D$0 t$L1 tuf [^_] [^_] UWVS T$$t |$,1 D$(+D$$ <[^_] <[^_] l$(+l$$ t:9z [^_] [^_] UWVS [^_] ,[^_] UWVS ,[^_] ,[^_] UWVS ,[^_] ,[^_] UWVS [^_] UWVS [^_] T$<1 D$ t`1 T$<1 UWVS ,[^_] UWVS =0"C [^_] -0"C T$,9T$ =0"C D$81 ;l$, T$,9T$ 9l$, ;l$,u UWVS [^_] [^_] <[tO <*t+qB $`qB $LrB $tmB $.rB $#rB $fqB $xqB $8oB .out .a .ln .o .c .cc .C .cpp .p .f .F .m .r .y .l .ym .yl .s .S .mod .sym .def .h .info .dvi .tex .texinfo .texi .txinfo .w .ch .web .sh .elc .el /bin/sh #;"*?[]&|<>(){}$`^~! cyggcc_s-1.dll __register_frame_info cyggcj-13.dll _Jv_RegisterClasses __deregister_frame_info attempt to use unsupported feature: '%s' touch: Archive '%s' does not exist touch: '%s' is not a valid archive touch: touch: Member '%s' does not exist in '%s' touch: Bad return code from ar_member_touch on '%s' ! ARFILENAMES/ *** [%s] Archive member '%s' may be bogus; not deleted *** Archive member '%s' may be bogus; not deleted *** [%s] Deleting file '%s' *** Deleting file '%s' unlink: .SUFFIXES Recipe has too many lines (%ud) $(MAKE) ${MAKE} kill # recipe to execute (built-in): (from '%s', line %lu): %c%.*s .SUFFIXES SUFFIXES $(LINK.o) $^ $(LOADLIBES) $(LDLIBS) -o $@ $(LINK.s) $^ $(LOADLIBES) $(LDLIBS) -o $@ $(LINK.S) $^ $(LOADLIBES) $(LDLIBS) -o $@ $(LINK.c) $^ $(LOADLIBES) $(LDLIBS) -o $@ $(LINK.cc) $^ $(LOADLIBES) $(LDLIBS) -o $@ $(LINK.C) $^ $(LOADLIBES) $(LDLIBS) -o $@ .cpp $(LINK.cpp) $^ $(LOADLIBES) $(LDLIBS) -o $@ $(LINK.f) $^ $(LOADLIBES) $(LDLIBS) -o $@ $(LINK.m) $^ $(LOADLIBES) $(LDLIBS) -o $@ $(LINK.p) $^ $(LOADLIBES) $(LDLIBS) -o $@ $(LINK.F) $^ $(LOADLIBES) $(LDLIBS) -o $@ $(LINK.r) $^ $(LOADLIBES) $(LDLIBS) -o $@ .mod $(COMPILE.mod) -o $@ -e $@ $^ .def.sym $(COMPILE.def) -o $@ $< cat $< >$@ chmod a+x $@ .s.o $(COMPILE.s) -o $@ $< .S.o $(COMPILE.S) -o $@ $< .c.o $(COMPILE.c) $(OUTPUT_OPTION) $< .cc.o $(COMPILE.cc) $(OUTPUT_OPTION) $< .C.o $(COMPILE.C) $(OUTPUT_OPTION) $< .cpp.o $(COMPILE.cpp) $(OUTPUT_OPTION) $< .f.o $(COMPILE.f) $(OUTPUT_OPTION) $< .m.o $(COMPILE.m) $(OUTPUT_OPTION) $< .p.o $(COMPILE.p) $(OUTPUT_OPTION) $< .F.o $(COMPILE.F) $(OUTPUT_OPTION) $< .r.o $(COMPILE.r) $(OUTPUT_OPTION) $< .mod.o $(COMPILE.mod) -o $@ $< .c.ln $(LINT.c) -C$* $< .y.ln $(YACC.y) $< $(LINT.c) -C$* y.tab.c $(RM) y.tab.c .l.ln @$(RM) $*.c $(LEX.l) $< > $*.c $(LINT.c) -i $*.c -o $@ $(RM) $*.c .y.c $(YACC.y) $< mv -f y.tab.c $@ .l.c @$(RM) $@ $(LEX.l) $< > $@ .ym.m $(YACC.m) $< mv -f y.tab.c $@ .lm.m @$(RM) $@ $(LEX.m) $< > $@ .F.f $(PREPROCESS.F) $(OUTPUT_OPTION) $< .r.f $(PREPROCESS.r) $(OUTPUT_OPTION) $< .l.r $(LEX.l) $< > $@ mv -f lex.yy.r $@ .S.s $(PREPROCESS.S) $< > $@ .texinfo.info $(MAKEINFO) $(MAKEINFO_FLAGS) $< -o $@ .texi.info .txinfo.info .tex.dvi $(TEX) $< .texinfo.dvi $(TEXI2DVI) $(TEXI2DVI_FLAGS) $< .texi.dvi .txinfo.dvi .w.c $(CTANGLE) $< - $@ .web.p $(TANGLE) $< .w.tex $(CWEAVE) $< - $@ .web.tex $(WEAVE) $< $(AR) $(ARFLAGS) $@ $< %.out @rm -f $@ cp $< $@ %.w %.ch $(CTANGLE) $^ $@ %.tex $(CWEAVE) $^ $@ $(CHECKOUT,v) RCS/%,v RCS/% $(GET) $(GFLAGS) $(SCCS_OUTPUT_OPTION) $< SCCS/s.% ARFLAGS OBJC CHECKOUT,v +$(if $(wildcard $@),,$(CO) $(COFLAGS) $< $@) COFLAGS $(CC) -E $(FC) F77FLAGS $(FFLAGS) LINT lint YACC yacc MAKEINFO makeinfo TEXI2DVI texi2dvi WEAVE weave CWEAVE cweave TANGLE tangle CTANGLE ctangle rm -f LINK.o $(CC) $(LDFLAGS) $(TARGET_ARCH) COMPILE.c $(CC) $(CFLAGS) $(CPPFLAGS) $(TARGET_ARCH) -c LINK.c $(CC) $(CFLAGS) $(CPPFLAGS) $(LDFLAGS) $(TARGET_ARCH) COMPILE.m $(OBJC) $(OBJCFLAGS) $(CPPFLAGS) $(TARGET_ARCH) -c LINK.m $(OBJC) $(OBJCFLAGS) $(CPPFLAGS) $(LDFLAGS) $(TARGET_ARCH) COMPILE.cc $(CXX) $(CXXFLAGS) $(CPPFLAGS) $(TARGET_ARCH) -c COMPILE.C $(COMPILE.cc) COMPILE.cpp LINK.cc $(CXX) $(CXXFLAGS) $(CPPFLAGS) $(LDFLAGS) $(TARGET_ARCH) LINK.C $(LINK.cc) LINK.cpp YACC.y $(YACC) $(YFLAGS) LEX.l $(LEX) $(LFLAGS) -t YACC.m LEX.m COMPILE.f $(FC) $(FFLAGS) $(TARGET_ARCH) -c LINK.f $(FC) $(FFLAGS) $(LDFLAGS) $(TARGET_ARCH) COMPILE.F $(FC) $(FFLAGS) $(CPPFLAGS) $(TARGET_ARCH) -c LINK.F $(FC) $(FFLAGS) $(CPPFLAGS) $(LDFLAGS) $(TARGET_ARCH) COMPILE.r $(FC) $(FFLAGS) $(RFLAGS) $(TARGET_ARCH) -c LINK.r $(FC) $(FFLAGS) $(RFLAGS) $(LDFLAGS) $(TARGET_ARCH) COMPILE.def $(M2C) $(M2FLAGS) $(DEFFLAGS) $(TARGET_ARCH) COMPILE.mod $(M2C) $(M2FLAGS) $(MODFLAGS) $(TARGET_ARCH) COMPILE.p $(PC) $(PFLAGS) $(CPPFLAGS) $(TARGET_ARCH) -c LINK.p $(PC) $(PFLAGS) $(CPPFLAGS) $(LDFLAGS) $(TARGET_ARCH) LINK.s $(CC) $(ASFLAGS) $(LDFLAGS) $(TARGET_MACH) COMPILE.s $(AS) $(ASFLAGS) $(TARGET_MACH) LINK.S $(CC) $(ASFLAGS) $(CPPFLAGS) $(LDFLAGS) $(TARGET_MACH) COMPILE.S $(CC) $(ASFLAGS) $(CPPFLAGS) $(TARGET_MACH) -c PREPROCESS.S $(CC) -E $(CPPFLAGS) PREPROCESS.F $(FC) $(FFLAGS) $(CPPFLAGS) $(TARGET_ARCH) -F PREPROCESS.r $(FC) $(FFLAGS) $(RFLAGS) $(TARGET_ARCH) -F LINT.c $(LINT) $(LINTFLAGS) $(CPPFLAGS) $(TARGET_ARCH) OUTPUT_OPTION -o $@ .LIBPATTERNS lib%.so lib%.a GNUMAKEFLAGS INTERNAL: readdir: %s # Directories # %s: could not be stat'd. # %s (device %ld, inode %ld): could not be opened. # %s (device %ld, inode %ld): files, impossibilities so far. impossibilities in %lu directories. Recursive variable '%s' references itself (eventually) unterminated variable reference warning: undefined variable '%.*s' %s: Field '%s' not cached: %s name hname vpath stem Recipe was specified for file '%s' at %s:%lu, Recipe for file '%s' was found by implicit rule search, but '%s' is now considered the same file as '%s'. Recipe for '%s' will be ignored in favor of the one for '%s'. can't rename single-colon '%s' to double-colon '%s' can't rename double-colon '%s' to single-colon '%s' *** Deleting intermediate file '%s' Removing intermediate files... unlink: .SUFFIXES .PRECIOUS .LOW_RESOLUTION_TIME .PHONY .INTERMEDIATE .SECONDARY .EXPORT_ALL_VARIABLES .IGNORE .SILENT .NOTPARALLEL %04d-%02d-%02d %02d:%02d:%02d .%09d Current time %s: Timestamp out of range; substituting %s | %s .RECIPEPREFIX = # Not a target: %s:%s # Precious file (prerequisite of .PRECIOUS). # Phony target (prerequisite of .PHONY). # Command line target. # A default, MAKEFILES, or -include/sinclude makefile. # Builtin rule # Implicit rule search has been done. # Implicit rule search has not been done. # Implicit/static pattern stem: '%s' # File is an intermediate prerequisite. # Also makes: # Modification time never checked. # File does not exist. # File is very old. # Last modified %s # File has been updated. # File has not been updated. # Recipe currently running (THIS IS A BUG). # Dependencies recipe running (THIS IS A BUG). # Successfully updated. # Needs to be updated (-q is set). # Failed to be updated. # Files # files hash-table stats: open: %s: %s write: %s: %s Invalid file operation: %s insufficient number of arguments (%d) to function '%s' unimplemented on this platform: function '%s' Internal error: func_error: '%s' warning: undefined variable '%.*s' undefined default environment file environment override command line override automatic recursive simple %s: '%s' non-numeric first argument to 'wordlist' function non-numeric second argument to 'wordlist' function invalid first argument to 'wordlist' function: '%d' non-numeric first argument to 'word' function first argument to 'word' function must be greater than 0 %s:%lu: pipe fork Cleaning up temporary batch file %s unterminated call to function '%s': missing '%c' Empty function name Invalid function name: %s Function name too long: %s Invalid minimum argument count (%d) for function %s Invalid maximum argument count (%d) for function %s abspath addprefix addsuffix basename notdir subst suffix filter filter-out findstring firstword flavor join lastword patsubst realpath shell sort strip wildcard word wordlist words origin foreach call info error warning value eval POSIXLY_CORRECT %s: option '%s' is ambiguous %s: option '--%s' doesn't allow an argument %s: option '%c%s' doesn't allow an argument %s: option '%s' requires an argument %s: unrecognized option '--%s' %s: unrecognized option '%c%s' %s: illegal option -- %c %s: invalid option -- %c %s: option requires an argument -- %c %s: option '-W %s' is ambiguous %s: option '-W %s' doesn't allow an argument Avoiding implicit rule recursion. Stem too long: '%.*s'. Trying pattern rule with stem '%.*s'. Rejecting impossible rule prerequisite '%s'. Rejecting impossible implicit prerequisite '%s'. Trying rule prerequisite '%s'. Trying implicit prerequisite '%s'. Found prerequisite '%s' as VPATH '%s' Looking for a rule with intermediate file '%s'. Looking for an implicit rule for '%s'. Looking for archive-member implicit rule for '%s'. INTERNAL: Freeing child %p (%s) but no tokens left! write jobserver Released token for child %p (%s). *** (core dumped) (ignored) %s:%lu %s: recipe for target '%s' failed %s[%s] Error %d%s %s[%s] %s%s%s %s (line %d) Bad shell context (!unixy && !batch_mode_shell) /netrel/src/make-4.0-2/job.c %s: Command not found SHELL %s: Shell program not found execvp: $(SHELL) $(.SHELLFLAGS) $(IFS) fork cannot enforce load limits on this operating system cannot enforce load limit: getloadavg Estimated system load = %f (actual = %f) (max requested = %f) (remote) Putting child %p (%s) PID %s%s on the chain. *** Waiting for unfinished jobs.... Live child %p (%s) PID %s %s remote_status wait Reaping losing child %p PID %s %s Reaping winning child %p PID %s %s Cleaning up temp batch file %s Cleaning up temp batch file %s failed (%d) .DELETE_ON_ERROR Removing child %p PID %s%s from chain. don't Need a job token; we %shave children Duplicate the job FD INTERNAL: no children as we go to sleep on read Obtained token for child %p (%s). read jobs pipe Read returned EBADF. %s: target '%s' does not exist %s: update target '%s' due to: %s bash rksh dash break case continue eval exec exit export login logout read readonly shift switch test times trap ulimit umask unset while Empty symbol name for load: %s $(.LOADED) Loading symbol %s from %s Failed to open global symbol table: %s plugin_is_GPL_compatible Loaded object %s is not declared to be GPL compatible Failed to load symbol %s from %s: %s .LOADED dlclose %sGNU Make %s %sBuilt for %s %sBuilt for %s (%s) %sCopyright (C) 1988-2013 Free Software Foundation, Inc. %sLicense GPLv3+: GNU GPL version 3 or later %sThis is free software: you are free to change and redistribute it. %sThere is NO WARRANTY, to the extent permitted by law. # Make data base, printed on %s # Finished Make data base on %s INTERNAL: Exiting with %u jobserver tokens (should be 0)! write INTERNAL: Exiting with %u jobserver tokens available; should be %u! empty string invalid as file name MAKECMDGOALS MFLAGS MAKEFLAGS the '%s%s' option requires a non-empty string argument the '-%c' option requires a positive integer argument Usage: %s [options] [target] ... This program built for %s This program built for %s (%s) Report bugs to unknown debug level specification '%s' none line target recurse unknown output-sync type '%s' internal error: multiple --sync-mutex options /tmp /usr/share/locale make getcwd .VARIABLES .RECIPEPREFIX .SHELLFLAGS target-specific order-only second-expansion else-if shortest-stem undefine oneshell archives jobserver output-sync check-symlink load .FEATURES MAKE_RESTARTS SHELL GNUMAKEFLAGS MAKELEVEL internal error: multiple --jobserver-fds options %d,%d internal error: invalid --jobserver-fds string '%s' Jobserver client (fds %d,%d) warning: -jN forced in submake: disabling jobserver mode. dup jobserver warning: jobserver unavailable: using -j1. Add '+' to parent make rule. MAKE_COMMAND $(MAKE_COMMAND) MAKE -*-command-variables-*- ${-*-command-variables-*-} MAKEOVERRIDES CURDIR .DEFAULT .DEFAULT_GOAL Makefile from standard input specified twice. TMPDIR GmXXXXXX fopen (temporary file) fwrite (temporary file) -*-eval-flags-*- SUFFIXES creating jobs pipe init jobserver pipe Updating makefiles.... Makefile '%s' might loop; not remaking it. Failed to remake makefile '%s'. Included makefile '%s' was not found. Makefile '%s' was not found chdir Re-executing[%u]: MAKELEVEL= %s=%u MAKE_RESTARTS= MAKE_RESTARTS=%s%u unlink (temporary file): .DEFAULT_GOAL contains more than one target No targets specified and no makefile found No targets Updating goal targets.... warning: Clock skew detected. Your build may be incomplete. Couldn't change back to original directory. always-make environment-overrides help ignore-errors keep-going check-symlink-times just-print print-data-base question no-builtin-rules no-builtin-variables silent no-keep-going touch version print-directory directory file include-dir jobs load-average old-file output-sync what-if basic debug jobserver-fds trace no-print-directory warn-undefined-variables eval sync-mutex quiet stop new-file assume-new assume-old max-load dry-run recon makefile Options: -b, -m Ignored for compatibility. -B, --always-make Unconditionally make all targets. -C DIRECTORY, --directory=DIRECTORY Change to DIRECTORY before doing anything. -d Print lots of debugging information. --debug[=FLAGS] Print various types of debugging information. -e, --environment-overrides Environment variables override makefiles. --eval=STRING Evaluate STRING as a makefile statement. -f FILE, --file=FILE, --makefile=FILE Read FILE as a makefile. -h, --help Print this message and exit. -i, --ignore-errors Ignore errors from recipes. -I DIRECTORY, --include-dir=DIRECTORY Search DIRECTORY for included makefiles. -j [N], --jobs[=N] Allow N jobs at once; infinite jobs with no arg. -k, --keep-going Keep going when some targets can't be made. -l [N], --load-average[=N], --max-load[=N] Don't start multiple jobs unless load is below N. -L, --check-symlink-times Use the latest mtime between symlinks and target. -n, --just-print, --dry-run, --recon Don't actually run any recipe; just print them. -o FILE, --old-file=FILE, --assume-old=FILE Consider FILE to be very old and don't remake it. -O[TYPE], --output-sync[=TYPE] Synchronize output of parallel jobs by TYPE. -p, --print-data-base Print make's internal database. -q, --question Run no recipe; exit status says if up to date. -r, --no-builtin-rules Disable the built-in implicit rules. -R, --no-builtin-variables Disable the built-in variable settings. -s, --silent, --quiet Don't echo recipes. -S, --no-keep-going, --stop Turns off -k. -t, --touch Touch targets instead of remaking them. --trace Print tracing information. -v, --version Print the version number of make and exit. -w, --print-directory Print the current directory. --no-print-directory Turn off -w, even if it was turned on implicitly. -W FILE, --what-if=FILE, --new-file=FILE, --assume-new=FILE Consider FILE to be infinitely new. --warn-undefined-variables Warn when an undefined variable is referenced. virtual memory exhausted lseek() read() fwrite() %s: Entering an unknown directory %s: Leaving an unknown directory %s: Entering directory '%s' %s: Leaving directory '%s' %s[%u]: Entering an unknown directory %s[%u]: Leaving an unknown directory %s[%u]: Entering directory '%s' %s[%u]: Leaving directory '%s' fcntl() %s: %s tmpfile %s:%lu: *** %s: *** %s[%u]: *** . Stop. %s:%lu: %s: %s[%u]: %s%s: %s write error: %s write error ifdef ifndef ifeq ifneq else endif extraneous text after '%s' directive extraneous '%s' only one 'else' per conditional warning: NUL character seen; rest of line ignored export override private undefine define prerequisites cannot be defined in recipes mixed implicit and static pattern rules mixed implicit and normal rules .POSIX .SHELLFLAGS ARFLAGS CFLAGS fort77 -O 1 FFLAGS SCCSGETFLAGS .SECONDEXPANSION .ONESHELL target '%s' doesn't match the target pattern target file '%s' has both : and :: entries target '%s' given more than once in the same rule warning: overriding recipe for target '%s' warning: ignoring old recipe for target '%s' $(HOME) HOME .INCLUDE_DIRS virtual memory exhausted Skipping UTF-8 BOM in makefile '%s' Skipping UTF-8 BOM in makefile buffer empty variable name extraneous text after 'define' directive missing 'endef', unterminated 'define' endef extraneous text after 'endef' directive invalid syntax in conditional unexport vpath include -include sinclude %s: %s load -load %s: failed to load recipe commences before first target missing rule before recipe (did you mean TAB instead of 8 spaces?) missing separator%s Malformed target-specific variable definition missing target pattern multiple target patterns target pattern contains no '%%' .DEFAULT_GOAL missing 'endif' Reading makefile '%s' (no default goal) (search path) (don't care) (no ~ expansion) MAKEFILE_LIST Reading makefiles... $(MAKEFILES) GNUmakefile makefile Makefile /usr/include /usr/gnu/include /usr/local/include stat: lstat: readlink: *** %sNo rule to make target '%s'%s %sNo rule to make target '%s', needed by '%s'%s $(.LIBPATTERNS) .LIBPATTERNS element '%s' is not a pattern %s/%s %.2g Warning: File '%s' has modification time %s s in the future touch %s touch: open: touch: fstat: touch: read: touch: lseek: touch: write: Pruning file '%s'. Considering target file '%s'. Recently tried and failed to update file '%s'. File '%s' was considered already. Still updating file '%s'. Finished updating file '%s'. File '%s' does not exist. *** Warning: .LOW_RESOLUTION_TIME file '%s' has a high resolution time stamp Found an implicit rule for '%s'. No implicit rule found for '%s'. Using default recipe for '%s'. Circular %s <- %s dependency dropped. Finished prerequisites of target file '%s'. The prerequisites of '%s' are being made. Giving up on target file '%s'. Target '%s' not remade because of errors. Prerequisite '%s' is order-only for target '%s'. Prerequisite '%s' of target '%s' does not exist. Prerequisite '%s' is newer than target '%s'. Prerequisite '%s' is older than target '%s'. Target '%s' is double-colon and has no prerequisites. No recipe for '%s' and no prerequisites actually changed. Making '%s' due to always-make flag. No need to remake target '%s' ; using VPATH name '%s' Must remake target '%s'. Ignoring VPATH name '%s'. Recipe of '%s' is being run. Failed to remake target file '%s'. Successfully remade target file '%s'. Target file '%s' needs to be remade under -q. Using default commands for '%s'. Nothing to be done for '%s'. '%s' is up to date. /lib /usr/lib _(knN (%.o) # Implicit Rules # No implicit rules. # %u implicit rules, %u (%.1f%%) terminal. BUG: num_pattern_rules is wrong! %u != %u %s No strcache buffers %s strcache buffers: %lu (%lu) / strings = %lu / storage = %lu B / avg = %lu B %s current buf: size = %hu B / used = %hu B / count = %hu / avg = %hu B %s other used: total = %lu B / count = %lu / avg = %lu B %s other free: total = %lu B / max = %lu B / min = %lu B / avg = %hu B %s strcache performance: lookups = %lu / hit rate = %lu%% # hash-table stats: automatic default environment makefile environment under -e command line 'override' directive private (from '%s', line %lu) define %s endef %s %s= $(subst ,,%s) .RECIPEPREFIX .VARIABLES MAKELEVEL %s%s%s MAKE_VERSION MAKE_HOST SHELL MAKEFILES $(patsubst %/,%,$(dir $@)) $(patsubst %/,%,$(dir $%)) $(patsubst %/,%,$(dir $*)) $(patsubst %/,%,$(dir $<)) $(patsubst %/,%,$(dir $?)) $(patsubst %/,%,$(dir $^)) $(patsubst %/,%,$(dir $+)) $(notdir $@) $(notdir $%) $(notdir $*) $(notdir $<) $(notdir $?) $(notdir $^) $(notdir $+) %s=%u empty variable name # variable set hash-table stats: # Variables # Pattern-specific Variable Values # No pattern-specific variable values. %s : # %u pattern-specific variable values i686-pc-cygwin $(strip $(VPATH)) $(strip $(GPATH)) # VPATH Search Paths # No 'vpath' search paths. vpath %s %s%c # %u 'vpath' search paths. # No general ('VPATH' variable) search path. # General ('VPATH' variable) search path: can't allocate %lu bytes for hash table: memory exhausted Load=%ld/%ld=%.0f%%, Rehash=%d, Collisions=%ld/%ld=%.0f%% BPOSIXLY_CORRECT alnum alpha blank cntrl digit graph lower print punct space upper xdigit HOME next != NULL /netrel/src/make-4.0-2/glob/glob.c glob __assert_func __ctype_ptr__ __errno __getreent __main _dll_crt0@0 _exit _fcntl64 _fdopen64 _fopen64 _fstat64 _ftruncate64 _impure_ptr _lseek64 _lstat64 _open64 _stat64 _tmpfile64 abort alarm atexit atof atoi atol calloc chdir clock_gettime close closedir ctime cygwin_detach_dll cygwin_internal dlclose dlerror dll_dllcrt0 dlopen dlsym dup2 execvp exit fclose fflush fgets fileno fork fprintf fputc fputs fread free fwrite getcwd getenv getlogin getpid getpwnam getrlimit kill localtime malloc memcmp memcpy memmove memset mkstemp opendir perror pipe printf putc putenv puts qsort read readdir readlink realloc realpath remove setrlimit setvbuf sigaction sigaddset sigemptyset signal sigprocmask sprintf sscanf stpcpy strchr strcmp strcpy strdup strerror strlen strncmp strncpy strndup strpbrk strrchr strsignal strstr time tolower unlink vsnprintf wait waitpid write libintl_bindtextdomain libintl_gettext libintl_setlocale libintl_textdomain GetModuleHandleA GetProcAddress cygwin1.dll cygintl-8.dll KERNEL32.dll make.exe.dbg .eh_frame .gnu_debuglink Defined make macro "OMAKE " to "/usr/bin/make --no-print-directory" Defined make rule "libc" with dependencies "${LIBNAME}(${OBJSC})" and code [] Defined make rule "libcu" with dependencies "${LIBNAME}(${OBJSCU})" and code [] Defined make rule "libf" with dependencies "${OBJSF}" and code -${AR} ${AR_FLAGS} ${LIBNAME} ${OBJSF} module multiprocessing found 8 cores: using make_np = 5 Defined make macro "MAKE_NP" to "5" ================================================================================ TEST configureMkdir from config.programs(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/programs.py:111) TESTING: configureMkdir from config.programs(config/BuildSystem/config/programs.py:111) Make sure we can have mkdir automatically make intermediate directories Checking for program /usr/bin/mkdir...found sh: /usr/bin/mkdir -p .conftest/tmp Executing: /usr/bin/mkdir -p .conftest/tmp sh: Adding -p flag to /usr/bin/mkdir -p to automatically create directories Defined make macro "MKDIR" to "/usr/bin/mkdir -p" ================================================================================ TEST configurePrograms from config.programs(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/programs.py:133) TESTING: configurePrograms from config.programs(config/BuildSystem/config/programs.py:133) Check for the programs needed to build and run PETSc Checking for program /usr/bin/sh...found Defined make macro "SHELL" to "/usr/bin/sh" Checking for program /usr/bin/sed...found Defined make macro "SED" to "/usr/bin/sed" All intermediate test results are stored in /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2 All intermediate test results are stored in /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.programs sh: /usr/bin/sed -i s/sed/sd/g "/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.programs/sed1" Executing: /usr/bin/sed -i s/sed/sd/g "/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.programs/sed1" sh: Adding SEDINPLACE cmd: /usr/bin/sed -i Defined make macro "SEDINPLACE" to "/usr/bin/sed -i" Checking for program /usr/bin/mv...found Defined make macro "MV" to "/usr/bin/mv" Checking for program /usr/bin/cp...found Defined make macro "CP" to "/usr/bin/cp" Checking for program /usr/bin/grep...found Defined make macro "GREP" to "/usr/bin/grep" Checking for program /usr/bin/rm...found Defined make macro "RM" to "/usr/bin/rm -f" Checking for program /usr/bin/diff...found sh: "/usr/bin/diff" -w "/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.programs/diff1" "/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.programs/diff2" Executing: "/usr/bin/diff" -w "/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.programs/diff1" "/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.programs/diff2" sh: Defined make macro "DIFF" to "/usr/bin/diff -w" Checking for program /usr/ucb/ps...not found Checking for program /usr/usb/ps...not found Checking for program /home/fraphel/ps...not found Checking for program /usr/bin/gzip...found Defined make macro "GZIP" to "/usr/bin/gzip" Defined "HAVE_GZIP" to "1" Defined make macro "PYTHON" to "/usr/bin/python" ================================================================================ TEST configureGit from config.sourceControl(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/sourceControl.py:24) TESTING: configureGit from config.sourceControl(config/BuildSystem/config/sourceControl.py:24) Find the Git executable Checking for program /usr/bin/git...found Defined make macro "GIT" to "git" sh: git --version Executing: git --version sh: git version 2.1.1 ================================================================================ TEST configureMercurial from config.sourceControl(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/sourceControl.py:35) TESTING: configureMercurial from config.sourceControl(config/BuildSystem/config/sourceControl.py:35) Find the Mercurial executable Checking for program /usr/bin/hg...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 9.0/Common7/IDE/hg...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 9.0/VC/BIN/hg...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 9.0/Common7/Tools/hg...not found Checking for program /cygdrive/c/windows/Microsoft.NET/Framework/v3.5/hg...not found Checking for program /cygdrive/c/windows/Microsoft.NET/Framework/v2.0.50727/hg...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 9.0/VC/VCPackages/hg...not found Checking for program /cygdrive/c/Program Files/Microsoft SDKs/Windows/v6.0A/bin/hg...not found Checking for program /cygdrive/c/Program Files (x86)/NVIDIA Corporation/PhysX/Common/hg...not found Checking for program /cygdrive/c/windows/system32/hg...not found Checking for program /cygdrive/c/windows/hg...not found Checking for program /cygdrive/c/windows/System32/Wbem/hg...not found Checking for program /cygdrive/c/windows/System32/WindowsPowerShell/v1.0/hg...not found Checking for program /cygdrive/c/Program Files/Intel/WiFi/bin/hg...not found Checking for program /cygdrive/c/Program Files/Common Files/Intel/WirelessCommon/hg...not found Checking for program /cygdrive/c/Program Files/MATLAB/R2014b/runtime/win64/hg...not found Checking for program /cygdrive/c/Program Files/MATLAB/R2014b/bin/hg...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft SQL Server/90/Tools/binn/hg...not found Checking for program /cygdrive/c/Program Files (x86)/Lua/5.1/hg...not found Checking for program /cygdrive/c/Program Files (x86)/Lua/5.1/clibs/hg...not found Checking for program /cygdrive/c/cygwin/packages/petsc-3.4.5/bin/win32fe/hg...not found Checking for program /home/fraphel/hg...not found ================================================================================ TEST configureCVS from config.sourceControl(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/sourceControl.py:46) TESTING: configureCVS from config.sourceControl(config/BuildSystem/config/sourceControl.py:46) Find the CVS executable Checking for program /usr/bin/cvs...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 9.0/Common7/IDE/cvs...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 9.0/VC/BIN/cvs...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 9.0/Common7/Tools/cvs...not found Checking for program /cygdrive/c/windows/Microsoft.NET/Framework/v3.5/cvs...not found Checking for program /cygdrive/c/windows/Microsoft.NET/Framework/v2.0.50727/cvs...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 9.0/VC/VCPackages/cvs...not found Checking for program /cygdrive/c/Program Files/Microsoft SDKs/Windows/v6.0A/bin/cvs...not found Checking for program /cygdrive/c/Program Files (x86)/NVIDIA Corporation/PhysX/Common/cvs...not found Checking for program /cygdrive/c/windows/system32/cvs...not found Checking for program /cygdrive/c/windows/cvs...not found Checking for program /cygdrive/c/windows/System32/Wbem/cvs...not found Checking for program /cygdrive/c/windows/System32/WindowsPowerShell/v1.0/cvs...not found Checking for program /cygdrive/c/Program Files/Intel/WiFi/bin/cvs...not found Checking for program /cygdrive/c/Program Files/Common Files/Intel/WirelessCommon/cvs...not found Checking for program /cygdrive/c/Program Files/MATLAB/R2014b/runtime/win64/cvs...not found Checking for program /cygdrive/c/Program Files/MATLAB/R2014b/bin/cvs...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft SQL Server/90/Tools/binn/cvs...not found Checking for program /cygdrive/c/Program Files (x86)/Lua/5.1/cvs...not found Checking for program /cygdrive/c/Program Files (x86)/Lua/5.1/clibs/cvs...not found Checking for program /cygdrive/c/cygwin/packages/petsc-3.4.5/bin/win32fe/cvs...not found Checking for program /home/fraphel/cvs...not found ================================================================================ TEST configureSubversion from config.sourceControl(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/sourceControl.py:55) TESTING: configureSubversion from config.sourceControl(config/BuildSystem/config/sourceControl.py:55) Find the Subversion executable Checking for program /usr/bin/svn...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 9.0/Common7/IDE/svn...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 9.0/VC/BIN/svn...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 9.0/Common7/Tools/svn...not found Checking for program /cygdrive/c/windows/Microsoft.NET/Framework/v3.5/svn...not found Checking for program /cygdrive/c/windows/Microsoft.NET/Framework/v2.0.50727/svn...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 9.0/VC/VCPackages/svn...not found Checking for program /cygdrive/c/Program Files/Microsoft SDKs/Windows/v6.0A/bin/svn...not found Checking for program /cygdrive/c/Program Files (x86)/NVIDIA Corporation/PhysX/Common/svn...not found Checking for program /cygdrive/c/windows/system32/svn...not found Checking for program /cygdrive/c/windows/svn...not found Checking for program /cygdrive/c/windows/System32/Wbem/svn...not found Checking for program /cygdrive/c/windows/System32/WindowsPowerShell/v1.0/svn...not found Checking for program /cygdrive/c/Program Files/Intel/WiFi/bin/svn...not found Checking for program /cygdrive/c/Program Files/Common Files/Intel/WirelessCommon/svn...not found Checking for program /cygdrive/c/Program Files/MATLAB/R2014b/runtime/win64/svn...not found Checking for program /cygdrive/c/Program Files/MATLAB/R2014b/bin/svn...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft SQL Server/90/Tools/binn/svn...not found Checking for program /cygdrive/c/Program Files (x86)/Lua/5.1/svn...not found Checking for program /cygdrive/c/Program Files (x86)/Lua/5.1/clibs/svn...not found Checking for program /cygdrive/c/cygwin/packages/petsc-3.4.5/bin/win32fe/svn...not found Checking for program /home/fraphel/svn...not found ================================================================================ TEST configureDirectories from PETSc.utilities.petscdir(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/PETSc/utilities/petscdir.py:28) TESTING: configureDirectories from PETSc.utilities.petscdir(config/PETSc/utilities/petscdir.py:28) Checks PETSC_DIR and sets if not set Version Information: #define PETSC_VERSION_RELEASE 1 #define PETSC_VERSION_MAJOR 3 #define PETSC_VERSION_MINOR 4 #define PETSC_VERSION_SUBMINOR 5 #define PETSC_VERSION_PATCH 0 #define PETSC_VERSION_DATE "Jun, 29, 2014" #define PETSC_VERSION_GIT "7a62cce252f04f67a7a72b9b996c10b58183a464" #define PETSC_VERSION_DATE_GIT "2014-06-29 22:37:18 -0500" #define PETSC_VERSION_(MAJOR,MINOR,SUBMINOR) \ #define PETSC_VERSION_LT(MAJOR,MINOR,SUBMINOR) \ #define PETSC_VERSION_LE(MAJOR,MINOR,SUBMINOR) \ #define PETSC_VERSION_GT(MAJOR,MINOR,SUBMINOR) \ #define PETSC_VERSION_GE(MAJOR,MINOR,SUBMINOR) \ Defined make macro "DIR" to "/cygdrive/c/cygwin/packages/petsc-3.4.5" Defined "DIR" to ""/cygdrive/c/cygwin/packages/petsc-3.4.5"" ================================================================================ TEST configureExternalPackagesDir from PETSc.utilities.petscdir(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/PETSc/utilities/petscdir.py:77) TESTING: configureExternalPackagesDir from PETSc.utilities.petscdir(config/PETSc/utilities/petscdir.py:77) ================================================================================ TEST configureInstallationMethod from PETSc.utilities.petscdir(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/PETSc/utilities/petscdir.py:84) TESTING: configureInstallationMethod from PETSc.utilities.petscdir(config/PETSc/utilities/petscdir.py:84) This is a tarball installation ================================================================================ TEST configureETags from PETSc.utilities.Etags(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/PETSc/utilities/Etags.py:27) TESTING: configureETags from PETSc.utilities.Etags(config/PETSc/utilities/Etags.py:27) Determine if etags files exist and try to create otherwise Found etags file ================================================================================ TEST getDatafilespath from PETSc.utilities.dataFilesPath(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/PETSc/utilities/dataFilesPath.py:29) TESTING: getDatafilespath from PETSc.utilities.dataFilesPath(config/PETSc/utilities/dataFilesPath.py:29) Checks what DATAFILESPATH should be Defined make macro "DATAFILESPATH" to "None" ================================================================================ TEST printEnvVariables from config.setCompilers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/setCompilers.py:1504) TESTING: printEnvVariables from config.setCompilers(config/BuildSystem/config/setCompilers.py:1504) **** printenv **** TMP=/cygdrive/c/Users/fraphel/AppData/Local/Temp PSModulePath=C:\windows\system32\WindowsPowerShell\v1.0\Modules\ HOME=/home/fraphel LIB=C:\Program Files (x86)\Microsoft Visual Studio 9.0\VC\ATLMFC\LIB;C:\Program Files (x86)\Microsoft Visual Studio 9.0\VC\LIB;C:\Program Files\\Microsoft SDKs\Windows\v6.0A\lib; USERDOMAIN=ROCQ DEFLOGDIR=C:\ProgramData\McAfee\DesktopProtection COMPUTERNAME=PO-51052 VS90COMNTOOLS=C:\Program Files (x86)\Microsoft Visual Studio 9.0\Common7\Tools\ COMMONPROGRAMFILES=C:\Program Files (x86)\Common Files PROCESSOR_IDENTIFIER=Intel64 Family 6 Model 60 Stepping 3, GenuineIntel SYSTEMDRIVE=C: PROCESSOR_REVISION=3c03 !C:=C:\Program Files (x86)\Microsoft Visual Studio 9.0\VC PATH=/usr/bin:/cygdrive/c/Program Files (x86)/Microsoft Visual Studio 9.0/Common7/IDE:/cygdrive/c/Program Files (x86)/Microsoft Visual Studio 9.0/VC/BIN:/cygdrive/c/Program Files (x86)/Microsoft Visual Studio 9.0/Common7/Tools:/cygdrive/c/windows/Microsoft.NET/Framework/v3.5:/cygdrive/c/windows/Microsoft.NET/Framework/v2.0.50727:/cygdrive/c/Program Files (x86)/Microsoft Visual Studio 9.0/VC/VCPackages:/cygdrive/c/Program Files/Microsoft SDKs/Windows/v6.0A/bin:/cygdrive/c/Program Files (x86)/NVIDIA Corporation/PhysX/Common:/cygdrive/c/windows/system32:/cygdrive/c/windows:/cygdrive/c/windows/System32/Wbem:/cygdrive/c/windows/System32/WindowsPowerShell/v1.0:/cygdrive/c/Program Files/Intel/WiFi/bin:/cygdrive/c/Program Files/Common Files/Intel/WirelessCommon:/cygdrive/c/Program Files/MATLAB/R2014b/runtime/win64:/cygdrive/c/Program Files/MATLAB/R2014b/bin:/cygdrive/c/Program Files (x86)/Microsoft SQL Server/90/Tools/binn:/cygdrive/c/Program Files (x86)/Lua/5.1:/cygdrive/c/Program Files (x86)/Lua/5.1/clibs:/cygdrive/c/cygwin/packages/petsc-3.4.5/bin/win32fe HOMEDRIVE=Y: MpConfig_ProductAppDataPath=C:\ProgramData\Microsoft\Windows Defender TERM=xterm CommonProgramW6432=C:\Program Files\Common Files TEMP=/cygdrive/c/Users/fraphel/AppData/Local/Temp MpConfig_ProductUserAppDataPath=C:\Users\fraphel\AppData\Local\Microsoft\Windows Defender SHLVL=1 CommonProgramFiles(x86)=C:\Program Files (x86)\Common Files PROCESSOR_ARCHITECTURE=x86 !::=::\ VSINSTALLDIR=C:\Program Files (x86)\Microsoft Visual Studio 9.0 ALLUSERSPROFILE=C:\ProgramData DevEnvDir=C:\Program Files (x86)\Microsoft Visual Studio 9.0\Common7\IDE _=/usr/bin/python LOCALAPPDATA=C:\Users\fraphel\AppData\Local HOMEPATH=\ FrameworkDir=C:\windows\Microsoft.NET\Framework MpConfig_ReportingGUID=21EFD278-8CCE-4E35-8BF3-A8628A50BB16 LUA_PATH=;;C:\Program Files (x86)\Lua\5.1\lua\?.luac ProgramFiles(x86)=C:\Program Files (x86) ProgramW6432=C:\Program Files MpConfig_ProductCodeName=AntiSpyware USERNAME=fraphel LOGONSERVER=\\MORGANE MpConfig_ProductPath=C:\Program Files\Windows Defender COMSPEC=C:\windows\system32\cmd.exe windows_tracing_logfile=C:\BVTBin\Tests\installpackage\csilogfile.log SYSTEMROOT=C:\windows EXECIGNORE=*.dll VSEDEFLOGDIR=C:\ProgramData\McAfee\DesktopProtection PROMPT=$P$G USERDNSDOMAIN=ROCQ.INRIA.FR SESSIONNAME=Console PATHEXT=.COM;.EXE;.BAT;.CMD;.VBS;.VBE;.JS;.JSE;.WSF;.WSH;.MSC;.wlua;.lexe LIBPATH=C:\windows\Microsoft.NET\Framework\v3.5;C:\windows\Microsoft.NET\Framework\v2.0.50727;C:\Program Files (x86)\Microsoft Visual Studio 9.0\VC\ATLMFC\LIB;C:\Program Files (x86)\Microsoft Visual Studio 9.0\VC\LIB; INCLUDE=C:\Program Files (x86)\Microsoft Visual Studio 9.0\VC\ATLMFC\INCLUDE;C:\Program Files (x86)\Microsoft Visual Studio 9.0\VC\INCLUDE;C:\Program Files\\Microsoft SDKs\Windows\v6.0A\include; FP_NO_HOST_CHECK=NO WINDIR=C:\windows Framework35Version=v3.5 WindowsSdkDir=C:\Program Files\\Microsoft SDKs\Windows\v6.0A\ windows_tracing_flags=3 APPDATA=C:\Users\fraphel\AppData\Roaming PROGRAMFILES=C:\Program Files (x86) FrameworkVersion=v2.0.50727 OLDPWD=/cygdrive/c/Program Files (x86)/Microsoft Visual Studio 9.0/VC ProgramData=C:\ProgramData NUMBER_OF_PROCESSORS=8 PWD=/cygdrive/c/cygwin/packages/petsc-3.4.5 HOMESHARE=\\nas1-roc.rocqadm.inria.fr\fraphel PROCESSOR_LEVEL=6 PROCESSOR_ARCHITEW6432=AMD64 LUA_DEV=C:\Program Files (x86)\Lua\5.1 USERPROFILE=C:\Users\fraphel OS=Windows_NT PUBLIC=C:\Users\Public VCINSTALLDIR=C:\Program Files (x86)\Microsoft Visual Studio 9.0\VC ================================================================================ TEST resetEnvCompilers from config.setCompilers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/setCompilers.py:1511) TESTING: resetEnvCompilers from config.setCompilers(config/BuildSystem/config/setCompilers.py:1511) ================================================================================ TEST checkMPICompilerOverride from config.setCompilers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/setCompilers.py:1476) TESTING: checkMPICompilerOverride from config.setCompilers(config/BuildSystem/config/setCompilers.py:1476) Check if --with-mpi-dir is used along with CC CXX or FC compiler options. This usually prevents mpi compilers from being used - so issue a warning ================================================================================ TEST requireMpiLdPath from config.setCompilers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/setCompilers.py:1495) TESTING: requireMpiLdPath from config.setCompilers(config/BuildSystem/config/setCompilers.py:1495) OpenMPI wrappers require LD_LIBRARY_PATH set ================================================================================ TEST checkVendor from config.setCompilers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/setCompilers.py:399) TESTING: checkVendor from config.setCompilers(config/BuildSystem/config/setCompilers.py:399) Determine the compiler vendor Compiler vendor is "" ================================================================================ TEST checkInitialFlags from config.setCompilers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/setCompilers.py:409) TESTING: checkInitialFlags from config.setCompilers(config/BuildSystem/config/setCompilers.py:409) Initialize the compiler and linker flags Pushing language C Initialized CFLAGS to -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include Initialized CFLAGS to -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include Initialized LDFLAGS to Popping language C Pushing language CUDA Initialized CUDAFLAGS to Initialized CUDAFLAGS to Initialized LDFLAGS to Popping language CUDA Pushing language Cxx Initialized CXXFLAGS to -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include Initialized CXX_CXXFLAGS to Initialized LDFLAGS to Popping language Cxx Pushing language FC Initialized FFLAGS to Initialized FFLAGS to Initialized LDFLAGS to Popping language FC Initialized CPPFLAGS to Initialized CUDAPPFLAGS to Initialized CXXCPPFLAGS to Initialized CC_LINKER_FLAGS to [] Initialized CXX_LINKER_FLAGS to [] Initialized FC_LINKER_FLAGS to [] Initialized CUDAC_LINKER_FLAGS to [] Initialized sharedLibraryFlags to [] Initialized dynamicLibraryFlags to [] ================================================================================ TEST checkCCompiler from config.setCompilers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/setCompilers.py:525) TESTING: checkCCompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:525) Locate a functional C compiler Checking for program /usr/bin/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 9.0/Common7/IDE/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 9.0/VC/BIN/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 9.0/Common7/Tools/win32fe...not found Checking for program /cygdrive/c/windows/Microsoft.NET/Framework/v3.5/win32fe...not found Checking for program /cygdrive/c/windows/Microsoft.NET/Framework/v2.0.50727/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 9.0/VC/VCPackages/win32fe...not found Checking for program /cygdrive/c/Program Files/Microsoft SDKs/Windows/v6.0A/bin/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/NVIDIA Corporation/PhysX/Common/win32fe...not found Checking for program /cygdrive/c/windows/system32/win32fe...not found Checking for program /cygdrive/c/windows/win32fe...not found Checking for program /cygdrive/c/windows/System32/Wbem/win32fe...not found Checking for program /cygdrive/c/windows/System32/WindowsPowerShell/v1.0/win32fe...not found Checking for program /cygdrive/c/Program Files/Intel/WiFi/bin/win32fe...not found Checking for program /cygdrive/c/Program Files/Common Files/Intel/WirelessCommon/win32fe...not found Checking for program /cygdrive/c/Program Files/MATLAB/R2014b/runtime/win64/win32fe...not found Checking for program /cygdrive/c/Program Files/MATLAB/R2014b/bin/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft SQL Server/90/Tools/binn/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Lua/5.1/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Lua/5.1/clibs/win32fe...not found Checking for program /cygdrive/c/cygwin/packages/petsc-3.4.5/bin/win32fe/win32fe...found Defined make macro "CC" to "win32fe cl" Pushing language C All intermediate test results are stored in /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C Pushing language CUDA Popping language CUDA Pushing language Cxx Popping language Cxx Pushing language FC Popping language FC Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: Executing: /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe sh: /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe Executing: /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe sh: Popping language C ================================================================================ TEST checkCPreprocessor from config.setCompilers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/setCompilers.py:560) TESTING: checkCPreprocessor from config.setCompilers(config/BuildSystem/config/setCompilers.py:560) Locate a functional C preprocessor Checking for program /usr/bin/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 9.0/Common7/IDE/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 9.0/VC/BIN/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 9.0/Common7/Tools/win32fe...not found Checking for program /cygdrive/c/windows/Microsoft.NET/Framework/v3.5/win32fe...not found Checking for program /cygdrive/c/windows/Microsoft.NET/Framework/v2.0.50727/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 9.0/VC/VCPackages/win32fe...not found Checking for program /cygdrive/c/Program Files/Microsoft SDKs/Windows/v6.0A/bin/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/NVIDIA Corporation/PhysX/Common/win32fe...not found Checking for program /cygdrive/c/windows/system32/win32fe...not found Checking for program /cygdrive/c/windows/win32fe...not found Checking for program /cygdrive/c/windows/System32/Wbem/win32fe...not found Checking for program /cygdrive/c/windows/System32/WindowsPowerShell/v1.0/win32fe...not found Checking for program /cygdrive/c/Program Files/Intel/WiFi/bin/win32fe...not found Checking for program /cygdrive/c/Program Files/Common Files/Intel/WirelessCommon/win32fe...not found Checking for program /cygdrive/c/Program Files/MATLAB/R2014b/runtime/win64/win32fe...not found Checking for program /cygdrive/c/Program Files/MATLAB/R2014b/bin/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft SQL Server/90/Tools/binn/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Lua/5.1/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Lua/5.1/clibs/win32fe...not found Checking for program /cygdrive/c/cygwin/packages/petsc-3.4.5/bin/win32fe/win32fe...found Defined make macro "CPP" to "win32fe cl -E" Pushing language C sh: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.c Executing: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.c sh: conftest.c #line 1 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.setCompilers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.setcompilers\\confdefs.h" #line 7 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.setcompilers\\confdefs.h" #line 11 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.setcompilers\\confdefs.h" #line 15 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.setcompilers\\confdefs.h" #line 17 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.setcompilers\\confdefs.h" #line 2 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.setCompilers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.setcompilers\\conffix.h" #line 8 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.setcompilers\\conffix.h" #line 9 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.setcompilers\\conffix.h" #line 10 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.setcompilers\\conffix.h" #line 3 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.setCompilers\\conftest.c" #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\stdlib.h" #pragma once #line 19 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\stdlib.h" #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 22 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 23 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 38 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 42 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 65 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 67 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #pragma once #line 112 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 117 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 122 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 123 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 145 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 149 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" Popping language C ================================================================================ TEST checkCUDACompiler from config.setCompilers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/setCompilers.py:594) TESTING: checkCUDACompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:594) Locate a functional CUDA compiler Checking for program /usr/bin/nvcc...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 9.0/Common7/IDE/nvcc...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 9.0/VC/BIN/nvcc...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 9.0/Common7/Tools/nvcc...not found Checking for program /cygdrive/c/windows/Microsoft.NET/Framework/v3.5/nvcc...not found Checking for program /cygdrive/c/windows/Microsoft.NET/Framework/v2.0.50727/nvcc...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 9.0/VC/VCPackages/nvcc...not found Checking for program /cygdrive/c/Program Files/Microsoft SDKs/Windows/v6.0A/bin/nvcc...not found Checking for program /cygdrive/c/Program Files (x86)/NVIDIA Corporation/PhysX/Common/nvcc...not found Checking for program /cygdrive/c/windows/system32/nvcc...not found Checking for program /cygdrive/c/windows/nvcc...not found Checking for program /cygdrive/c/windows/System32/Wbem/nvcc...not found Checking for program /cygdrive/c/windows/System32/WindowsPowerShell/v1.0/nvcc...not found Checking for program /cygdrive/c/Program Files/Intel/WiFi/bin/nvcc...not found Checking for program /cygdrive/c/Program Files/Common Files/Intel/WirelessCommon/nvcc...not found Checking for program /cygdrive/c/Program Files/MATLAB/R2014b/runtime/win64/nvcc...not found Checking for program /cygdrive/c/Program Files/MATLAB/R2014b/bin/nvcc...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft SQL Server/90/Tools/binn/nvcc...not found Checking for program /cygdrive/c/Program Files (x86)/Lua/5.1/nvcc...not found Checking for program /cygdrive/c/Program Files (x86)/Lua/5.1/clibs/nvcc...not found Checking for program /cygdrive/c/cygwin/packages/petsc-3.4.5/bin/win32fe/nvcc...not found Checking for program /home/fraphel/nvcc...not found Checking for program /cygdrive/c/cygwin/packages/petsc-3.4.5/bin/win32fe/nvcc...not found Checking for program /usr/bin/nvcc...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 9.0/Common7/IDE/nvcc...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 9.0/VC/BIN/nvcc...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 9.0/Common7/Tools/nvcc...not found Checking for program /cygdrive/c/windows/Microsoft.NET/Framework/v3.5/nvcc...not found Checking for program /cygdrive/c/windows/Microsoft.NET/Framework/v2.0.50727/nvcc...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 9.0/VC/VCPackages/nvcc...not found Checking for program /cygdrive/c/Program Files/Microsoft SDKs/Windows/v6.0A/bin/nvcc...not found Checking for program /cygdrive/c/Program Files (x86)/NVIDIA Corporation/PhysX/Common/nvcc...not found Checking for program /cygdrive/c/windows/system32/nvcc...not found Checking for program /cygdrive/c/windows/nvcc...not found Checking for program /cygdrive/c/windows/System32/Wbem/nvcc...not found Checking for program /cygdrive/c/windows/System32/WindowsPowerShell/v1.0/nvcc...not found Checking for program /cygdrive/c/Program Files/Intel/WiFi/bin/nvcc...not found Checking for program /cygdrive/c/Program Files/Common Files/Intel/WirelessCommon/nvcc...not found Checking for program /cygdrive/c/Program Files/MATLAB/R2014b/runtime/win64/nvcc...not found Checking for program /cygdrive/c/Program Files/MATLAB/R2014b/bin/nvcc...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft SQL Server/90/Tools/binn/nvcc...not found Checking for program /cygdrive/c/Program Files (x86)/Lua/5.1/nvcc...not found Checking for program /cygdrive/c/Program Files (x86)/Lua/5.1/clibs/nvcc...not found Checking for program /cygdrive/c/cygwin/packages/petsc-3.4.5/bin/win32fe/nvcc...not found Checking for program /home/fraphel/nvcc...not found Checking for program /cygdrive/c/cygwin/packages/petsc-3.4.5/bin/win32fe/nvcc...not found ================================================================================ TEST checkCUDAPreprocessor from config.setCompilers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/setCompilers.py:632) TESTING: checkCUDAPreprocessor from config.setCompilers(config/BuildSystem/config/setCompilers.py:632) Locate a functional CUDA preprocessor ================================================================================ TEST checkCxxCompiler from config.setCompilers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/setCompilers.py:735) TESTING: checkCxxCompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:735) Locate a functional Cxx compiler Checking for program /usr/bin/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 9.0/Common7/IDE/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 9.0/VC/BIN/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 9.0/Common7/Tools/win32fe...not found Checking for program /cygdrive/c/windows/Microsoft.NET/Framework/v3.5/win32fe...not found Checking for program /cygdrive/c/windows/Microsoft.NET/Framework/v2.0.50727/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 9.0/VC/VCPackages/win32fe...not found Checking for program /cygdrive/c/Program Files/Microsoft SDKs/Windows/v6.0A/bin/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/NVIDIA Corporation/PhysX/Common/win32fe...not found Checking for program /cygdrive/c/windows/system32/win32fe...not found Checking for program /cygdrive/c/windows/win32fe...not found Checking for program /cygdrive/c/windows/System32/Wbem/win32fe...not found Checking for program /cygdrive/c/windows/System32/WindowsPowerShell/v1.0/win32fe...not found Checking for program /cygdrive/c/Program Files/Intel/WiFi/bin/win32fe...not found Checking for program /cygdrive/c/Program Files/Common Files/Intel/WirelessCommon/win32fe...not found Checking for program /cygdrive/c/Program Files/MATLAB/R2014b/runtime/win64/win32fe...not found Checking for program /cygdrive/c/Program Files/MATLAB/R2014b/bin/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft SQL Server/90/Tools/binn/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Lua/5.1/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Lua/5.1/clibs/win32fe...not found Checking for program /cygdrive/c/cygwin/packages/petsc-3.4.5/bin/win32fe/win32fe...found Defined make macro "CXX" to "win32fe cl" Pushing language Cxx sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.cc Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.cc sh: conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.cc Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.cc sh: conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C Pushing language CUDA Popping language CUDA Pushing language Cxx Popping language Cxx Pushing language FC Popping language FC Pushing language CXX Popping language CXX sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.cc Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.cc sh: conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language CXX Popping language CXX sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: Executing: /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe sh: /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe Executing: /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe sh: Popping language Cxx ================================================================================ TEST checkCxxPreprocessor from config.setCompilers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/setCompilers.py:773) TESTING: checkCxxPreprocessor from config.setCompilers(config/BuildSystem/config/setCompilers.py:773) Locate a functional Cxx preprocessor Checking for program /usr/bin/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 9.0/Common7/IDE/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 9.0/VC/BIN/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 9.0/Common7/Tools/win32fe...not found Checking for program /cygdrive/c/windows/Microsoft.NET/Framework/v3.5/win32fe...not found Checking for program /cygdrive/c/windows/Microsoft.NET/Framework/v2.0.50727/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 9.0/VC/VCPackages/win32fe...not found Checking for program /cygdrive/c/Program Files/Microsoft SDKs/Windows/v6.0A/bin/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/NVIDIA Corporation/PhysX/Common/win32fe...not found Checking for program /cygdrive/c/windows/system32/win32fe...not found Checking for program /cygdrive/c/windows/win32fe...not found Checking for program /cygdrive/c/windows/System32/Wbem/win32fe...not found Checking for program /cygdrive/c/windows/System32/WindowsPowerShell/v1.0/win32fe...not found Checking for program /cygdrive/c/Program Files/Intel/WiFi/bin/win32fe...not found Checking for program /cygdrive/c/Program Files/Common Files/Intel/WirelessCommon/win32fe...not found Checking for program /cygdrive/c/Program Files/MATLAB/R2014b/runtime/win64/win32fe...not found Checking for program /cygdrive/c/Program Files/MATLAB/R2014b/bin/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft SQL Server/90/Tools/binn/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Lua/5.1/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Lua/5.1/clibs/win32fe...not found Checking for program /cygdrive/c/cygwin/packages/petsc-3.4.5/bin/win32fe/win32fe...found Defined make macro "CXXCPP" to "win32fe cl -E" Pushing language Cxx sh: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.cc Executing: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.cc sh: conftest.cc #line 1 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.setCompilers\\conftest.cc" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.setcompilers\\confdefs.h" #line 7 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.setcompilers\\confdefs.h" #line 11 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.setcompilers\\confdefs.h" #line 15 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.setcompilers\\confdefs.h" #line 17 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.setcompilers\\confdefs.h" #line 2 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.setCompilers\\conftest.cc" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.setcompilers\\conffix.h" extern "C" { } #line 9 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.setcompilers\\conffix.h" #line 10 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.setcompilers\\conffix.h" #line 3 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.setCompilers\\conftest.cc" #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\cstdlib" #pragma once #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\yvals.h" #pragma once #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 22 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 23 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 38 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 42 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 65 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 67 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #pragma once #line 112 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 117 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 122 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 123 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 145 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 149 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" Popping language Cxx ================================================================================ TEST checkFortranCompiler from config.setCompilers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/setCompilers.py:882) TESTING: checkFortranCompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:882) Locate a functional Fortran compiler ================================================================================ TEST checkPIC from config.setCompilers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/setCompilers.py:964) TESTING: checkPIC from config.setCompilers(config/BuildSystem/config/setCompilers.py:964) Determine the PIC option for each compiler - There needs to be a test that checks that the functionality is actually working Pushing language C sh: win32fe cl --help Executing: win32fe cl --help sh: Win32 Development Tool Front End, version 1.10.1 Wed Oct 19 20:45:06 CDT 2011 Usage: win32fe -- - must be the first argument to win32fe : {cl,icl,df,f90,ifl,bcc32,lib,tlib} cl: Microsoft 32-bit C/C++ Optimizing Compiler icl: Intel C/C++ Optimizing Compiler df: Compaq Visual Fortran Optimizing Compiler f90: Compaq Visual Fortran90 Optimizing Compiler ifl: Intel Fortran Optimizing Compiler ifort: Intel Fortran Optimizing Compiler nvcc: NVIDIA CUDA Compiler Driver bcc32: Borland C++ for Win32 lib: Microsoft Library Manager tlib: Borland Library Manager : --help: Output this help message and help for --autodetect: Attempt automatic detection of installation --path : specifies an addition to the PATH that is required (ex. the location of a required .dll) --use : specifies the variant of to use --verbose: Echo to stdout the translated commandline and other diagnostic information --version: Output version info for win32fe and --wait_for_debugger: Inserts an infinite wait after creation of and outputs PID so one can manually attach a debugger to the current process. In the debugger, one must set: tool::waitfordebugger = 0 to continue the execution normally. --win-l: For compilers, define -lfoo to link foo.lib instead of libfoo.lib --woff: Suppress win32fe specific warning messages ================================================================================= For compilers: win32fe will map the following to their native options: -c: Compile Only, generates an object file with .o extension This will invoke the compiler once for each file listed. -l: Link the file lib.lib or if using --win-l also, .lib -o : Output= context dependent -D: Define -I: Add to the include path -L: Add to the link path -g: Generate debug symbols in objects when specified for compilation, and in executables when specified for linking (some compilers specification at both times for full debugging support). -O: Enable compiletime and/or linktime optimizations. Ex: win32fe cl -g -c foo.c --verbose -Iinclude Note: win32fe will automatically find the system library paths and system include paths, relieving the user of the need to invoke a particular shell. ========================================================================= cl specific help: win32fe uses -nologo by default for nonverbose output. Use the flag: -logo to disable this feature. -g is identical to -Z7. -O is identical to -O2. ========================================================================= Microsoft (R) 32-bit C/C++ Optimizing Compiler Version 15.00.21022.08 for 80x86 Copyright (C) Microsoft Corporation. All rights reserved. C/C++ COMPILER OPTIONS -OPTIMIZATION- /O1 minimize space /O2 maximize speed /Ob inline expansion (default n=0) /Od disable optimizations (default) /Og enable global optimization /Oi[-] enable intrinsic functions /Os favor code space /Ot favor code speed /Ox maximum optimizations /Oy[-] enable frame pointer omission -CODE GENERATION- /GF enable read-only string pooling /Gm[-] enable minimal rebuild /Gy[-] separate functions for linker /GS[-] enable security checks /GR[-] enable C++ RTTI /GX[-] enable C++ EH (same as /EHsc) /EHs enable C++ EH (no SEH exceptions) /EHa enable C++ EH (w/ SEH exceptions) /EHc extern "C" defaults to nothrow /fp: choose floating-point model: except[-] - consider floating-point exceptions when generating code fast - "fast" floating-point model; results are less predictable precise - "precise" floating-point model; results are predictable strict - "strict" floating-point model (implies /fp:except) /Qfast_transcendentals generate inline FP intrinsics even with /fp:except /GL[-] enable link-time code generation /GA optimize for Windows Application /Ge force stack checking for all funcs /Gs[num] control stack checking calls /Gh enable _penter function call /GH enable _pexit function call /GT generate fiber-safe TLS accesses /RTC1 Enable fast checks (/RTCsu) /RTCc Convert to smaller type checks /RTCs Stack Frame runtime checking /RTCu Uninitialized local usage checks /clr[:option] compile for common language runtime, where option is: pure - produce IL-only output file (no native executable code) safe - produce IL-only verifiable output file oldSyntax - accept the Managed Extensions syntax from Visual C++ 2002/2003 initialAppDomain - enable initial AppDomain behavior of Visual C++ 2002 noAssembly - do not produce an assembly /Gd __cdecl calling convention /Gr __fastcall calling convention /Gz __stdcall calling convention /GZ Enable stack checks (/RTCs) /QIfist[-] use FIST instead of ftol() /hotpatch ensure function padding for hotpatchable images /arch: minimum CPU architecture requirements, one of: SSE - enable use of instructions available with SSE enabled CPUs SSE2 - enable use of instructions available with SSE2 enabled CPUs /Qimprecise_fwaits generate FWAITs only on "try" boundaries, not inside "try" -OUTPUT FILES- /Fa[file] name assembly listing file /FA[scu] configure assembly listing /Fd[file] name .PDB file /Fe name executable file /Fm[file] name map file /Fo name object file /Fp name precompiled header file /Fr[file] name source browser file /FR[file] name extended .SBR file /doc[file] process XML documentation comments and optionally name the .xdc file -PREPROCESSOR- /AI add to assembly search path /FU forced using assembly/module /C don't strip comments /D{=|#} define macro /E preprocess to stdout /EP preprocess to stdout, no #line /P preprocess to file /Fx merge injected code to file /FI name forced include file /U remove predefined macro /u remove all predefined macros /I add to include search path /X ignore "standard places" -LANGUAGE- /Zi enable debugging information /Z7 enable old-style debug info /Zp[n] pack structs on n-byte boundary /Za disable extensions /Ze enable extensions (default) /Zl omit default library name in .OBJ /Zg generate function prototypes /Zs syntax check only /vd{0|1|2} disable/enable vtordisp /vm type of pointers to members /Zc:arg1[,arg2] C++ language conformance, where arguments can be: forScope[-] - enforce Standard C++ for scoping rules wchar_t[-] - wchar_t is the native type, not a typedef /ZI enable Edit and Continue debug info /openmp enable OpenMP 2.0 language extensions -MISCELLANEOUS- @ options response file /?, /help print this help message /bigobj generate extended object format /c compile only, no link /errorReport:option Report internal compiler errors to Microsoft none - do not send report prompt - prompt to immediately send report queue - at next admin logon, prompt to send report (default) send - send report automatically /FC use full pathnames in diagnostics /H max external name length /J default char type is unsigned /MP[n] use up to 'n' processes for compilation /nologo suppress copyright message /showIncludes show include file names /Tc compile file as .c /Tp compile file as .cpp /TC compile all files as .c /TP compile all files as .cpp /V set version string /w disable all warnings /wd disable warning n /we treat warning n as an error /wo issue warning n once /w set warning level 1-4 for n /W set warning level (default n=1) /Wall enable all warnings /WL enable one line diagnostics /WX treat warnings as errors /Yc[file] create .PCH file /Yd put debug info in every .OBJ /Yl[sym] inject .PCH ref for debug lib /Yu[file] use .PCH file /Y- disable all PCH options /Zm max memory alloc (% of default) /Wp64 enable 64 bit porting warnings -LINKING- /LD Create .DLL /LDd Create .DLL debug library /LN Create a .netmodule /F set stack size /link [linker options and libraries] /MD link with MSVCRT.LIB /MT link with LIBCMT.LIB /MDd link with MSVCRTD.LIB debug lib /MTd link with LIBCMTD.LIB debug lib Trying C compiler flag -PIC sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe -PIC -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe -PIC -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: cl : Command line warning D9002 : ignoring unknown option '-PIC' Rejecting C linker flag -PIC due to cl : Command line warning D9002 : ignoring unknown option '-PIC' Rejected C compiler flag -PIC because linker cannot handle it Trying C compiler flag -fPIC sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe -fPIC -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe -fPIC -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: cl : Command line warning D9002 : ignoring unknown option '-fPIC' Rejecting C linker flag -fPIC due to cl : Command line warning D9002 : ignoring unknown option '-fPIC' Rejected C compiler flag -fPIC because linker cannot handle it Trying C compiler flag -KPIC sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe -KPIC -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe -KPIC -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: cl : Command line warning D9002 : ignoring unknown option '-KPIC' Rejecting C linker flag -KPIC due to cl : Command line warning D9002 : ignoring unknown option '-KPIC' Rejected C compiler flag -KPIC because linker cannot handle it Trying C compiler flag -qpic sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe -qpic -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe -qpic -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: cl : Command line warning D9002 : ignoring unknown option '-qpic' Rejecting C linker flag -qpic due to cl : Command line warning D9002 : ignoring unknown option '-qpic' Rejected C compiler flag -qpic because linker cannot handle it Popping language C Pushing language Cxx sh: win32fe cl --help Executing: win32fe cl --help sh: Win32 Development Tool Front End, version 1.10.1 Wed Oct 19 20:45:06 CDT 2011 Usage: win32fe -- - must be the first argument to win32fe : {cl,icl,df,f90,ifl,bcc32,lib,tlib} cl: Microsoft 32-bit C/C++ Optimizing Compiler icl: Intel C/C++ Optimizing Compiler df: Compaq Visual Fortran Optimizing Compiler f90: Compaq Visual Fortran90 Optimizing Compiler ifl: Intel Fortran Optimizing Compiler ifort: Intel Fortran Optimizing Compiler nvcc: NVIDIA CUDA Compiler Driver bcc32: Borland C++ for Win32 lib: Microsoft Library Manager tlib: Borland Library Manager : --help: Output this help message and help for --autodetect: Attempt automatic detection of installation --path : specifies an addition to the PATH that is required (ex. the location of a required .dll) --use : specifies the variant of to use --verbose: Echo to stdout the translated commandline and other diagnostic information --version: Output version info for win32fe and --wait_for_debugger: Inserts an infinite wait after creation of and outputs PID so one can manually attach a debugger to the current process. In the debugger, one must set: tool::waitfordebugger = 0 to continue the execution normally. --win-l: For compilers, define -lfoo to link foo.lib instead of libfoo.lib --woff: Suppress win32fe specific warning messages ================================================================================= For compilers: win32fe will map the following to their native options: -c: Compile Only, generates an object file with .o extension This will invoke the compiler once for each file listed. -l: Link the file lib.lib or if using --win-l also, .lib -o : Output= context dependent -D: Define -I: Add to the include path -L: Add to the link path -g: Generate debug symbols in objects when specified for compilation, and in executables when specified for linking (some compilers specification at both times for full debugging support). -O: Enable compiletime and/or linktime optimizations. Ex: win32fe cl -g -c foo.c --verbose -Iinclude Note: win32fe will automatically find the system library paths and system include paths, relieving the user of the need to invoke a particular shell. ========================================================================= cl specific help: win32fe uses -nologo by default for nonverbose output. Use the flag: -logo to disable this feature. -g is identical to -Z7. -O is identical to -O2. ========================================================================= Microsoft (R) 32-bit C/C++ Optimizing Compiler Version 15.00.21022.08 for 80x86 Copyright (C) Microsoft Corporation. All rights reserved. C/C++ COMPILER OPTIONS -OPTIMIZATION- /O1 minimize space /O2 maximize speed /Ob inline expansion (default n=0) /Od disable optimizations (default) /Og enable global optimization /Oi[-] enable intrinsic functions /Os favor code space /Ot favor code speed /Ox maximum optimizations /Oy[-] enable frame pointer omission -CODE GENERATION- /GF enable read-only string pooling /Gm[-] enable minimal rebuild /Gy[-] separate functions for linker /GS[-] enable security checks /GR[-] enable C++ RTTI /GX[-] enable C++ EH (same as /EHsc) /EHs enable C++ EH (no SEH exceptions) /EHa enable C++ EH (w/ SEH exceptions) /EHc extern "C" defaults to nothrow /fp: choose floating-point model: except[-] - consider floating-point exceptions when generating code fast - "fast" floating-point model; results are less predictable precise - "precise" floating-point model; results are predictable strict - "strict" floating-point model (implies /fp:except) /Qfast_transcendentals generate inline FP intrinsics even with /fp:except /GL[-] enable link-time code generation /GA optimize for Windows Application /Ge force stack checking for all funcs /Gs[num] control stack checking calls /Gh enable _penter function call /GH enable _pexit function call /GT generate fiber-safe TLS accesses /RTC1 Enable fast checks (/RTCsu) /RTCc Convert to smaller type checks /RTCs Stack Frame runtime checking /RTCu Uninitialized local usage checks /clr[:option] compile for common language runtime, where option is: pure - produce IL-only output file (no native executable code) safe - produce IL-only verifiable output file oldSyntax - accept the Managed Extensions syntax from Visual C++ 2002/2003 initialAppDomain - enable initial AppDomain behavior of Visual C++ 2002 noAssembly - do not produce an assembly /Gd __cdecl calling convention /Gr __fastcall calling convention /Gz __stdcall calling convention /GZ Enable stack checks (/RTCs) /QIfist[-] use FIST instead of ftol() /hotpatch ensure function padding for hotpatchable images /arch: minimum CPU architecture requirements, one of: SSE - enable use of instructions available with SSE enabled CPUs SSE2 - enable use of instructions available with SSE2 enabled CPUs /Qimprecise_fwaits generate FWAITs only on "try" boundaries, not inside "try" -OUTPUT FILES- /Fa[file] name assembly listing file /FA[scu] configure assembly listing /Fd[file] name .PDB file /Fe name executable file /Fm[file] name map file /Fo name object file /Fp name precompiled header file /Fr[file] name source browser file /FR[file] name extended .SBR file /doc[file] process XML documentation comments and optionally name the .xdc file -PREPROCESSOR- /AI add to assembly search path /FU forced using assembly/module /C don't strip comments /D{=|#} define macro /E preprocess to stdout /EP preprocess to stdout, no #line /P preprocess to file /Fx merge injected code to file /FI name forced include file /U remove predefined macro /u remove all predefined macros /I add to include search path /X ignore "standard places" -LANGUAGE- /Zi enable debugging information /Z7 enable old-style debug info /Zp[n] pack structs on n-byte boundary /Za disable extensions /Ze enable extensions (default) /Zl omit default library name in .OBJ /Zg generate function prototypes /Zs syntax check only /vd{0|1|2} disable/enable vtordisp /vm type of pointers to members /Zc:arg1[,arg2] C++ language conformance, where arguments can be: forScope[-] - enforce Standard C++ for scoping rules wchar_t[-] - wchar_t is the native type, not a typedef /ZI enable Edit and Continue debug info /openmp enable OpenMP 2.0 language extensions -MISCELLANEOUS- @ options response file /?, /help print this help message /bigobj generate extended object format /c compile only, no link /errorReport:option Report internal compiler errors to Microsoft none - do not send report prompt - prompt to immediately send report queue - at next admin logon, prompt to send report (default) send - send report automatically /FC use full pathnames in diagnostics /H max external name length /J default char type is unsigned /MP[n] use up to 'n' processes for compilation /nologo suppress copyright message /showIncludes show include file names /Tc compile file as .c /Tp compile file as .cpp /TC compile all files as .c /TP compile all files as .cpp /V set version string /w disable all warnings /wd disable warning n /we treat warning n as an error /wo issue warning n once /w set warning level 1-4 for n /W set warning level (default n=1) /Wall enable all warnings /WL enable one line diagnostics /WX treat warnings as errors /Yc[file] create .PCH file /Yd put debug info in every .OBJ /Yl[sym] inject .PCH ref for debug lib /Yu[file] use .PCH file /Y- disable all PCH options /Zm max memory alloc (% of default) /Wp64 enable 64 bit porting warnings -LINKING- /LD Create .DLL /LDd Create .DLL debug library /LN Create a .netmodule /F set stack size /link [linker options and libraries] /MD link with MSVCRT.LIB /MT link with LIBCMT.LIB /MDd link with MSVCRTD.LIB debug lib /MTd link with LIBCMTD.LIB debug lib Trying Cxx compiler flag -PIC sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.cc Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.cc sh: conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language CXX Popping language CXX sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe -PIC -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe -PIC -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: cl : Command line warning D9002 : ignoring unknown option '-PIC' Rejecting Cxx linker flag -PIC due to cl : Command line warning D9002 : ignoring unknown option '-PIC' Rejected Cxx compiler flag -PIC because linker cannot handle it Trying Cxx compiler flag -fPIC sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.cc Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.cc sh: conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language CXX Popping language CXX sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe -fPIC -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe -fPIC -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: cl : Command line warning D9002 : ignoring unknown option '-fPIC' Rejecting Cxx linker flag -fPIC due to cl : Command line warning D9002 : ignoring unknown option '-fPIC' Rejected Cxx compiler flag -fPIC because linker cannot handle it Trying Cxx compiler flag -KPIC sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.cc Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.cc sh: conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language CXX Popping language CXX sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe -KPIC -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe -KPIC -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: cl : Command line warning D9002 : ignoring unknown option '-KPIC' Rejecting Cxx linker flag -KPIC due to cl : Command line warning D9002 : ignoring unknown option '-KPIC' Rejected Cxx compiler flag -KPIC because linker cannot handle it Trying Cxx compiler flag -qpic sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.cc Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.cc sh: conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language CXX Popping language CXX sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe -qpic -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe -qpic -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: cl : Command line warning D9002 : ignoring unknown option '-qpic' Rejecting Cxx linker flag -qpic due to cl : Command line warning D9002 : ignoring unknown option '-qpic' Rejected Cxx compiler flag -qpic because linker cannot handle it Popping language Cxx ================================================================================ TEST checkLargeFileIO from config.setCompilers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/setCompilers.py:998) TESTING: checkLargeFileIO from config.setCompilers(config/BuildSystem/config/setCompilers.py:998) ================================================================================ TEST checkArchiver from config.setCompilers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/setCompilers.py:1097) TESTING: checkArchiver from config.setCompilers(config/BuildSystem/config/setCompilers.py:1097) Check that the archiver exists and can make a library usable by the compiler Pushing language C sh: ar -V Executing: ar -V sh: GNU ar (GNU Binutils) 2.25 Copyright (C) 2014 Free Software Foundation, Inc. This program is free software; you may redistribute it under the terms of the GNU General Public License version 3 or (at your option) any later version. This program has absolutely no warranty. sh: ar -V Executing: ar -V sh: GNU ar (GNU Binutils) 2.25 Copyright (C) 2014 Free Software Foundation, Inc. This program is free software; you may redistribute it under the terms of the GNU General Public License version 3 or (at your option) any later version. This program has absolutely no warranty. Defined make macro "FAST_AR_FLAGS" to "Scq" sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int foo(int a) { return a+1; } Checking for program /usr/bin/ar...found Defined make macro "AR" to "/usr/bin/ar" Checking for program /usr/bin/ranlib...found Defined make macro "RANLIB" to "/usr/bin/ranlib -c" sh: /usr/bin/ar cr /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/libconf1.a /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conf1.o Executing: /usr/bin/ar cr /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/libconf1.a /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conf1.o sh: sh: /usr/bin/ranlib -c /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/libconf1.a Executing: /usr/bin/ranlib -c /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/libconf1.a sh: Possible ERROR while running ranlib: error message = {/usr/bin/ranlib: invalid option -- c } Ranlib is not functional with your archiver. Try --with-ranlib=true if ranlib is unnecessary. sh: ar -V Executing: ar -V sh: GNU ar (GNU Binutils) 2.25 Copyright (C) 2014 Free Software Foundation, Inc. This program is free software; you may redistribute it under the terms of the GNU General Public License version 3 or (at your option) any later version. This program has absolutely no warranty. sh: ar -V Executing: ar -V sh: GNU ar (GNU Binutils) 2.25 Copyright (C) 2014 Free Software Foundation, Inc. This program is free software; you may redistribute it under the terms of the GNU General Public License version 3 or (at your option) any later version. This program has absolutely no warranty. Defined make macro "FAST_AR_FLAGS" to "Scq" sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int foo(int a) { return a+1; } Checking for program /usr/bin/ar...found Defined make macro "AR" to "/usr/bin/ar" Checking for program /usr/bin/ranlib...found Defined make macro "RANLIB" to "/usr/bin/ranlib" sh: /usr/bin/ar cr /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/libconf1.a /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conf1.o Executing: /usr/bin/ar cr /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/libconf1.a /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conf1.o sh: sh: /usr/bin/ranlib /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/libconf1.a Executing: /usr/bin/ranlib /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/libconf1.a sh: sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" extern int foo(int); int main() { int b = foo(1); if (b); ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -L/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -lconf1 /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -L/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -lconf1 /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : fatal error LNK1181: cannot open input file 'libconf1.lib' Possible ERROR while running linker: output: LINK : fatal error LNK1181: cannot open input file 'libconf1.lib' ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -L/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -lconf1 /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" extern int foo(int); int main() { int b = foo(1); if (b); ; return 0; } sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" extern int foo(int); int main() { int b = foo(1); if (b); ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -L/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -lconf1 /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -L/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -lconf1 /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: Defined make macro "AR_FLAGS" to "cr" Defined make macro "AR_LIB_SUFFIX" to "lib" Popping language C ================================================================================ TEST checkSharedLinker from config.setCompilers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/setCompilers.py:1212) TESTING: checkSharedLinker from config.setCompilers(config/BuildSystem/config/setCompilers.py:1212) Check that the linker can produce shared libraries sh: uname -s Executing: uname -s sh: CYGWIN_NT-6.1-WOW64 Checking shared linker win32fe cl using flags ['-shared'] Checking for program /usr/bin/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 9.0/Common7/IDE/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 9.0/VC/BIN/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 9.0/Common7/Tools/win32fe...not found Checking for program /cygdrive/c/windows/Microsoft.NET/Framework/v3.5/win32fe...not found Checking for program /cygdrive/c/windows/Microsoft.NET/Framework/v2.0.50727/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 9.0/VC/VCPackages/win32fe...not found Checking for program /cygdrive/c/Program Files/Microsoft SDKs/Windows/v6.0A/bin/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/NVIDIA Corporation/PhysX/Common/win32fe...not found Checking for program /cygdrive/c/windows/system32/win32fe...not found Checking for program /cygdrive/c/windows/win32fe...not found Checking for program /cygdrive/c/windows/System32/Wbem/win32fe...not found Checking for program /cygdrive/c/windows/System32/WindowsPowerShell/v1.0/win32fe...not found Checking for program /cygdrive/c/Program Files/Intel/WiFi/bin/win32fe...not found Checking for program /cygdrive/c/Program Files/Common Files/Intel/WirelessCommon/win32fe...not found Checking for program /cygdrive/c/Program Files/MATLAB/R2014b/runtime/win64/win32fe...not found Checking for program /cygdrive/c/Program Files/MATLAB/R2014b/bin/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft SQL Server/90/Tools/binn/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Lua/5.1/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Lua/5.1/clibs/win32fe...not found Checking for program /cygdrive/c/cygwin/packages/petsc-3.4.5/bin/win32fe/win32fe...found Defined make macro "LD_SHARED" to "win32fe cl" sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe -shared -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe -shared -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: cl : Command line warning D9002 : ignoring unknown option '-shared' Rejecting C linker flag -shared due to cl : Command line warning D9002 : ignoring unknown option '-shared' sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int foo(void) {printf("hello"); return 0;} Pushing language C Popping language C Pushing language CUDA Popping language CUDA Pushing language Cxx Popping language Cxx Pushing language FC Popping language FC Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/libconftest.so -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/libconftest.so -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: libf2c.lib(main1.obj) : error LNK2019: unresolved external symbol _MAIN__ referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.setCompilers\libconftest.so : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: output: libf2c.lib(main1.obj) : error LNK2019: unresolved external symbol _MAIN__ referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.setCompilers\libconftest.so : fatal error LNK1120: 1 unresolved externals ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" #include int foo(void) {printf("hello"); return 0;} Deleting "LD_SHARED" Checking shared linker win32fe cl using flags ['-dynamic'] Checking for program /usr/bin/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 9.0/Common7/IDE/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 9.0/VC/BIN/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 9.0/Common7/Tools/win32fe...not found Checking for program /cygdrive/c/windows/Microsoft.NET/Framework/v3.5/win32fe...not found Checking for program /cygdrive/c/windows/Microsoft.NET/Framework/v2.0.50727/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 9.0/VC/VCPackages/win32fe...not found Checking for program /cygdrive/c/Program Files/Microsoft SDKs/Windows/v6.0A/bin/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/NVIDIA Corporation/PhysX/Common/win32fe...not found Checking for program /cygdrive/c/windows/system32/win32fe...not found Checking for program /cygdrive/c/windows/win32fe...not found Checking for program /cygdrive/c/windows/System32/Wbem/win32fe...not found Checking for program /cygdrive/c/windows/System32/WindowsPowerShell/v1.0/win32fe...not found Checking for program /cygdrive/c/Program Files/Intel/WiFi/bin/win32fe...not found Checking for program /cygdrive/c/Program Files/Common Files/Intel/WirelessCommon/win32fe...not found Checking for program /cygdrive/c/Program Files/MATLAB/R2014b/runtime/win64/win32fe...not found Checking for program /cygdrive/c/Program Files/MATLAB/R2014b/bin/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft SQL Server/90/Tools/binn/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Lua/5.1/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Lua/5.1/clibs/win32fe...not found Checking for program /cygdrive/c/cygwin/packages/petsc-3.4.5/bin/win32fe/win32fe...found Defined make macro "LD_SHARED" to "win32fe cl" sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe -dynamic -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe -dynamic -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: cl : Command line warning D9002 : ignoring unknown option '-dynamic' Rejecting C linker flag -dynamic due to cl : Command line warning D9002 : ignoring unknown option '-dynamic' sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int foo(void) {printf("hello"); return 0;} Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/libconftest.so -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/libconftest.so -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: libf2c.lib(main1.obj) : error LNK2019: unresolved external symbol _MAIN__ referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.setCompilers\libconftest.so : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: output: libf2c.lib(main1.obj) : error LNK2019: unresolved external symbol _MAIN__ referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.setCompilers\libconftest.so : fatal error LNK1120: 1 unresolved externals ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" #include int foo(void) {printf("hello"); return 0;} Deleting "LD_SHARED" Checking shared linker win32fe cl using flags ['-qmkshrobj'] Checking for program /usr/bin/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 9.0/Common7/IDE/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 9.0/VC/BIN/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 9.0/Common7/Tools/win32fe...not found Checking for program /cygdrive/c/windows/Microsoft.NET/Framework/v3.5/win32fe...not found Checking for program /cygdrive/c/windows/Microsoft.NET/Framework/v2.0.50727/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft Visual Studio 9.0/VC/VCPackages/win32fe...not found Checking for program /cygdrive/c/Program Files/Microsoft SDKs/Windows/v6.0A/bin/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/NVIDIA Corporation/PhysX/Common/win32fe...not found Checking for program /cygdrive/c/windows/system32/win32fe...not found Checking for program /cygdrive/c/windows/win32fe...not found Checking for program /cygdrive/c/windows/System32/Wbem/win32fe...not found Checking for program /cygdrive/c/windows/System32/WindowsPowerShell/v1.0/win32fe...not found Checking for program /cygdrive/c/Program Files/Intel/WiFi/bin/win32fe...not found Checking for program /cygdrive/c/Program Files/Common Files/Intel/WirelessCommon/win32fe...not found Checking for program /cygdrive/c/Program Files/MATLAB/R2014b/runtime/win64/win32fe...not found Checking for program /cygdrive/c/Program Files/MATLAB/R2014b/bin/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Microsoft SQL Server/90/Tools/binn/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Lua/5.1/win32fe...not found Checking for program /cygdrive/c/Program Files (x86)/Lua/5.1/clibs/win32fe...not found Checking for program /cygdrive/c/cygwin/packages/petsc-3.4.5/bin/win32fe/win32fe...found Defined make macro "LD_SHARED" to "win32fe cl" sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe -qmkshrobj -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe -qmkshrobj -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: cl : Command line warning D9002 : ignoring unknown option '-qmkshrobj' Rejecting C linker flag -qmkshrobj due to cl : Command line warning D9002 : ignoring unknown option '-qmkshrobj' sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int foo(void) {printf("hello"); return 0;} Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/libconftest.so -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/libconftest.so -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: libf2c.lib(main1.obj) : error LNK2019: unresolved external symbol _MAIN__ referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.setCompilers\libconftest.so : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: output: libf2c.lib(main1.obj) : error LNK2019: unresolved external symbol _MAIN__ referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.setCompilers\libconftest.so : fatal error LNK1120: 1 unresolved externals ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" #include int foo(void) {printf("hello"); return 0;} Deleting "LD_SHARED" sh: uname -s Executing: uname -s sh: CYGWIN_NT-6.1-WOW64 Pushing language C Popping language C Pushing language CUDA Popping language CUDA Pushing language Cxx Popping language Cxx Pushing language FC Popping language FC Checking shared linker /usr/bin/ar using flags [] Checking for program /usr/bin/ar...found Defined make macro "LD_SHARED" to "/usr/bin/ar" sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int foo(void) {printf("hello"); return 0;} Pushing language C Popping language C sh: /usr/bin/ar cr /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/libconftest.lib /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o ; /usr/bin/ranlib /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/libconftest.lib Executing: /usr/bin/ar cr /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/libconftest.lib /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o ; /usr/bin/ranlib /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/libconftest.lib sh: sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int foo(void); int main() { int ret = foo(); if(ret);; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib -L/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -lconftest Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib -L/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -lconftest sh: Using shared linker /usr/bin/ar with flags [] and library extension lib sh: uname -s Executing: uname -s sh: CYGWIN_NT-6.1-WOW64 ================================================================================ TEST checkSharedLinkerPaths from config.setCompilers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/setCompilers.py:1290) TESTING: checkSharedLinkerPaths from config.setCompilers(config/BuildSystem/config/setCompilers.py:1290) Determine the shared linker path options - IRIX: -rpath - Linux, OSF: -Wl,-rpath, - Solaris: -R - FreeBSD: -Wl,-R, Pushing language C sh: uname -s Executing: uname -s sh: CYGWIN_NT-6.1-WOW64 sh: win32fe cl -V Executing: win32fe cl -V sh: cl : Command line error D8004 : '/V' requires an argument Trying C linker flag -Wl,-rpath, sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe -Wl,-rpath,/cygdrive/c/cygwin/packages/petsc-3.4.5 -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe -Wl,-rpath,/cygdrive/c/cygwin/packages/petsc-3.4.5 -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: cl : Command line error D8021 : invalid numeric argument '/Wl,-rpath,/cygdrive/c/cygwin/packages/petsc-3.4.5' Possible ERROR while running linker: output: cl : Command line error D8021 : invalid numeric argument '/Wl,-rpath,/cygdrive/c/cygwin/packages/petsc-3.4.5' ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe -Wl,-rpath,/cygdrive/c/cygwin/packages/petsc-3.4.5 -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejecting linker flag -Wl,-rpath,/cygdrive/c/cygwin/packages/petsc-3.4.5 due to nonzero status from link Rejected C linker flag -Wl,-rpath, Trying C linker flag -R sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe -R/cygdrive/c/cygwin/packages/petsc-3.4.5 -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe -R/cygdrive/c/cygwin/packages/petsc-3.4.5 -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: cl : Command line warning D9002 : ignoring unknown option '-R/cygdrive/c/cygwin/packages/petsc-3.4.5' Rejecting C linker flag -R/cygdrive/c/cygwin/packages/petsc-3.4.5 due to cl : Command line warning D9002 : ignoring unknown option '-R/cygdrive/c/cygwin/packages/petsc-3.4.5' Rejected C linker flag -R Trying C linker flag -rpath sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe -rpath /cygdrive/c/cygwin/packages/petsc-3.4.5 -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe -rpath /cygdrive/c/cygwin/packages/petsc-3.4.5 -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: cl : Command line warning D9002 : ignoring unknown option '-rpath' cl : Command line warning D9024 : unrecognized source file type 'C:\cygwin\packages\petsc-3.4.5', object file assumed LINK : fatal error LNK1104: cannot open file 'C:\cygwin\packages\petsc-3.4.5' Possible ERROR while running linker: output: cl : Command line warning D9002 : ignoring unknown option '-rpath' cl : Command line warning D9024 : unrecognized source file type 'C:\cygwin\packages\petsc-3.4.5', object file assumed LINK : fatal error LNK1104: cannot open file 'C:\cygwin\packages\petsc-3.4.5' ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe -rpath /cygdrive/c/cygwin/packages/petsc-3.4.5 -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejecting linker flag -rpath /cygdrive/c/cygwin/packages/petsc-3.4.5 due to nonzero status from link Rejecting C linker flag -rpath /cygdrive/c/cygwin/packages/petsc-3.4.5 due to cl : Command line warning D9002 : ignoring unknown option '-rpath' cl : Command line warning D9024 : unrecognized source file type 'C:\cygwin\packages\petsc-3.4.5', object file assumed LINK : fatal error LNK1104: cannot open file 'C:\cygwin\packages\petsc-3.4.5' Rejected C linker flag -rpath Trying C linker flag -Wl,-R, sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe -Wl,-R,/cygdrive/c/cygwin/packages/petsc-3.4.5 -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe -Wl,-R,/cygdrive/c/cygwin/packages/petsc-3.4.5 -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: cl : Command line error D8021 : invalid numeric argument '/Wl,-R,/cygdrive/c/cygwin/packages/petsc-3.4.5' Possible ERROR while running linker: output: cl : Command line error D8021 : invalid numeric argument '/Wl,-R,/cygdrive/c/cygwin/packages/petsc-3.4.5' ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe -Wl,-R,/cygdrive/c/cygwin/packages/petsc-3.4.5 -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejecting linker flag -Wl,-R,/cygdrive/c/cygwin/packages/petsc-3.4.5 due to nonzero status from link Rejected C linker flag -Wl,-R, Popping language C Pushing language Cxx sh: uname -s Executing: uname -s sh: CYGWIN_NT-6.1-WOW64 sh: win32fe cl -V Executing: win32fe cl -V sh: cl : Command line error D8004 : '/V' requires an argument Trying Cxx linker flag -Wl,-rpath, sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.cc Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.cc sh: conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language CXX Popping language CXX sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe -Wl,-rpath,/cygdrive/c/cygwin/packages/petsc-3.4.5 -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe -Wl,-rpath,/cygdrive/c/cygwin/packages/petsc-3.4.5 -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: cl : Command line error D8021 : invalid numeric argument '/Wl,-rpath,/cygdrive/c/cygwin/packages/petsc-3.4.5' Possible ERROR while running linker: output: cl : Command line error D8021 : invalid numeric argument '/Wl,-rpath,/cygdrive/c/cygwin/packages/petsc-3.4.5' ret = 512 Pushing language CXX Popping language CXX in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe -Wl,-rpath,/cygdrive/c/cygwin/packages/petsc-3.4.5 -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejecting linker flag -Wl,-rpath,/cygdrive/c/cygwin/packages/petsc-3.4.5 due to nonzero status from link Rejected Cxx linker flag -Wl,-rpath, Trying Cxx linker flag -R sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.cc Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.cc sh: conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language CXX Popping language CXX sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe -R/cygdrive/c/cygwin/packages/petsc-3.4.5 -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe -R/cygdrive/c/cygwin/packages/petsc-3.4.5 -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: cl : Command line warning D9002 : ignoring unknown option '-R/cygdrive/c/cygwin/packages/petsc-3.4.5' Rejecting Cxx linker flag -R/cygdrive/c/cygwin/packages/petsc-3.4.5 due to cl : Command line warning D9002 : ignoring unknown option '-R/cygdrive/c/cygwin/packages/petsc-3.4.5' Rejected Cxx linker flag -R Trying Cxx linker flag -rpath sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.cc Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.cc sh: conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language CXX Popping language CXX sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe -rpath /cygdrive/c/cygwin/packages/petsc-3.4.5 -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe -rpath /cygdrive/c/cygwin/packages/petsc-3.4.5 -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: cl : Command line warning D9002 : ignoring unknown option '-rpath' cl : Command line warning D9024 : unrecognized source file type 'C:\cygwin\packages\petsc-3.4.5', object file assumed LINK : fatal error LNK1104: cannot open file 'C:\cygwin\packages\petsc-3.4.5' Possible ERROR while running linker: output: cl : Command line warning D9002 : ignoring unknown option '-rpath' cl : Command line warning D9024 : unrecognized source file type 'C:\cygwin\packages\petsc-3.4.5', object file assumed LINK : fatal error LNK1104: cannot open file 'C:\cygwin\packages\petsc-3.4.5' ret = 512 Pushing language CXX Popping language CXX in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe -rpath /cygdrive/c/cygwin/packages/petsc-3.4.5 -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejecting linker flag -rpath /cygdrive/c/cygwin/packages/petsc-3.4.5 due to nonzero status from link Rejecting Cxx linker flag -rpath /cygdrive/c/cygwin/packages/petsc-3.4.5 due to cl : Command line warning D9002 : ignoring unknown option '-rpath' cl : Command line warning D9024 : unrecognized source file type 'C:\cygwin\packages\petsc-3.4.5', object file assumed LINK : fatal error LNK1104: cannot open file 'C:\cygwin\packages\petsc-3.4.5' Rejected Cxx linker flag -rpath Trying Cxx linker flag -Wl,-R, sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.cc Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.cc sh: conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language CXX Popping language CXX sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe -Wl,-R,/cygdrive/c/cygwin/packages/petsc-3.4.5 -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe -Wl,-R,/cygdrive/c/cygwin/packages/petsc-3.4.5 -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: cl : Command line error D8021 : invalid numeric argument '/Wl,-R,/cygdrive/c/cygwin/packages/petsc-3.4.5' Possible ERROR while running linker: output: cl : Command line error D8021 : invalid numeric argument '/Wl,-R,/cygdrive/c/cygwin/packages/petsc-3.4.5' ret = 512 Pushing language CXX Popping language CXX in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe -Wl,-R,/cygdrive/c/cygwin/packages/petsc-3.4.5 -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejecting linker flag -Wl,-R,/cygdrive/c/cygwin/packages/petsc-3.4.5 due to nonzero status from link Rejected Cxx linker flag -Wl,-R, Popping language Cxx ================================================================================ TEST checkLibC from config.setCompilers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/setCompilers.py:1325) TESTING: checkLibC from config.setCompilers(config/BuildSystem/config/setCompilers.py:1325) Test whether we need to explicitly include libc in shared linking - Mac OSX requires an explicit reference to libc for shared linking ================================================================================ TEST checkDynamicLinker from config.setCompilers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/setCompilers.py:1374) TESTING: checkDynamicLinker from config.setCompilers(config/BuildSystem/config/setCompilers.py:1374) Check that the linker can dynamicaly load shared libraries Checking for header: dlfcn.h All intermediate test results are stored in /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers sh: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c Executing: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c sh: conftest.c #line 1 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 7 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 11 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 15 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 17 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 2 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 8 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 9 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 10 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 3 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.headers\conftest.c(3) : fatal error C1083: Cannot open include file: 'dlfcn.h': No such file or directory Possible ERROR while running preprocessor: ret = 512 Source: #include "confdefs.h" #include "conffix.h" #include Dynamic loading disabled since dlfcn.h was missing ================================================================================ TEST output from config.setCompilers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/setCompilers.py:1420) TESTING: output from config.setCompilers(config/BuildSystem/config/setCompilers.py:1420) Output module data as defines and substitutions Substituting "CC" with "win32fe cl" Substituting "CFLAGS" with "-I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include" Defined make macro "CC_LINKER_SLFLAG" to "-L" Substituting "CPP" with "win32fe cl -E" Substituting "CPPFLAGS" with "" Substituting "CXX" with "win32fe cl" Substituting "CXX_CXXFLAGS" with "" Substituting "CXXFLAGS" with "-I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include" Substituting "CXX_LINKER_SLFLAG" with "-L" Substituting "CXXCPP" with "win32fe cl -E" Substituting "CXXCPPFLAGS" with "" Substituting "FC" with "" Substituting "LDFLAGS" with "" Substituting "LIBS" with "/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib" Substituting "SHARED_LIBRARY_FLAG" with "" ================================================================================ TEST configureCompilerFlags from config.compilerFlags(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/compilerFlags.py:65) TESTING: configureCompilerFlags from config.compilerFlags(config/BuildSystem/config/compilerFlags.py:65) Get the default compiler flags Pushing language C sh: win32fe cl --version Executing: win32fe cl --version sh: Win32 Development Tool Front End, version 1.10.1 Wed Oct 19 20:45:06 CDT 2011 Microsoft (R) 32-bit C/C++ Optimizing Compiler Version 15.00.21022.08 for 80x86 getCompilerVersion: win32fe cl Win32 Development Tool Front End, version 1.10.1 Wed Oct 19 20:45:06 CDT 2011 \nMicrosoft (R) 32-bit C/C++ Optimizing Compiler Version 15.00.21022.08 for 80x86 Ignoring default options which were overridden using --CFLAGS -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include sh: win32fe cl --help Executing: win32fe cl --help sh: Win32 Development Tool Front End, version 1.10.1 Wed Oct 19 20:45:06 CDT 2011 Usage: win32fe -- - must be the first argument to win32fe : {cl,icl,df,f90,ifl,bcc32,lib,tlib} cl: Microsoft 32-bit C/C++ Optimizing Compiler icl: Intel C/C++ Optimizing Compiler df: Compaq Visual Fortran Optimizing Compiler f90: Compaq Visual Fortran90 Optimizing Compiler ifl: Intel Fortran Optimizing Compiler ifort: Intel Fortran Optimizing Compiler nvcc: NVIDIA CUDA Compiler Driver bcc32: Borland C++ for Win32 lib: Microsoft Library Manager tlib: Borland Library Manager : --help: Output this help message and help for --autodetect: Attempt automatic detection of installation --path : specifies an addition to the PATH that is required (ex. the location of a required .dll) --use : specifies the variant of to use --verbose: Echo to stdout the translated commandline and other diagnostic information --version: Output version info for win32fe and --wait_for_debugger: Inserts an infinite wait after creation of and outputs PID so one can manually attach a debugger to the current process. In the debugger, one must set: tool::waitfordebugger = 0 to continue the execution normally. --win-l: For compilers, define -lfoo to link foo.lib instead of libfoo.lib --woff: Suppress win32fe specific warning messages ================================================================================= For compilers: win32fe will map the following to their native options: -c: Compile Only, generates an object file with .o extension This will invoke the compiler once for each file listed. -l: Link the file lib.lib or if using --win-l also, .lib -o : Output= context dependent -D: Define -I: Add to the include path -L: Add to the link path -g: Generate debug symbols in objects when specified for compilation, and in executables when specified for linking (some compilers specification at both times for full debugging support). -O: Enable compiletime and/or linktime optimizations. Ex: win32fe cl -g -c foo.c --verbose -Iinclude Note: win32fe will automatically find the system library paths and system include paths, relieving the user of the need to invoke a particular shell. ========================================================================= cl specific help: win32fe uses -nologo by default for nonverbose output. Use the flag: -logo to disable this feature. -g is identical to -Z7. -O is identical to -O2. ========================================================================= Microsoft (R) 32-bit C/C++ Optimizing Compiler Version 15.00.21022.08 for 80x86 Copyright (C) Microsoft Corporation. All rights reserved. C/C++ COMPILER OPTIONS -OPTIMIZATION- /O1 minimize space /O2 maximize speed /Ob inline expansion (default n=0) /Od disable optimizations (default) /Og enable global optimization /Oi[-] enable intrinsic functions /Os favor code space /Ot favor code speed /Ox maximum optimizations /Oy[-] enable frame pointer omission -CODE GENERATION- /GF enable read-only string pooling /Gm[-] enable minimal rebuild /Gy[-] separate functions for linker /GS[-] enable security checks /GR[-] enable C++ RTTI /GX[-] enable C++ EH (same as /EHsc) /EHs enable C++ EH (no SEH exceptions) /EHa enable C++ EH (w/ SEH exceptions) /EHc extern "C" defaults to nothrow /fp: choose floating-point model: except[-] - consider floating-point exceptions when generating code fast - "fast" floating-point model; results are less predictable precise - "precise" floating-point model; results are predictable strict - "strict" floating-point model (implies /fp:except) /Qfast_transcendentals generate inline FP intrinsics even with /fp:except /GL[-] enable link-time code generation /GA optimize for Windows Application /Ge force stack checking for all funcs /Gs[num] control stack checking calls /Gh enable _penter function call /GH enable _pexit function call /GT generate fiber-safe TLS accesses /RTC1 Enable fast checks (/RTCsu) /RTCc Convert to smaller type checks /RTCs Stack Frame runtime checking /RTCu Uninitialized local usage checks /clr[:option] compile for common language runtime, where option is: pure - produce IL-only output file (no native executable code) safe - produce IL-only verifiable output file oldSyntax - accept the Managed Extensions syntax from Visual C++ 2002/2003 initialAppDomain - enable initial AppDomain behavior of Visual C++ 2002 noAssembly - do not produce an assembly /Gd __cdecl calling convention /Gr __fastcall calling convention /Gz __stdcall calling convention /GZ Enable stack checks (/RTCs) /QIfist[-] use FIST instead of ftol() /hotpatch ensure function padding for hotpatchable images /arch: minimum CPU architecture requirements, one of: SSE - enable use of instructions available with SSE enabled CPUs SSE2 - enable use of instructions available with SSE2 enabled CPUs /Qimprecise_fwaits generate FWAITs only on "try" boundaries, not inside "try" -OUTPUT FILES- /Fa[file] name assembly listing file /FA[scu] configure assembly listing /Fd[file] name .PDB file /Fe name executable file /Fm[file] name map file /Fo name object file /Fp name precompiled header file /Fr[file] name source browser file /FR[file] name extended .SBR file /doc[file] process XML documentation comments and optionally name the .xdc file -PREPROCESSOR- /AI add to assembly search path /FU forced using assembly/module /C don't strip comments /D{=|#} define macro /E preprocess to stdout /EP preprocess to stdout, no #line /P preprocess to file /Fx merge injected code to file /FI name forced include file /U remove predefined macro /u remove all predefined macros /I add to include search path /X ignore "standard places" -LANGUAGE- /Zi enable debugging information /Z7 enable old-style debug info /Zp[n] pack structs on n-byte boundary /Za disable extensions /Ze enable extensions (default) /Zl omit default library name in .OBJ /Zg generate function prototypes /Zs syntax check only /vd{0|1|2} disable/enable vtordisp /vm type of pointers to members /Zc:arg1[,arg2] C++ language conformance, where arguments can be: forScope[-] - enforce Standard C++ for scoping rules wchar_t[-] - wchar_t is the native type, not a typedef /ZI enable Edit and Continue debug info /openmp enable OpenMP 2.0 language extensions -MISCELLANEOUS- @ options response file /?, /help print this help message /bigobj generate extended object format /c compile only, no link /errorReport:option Report internal compiler errors to Microsoft none - do not send report prompt - prompt to immediately send report queue - at next admin logon, prompt to send report (default) send - send report automatically /FC use full pathnames in diagnostics /H max external name length /J default char type is unsigned /MP[n] use up to 'n' processes for compilation /nologo suppress copyright message /showIncludes show include file names /Tc compile file as .c /Tp compile file as .cpp /TC compile all files as .c /TP compile all files as .cpp /V set version string /w disable all warnings /wd disable warning n /we treat warning n as an error /wo issue warning n once /w set warning level 1-4 for n /W set warning level (default n=1) /Wall enable all warnings /WL enable one line diagnostics /WX treat warnings as errors /Yc[file] create .PCH file /Yd put debug info in every .OBJ /Yl[sym] inject .PCH ref for debug lib /Yu[file] use .PCH file /Y- disable all PCH options /Zm max memory alloc (% of default) /Wp64 enable 64 bit porting warnings -LINKING- /LD Create .DLL /LDd Create .DLL debug library /LN Create a .netmodule /F set stack size /link [linker options and libraries] /MD link with MSVCRT.LIB /MT link with LIBCMT.LIB /MDd link with MSVCRTD.LIB debug lib /MTd link with LIBCMTD.LIB debug lib sh: win32fe cl --help Executing: win32fe cl --help sh: Win32 Development Tool Front End, version 1.10.1 Wed Oct 19 20:45:06 CDT 2011 Usage: win32fe -- - must be the first argument to win32fe : {cl,icl,df,f90,ifl,bcc32,lib,tlib} cl: Microsoft 32-bit C/C++ Optimizing Compiler icl: Intel C/C++ Optimizing Compiler df: Compaq Visual Fortran Optimizing Compiler f90: Compaq Visual Fortran90 Optimizing Compiler ifl: Intel Fortran Optimizing Compiler ifort: Intel Fortran Optimizing Compiler nvcc: NVIDIA CUDA Compiler Driver bcc32: Borland C++ for Win32 lib: Microsoft Library Manager tlib: Borland Library Manager : --help: Output this help message and help for --autodetect: Attempt automatic detection of installation --path : specifies an addition to the PATH that is required (ex. the location of a required .dll) --use : specifies the variant of to use --verbose: Echo to stdout the translated commandline and other diagnostic information --version: Output version info for win32fe and --wait_for_debugger: Inserts an infinite wait after creation of and outputs PID so one can manually attach a debugger to the current process. In the debugger, one must set: tool::waitfordebugger = 0 to continue the execution normally. --win-l: For compilers, define -lfoo to link foo.lib instead of libfoo.lib --woff: Suppress win32fe specific warning messages ================================================================================= For compilers: win32fe will map the following to their native options: -c: Compile Only, generates an object file with .o extension This will invoke the compiler once for each file listed. -l: Link the file lib.lib or if using --win-l also, .lib -o : Output= context dependent -D: Define -I: Add to the include path -L: Add to the link path -g: Generate debug symbols in objects when specified for compilation, and in executables when specified for linking (some compilers specification at both times for full debugging support). -O: Enable compiletime and/or linktime optimizations. Ex: win32fe cl -g -c foo.c --verbose -Iinclude Note: win32fe will automatically find the system library paths and system include paths, relieving the user of the need to invoke a particular shell. ========================================================================= cl specific help: win32fe uses -nologo by default for nonverbose output. Use the flag: -logo to disable this feature. -g is identical to -Z7. -O is identical to -O2. ========================================================================= Microsoft (R) 32-bit C/C++ Optimizing Compiler Version 15.00.21022.08 for 80x86 Copyright (C) Microsoft Corporation. All rights reserved. C/C++ COMPILER OPTIONS -OPTIMIZATION- /O1 minimize space /O2 maximize speed /Ob inline expansion (default n=0) /Od disable optimizations (default) /Og enable global optimization /Oi[-] enable intrinsic functions /Os favor code space /Ot favor code speed /Ox maximum optimizations /Oy[-] enable frame pointer omission -CODE GENERATION- /GF enable read-only string pooling /Gm[-] enable minimal rebuild /Gy[-] separate functions for linker /GS[-] enable security checks /GR[-] enable C++ RTTI /GX[-] enable C++ EH (same as /EHsc) /EHs enable C++ EH (no SEH exceptions) /EHa enable C++ EH (w/ SEH exceptions) /EHc extern "C" defaults to nothrow /fp: choose floating-point model: except[-] - consider floating-point exceptions when generating code fast - "fast" floating-point model; results are less predictable precise - "precise" floating-point model; results are predictable strict - "strict" floating-point model (implies /fp:except) /Qfast_transcendentals generate inline FP intrinsics even with /fp:except /GL[-] enable link-time code generation /GA optimize for Windows Application /Ge force stack checking for all funcs /Gs[num] control stack checking calls /Gh enable _penter function call /GH enable _pexit function call /GT generate fiber-safe TLS accesses /RTC1 Enable fast checks (/RTCsu) /RTCc Convert to smaller type checks /RTCs Stack Frame runtime checking /RTCu Uninitialized local usage checks /clr[:option] compile for common language runtime, where option is: pure - produce IL-only output file (no native executable code) safe - produce IL-only verifiable output file oldSyntax - accept the Managed Extensions syntax from Visual C++ 2002/2003 initialAppDomain - enable initial AppDomain behavior of Visual C++ 2002 noAssembly - do not produce an assembly /Gd __cdecl calling convention /Gr __fastcall calling convention /Gz __stdcall calling convention /GZ Enable stack checks (/RTCs) /QIfist[-] use FIST instead of ftol() /hotpatch ensure function padding for hotpatchable images /arch: minimum CPU architecture requirements, one of: SSE - enable use of instructions available with SSE enabled CPUs SSE2 - enable use of instructions available with SSE2 enabled CPUs /Qimprecise_fwaits generate FWAITs only on "try" boundaries, not inside "try" -OUTPUT FILES- /Fa[file] name assembly listing file /FA[scu] configure assembly listing /Fd[file] name .PDB file /Fe name executable file /Fm[file] name map file /Fo name object file /Fp name precompiled header file /Fr[file] name source browser file /FR[file] name extended .SBR file /doc[file] process XML documentation comments and optionally name the .xdc file -PREPROCESSOR- /AI add to assembly search path /FU forced using assembly/module /C don't strip comments /D{=|#} define macro /E preprocess to stdout /EP preprocess to stdout, no #line /P preprocess to file /Fx merge injected code to file /FI name forced include file /U remove predefined macro /u remove all predefined macros /I add to include search path /X ignore "standard places" -LANGUAGE- /Zi enable debugging information /Z7 enable old-style debug info /Zp[n] pack structs on n-byte boundary /Za disable extensions /Ze enable extensions (default) /Zl omit default library name in .OBJ /Zg generate function prototypes /Zs syntax check only /vd{0|1|2} disable/enable vtordisp /vm type of pointers to members /Zc:arg1[,arg2] C++ language conformance, where arguments can be: forScope[-] - enforce Standard C++ for scoping rules wchar_t[-] - wchar_t is the native type, not a typedef /ZI enable Edit and Continue debug info /openmp enable OpenMP 2.0 language extensions -MISCELLANEOUS- @ options response file /?, /help print this help message /bigobj generate extended object format /c compile only, no link /errorReport:option Report internal compiler errors to Microsoft none - do not send report prompt - prompt to immediately send report queue - at next admin logon, prompt to send report (default) send - send report automatically /FC use full pathnames in diagnostics /H max external name length /J default char type is unsigned /MP[n] use up to 'n' processes for compilation /nologo suppress copyright message /showIncludes show include file names /Tc compile file as .c /Tp compile file as .cpp /TC compile all files as .c /TP compile all files as .cpp /V set version string /w disable all warnings /wd disable warning n /we treat warning n as an error /wo issue warning n once /w set warning level 1-4 for n /W set warning level (default n=1) /Wall enable all warnings /WL enable one line diagnostics /WX treat warnings as errors /Yc[file] create .PCH file /Yd put debug info in every .OBJ /Yl[sym] inject .PCH ref for debug lib /Yu[file] use .PCH file /Y- disable all PCH options /Zm max memory alloc (% of default) /Wp64 enable 64 bit porting warnings -LINKING- /LD Create .DLL /LDd Create .DLL debug library /LN Create a .netmodule /F set stack size /link [linker options and libraries] /MD link with MSVCRT.LIB /MT link with LIBCMT.LIB /MDd link with MSVCRTD.LIB debug lib /MTd link with LIBCMTD.LIB debug lib sh: win32fe cl --help Executing: win32fe cl --help sh: Win32 Development Tool Front End, version 1.10.1 Wed Oct 19 20:45:06 CDT 2011 Usage: win32fe -- - must be the first argument to win32fe : {cl,icl,df,f90,ifl,bcc32,lib,tlib} cl: Microsoft 32-bit C/C++ Optimizing Compiler icl: Intel C/C++ Optimizing Compiler df: Compaq Visual Fortran Optimizing Compiler f90: Compaq Visual Fortran90 Optimizing Compiler ifl: Intel Fortran Optimizing Compiler ifort: Intel Fortran Optimizing Compiler nvcc: NVIDIA CUDA Compiler Driver bcc32: Borland C++ for Win32 lib: Microsoft Library Manager tlib: Borland Library Manager : --help: Output this help message and help for --autodetect: Attempt automatic detection of installation --path : specifies an addition to the PATH that is required (ex. the location of a required .dll) --use : specifies the variant of to use --verbose: Echo to stdout the translated commandline and other diagnostic information --version: Output version info for win32fe and --wait_for_debugger: Inserts an infinite wait after creation of and outputs PID so one can manually attach a debugger to the current process. In the debugger, one must set: tool::waitfordebugger = 0 to continue the execution normally. --win-l: For compilers, define -lfoo to link foo.lib instead of libfoo.lib --woff: Suppress win32fe specific warning messages ================================================================================= For compilers: win32fe will map the following to their native options: -c: Compile Only, generates an object file with .o extension This will invoke the compiler once for each file listed. -l: Link the file lib.lib or if using --win-l also, .lib -o : Output= context dependent -D: Define -I: Add to the include path -L: Add to the link path -g: Generate debug symbols in objects when specified for compilation, and in executables when specified for linking (some compilers specification at both times for full debugging support). -O: Enable compiletime and/or linktime optimizations. Ex: win32fe cl -g -c foo.c --verbose -Iinclude Note: win32fe will automatically find the system library paths and system include paths, relieving the user of the need to invoke a particular shell. ========================================================================= cl specific help: win32fe uses -nologo by default for nonverbose output. Use the flag: -logo to disable this feature. -g is identical to -Z7. -O is identical to -O2. ========================================================================= Microsoft (R) 32-bit C/C++ Optimizing Compiler Version 15.00.21022.08 for 80x86 Copyright (C) Microsoft Corporation. All rights reserved. C/C++ COMPILER OPTIONS -OPTIMIZATION- /O1 minimize space /O2 maximize speed /Ob inline expansion (default n=0) /Od disable optimizations (default) /Og enable global optimization /Oi[-] enable intrinsic functions /Os favor code space /Ot favor code speed /Ox maximum optimizations /Oy[-] enable frame pointer omission -CODE GENERATION- /GF enable read-only string pooling /Gm[-] enable minimal rebuild /Gy[-] separate functions for linker /GS[-] enable security checks /GR[-] enable C++ RTTI /GX[-] enable C++ EH (same as /EHsc) /EHs enable C++ EH (no SEH exceptions) /EHa enable C++ EH (w/ SEH exceptions) /EHc extern "C" defaults to nothrow /fp: choose floating-point model: except[-] - consider floating-point exceptions when generating code fast - "fast" floating-point model; results are less predictable precise - "precise" floating-point model; results are predictable strict - "strict" floating-point model (implies /fp:except) /Qfast_transcendentals generate inline FP intrinsics even with /fp:except /GL[-] enable link-time code generation /GA optimize for Windows Application /Ge force stack checking for all funcs /Gs[num] control stack checking calls /Gh enable _penter function call /GH enable _pexit function call /GT generate fiber-safe TLS accesses /RTC1 Enable fast checks (/RTCsu) /RTCc Convert to smaller type checks /RTCs Stack Frame runtime checking /RTCu Uninitialized local usage checks /clr[:option] compile for common language runtime, where option is: pure - produce IL-only output file (no native executable code) safe - produce IL-only verifiable output file oldSyntax - accept the Managed Extensions syntax from Visual C++ 2002/2003 initialAppDomain - enable initial AppDomain behavior of Visual C++ 2002 noAssembly - do not produce an assembly /Gd __cdecl calling convention /Gr __fastcall calling convention /Gz __stdcall calling convention /GZ Enable stack checks (/RTCs) /QIfist[-] use FIST instead of ftol() /hotpatch ensure function padding for hotpatchable images /arch: minimum CPU architecture requirements, one of: SSE - enable use of instructions available with SSE enabled CPUs SSE2 - enable use of instructions available with SSE2 enabled CPUs /Qimprecise_fwaits generate FWAITs only on "try" boundaries, not inside "try" -OUTPUT FILES- /Fa[file] name assembly listing file /FA[scu] configure assembly listing /Fd[file] name .PDB file /Fe name executable file /Fm[file] name map file /Fo name object file /Fp name precompiled header file /Fr[file] name source browser file /FR[file] name extended .SBR file /doc[file] process XML documentation comments and optionally name the .xdc file -PREPROCESSOR- /AI add to assembly search path /FU forced using assembly/module /C don't strip comments /D{=|#} define macro /E preprocess to stdout /EP preprocess to stdout, no #line /P preprocess to file /Fx merge injected code to file /FI name forced include file /U remove predefined macro /u remove all predefined macros /I add to include search path /X ignore "standard places" -LANGUAGE- /Zi enable debugging information /Z7 enable old-style debug info /Zp[n] pack structs on n-byte boundary /Za disable extensions /Ze enable extensions (default) /Zl omit default library name in .OBJ /Zg generate function prototypes /Zs syntax check only /vd{0|1|2} disable/enable vtordisp /vm type of pointers to members /Zc:arg1[,arg2] C++ language conformance, where arguments can be: forScope[-] - enforce Standard C++ for scoping rules wchar_t[-] - wchar_t is the native type, not a typedef /ZI enable Edit and Continue debug info /openmp enable OpenMP 2.0 language extensions -MISCELLANEOUS- @ options response file /?, /help print this help message /bigobj generate extended object format /c compile only, no link /errorReport:option Report internal compiler errors to Microsoft none - do not send report prompt - prompt to immediately send report queue - at next admin logon, prompt to send report (default) send - send report automatically /FC use full pathnames in diagnostics /H max external name length /J default char type is unsigned /MP[n] use up to 'n' processes for compilation /nologo suppress copyright message /showIncludes show include file names /Tc compile file as .c /Tp compile file as .cpp /TC compile all files as .c /TP compile all files as .cpp /V set version string /w disable all warnings /wd disable warning n /we treat warning n as an error /wo issue warning n once /w set warning level 1-4 for n /W set warning level (default n=1) /Wall enable all warnings /WL enable one line diagnostics /WX treat warnings as errors /Yc[file] create .PCH file /Yd put debug info in every .OBJ /Yl[sym] inject .PCH ref for debug lib /Yu[file] use .PCH file /Y- disable all PCH options /Zm max memory alloc (% of default) /Wp64 enable 64 bit porting warnings -LINKING- /LD Create .DLL /LDd Create .DLL debug library /LN Create a .netmodule /F set stack size /link [linker options and libraries] /MD link with MSVCRT.LIB /MT link with LIBCMT.LIB /MDd link with MSVCRTD.LIB debug lib /MTd link with LIBCMTD.LIB debug lib Trying C compiler flag -Z7 sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Added C compiler flag -Z7 Popping language C Pushing language Cxx sh: win32fe cl --version Executing: win32fe cl --version sh: Win32 Development Tool Front End, version 1.10.1 Wed Oct 19 20:45:06 CDT 2011 Microsoft (R) 32-bit C/C++ Optimizing Compiler Version 15.00.21022.08 for 80x86 getCompilerVersion: win32fe cl Win32 Development Tool Front End, version 1.10.1 Wed Oct 19 20:45:06 CDT 2011 \nMicrosoft (R) 32-bit C/C++ Optimizing Compiler Version 15.00.21022.08 for 80x86 Ignoring default options which were overridden using --CXXFLAGS -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include sh: win32fe cl --help Executing: win32fe cl --help sh: Win32 Development Tool Front End, version 1.10.1 Wed Oct 19 20:45:06 CDT 2011 Usage: win32fe -- - must be the first argument to win32fe : {cl,icl,df,f90,ifl,bcc32,lib,tlib} cl: Microsoft 32-bit C/C++ Optimizing Compiler icl: Intel C/C++ Optimizing Compiler df: Compaq Visual Fortran Optimizing Compiler f90: Compaq Visual Fortran90 Optimizing Compiler ifl: Intel Fortran Optimizing Compiler ifort: Intel Fortran Optimizing Compiler nvcc: NVIDIA CUDA Compiler Driver bcc32: Borland C++ for Win32 lib: Microsoft Library Manager tlib: Borland Library Manager : --help: Output this help message and help for --autodetect: Attempt automatic detection of installation --path : specifies an addition to the PATH that is required (ex. the location of a required .dll) --use : specifies the variant of to use --verbose: Echo to stdout the translated commandline and other diagnostic information --version: Output version info for win32fe and --wait_for_debugger: Inserts an infinite wait after creation of and outputs PID so one can manually attach a debugger to the current process. In the debugger, one must set: tool::waitfordebugger = 0 to continue the execution normally. --win-l: For compilers, define -lfoo to link foo.lib instead of libfoo.lib --woff: Suppress win32fe specific warning messages ================================================================================= For compilers: win32fe will map the following to their native options: -c: Compile Only, generates an object file with .o extension This will invoke the compiler once for each file listed. -l: Link the file lib.lib or if using --win-l also, .lib -o : Output= context dependent -D: Define -I: Add to the include path -L: Add to the link path -g: Generate debug symbols in objects when specified for compilation, and in executables when specified for linking (some compilers specification at both times for full debugging support). -O: Enable compiletime and/or linktime optimizations. Ex: win32fe cl -g -c foo.c --verbose -Iinclude Note: win32fe will automatically find the system library paths and system include paths, relieving the user of the need to invoke a particular shell. ========================================================================= cl specific help: win32fe uses -nologo by default for nonverbose output. Use the flag: -logo to disable this feature. -g is identical to -Z7. -O is identical to -O2. ========================================================================= Microsoft (R) 32-bit C/C++ Optimizing Compiler Version 15.00.21022.08 for 80x86 Copyright (C) Microsoft Corporation. All rights reserved. C/C++ COMPILER OPTIONS -OPTIMIZATION- /O1 minimize space /O2 maximize speed /Ob inline expansion (default n=0) /Od disable optimizations (default) /Og enable global optimization /Oi[-] enable intrinsic functions /Os favor code space /Ot favor code speed /Ox maximum optimizations /Oy[-] enable frame pointer omission -CODE GENERATION- /GF enable read-only string pooling /Gm[-] enable minimal rebuild /Gy[-] separate functions for linker /GS[-] enable security checks /GR[-] enable C++ RTTI /GX[-] enable C++ EH (same as /EHsc) /EHs enable C++ EH (no SEH exceptions) /EHa enable C++ EH (w/ SEH exceptions) /EHc extern "C" defaults to nothrow /fp: choose floating-point model: except[-] - consider floating-point exceptions when generating code fast - "fast" floating-point model; results are less predictable precise - "precise" floating-point model; results are predictable strict - "strict" floating-point model (implies /fp:except) /Qfast_transcendentals generate inline FP intrinsics even with /fp:except /GL[-] enable link-time code generation /GA optimize for Windows Application /Ge force stack checking for all funcs /Gs[num] control stack checking calls /Gh enable _penter function call /GH enable _pexit function call /GT generate fiber-safe TLS accesses /RTC1 Enable fast checks (/RTCsu) /RTCc Convert to smaller type checks /RTCs Stack Frame runtime checking /RTCu Uninitialized local usage checks /clr[:option] compile for common language runtime, where option is: pure - produce IL-only output file (no native executable code) safe - produce IL-only verifiable output file oldSyntax - accept the Managed Extensions syntax from Visual C++ 2002/2003 initialAppDomain - enable initial AppDomain behavior of Visual C++ 2002 noAssembly - do not produce an assembly /Gd __cdecl calling convention /Gr __fastcall calling convention /Gz __stdcall calling convention /GZ Enable stack checks (/RTCs) /QIfist[-] use FIST instead of ftol() /hotpatch ensure function padding for hotpatchable images /arch: minimum CPU architecture requirements, one of: SSE - enable use of instructions available with SSE enabled CPUs SSE2 - enable use of instructions available with SSE2 enabled CPUs /Qimprecise_fwaits generate FWAITs only on "try" boundaries, not inside "try" -OUTPUT FILES- /Fa[file] name assembly listing file /FA[scu] configure assembly listing /Fd[file] name .PDB file /Fe name executable file /Fm[file] name map file /Fo name object file /Fp name precompiled header file /Fr[file] name source browser file /FR[file] name extended .SBR file /doc[file] process XML documentation comments and optionally name the .xdc file -PREPROCESSOR- /AI add to assembly search path /FU forced using assembly/module /C don't strip comments /D{=|#} define macro /E preprocess to stdout /EP preprocess to stdout, no #line /P preprocess to file /Fx merge injected code to file /FI name forced include file /U remove predefined macro /u remove all predefined macros /I add to include search path /X ignore "standard places" -LANGUAGE- /Zi enable debugging information /Z7 enable old-style debug info /Zp[n] pack structs on n-byte boundary /Za disable extensions /Ze enable extensions (default) /Zl omit default library name in .OBJ /Zg generate function prototypes /Zs syntax check only /vd{0|1|2} disable/enable vtordisp /vm type of pointers to members /Zc:arg1[,arg2] C++ language conformance, where arguments can be: forScope[-] - enforce Standard C++ for scoping rules wchar_t[-] - wchar_t is the native type, not a typedef /ZI enable Edit and Continue debug info /openmp enable OpenMP 2.0 language extensions -MISCELLANEOUS- @ options response file /?, /help print this help message /bigobj generate extended object format /c compile only, no link /errorReport:option Report internal compiler errors to Microsoft none - do not send report prompt - prompt to immediately send report queue - at next admin logon, prompt to send report (default) send - send report automatically /FC use full pathnames in diagnostics /H max external name length /J default char type is unsigned /MP[n] use up to 'n' processes for compilation /nologo suppress copyright message /showIncludes show include file names /Tc compile file as .c /Tp compile file as .cpp /TC compile all files as .c /TP compile all files as .cpp /V set version string /w disable all warnings /wd disable warning n /we treat warning n as an error /wo issue warning n once /w set warning level 1-4 for n /W set warning level (default n=1) /Wall enable all warnings /WL enable one line diagnostics /WX treat warnings as errors /Yc[file] create .PCH file /Yd put debug info in every .OBJ /Yl[sym] inject .PCH ref for debug lib /Yu[file] use .PCH file /Y- disable all PCH options /Zm max memory alloc (% of default) /Wp64 enable 64 bit porting warnings -LINKING- /LD Create .DLL /LDd Create .DLL debug library /LN Create a .netmodule /F set stack size /link [linker options and libraries] /MD link with MSVCRT.LIB /MT link with LIBCMT.LIB /MDd link with MSVCRTD.LIB debug lib /MTd link with LIBCMTD.LIB debug lib sh: win32fe cl --help Executing: win32fe cl --help sh: Win32 Development Tool Front End, version 1.10.1 Wed Oct 19 20:45:06 CDT 2011 Usage: win32fe -- - must be the first argument to win32fe : {cl,icl,df,f90,ifl,bcc32,lib,tlib} cl: Microsoft 32-bit C/C++ Optimizing Compiler icl: Intel C/C++ Optimizing Compiler df: Compaq Visual Fortran Optimizing Compiler f90: Compaq Visual Fortran90 Optimizing Compiler ifl: Intel Fortran Optimizing Compiler ifort: Intel Fortran Optimizing Compiler nvcc: NVIDIA CUDA Compiler Driver bcc32: Borland C++ for Win32 lib: Microsoft Library Manager tlib: Borland Library Manager : --help: Output this help message and help for --autodetect: Attempt automatic detection of installation --path : specifies an addition to the PATH that is required (ex. the location of a required .dll) --use : specifies the variant of to use --verbose: Echo to stdout the translated commandline and other diagnostic information --version: Output version info for win32fe and --wait_for_debugger: Inserts an infinite wait after creation of and outputs PID so one can manually attach a debugger to the current process. In the debugger, one must set: tool::waitfordebugger = 0 to continue the execution normally. --win-l: For compilers, define -lfoo to link foo.lib instead of libfoo.lib --woff: Suppress win32fe specific warning messages ================================================================================= For compilers: win32fe will map the following to their native options: -c: Compile Only, generates an object file with .o extension This will invoke the compiler once for each file listed. -l: Link the file lib.lib or if using --win-l also, .lib -o : Output= context dependent -D: Define -I: Add to the include path -L: Add to the link path -g: Generate debug symbols in objects when specified for compilation, and in executables when specified for linking (some compilers specification at both times for full debugging support). -O: Enable compiletime and/or linktime optimizations. Ex: win32fe cl -g -c foo.c --verbose -Iinclude Note: win32fe will automatically find the system library paths and system include paths, relieving the user of the need to invoke a particular shell. ========================================================================= cl specific help: win32fe uses -nologo by default for nonverbose output. Use the flag: -logo to disable this feature. -g is identical to -Z7. -O is identical to -O2. ========================================================================= Microsoft (R) 32-bit C/C++ Optimizing Compiler Version 15.00.21022.08 for 80x86 Copyright (C) Microsoft Corporation. All rights reserved. C/C++ COMPILER OPTIONS -OPTIMIZATION- /O1 minimize space /O2 maximize speed /Ob inline expansion (default n=0) /Od disable optimizations (default) /Og enable global optimization /Oi[-] enable intrinsic functions /Os favor code space /Ot favor code speed /Ox maximum optimizations /Oy[-] enable frame pointer omission -CODE GENERATION- /GF enable read-only string pooling /Gm[-] enable minimal rebuild /Gy[-] separate functions for linker /GS[-] enable security checks /GR[-] enable C++ RTTI /GX[-] enable C++ EH (same as /EHsc) /EHs enable C++ EH (no SEH exceptions) /EHa enable C++ EH (w/ SEH exceptions) /EHc extern "C" defaults to nothrow /fp: choose floating-point model: except[-] - consider floating-point exceptions when generating code fast - "fast" floating-point model; results are less predictable precise - "precise" floating-point model; results are predictable strict - "strict" floating-point model (implies /fp:except) /Qfast_transcendentals generate inline FP intrinsics even with /fp:except /GL[-] enable link-time code generation /GA optimize for Windows Application /Ge force stack checking for all funcs /Gs[num] control stack checking calls /Gh enable _penter function call /GH enable _pexit function call /GT generate fiber-safe TLS accesses /RTC1 Enable fast checks (/RTCsu) /RTCc Convert to smaller type checks /RTCs Stack Frame runtime checking /RTCu Uninitialized local usage checks /clr[:option] compile for common language runtime, where option is: pure - produce IL-only output file (no native executable code) safe - produce IL-only verifiable output file oldSyntax - accept the Managed Extensions syntax from Visual C++ 2002/2003 initialAppDomain - enable initial AppDomain behavior of Visual C++ 2002 noAssembly - do not produce an assembly /Gd __cdecl calling convention /Gr __fastcall calling convention /Gz __stdcall calling convention /GZ Enable stack checks (/RTCs) /QIfist[-] use FIST instead of ftol() /hotpatch ensure function padding for hotpatchable images /arch: minimum CPU architecture requirements, one of: SSE - enable use of instructions available with SSE enabled CPUs SSE2 - enable use of instructions available with SSE2 enabled CPUs /Qimprecise_fwaits generate FWAITs only on "try" boundaries, not inside "try" -OUTPUT FILES- /Fa[file] name assembly listing file /FA[scu] configure assembly listing /Fd[file] name .PDB file /Fe name executable file /Fm[file] name map file /Fo name object file /Fp name precompiled header file /Fr[file] name source browser file /FR[file] name extended .SBR file /doc[file] process XML documentation comments and optionally name the .xdc file -PREPROCESSOR- /AI add to assembly search path /FU forced using assembly/module /C don't strip comments /D{=|#} define macro /E preprocess to stdout /EP preprocess to stdout, no #line /P preprocess to file /Fx merge injected code to file /FI name forced include file /U remove predefined macro /u remove all predefined macros /I add to include search path /X ignore "standard places" -LANGUAGE- /Zi enable debugging information /Z7 enable old-style debug info /Zp[n] pack structs on n-byte boundary /Za disable extensions /Ze enable extensions (default) /Zl omit default library name in .OBJ /Zg generate function prototypes /Zs syntax check only /vd{0|1|2} disable/enable vtordisp /vm type of pointers to members /Zc:arg1[,arg2] C++ language conformance, where arguments can be: forScope[-] - enforce Standard C++ for scoping rules wchar_t[-] - wchar_t is the native type, not a typedef /ZI enable Edit and Continue debug info /openmp enable OpenMP 2.0 language extensions -MISCELLANEOUS- @ options response file /?, /help print this help message /bigobj generate extended object format /c compile only, no link /errorReport:option Report internal compiler errors to Microsoft none - do not send report prompt - prompt to immediately send report queue - at next admin logon, prompt to send report (default) send - send report automatically /FC use full pathnames in diagnostics /H max external name length /J default char type is unsigned /MP[n] use up to 'n' processes for compilation /nologo suppress copyright message /showIncludes show include file names /Tc compile file as .c /Tp compile file as .cpp /TC compile all files as .c /TP compile all files as .cpp /V set version string /w disable all warnings /wd disable warning n /we treat warning n as an error /wo issue warning n once /w set warning level 1-4 for n /W set warning level (default n=1) /Wall enable all warnings /WL enable one line diagnostics /WX treat warnings as errors /Yc[file] create .PCH file /Yd put debug info in every .OBJ /Yl[sym] inject .PCH ref for debug lib /Yu[file] use .PCH file /Y- disable all PCH options /Zm max memory alloc (% of default) /Wp64 enable 64 bit porting warnings -LINKING- /LD Create .DLL /LDd Create .DLL debug library /LN Create a .netmodule /F set stack size /link [linker options and libraries] /MD link with MSVCRT.LIB /MT link with LIBCMT.LIB /MDd link with MSVCRTD.LIB debug lib /MTd link with LIBCMTD.LIB debug lib sh: win32fe cl --help Executing: win32fe cl --help sh: Win32 Development Tool Front End, version 1.10.1 Wed Oct 19 20:45:06 CDT 2011 Usage: win32fe -- - must be the first argument to win32fe : {cl,icl,df,f90,ifl,bcc32,lib,tlib} cl: Microsoft 32-bit C/C++ Optimizing Compiler icl: Intel C/C++ Optimizing Compiler df: Compaq Visual Fortran Optimizing Compiler f90: Compaq Visual Fortran90 Optimizing Compiler ifl: Intel Fortran Optimizing Compiler ifort: Intel Fortran Optimizing Compiler nvcc: NVIDIA CUDA Compiler Driver bcc32: Borland C++ for Win32 lib: Microsoft Library Manager tlib: Borland Library Manager : --help: Output this help message and help for --autodetect: Attempt automatic detection of installation --path : specifies an addition to the PATH that is required (ex. the location of a required .dll) --use : specifies the variant of to use --verbose: Echo to stdout the translated commandline and other diagnostic information --version: Output version info for win32fe and --wait_for_debugger: Inserts an infinite wait after creation of and outputs PID so one can manually attach a debugger to the current process. In the debugger, one must set: tool::waitfordebugger = 0 to continue the execution normally. --win-l: For compilers, define -lfoo to link foo.lib instead of libfoo.lib --woff: Suppress win32fe specific warning messages ================================================================================= For compilers: win32fe will map the following to their native options: -c: Compile Only, generates an object file with .o extension This will invoke the compiler once for each file listed. -l: Link the file lib.lib or if using --win-l also, .lib -o : Output= context dependent -D: Define -I: Add to the include path -L: Add to the link path -g: Generate debug symbols in objects when specified for compilation, and in executables when specified for linking (some compilers specification at both times for full debugging support). -O: Enable compiletime and/or linktime optimizations. Ex: win32fe cl -g -c foo.c --verbose -Iinclude Note: win32fe will automatically find the system library paths and system include paths, relieving the user of the need to invoke a particular shell. ========================================================================= cl specific help: win32fe uses -nologo by default for nonverbose output. Use the flag: -logo to disable this feature. -g is identical to -Z7. -O is identical to -O2. ========================================================================= Microsoft (R) 32-bit C/C++ Optimizing Compiler Version 15.00.21022.08 for 80x86 Copyright (C) Microsoft Corporation. All rights reserved. C/C++ COMPILER OPTIONS -OPTIMIZATION- /O1 minimize space /O2 maximize speed /Ob inline expansion (default n=0) /Od disable optimizations (default) /Og enable global optimization /Oi[-] enable intrinsic functions /Os favor code space /Ot favor code speed /Ox maximum optimizations /Oy[-] enable frame pointer omission -CODE GENERATION- /GF enable read-only string pooling /Gm[-] enable minimal rebuild /Gy[-] separate functions for linker /GS[-] enable security checks /GR[-] enable C++ RTTI /GX[-] enable C++ EH (same as /EHsc) /EHs enable C++ EH (no SEH exceptions) /EHa enable C++ EH (w/ SEH exceptions) /EHc extern "C" defaults to nothrow /fp: choose floating-point model: except[-] - consider floating-point exceptions when generating code fast - "fast" floating-point model; results are less predictable precise - "precise" floating-point model; results are predictable strict - "strict" floating-point model (implies /fp:except) /Qfast_transcendentals generate inline FP intrinsics even with /fp:except /GL[-] enable link-time code generation /GA optimize for Windows Application /Ge force stack checking for all funcs /Gs[num] control stack checking calls /Gh enable _penter function call /GH enable _pexit function call /GT generate fiber-safe TLS accesses /RTC1 Enable fast checks (/RTCsu) /RTCc Convert to smaller type checks /RTCs Stack Frame runtime checking /RTCu Uninitialized local usage checks /clr[:option] compile for common language runtime, where option is: pure - produce IL-only output file (no native executable code) safe - produce IL-only verifiable output file oldSyntax - accept the Managed Extensions syntax from Visual C++ 2002/2003 initialAppDomain - enable initial AppDomain behavior of Visual C++ 2002 noAssembly - do not produce an assembly /Gd __cdecl calling convention /Gr __fastcall calling convention /Gz __stdcall calling convention /GZ Enable stack checks (/RTCs) /QIfist[-] use FIST instead of ftol() /hotpatch ensure function padding for hotpatchable images /arch: minimum CPU architecture requirements, one of: SSE - enable use of instructions available with SSE enabled CPUs SSE2 - enable use of instructions available with SSE2 enabled CPUs /Qimprecise_fwaits generate FWAITs only on "try" boundaries, not inside "try" -OUTPUT FILES- /Fa[file] name assembly listing file /FA[scu] configure assembly listing /Fd[file] name .PDB file /Fe name executable file /Fm[file] name map file /Fo name object file /Fp name precompiled header file /Fr[file] name source browser file /FR[file] name extended .SBR file /doc[file] process XML documentation comments and optionally name the .xdc file -PREPROCESSOR- /AI add to assembly search path /FU forced using assembly/module /C don't strip comments /D{=|#} define macro /E preprocess to stdout /EP preprocess to stdout, no #line /P preprocess to file /Fx merge injected code to file /FI name forced include file /U remove predefined macro /u remove all predefined macros /I add to include search path /X ignore "standard places" -LANGUAGE- /Zi enable debugging information /Z7 enable old-style debug info /Zp[n] pack structs on n-byte boundary /Za disable extensions /Ze enable extensions (default) /Zl omit default library name in .OBJ /Zg generate function prototypes /Zs syntax check only /vd{0|1|2} disable/enable vtordisp /vm type of pointers to members /Zc:arg1[,arg2] C++ language conformance, where arguments can be: forScope[-] - enforce Standard C++ for scoping rules wchar_t[-] - wchar_t is the native type, not a typedef /ZI enable Edit and Continue debug info /openmp enable OpenMP 2.0 language extensions -MISCELLANEOUS- @ options response file /?, /help print this help message /bigobj generate extended object format /c compile only, no link /errorReport:option Report internal compiler errors to Microsoft none - do not send report prompt - prompt to immediately send report queue - at next admin logon, prompt to send report (default) send - send report automatically /FC use full pathnames in diagnostics /H max external name length /J default char type is unsigned /MP[n] use up to 'n' processes for compilation /nologo suppress copyright message /showIncludes show include file names /Tc compile file as .c /Tp compile file as .cpp /TC compile all files as .c /TP compile all files as .cpp /V set version string /w disable all warnings /wd disable warning n /we treat warning n as an error /wo issue warning n once /w set warning level 1-4 for n /W set warning level (default n=1) /Wall enable all warnings /WL enable one line diagnostics /WX treat warnings as errors /Yc[file] create .PCH file /Yd put debug info in every .OBJ /Yl[sym] inject .PCH ref for debug lib /Yu[file] use .PCH file /Y- disable all PCH options /Zm max memory alloc (% of default) /Wp64 enable 64 bit porting warnings -LINKING- /LD Create .DLL /LDd Create .DLL debug library /LN Create a .netmodule /F set stack size /link [linker options and libraries] /MD link with MSVCRT.LIB /MT link with LIBCMT.LIB /MDd link with MSVCRTD.LIB debug lib /MTd link with LIBCMTD.LIB debug lib Trying Cxx compiler flag -Z7 sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.cc Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.cc sh: conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Added Cxx compiler flag -Z7 Trying Cxx compiler flag -Zm200 sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -Zm200 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.cc Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -Zm200 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.cc sh: conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Added Cxx compiler flag -Zm200 Popping language Cxx ================================================================================ TEST configureDebugging from PETSc.utilities.debugging(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/PETSc/utilities/debugging.py:25) TESTING: configureDebugging from PETSc.utilities.debugging(config/PETSc/utilities/debugging.py:25) Defined "USE_ERRORCHECKING" to "1" ================================================================================ TEST configureArchitecture from PETSc.utilities.arch(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/PETSc/utilities/arch.py:32) TESTING: configureArchitecture from PETSc.utilities.arch(config/PETSc/utilities/arch.py:32) Checks PETSC_ARCH and sets if not set Defined "ARCH" to ""windows_superludist"" ================================================================================ TEST checkSharedDynamicPicOptions from PETSc.utilities.sharedLibraries(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/PETSc/utilities/sharedLibraries.py:42) TESTING: checkSharedDynamicPicOptions from PETSc.utilities.sharedLibraries(config/PETSc/utilities/sharedLibraries.py:42) ================================================================================ TEST configureSharedLibraries from PETSc.utilities.sharedLibraries(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/PETSc/utilities/sharedLibraries.py:63) TESTING: configureSharedLibraries from PETSc.utilities.sharedLibraries(config/PETSc/utilities/sharedLibraries.py:63) Checks whether shared libraries should be used, for which you must - Specify --with-shared-libraries - Have found a working shared linker Defines PETSC_USE_SHARED_LIBRARIES if they are used Defined make rule "shared_arch" with dependencies "" and code [] Defined make macro "BUILDSHAREDLIB" to "no" Defined "HAVE_SHARED_LIBRARIES" to "1" Shared libraries - disabled ================================================================================ TEST configureDynamicLibraries from PETSc.utilities.sharedLibraries(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/PETSc/utilities/sharedLibraries.py:102) TESTING: configureDynamicLibraries from PETSc.utilities.sharedLibraries(config/PETSc/utilities/sharedLibraries.py:102) Checks whether dynamic loading should be used, for which you must - Specify --with-dynamic-loading - Have found a working dynamic linker (with dlfcn.h and libdl) Defines PETSC_USE_DYNAMIC_LIBRARIES if they are used Dynamic loading - disabled ================================================================================ TEST configureBmakeDir from PETSc.utilities.bmakeDir(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/PETSc/utilities/bmakeDir.py:26) TESTING: configureBmakeDir from PETSc.utilities.bmakeDir(config/PETSc/utilities/bmakeDir.py:26) Makes $PETSC_ARCH and subdirectories if it does not exist Changed persistence directory to windows_superludist/conf sh: win32fe cl --help Executing: win32fe cl --help sh: Win32 Development Tool Front End, version 1.10.1 Wed Oct 19 20:45:06 CDT 2011 Usage: win32fe -- - must be the first argument to win32fe : {cl,icl,df,f90,ifl,bcc32,lib,tlib} cl: Microsoft 32-bit C/C++ Optimizing Compiler icl: Intel C/C++ Optimizing Compiler df: Compaq Visual Fortran Optimizing Compiler f90: Compaq Visual Fortran90 Optimizing Compiler ifl: Intel Fortran Optimizing Compiler ifort: Intel Fortran Optimizing Compiler nvcc: NVIDIA CUDA Compiler Driver bcc32: Borland C++ for Win32 lib: Microsoft Library Manager tlib: Borland Library Manager : --help: Output this help message and help for --autodetect: Attempt automatic detection of installation --path : specifies an addition to the PATH that is required (ex. the location of a required .dll) --use : specifies the variant of to use --verbose: Echo to stdout the translated commandline and other diagnostic information --version: Output version info for win32fe and --wait_for_debugger: Inserts an infinite wait after creation of and outputs PID so one can manually attach a debugger to the current process. In the debugger, one must set: tool::waitfordebugger = 0 to continue the execution normally. --win-l: For compilers, define -lfoo to link foo.lib instead of libfoo.lib --woff: Suppress win32fe specific warning messages ================================================================================= For compilers: win32fe will map the following to their native options: -c: Compile Only, generates an object file with .o extension This will invoke the compiler once for each file listed. -l: Link the file lib.lib or if using --win-l also, .lib -o : Output= context dependent -D: Define -I: Add to the include path -L: Add to the link path -g: Generate debug symbols in objects when specified for compilation, and in executables when specified for linking (some compilers specification at both times for full debugging support). -O: Enable compiletime and/or linktime optimizations. Ex: win32fe cl -g -c foo.c --verbose -Iinclude Note: win32fe will automatically find the system library paths and system include paths, relieving the user of the need to invoke a particular shell. ========================================================================= cl specific help: win32fe uses -nologo by default for nonverbose output. Use the flag: -logo to disable this feature. -g is identical to -Z7. -O is identical to -O2. ========================================================================= Microsoft (R) 32-bit C/C++ Optimizing Compiler Version 15.00.21022.08 for 80x86 Copyright (C) Microsoft Corporation. All rights reserved. C/C++ COMPILER OPTIONS -OPTIMIZATION- /O1 minimize space /O2 maximize speed /Ob inline expansion (default n=0) /Od disable optimizations (default) /Og enable global optimization /Oi[-] enable intrinsic functions /Os favor code space /Ot favor code speed /Ox maximum optimizations /Oy[-] enable frame pointer omission -CODE GENERATION- /GF enable read-only string pooling /Gm[-] enable minimal rebuild /Gy[-] separate functions for linker /GS[-] enable security checks /GR[-] enable C++ RTTI /GX[-] enable C++ EH (same as /EHsc) /EHs enable C++ EH (no SEH exceptions) /EHa enable C++ EH (w/ SEH exceptions) /EHc extern "C" defaults to nothrow /fp: choose floating-point model: except[-] - consider floating-point exceptions when generating code fast - "fast" floating-point model; results are less predictable precise - "precise" floating-point model; results are predictable strict - "strict" floating-point model (implies /fp:except) /Qfast_transcendentals generate inline FP intrinsics even with /fp:except /GL[-] enable link-time code generation /GA optimize for Windows Application /Ge force stack checking for all funcs /Gs[num] control stack checking calls /Gh enable _penter function call /GH enable _pexit function call /GT generate fiber-safe TLS accesses /RTC1 Enable fast checks (/RTCsu) /RTCc Convert to smaller type checks /RTCs Stack Frame runtime checking /RTCu Uninitialized local usage checks /clr[:option] compile for common language runtime, where option is: pure - produce IL-only output file (no native executable code) safe - produce IL-only verifiable output file oldSyntax - accept the Managed Extensions syntax from Visual C++ 2002/2003 initialAppDomain - enable initial AppDomain behavior of Visual C++ 2002 noAssembly - do not produce an assembly /Gd __cdecl calling convention /Gr __fastcall calling convention /Gz __stdcall calling convention /GZ Enable stack checks (/RTCs) /QIfist[-] use FIST instead of ftol() /hotpatch ensure function padding for hotpatchable images /arch: minimum CPU architecture requirements, one of: SSE - enable use of instructions available with SSE enabled CPUs SSE2 - enable use of instructions available with SSE2 enabled CPUs /Qimprecise_fwaits generate FWAITs only on "try" boundaries, not inside "try" -OUTPUT FILES- /Fa[file] name assembly listing file /FA[scu] configure assembly listing /Fd[file] name .PDB file /Fe name executable file /Fm[file] name map file /Fo name object file /Fp name precompiled header file /Fr[file] name source browser file /FR[file] name extended .SBR file /doc[file] process XML documentation comments and optionally name the .xdc file -PREPROCESSOR- /AI add to assembly search path /FU forced using assembly/module /C don't strip comments /D{=|#} define macro /E preprocess to stdout /EP preprocess to stdout, no #line /P preprocess to file /Fx merge injected code to file /FI name forced include file /U remove predefined macro /u remove all predefined macros /I add to include search path /X ignore "standard places" -LANGUAGE- /Zi enable debugging information /Z7 enable old-style debug info /Zp[n] pack structs on n-byte boundary /Za disable extensions /Ze enable extensions (default) /Zl omit default library name in .OBJ /Zg generate function prototypes /Zs syntax check only /vd{0|1|2} disable/enable vtordisp /vm type of pointers to members /Zc:arg1[,arg2] C++ language conformance, where arguments can be: forScope[-] - enforce Standard C++ for scoping rules wchar_t[-] - wchar_t is the native type, not a typedef /ZI enable Edit and Continue debug info /openmp enable OpenMP 2.0 language extensions -MISCELLANEOUS- @ options response file /?, /help print this help message /bigobj generate extended object format /c compile only, no link /errorReport:option Report internal compiler errors to Microsoft none - do not send report prompt - prompt to immediately send report queue - at next admin logon, prompt to send report (default) send - send report automatically /FC use full pathnames in diagnostics /H max external name length /J default char type is unsigned /MP[n] use up to 'n' processes for compilation /nologo suppress copyright message /showIncludes show include file names /Tc compile file as .c /Tp compile file as .cpp /TC compile all files as .c /TP compile all files as .cpp /V set version string /w disable all warnings /wd disable warning n /we treat warning n as an error /wo issue warning n once /w set warning level 1-4 for n /W set warning level (default n=1) /Wall enable all warnings /WL enable one line diagnostics /WX treat warnings as errors /Yc[file] create .PCH file /Yd put debug info in every .OBJ /Yl[sym] inject .PCH ref for debug lib /Yu[file] use .PCH file /Y- disable all PCH options /Zm max memory alloc (% of default) /Wp64 enable 64 bit porting warnings -LINKING- /LD Create .DLL /LDd Create .DLL debug library /LN Create a .netmodule /F set stack size /link [linker options and libraries] /MD link with MSVCRT.LIB /MT link with LIBCMT.LIB /MDd link with MSVCRTD.LIB debug lib /MTd link with LIBCMTD.LIB debug lib ================================================================================ TEST checkRestrict from config.compilers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/compilers.py:134) TESTING: checkRestrict from config.compilers(config/BuildSystem/config/compilers.py:134) Check for the C/CXX restrict keyword Pushing language C All intermediate test results are stored in /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers/conftest.c sh: conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.compilers\conftest.c(5) : error C2146: syntax error : missing ';' before identifier 'x' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.compilers\conftest.c(5) : error C2065: 'x' : undeclared identifier Possible ERROR while running compiler: conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.compilers\conftest.c(5) : error C2146: syntax error : missing ';' before identifier 'x' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.compilers\conftest.c(5) : error C2065: 'x' : undeclared identifier ret = 512 Source: #include "confdefs.h" #include "conffix.h" int main() { float * restrict x;; return 0; } sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers/conftest.c sh: conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.compilers\conftest.c(5) : error C2146: syntax error : missing ';' before identifier 'x' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.compilers\conftest.c(5) : error C2065: 'x' : undeclared identifier Possible ERROR while running compiler: conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.compilers\conftest.c(5) : error C2146: syntax error : missing ';' before identifier 'x' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.compilers\conftest.c(5) : error C2065: 'x' : undeclared identifier ret = 512 Source: #include "confdefs.h" #include "conffix.h" int main() { float * __restrict__ x;; return 0; } sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { float * __restrict x;; return 0; } compilers: Set C restrict keyword to __restrict Defined "C_RESTRICT" to "__restrict" Popping language C ================================================================================ TEST checkCFormatting from config.compilers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/compilers.py:306) TESTING: checkCFormatting from config.compilers(config/BuildSystem/config/compilers.py:306) Activate format string checking if using the GNU compilers ================================================================================ TEST checkCStaticInline from config.compilers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/compilers.py:105) TESTING: checkCStaticInline from config.compilers(config/BuildSystem/config/compilers.py:105) Check for C keyword: static inline Pushing language C sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers/conftest.c sh: conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.compilers\conftest.c(3) : error C2054: expected '(' to follow 'inline' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.compilers\conftest.c(3) : error C2085: 'foo' : not in formal parameter list C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.compilers\conftest.c(3) : error C2143: syntax error : missing ';' before '{' Possible ERROR while running compiler: conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.compilers\conftest.c(3) : error C2054: expected '(' to follow 'inline' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.compilers\conftest.c(3) : error C2085: 'foo' : not in formal parameter list C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.compilers\conftest.c(3) : error C2143: syntax error : missing ';' before '{' ret = 512 Source: #include "confdefs.h" #include "conffix.h" static inline int foo(int a) {return a;} int main() { int i = foo(1);; return 0; } sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" static __inline int foo(int a) {return a;} int main() { int i = foo(1);; return 0; } compilers: Set C StaticInline keyword to static __inline Popping language C Defined "C_STATIC_INLINE" to "static __inline" ================================================================================ TEST checkDynamicLoadFlag from config.compilers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/compilers.py:317) TESTING: checkDynamicLoadFlag from config.compilers(config/BuildSystem/config/compilers.py:317) Checks that dlopen() takes RTLD_XXX, and defines PETSC_HAVE_RTLD_XXX if it does ================================================================================ TEST checkCLibraries from config.compilers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/compilers.py:161) TESTING: checkCLibraries from config.compilers(config/BuildSystem/config/compilers.py:161) Determines the libraries needed to link with C Pushing language C sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers/conftest.exe -v -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers/conftest.exe -v -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: cl : Command line warning D9002 : ignoring unknown option '-v' Popping language C compilers: Checking arg cl compilers: Unknown arg cl compilers: Checking arg : compilers: Unknown arg : compilers: Checking arg Command compilers: Unknown arg Command compilers: Checking arg line compilers: Unknown arg line compilers: Checking arg warning compilers: Unknown arg warning compilers: Checking arg D9002 compilers: Unknown arg D9002 compilers: Checking arg : compilers: Unknown arg : compilers: Checking arg ignoring compilers: Unknown arg ignoring compilers: Checking arg unknown compilers: Unknown arg unknown compilers: Checking arg option compilers: Unknown arg option compilers: Libraries needed to link C code with another linker: [] compilers: Check that C libraries can be used from Fortran ================================================================================ TEST checkDependencyGenerationFlag from config.compilers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/compilers.py:1282) TESTING: checkDependencyGenerationFlag from config.compilers(config/BuildSystem/config/compilers.py:1282) Check if -MMD works for dependency generation, and add it if it does Pushing language C Trying C compiler flag -MMD sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe -MMD -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe -MMD -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: cl : Command line warning D9002 : ignoring unknown option '-MMD' Rejecting C linker flag -MMD due to cl : Command line warning D9002 : ignoring unknown option '-MMD' Rejected C compiler flag -MMD because linker cannot handle it Trying C compiler flag -M sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe -M -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe -M -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: cl : Command line warning D9002 : ignoring unknown option '-M' LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.setCompilers\conftest.exe not found or not built by the last incremental link; performing full link Rejecting C linker flag -M due to cl : Command line warning D9002 : ignoring unknown option '-M' LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.setCompilers\conftest.exe not found or not built by the last incremental link; performing full link Rejected C compiler flag -M because linker cannot handle it Popping language C Pushing language Cxx Trying Cxx compiler flag -MMD sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -Zm200 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.cc Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -Zm200 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.cc sh: conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language CXX Popping language CXX sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe -MMD -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -Zm200 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe -MMD -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -Zm200 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: cl : Command line warning D9002 : ignoring unknown option '-MMD' LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.setCompilers\conftest.exe not found or not built by the last incremental link; performing full link Rejecting Cxx linker flag -MMD due to cl : Command line warning D9002 : ignoring unknown option '-MMD' LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.setCompilers\conftest.exe not found or not built by the last incremental link; performing full link Rejected Cxx compiler flag -MMD because linker cannot handle it Trying Cxx compiler flag -M sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -Zm200 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.cc Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -Zm200 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.cc sh: conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language CXX Popping language CXX sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe -M -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -Zm200 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe -M -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -Zm200 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: cl : Command line warning D9002 : ignoring unknown option '-M' LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.setCompilers\conftest.exe not found or not built by the last incremental link; performing full link Rejecting Cxx linker flag -M due to cl : Command line warning D9002 : ignoring unknown option '-M' LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.setCompilers\conftest.exe not found or not built by the last incremental link; performing full link Rejected Cxx compiler flag -M because linker cannot handle it Popping language Cxx sh: win32fe cl --help Executing: win32fe cl --help sh: Win32 Development Tool Front End, version 1.10.1 Wed Oct 19 20:45:06 CDT 2011 Usage: win32fe -- - must be the first argument to win32fe : {cl,icl,df,f90,ifl,bcc32,lib,tlib} cl: Microsoft 32-bit C/C++ Optimizing Compiler icl: Intel C/C++ Optimizing Compiler df: Compaq Visual Fortran Optimizing Compiler f90: Compaq Visual Fortran90 Optimizing Compiler ifl: Intel Fortran Optimizing Compiler ifort: Intel Fortran Optimizing Compiler nvcc: NVIDIA CUDA Compiler Driver bcc32: Borland C++ for Win32 lib: Microsoft Library Manager tlib: Borland Library Manager : --help: Output this help message and help for --autodetect: Attempt automatic detection of installation --path : specifies an addition to the PATH that is required (ex. the location of a required .dll) --use : specifies the variant of to use --verbose: Echo to stdout the translated commandline and other diagnostic information --version: Output version info for win32fe and --wait_for_debugger: Inserts an infinite wait after creation of and outputs PID so one can manually attach a debugger to the current process. In the debugger, one must set: tool::waitfordebugger = 0 to continue the execution normally. --win-l: For compilers, define -lfoo to link foo.lib instead of libfoo.lib --woff: Suppress win32fe specific warning messages ================================================================================= For compilers: win32fe will map the following to their native options: -c: Compile Only, generates an object file with .o extension This will invoke the compiler once for each file listed. -l: Link the file lib.lib or if using --win-l also, .lib -o : Output= context dependent -D: Define -I: Add to the include path -L: Add to the link path -g: Generate debug symbols in objects when specified for compilation, and in executables when specified for linking (some compilers specification at both times for full debugging support). -O: Enable compiletime and/or linktime optimizations. Ex: win32fe cl -g -c foo.c --verbose -Iinclude Note: win32fe will automatically find the system library paths and system include paths, relieving the user of the need to invoke a particular shell. ========================================================================= cl specific help: win32fe uses -nologo by default for nonverbose output. Use the flag: -logo to disable this feature. -g is identical to -Z7. -O is identical to -O2. ========================================================================= Microsoft (R) 32-bit C/C++ Optimizing Compiler Version 15.00.21022.08 for 80x86 Copyright (C) Microsoft Corporation. All rights reserved. C/C++ COMPILER OPTIONS -OPTIMIZATION- /O1 minimize space /O2 maximize speed /Ob inline expansion (default n=0) /Od disable optimizations (default) /Og enable global optimization /Oi[-] enable intrinsic functions /Os favor code space /Ot favor code speed /Ox maximum optimizations /Oy[-] enable frame pointer omission -CODE GENERATION- /GF enable read-only string pooling /Gm[-] enable minimal rebuild /Gy[-] separate functions for linker /GS[-] enable security checks /GR[-] enable C++ RTTI /GX[-] enable C++ EH (same as /EHsc) /EHs enable C++ EH (no SEH exceptions) /EHa enable C++ EH (w/ SEH exceptions) /EHc extern "C" defaults to nothrow /fp: choose floating-point model: except[-] - consider floating-point exceptions when generating code fast - "fast" floating-point model; results are less predictable precise - "precise" floating-point model; results are predictable strict - "strict" floating-point model (implies /fp:except) /Qfast_transcendentals generate inline FP intrinsics even with /fp:except /GL[-] enable link-time code generation /GA optimize for Windows Application /Ge force stack checking for all funcs /Gs[num] control stack checking calls /Gh enable _penter function call /GH enable _pexit function call /GT generate fiber-safe TLS accesses /RTC1 Enable fast checks (/RTCsu) /RTCc Convert to smaller type checks /RTCs Stack Frame runtime checking /RTCu Uninitialized local usage checks /clr[:option] compile for common language runtime, where option is: pure - produce IL-only output file (no native executable code) safe - produce IL-only verifiable output file oldSyntax - accept the Managed Extensions syntax from Visual C++ 2002/2003 initialAppDomain - enable initial AppDomain behavior of Visual C++ 2002 noAssembly - do not produce an assembly /Gd __cdecl calling convention /Gr __fastcall calling convention /Gz __stdcall calling convention /GZ Enable stack checks (/RTCs) /QIfist[-] use FIST instead of ftol() /hotpatch ensure function padding for hotpatchable images /arch: minimum CPU architecture requirements, one of: SSE - enable use of instructions available with SSE enabled CPUs SSE2 - enable use of instructions available with SSE2 enabled CPUs /Qimprecise_fwaits generate FWAITs only on "try" boundaries, not inside "try" -OUTPUT FILES- /Fa[file] name assembly listing file /FA[scu] configure assembly listing /Fd[file] name .PDB file /Fe name executable file /Fm[file] name map file /Fo name object file /Fp name precompiled header file /Fr[file] name source browser file /FR[file] name extended .SBR file /doc[file] process XML documentation comments and optionally name the .xdc file -PREPROCESSOR- /AI add to assembly search path /FU forced using assembly/module /C don't strip comments /D{=|#} define macro /E preprocess to stdout /EP preprocess to stdout, no #line /P preprocess to file /Fx merge injected code to file /FI name forced include file /U remove predefined macro /u remove all predefined macros /I add to include search path /X ignore "standard places" -LANGUAGE- /Zi enable debugging information /Z7 enable old-style debug info /Zp[n] pack structs on n-byte boundary /Za disable extensions /Ze enable extensions (default) /Zl omit default library name in .OBJ /Zg generate function prototypes /Zs syntax check only /vd{0|1|2} disable/enable vtordisp /vm type of pointers to members /Zc:arg1[,arg2] C++ language conformance, where arguments can be: forScope[-] - enforce Standard C++ for scoping rules wchar_t[-] - wchar_t is the native type, not a typedef /ZI enable Edit and Continue debug info /openmp enable OpenMP 2.0 language extensions -MISCELLANEOUS- @ options response file /?, /help print this help message /bigobj generate extended object format /c compile only, no link /errorReport:option Report internal compiler errors to Microsoft none - do not send report prompt - prompt to immediately send report queue - at next admin logon, prompt to send report (default) send - send report automatically /FC use full pathnames in diagnostics /H max external name length /J default char type is unsigned /MP[n] use up to 'n' processes for compilation /nologo suppress copyright message /showIncludes show include file names /Tc compile file as .c /Tp compile file as .cpp /TC compile all files as .c /TP compile all files as .cpp /V set version string /w disable all warnings /wd disable warning n /we treat warning n as an error /wo issue warning n once /w set warning level 1-4 for n /W set warning level (default n=1) /Wall enable all warnings /WL enable one line diagnostics /WX treat warnings as errors /Yc[file] create .PCH file /Yd put debug info in every .OBJ /Yl[sym] inject .PCH ref for debug lib /Yu[file] use .PCH file /Y- disable all PCH options /Zm max memory alloc (% of default) /Wp64 enable 64 bit porting warnings -LINKING- /LD Create .DLL /LDd Create .DLL debug library /LN Create a .netmodule /F set stack size /link [linker options and libraries] /MD link with MSVCRT.LIB /MT link with LIBCMT.LIB /MDd link with MSVCRTD.LIB debug lib /MTd link with LIBCMTD.LIB debug lib ================================================================================ TEST checkRestrict from config.compilers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/compilers.py:134) TESTING: checkRestrict from config.compilers(config/BuildSystem/config/compilers.py:134) Check for the C/CXX restrict keyword Pushing language Cxx sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -Zm200 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers/conftest.cc Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -Zm200 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers/conftest.cc sh: conftest.cc C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.compilers\conftest.cc(5) : error C2146: syntax error : missing ';' before identifier 'x' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.compilers\conftest.cc(5) : error C2065: 'x' : undeclared identifier Possible ERROR while running compiler: conftest.cc C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.compilers\conftest.cc(5) : error C2146: syntax error : missing ';' before identifier 'x' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.compilers\conftest.cc(5) : error C2065: 'x' : undeclared identifier ret = 512 Source: #include "confdefs.h" #include "conffix.h" int main() { float * restrict x;; return 0; } sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -Zm200 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers/conftest.cc Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -Zm200 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers/conftest.cc sh: conftest.cc C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.compilers\conftest.cc(5) : error C2146: syntax error : missing ';' before identifier 'x' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.compilers\conftest.cc(5) : error C2065: 'x' : undeclared identifier Possible ERROR while running compiler: conftest.cc C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.compilers\conftest.cc(5) : error C2146: syntax error : missing ';' before identifier 'x' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.compilers\conftest.cc(5) : error C2065: 'x' : undeclared identifier ret = 512 Source: #include "confdefs.h" #include "conffix.h" int main() { float * __restrict__ x;; return 0; } sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -Zm200 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers/conftest.cc Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -Zm200 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers/conftest.cc sh: conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { float * __restrict x;; return 0; } compilers: Set Cxx restrict keyword to __restrict Defined "CXX_RESTRICT" to "__restrict" Popping language Cxx ================================================================================ TEST checkCxxNamespace from config.compilers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/compilers.py:355) TESTING: checkCxxNamespace from config.compilers(config/BuildSystem/config/compilers.py:355) Checks that C++ compiler supports namespaces, and if it does defines HAVE_CXX_NAMESPACE Pushing language Cxx sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -Zm200 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers/conftest.cc Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -Zm200 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers/conftest.cc sh: conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" namespace petsc {int dummy;} int main() { ; return 0; } sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -Zm200 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers/conftest.cc Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -Zm200 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers/conftest.cc sh: conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" template struct a {}; namespace trouble{ template struct a : public ::a {}; } trouble::a uugh; int main() { ; return 0; } Popping language Cxx compilers: C++ has namespaces Defined "HAVE_CXX_NAMESPACE" to "1" ================================================================================ TEST checkCxxOptionalExtensions from config.compilers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/compilers.py:330) TESTING: checkCxxOptionalExtensions from config.compilers(config/BuildSystem/config/compilers.py:330) Check whether the C++ compiler (IBM xlC, OSF5) need special flag for .c files which contain C++ Pushing language Cxx sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -Zm200 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -Zm200 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.c sh: conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.setCompilers\conftest.c(5) : error C2065: 'class' : undeclared identifier C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.setCompilers\conftest.c(5) : error C2146: syntax error : missing ';' before identifier 'somename' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.setCompilers\conftest.c(5) : error C2065: 'somename' : undeclared identifier C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.setCompilers\conftest.c(5) : error C2143: syntax error : missing ';' before '{' Possible ERROR while running compiler: conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.setCompilers\conftest.c(5) : error C2065: 'class' : undeclared identifier C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.setCompilers\conftest.c(5) : error C2146: syntax error : missing ';' before identifier 'somename' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.setCompilers\conftest.c(5) : error C2065: 'somename' : undeclared identifier C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.setCompilers\conftest.c(5) : error C2143: syntax error : missing ';' before '{' ret = 512 Source: #include "confdefs.h" #include "conffix.h" int main() { class somename { int i; };; return 0; } Rejecting compiler flag due to nonzero status from link Rejecting compiler flag due to conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.setCompilers\conftest.c(5) : error C2065: 'class' : undeclared identifier C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.setCompilers\conftest.c(5) : error C2146: syntax error : missing ';' before identifier 'somename' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.setCompilers\conftest.c(5) : error C2065: 'somename' : undeclared identifier C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.setCompilers\conftest.c(5) : error C2143: syntax error : missing ';' before '{' PETSc Error: No output file produced sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -Zm200 -+ /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -Zm200 -+ /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.c sh: cl : Command line warning D9002 : ignoring unknown option '-+' conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.setCompilers\conftest.c(5) : error C2065: 'class' : undeclared identifier C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.setCompilers\conftest.c(5) : error C2146: syntax error : missing ';' before identifier 'somename' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.setCompilers\conftest.c(5) : error C2065: 'somename' : undeclared identifier C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.setCompilers\conftest.c(5) : error C2143: syntax error : missing ';' before '{' Possible ERROR while running compiler: cl : Command line warning D9002 : ignoring unknown option '-+' conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.setCompilers\conftest.c(5) : error C2065: 'class' : undeclared identifier C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.setCompilers\conftest.c(5) : error C2146: syntax error : missing ';' before identifier 'somename' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.setCompilers\conftest.c(5) : error C2065: 'somename' : undeclared identifier C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.setCompilers\conftest.c(5) : error C2143: syntax error : missing ';' before '{' ret = 512 Source: #include "confdefs.h" #include "conffix.h" int main() { class somename { int i; };; return 0; } Rejecting compiler flag -+ due to nonzero status from link Rejecting compiler flag -+ due to cl : Command line warning D9002 : ignoring unknown option '-+' conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.setCompilers\conftest.c(5) : error C2065: 'class' : undeclared identifier C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.setCompilers\conftest.c(5) : error C2146: syntax error : missing ';' before identifier 'somename' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.setCompilers\conftest.c(5) : error C2065: 'somename' : undeclared identifier C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.setCompilers\conftest.c(5) : error C2143: syntax error : missing ';' before '{' PETSc Error: No output file produced sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -Zm200 -x cxx -tlocal /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -Zm200 -x cxx -tlocal /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.c sh: Error: win32fe: Input File Not Found: C:\cygwin\packages\petsc-3.4.5\cxx Possible ERROR while running compiler: Error: win32fe: Input File Not Found: C:\cygwin\packages\petsc-3.4.5\cxx ret = 32512 Source: #include "confdefs.h" #include "conffix.h" int main() { class somename { int i; };; return 0; } Rejecting compiler flag -x cxx -tlocal due to nonzero status from link Rejecting compiler flag -x cxx -tlocal due to Error: win32fe: Input File Not Found: C:\cygwin\packages\petsc-3.4.5\cxx PETSc Error: No output file produced sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -Zm200 -Kc++ /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -Zm200 -Kc++ /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.c sh: cl : Command line warning D9002 : ignoring unknown option '-Kc++' conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.setCompilers\conftest.c(5) : error C2065: 'class' : undeclared identifier C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.setCompilers\conftest.c(5) : error C2146: syntax error : missing ';' before identifier 'somename' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.setCompilers\conftest.c(5) : error C2065: 'somename' : undeclared identifier C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.setCompilers\conftest.c(5) : error C2143: syntax error : missing ';' before '{' Possible ERROR while running compiler: cl : Command line warning D9002 : ignoring unknown option '-Kc++' conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.setCompilers\conftest.c(5) : error C2065: 'class' : undeclared identifier C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.setCompilers\conftest.c(5) : error C2146: syntax error : missing ';' before identifier 'somename' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.setCompilers\conftest.c(5) : error C2065: 'somename' : undeclared identifier C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.setCompilers\conftest.c(5) : error C2143: syntax error : missing ';' before '{' ret = 512 Source: #include "confdefs.h" #include "conffix.h" int main() { class somename { int i; };; return 0; } Rejecting compiler flag -Kc++ due to nonzero status from link Rejecting compiler flag -Kc++ due to cl : Command line warning D9002 : ignoring unknown option '-Kc++' conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.setCompilers\conftest.c(5) : error C2065: 'class' : undeclared identifier C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.setCompilers\conftest.c(5) : error C2146: syntax error : missing ';' before identifier 'somename' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.setCompilers\conftest.c(5) : error C2065: 'somename' : undeclared identifier C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.setCompilers\conftest.c(5) : error C2143: syntax error : missing ';' before '{' PETSc Error: No output file produced sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -Zm200 -TP /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -Zm200 -TP /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { class somename { int i; };; return 0; } Added Cxx compiler flag -TP Popping language Cxx ================================================================================ TEST checkCxxStaticInline from config.compilers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/compilers.py:119) TESTING: checkCxxStaticInline from config.compilers(config/BuildSystem/config/compilers.py:119) Check for C++ keyword: static inline Pushing language Cxx sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -Zm200 -TP /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers/conftest.cc Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -Zm200 -TP /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers/conftest.cc sh: conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" static inline int foo(int a) {return a;} int main() { int i = foo(1);; return 0; } compilers: Set Cxx StaticInline keyword to static inline Popping language Cxx Defined "CXX_STATIC_INLINE" to "static inline" ================================================================================ TEST checkCxxLibraries from config.compilers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/compilers.py:370) TESTING: checkCxxLibraries from config.compilers(config/BuildSystem/config/compilers.py:370) Determines the libraries needed to link with C++ Pushing language Cxx sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -Zm200 -TP /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers/conftest.cc Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -Zm200 -TP /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers/conftest.cc sh: conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language CXX Popping language CXX sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers/conftest.exe -v -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -Zm200 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers/conftest.exe -v -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -Zm200 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: cl : Command line warning D9002 : ignoring unknown option '-v' LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.compilers\conftest.exe not found or not built by the last incremental link; performing full link Popping language Cxx compilers: Checking arg cl compilers: Unknown arg cl compilers: Checking arg : compilers: Unknown arg : compilers: Checking arg Command compilers: Unknown arg Command compilers: Checking arg line compilers: Unknown arg line compilers: Checking arg warning compilers: Unknown arg warning compilers: Checking arg D9002 compilers: Unknown arg D9002 compilers: Checking arg : compilers: Unknown arg : compilers: Checking arg ignoring compilers: Unknown arg ignoring compilers: Checking arg unknown compilers: Unknown arg unknown compilers: Checking arg option compilers: Unknown arg option compilers: Checking arg LINK compilers: Unknown arg LINK compilers: Checking arg : compilers: Unknown arg : compilers: Checking arg C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.compilers\conftest.exe compilers: Unknown arg C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.compilers\conftest.exe compilers: Checking arg not compilers: Unknown arg not compilers: Checking arg found compilers: Unknown arg found compilers: Checking arg or compilers: Unknown arg or compilers: Checking arg not compilers: Unknown arg not compilers: Checking arg built compilers: Unknown arg built compilers: Checking arg by compilers: Unknown arg by compilers: Checking arg the compilers: Unknown arg the compilers: Checking arg last compilers: Unknown arg last compilers: Checking arg incremental compilers: Unknown arg incremental compilers: Checking arg link; compilers: Unknown arg link; compilers: Checking arg performing compilers: Unknown arg performing compilers: Checking arg full compilers: Unknown arg full compilers: Checking arg link compilers: Unknown arg link compilers: Libraries needed to link Cxx code with another linker: [] compilers: Check that Cxx libraries can be used from C Pushing language C sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.setCompilers\conftest.exe not found or not built by the last incremental link; performing full link sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.setCompilers\conftest.exe not found or not built by the last incremental link; performing full link Executing: /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe sh: /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe Executing: /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers/conftest.exe sh: Popping language C ================================================================================ TEST setupFrameworkCompilers from config.compilers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/compilers.py:1364) TESTING: setupFrameworkCompilers from config.compilers(config/BuildSystem/config/compilers.py:1364) ================================================================================ TEST configureFortranCPP from PETSc.utilities.fortranCPP(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/PETSc/utilities/fortranCPP.py:27) TESTING: configureFortranCPP from PETSc.utilities.fortranCPP(config/PETSc/utilities/fortranCPP.py:27) Handle case where Fortran cannot preprocess properly Defined make rule ".F.o" with dependencies "" and code ['-@echo "Your system was not configured for Fortran use"', '-@echo " Check configure.log under the checkFortranCompiler test for the specific failure"', '-@echo " You can reconfigure using --with-fc= to enable Fortran"'] ================================================================================ TEST checkStdC from config.headers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/headers.py:105) TESTING: checkStdC from config.headers(config/BuildSystem/config/headers.py:105) sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #include #include int main() { ; return 0; } sh: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c Executing: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c sh: conftest.c #line 1 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 7 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 11 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 15 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 19 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 23 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 27 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 31 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 35 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 39 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 43 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 47 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 49 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 2 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 8 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 9 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 10 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 3 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\string.h" #pragma once #line 18 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\string.h" #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 22 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 23 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 38 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 42 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 65 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 67 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #pragma once #line 112 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 117 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 122 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 123 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 145 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 149 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" sh: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c Executing: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c sh: conftest.c #line 1 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 7 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 11 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 15 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 19 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 23 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 27 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 31 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 35 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 39 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 43 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 47 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 49 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 2 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 8 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 9 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 10 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 3 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\stdlib.h" #pragma once #line 19 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\stdlib.h" #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 22 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 23 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 38 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 42 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 65 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 67 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #pragma once #line 112 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 117 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 122 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 123 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 145 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 149 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #define ISLOWER(c) ('a' <= (c) && (c) <= 'z') #define TOUPPER(c) (ISLOWER(c) ? 'A' + ((c) - 'a') : (c)) #define XOR(e, f) (((e) && !(f)) || (!(e) && (f))) int main() { int i; for(i = 0; i < 256; i++) if (XOR(islower(i), ISLOWER(i)) || toupper(i) != TOUPPER(i)) exit(2); exit(0); ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: Executing: /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.exe sh: /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.exe Executing: /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.exe sh: Defined "STDC_HEADERS" to "1" ================================================================================ TEST checkStat from config.headers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/headers.py:138) TESTING: checkStat from config.headers(config/BuildSystem/config/headers.py:138) Checks whether stat file-mode macros are broken, and defines STAT_MACROS_BROKEN if they are sh: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c Executing: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c sh: conftest.c #line 1 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 7 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 11 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 15 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 19 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 23 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 27 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 31 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 35 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 39 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 43 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 47 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 51 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 53 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 2 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 8 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 9 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 10 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 3 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sys/types.h" #pragma once #line 18 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sys/types.h" #line 25 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sys/types.h" #line 33 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sys/types.h" #line 34 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sys/types.h" typedef __w64 long __time32_t; #line 47 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sys/types.h" typedef __int64 __time64_t; #line 52 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sys/types.h" typedef __time64_t time_t; #line 59 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sys/types.h" #line 61 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sys/types.h" typedef unsigned short _ino_t; typedef unsigned short ino_t; #line 71 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sys/types.h" #line 74 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sys/types.h" typedef unsigned int _dev_t; typedef unsigned int dev_t; #line 84 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sys/types.h" #line 87 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sys/types.h" typedef long _off_t; typedef long off_t; #line 97 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sys/types.h" #line 100 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sys/types.h" #line 102 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sys/types.h" #line 5 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sys/stat.h" #pragma once #line 18 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sys/stat.h" #line 25 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sys/stat.h" #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 22 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 23 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 38 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 42 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 65 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 67 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #pragma once #line 112 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 117 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 122 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 123 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 145 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 149 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" ================================================================================ TEST checkSysWait from config.headers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/headers.py:173) TESTING: checkSysWait from config.headers(config/BuildSystem/config/headers.py:173) Check for POSIX.1 compatible sys/wait.h, and defines HAVE_SYS_WAIT_H if found sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c sh: conftest.c C:\cygwin\usr\include\sys/time.h(19) : error C2061: syntax error : identifier 'suseconds_t' C:\cygwin\usr\include\sys/time.h(20) : error C2059: syntax error : '}' C:\cygwin\usr\include\sys/time.h(69) : error C2079: 'it_interval' uses undefined struct 'timeval' C:\cygwin\usr\include\sys/time.h(70) : error C2079: 'it_value' uses undefined struct 'timeval' C:\cygwin\usr\include\sys/resource.h(52) : error C2079: 'ru_utime' uses undefined struct 'timeval' C:\cygwin\usr\include\sys/resource.h(53) : error C2079: 'ru_stime' uses undefined struct 'timeval' C:\cygwin\usr\include\sys/resource.h(76) : error C2146: syntax error : missing ')' before identifier 'who' C:\cygwin\usr\include\sys/resource.h(76) : error C2081: 'id_t' : name in formal parameter list illegal C:\cygwin\usr\include\sys/resource.h(76) : error C2061: syntax error : identifier 'who' C:\cygwin\usr\include\sys/resource.h(76) : error C2059: syntax error : ';' C:\cygwin\usr\include\sys/resource.h(76) : error C2059: syntax error : ')' C:\cygwin\usr\include\sys/resource.h(77) : error C2146: syntax error : missing ')' before identifier 'who' C:\cygwin\usr\include\sys/resource.h(77) : error C2081: 'id_t' : name in formal parameter list illegal C:\cygwin\usr\include\sys/resource.h(77) : error C2061: syntax error : identifier 'who' C:\cygwin\usr\include\sys/resource.h(77) : error C2059: syntax error : ';' C:\cygwin\usr\include\sys/resource.h(77) : error C2059: syntax error : ',' C:\cygwin\usr\include\sys/resource.h(77) : error C2059: syntax error : ')' C:\cygwin\usr\include\sys/wait.h(39) : error C2061: syntax error : identifier '__attribute__' C:\cygwin\usr\include\sys/wait.h(39) : error C2059: syntax error : ';' C:\cygwin\usr\include\sys/wait.h(43) : error C2061: syntax error : identifier 'wait' C:\cygwin\usr\include\sys/wait.h(43) : error C2059: syntax error : ';' C:\cygwin\usr\include\sys/wait.h(43) : error C2146: syntax error : missing ')' before identifier '__status' C:\cygwin\usr\include\sys/wait.h(43) : error C2061: syntax error : identifier '__status' C:\cygwin\usr\include\sys/wait.h(43) : error C2059: syntax error : ')' C:\cygwin\usr\include\sys/wait.h(44) : error C2061: syntax error : identifier 'waitpid' C:\cygwin\usr\include\sys/wait.h(44) : error C2059: syntax error : ';' C:\cygwin\usr\include\sys/wait.h(44) : error C2146: syntax error : missing ')' before identifier '__pid' C:\cygwin\usr\include\sys/wait.h(44) : error C2061: syntax error : identifier '__pid' C:\cygwin\usr\include\sys/wait.h(44) : error C2059: syntax error : ',' C:\cygwin\usr\include\sys/wait.h(44) : error C2059: syntax error : ')' C:\cygwin\usr\include\sys/wait.h(45) : error C2061: syntax error : identifier 'wait3' C:\cygwin\usr\include\sys/wait.h(45) : error C2059: syntax error : ';' C:\cygwin\usr\include\sys/wait.h(45) : error C2146: syntax error : missing ')' before identifier '__status' C:\cygwin\usr\include\sys/wait.h(45) : error C2061: syntax error : identifier '__status' C:\cygwin\usr\include\sys/wait.h(45) : error C2059: syntax error : ',' C:\cygwin\usr\include\sys/wait.h(45) : error C2059: syntax error : ')' C:\cygwin\usr\include\sys/wait.h(46) : error C2061: syntax error : identifier 'wait4' C:\cygwin\usr\include\sys/wait.h(46) : error C2059: syntax error : ';' C:\cygwin\usr\include\sys/wait.h(46) : error C2146: syntax error : missing ')' before identifier '__pid' C:\cygwin\usr\include\sys/wait.h(46) : error C2061: syntax error : identifier '__pid' C:\cygwin\usr\include\sys/wait.h(46) : error C2059: syntax error : ',' C:\cygwin\usr\include\sys/wait.h(46) : error C2059: syntax error : ')' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.headers\conftest.c(17) : warning C4116: unnamed type definition in parentheses C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.headers\conftest.c(17) : error C2016: C requires that a struct or union has at least one member C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.headers\conftest.c(17) : error C2061: syntax error : identifier '__typeof' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.headers\conftest.c(17) : error C2143: syntax error : missing ';' before 'type' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.headers\conftest.c(17) : error C2059: syntax error : ')' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.headers\conftest.c(17) : error C2449: found '{' at file scope (missing function header?) C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.headers\conftest.c(17) : error C2059: syntax error : '}' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.headers\conftest.c(17) : error C2059: syntax error : ')' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.headers\conftest.c(17) : error C2059: syntax error : ')' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.headers\conftest.c(17) : error C2059: syntax error : ')' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.headers\conftest.c(17) : error C2059: syntax error : ')' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.headers\conftest.c(17) : warning C4116: unnamed type definition in parentheses C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.headers\conftest.c(17) : error C2059: syntax error : ')' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.headers\conftest.c(17) : error C2449: found '{' at file scope (missing function header?) C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.headers\conftest.c(17) : error C2059: syntax error : '}' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.headers\conftest.c(17) : error C2059: syntax error : ')' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.headers\conftest.c(17) : error C2059: syntax error : ')' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.headers\conftest.c(17) : error C2059: syntax error : ')' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.headers\conftest.c(17) : error C2059: syntax error : ')' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.headers\conftest.c(19) : error C2059: syntax error : 'return' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.headers\conftest.c(20) : error C2059: syntax error : '}' Possible ERROR while running compiler: conftest.c C:\cygwin\usr\include\sys/time.h(19) : error C2061: syntax error : identifier 'suseconds_t' C:\cygwin\usr\include\sys/time.h(20) : error C2059: syntax error : '}' C:\cygwin\usr\include\sys/time.h(69) : error C2079: 'it_interval' uses undefined struct 'timeval' C:\cygwin\usr\include\sys/time.h(70) : error C2079: 'it_value' uses undefined struct 'timeval' C:\cygwin\usr\include\sys/resource.h(52) : error C2079: 'ru_utime' uses undefined struct 'timeval' C:\cygwin\usr\include\sys/resource.h(53) : error C2079: 'ru_stime' uses undefined struct 'timeval' C:\cygwin\usr\include\sys/resource.h(76) : error C2146: syntax error : missing ')' before identifier 'who' C:\cygwin\usr\include\sys/resource.h(76) : error C2081: 'id_t' : name in formal parameter list illegal C:\cygwin\usr\include\sys/resource.h(76) : error C2061: syntax error : identifier 'who' C:\cygwin\usr\include\sys/resource.h(76) : error C2059: syntax error : ';' C:\cygwin\usr\include\sys/resource.h(76) : error C2059: syntax error : ')' C:\cygwin\usr\include\sys/resource.h(77) : error C2146: syntax error : missing ')' before identifier 'who' C:\cygwin\usr\include\sys/resource.h(77) : error C2081: 'id_t' : name in formal parameter list illegal C:\cygwin\usr\include\sys/resource.h(77) : error C2061: syntax error : identifier 'who' C:\cygwin\usr\include\sys/resource.h(77) : error C2059: syntax error : ';' C:\cygwin\usr\include\sys/resource.h(77) : error C2059: syntax error : ',' C:\cygwin\usr\include\sys/resource.h(77) : error C2059: syntax error : ')' C:\cygwin\usr\include\sys/wait.h(39) : error C2061: syntax error : identifier '__attribute__' C:\cygwin\usr\include\sys/wait.h(39) : error C2059: syntax error : ';' C:\cygwin\usr\include\sys/wait.h(43) : error C2061: syntax error : identifier 'wait' C:\cygwin\usr\include\sys/wait.h(43) : error C2059: syntax error : ';' C:\cygwin\usr\include\sys/wait.h(43) : error C2146: syntax error : missing ')' before identifier '__status' C:\cygwin\usr\include\sys/wait.h(43) : error C2061: syntax error : identifier '__status' C:\cygwin\usr\include\sys/wait.h(43) : error C2059: syntax error : ')' C:\cygwin\usr\include\sys/wait.h(44) : error C2061: syntax error : identifier 'waitpid' C:\cygwin\usr\include\sys/wait.h(44) : error C2059: syntax error : ';' C:\cygwin\usr\include\sys/wait.h(44) : error C2146: syntax error : missing ')' before identifier '__pid' C:\cygwin\usr\include\sys/wait.h(44) : error C2061: syntax error : identifier '__pid' C:\cygwin\usr\include\sys/wait.h(44) : error C2059: syntax error : ',' C:\cygwin\usr\include\sys/wait.h(44) : error C2059: syntax error : ')' C:\cygwin\usr\include\sys/wait.h(45) : error C2061: syntax error : identifier 'wait3' C:\cygwin\usr\include\sys/wait.h(45) : error C2059: syntax error : ';' C:\cygwin\usr\include\sys/wait.h(45) : error C2146: syntax error : missing ')' before identifier '__status' C:\cygwin\usr\include\sys/wait.h(45) : error C2061: syntax error : identifier '__status' C:\cygwin\usr\include\sys/wait.h(45) : error C2059: syntax error : ',' C:\cygwin\usr\include\sys/wait.h(45) : error C2059: syntax error : ')' C:\cygwin\usr\include\sys/wait.h(46) : error C2061: syntax error : identifier 'wait4' C:\cygwin\usr\include\sys/wait.h(46) : error C2059: syntax error : ';' C:\cygwin\usr\include\sys/wait.h(46) : error C2146: syntax error : missing ')' before identifier '__pid' C:\cygwin\usr\include\sys/wait.h(46) : error C2061: syntax error : identifier '__pid' C:\cygwin\usr\include\sys/wait.h(46) : error C2059: syntax error : ',' C:\cygwin\usr\include\sys/wait.h(46) : error C2059: syntax error : ')' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.headers\conftest.c(17) : warning C4116: unnamed type definition in parentheses C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.headers\conftest.c(17) : error C2016: C requires that a struct or union has at least one member C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.headers\conftest.c(17) : error C2061: syntax error : identifier '__typeof' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.headers\conftest.c(17) : error C2143: syntax error : missing ';' before 'type' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.headers\conftest.c(17) : error C2059: syntax error : ')' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.headers\conftest.c(17) : error C2449: found '{' at file scope (missing function header?) C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.headers\conftest.c(17) : error C2059: syntax error : '}' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.headers\conftest.c(17) : error C2059: syntax error : ')' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.headers\conftest.c(17) : error C2059: syntax error : ')' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.headers\conftest.c(17) : error C2059: syntax error : ')' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.headers\conftest.c(17) : error C2059: syntax error : ')' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.headers\conftest.c(17) : warning C4116: unnamed type definition in parentheses C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.headers\conftest.c(17) : error C2059: syntax error : ')' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.headers\conftest.c(17) : error C2449: found '{' at file scope (missing function header?) C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.headers\conftest.c(17) : error C2059: syntax error : '}' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.headers\conftest.c(17) : error C2059: syntax error : ')' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.headers\conftest.c(17) : error C2059: syntax error : ')' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.headers\conftest.c(17) : error C2059: syntax error : ')' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.headers\conftest.c(17) : error C2059: syntax error : ')' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.headers\conftest.c(19) : error C2059: syntax error : 'return' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.headers\conftest.c(20) : error C2059: syntax error : '}' ret = 512 Source: #include "confdefs.h" #include "conffix.h" #include #include #ifndef WEXITSTATUS #define WEXITSTATUS(stat_val) ((unsigned)(stat_val) >> 8) #endif #ifndef WIFEXITED #define WIFEXITED(stat_val) (((stat_val) & 255) == 0) #endif int main() { int s; wait (&s); s = WIFEXITED (s) ? WEXITSTATUS (s) : 1; ; return 0; } ================================================================================ TEST checkTime from config.headers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/headers.py:195) TESTING: checkTime from config.headers(config/BuildSystem/config/headers.py:195) Checks if you can safely include both and , and if so defines TIME_WITH_SYS_TIME Checking for header: time.h sh: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c Executing: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c sh: conftest.c #line 1 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 7 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 11 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 15 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 19 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 23 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 27 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 31 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 35 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 39 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 43 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 47 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 51 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 53 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 2 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 8 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 9 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 10 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 3 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\time.h" #pragma once #line 19 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\time.h" #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 22 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 23 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 38 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 42 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 65 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 67 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #pragma once #line 112 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 117 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 122 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 123 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 145 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 149 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" Defined "HAVE_TIME_H" to "1" Checking for header: sys/time.h sh: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c Executing: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c sh: conftest.c #line 1 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 7 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 11 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 15 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 19 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 23 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 27 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 31 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 35 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 39 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 43 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 47 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 51 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 55 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 57 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 2 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 8 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 9 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 10 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 3 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.headers\conftest.c(3) : fatal error C1083: Cannot open include file: 'sys/time.h': No such file or directory Possible ERROR while running preprocessor: ret = 512 Source: #include "confdefs.h" #include "conffix.h" #include sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c sh: conftest.c C:\cygwin\usr\include\sys/time.h(19) : error C2061: syntax error : identifier 'suseconds_t' C:\cygwin\usr\include\sys/time.h(20) : error C2059: syntax error : '}' C:\cygwin\usr\include\sys/time.h(69) : error C2079: 'it_interval' uses undefined struct 'timeval' C:\cygwin\usr\include\sys/time.h(70) : error C2079: 'it_value' uses undefined struct 'timeval' Possible ERROR while running compiler: conftest.c C:\cygwin\usr\include\sys/time.h(19) : error C2061: syntax error : identifier 'suseconds_t' C:\cygwin\usr\include\sys/time.h(20) : error C2059: syntax error : '}' C:\cygwin\usr\include\sys/time.h(69) : error C2079: 'it_interval' uses undefined struct 'timeval' C:\cygwin\usr\include\sys/time.h(70) : error C2079: 'it_value' uses undefined struct 'timeval' ret = 512 Source: #include "confdefs.h" #include "conffix.h" #include #include #include int main() { struct tm *tp = 0; if (tp); ; return 0; } ================================================================================ TEST checkMath from config.headers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/headers.py:203) TESTING: checkMath from config.headers(config/BuildSystem/config/headers.py:203) Checks for the math headers and defines Checking for header: math.h sh: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c Executing: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c sh: conftest.c #line 1 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 7 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 11 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 15 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 19 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 23 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 27 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 31 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 35 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 39 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 43 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 47 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 51 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 55 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 57 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 2 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 8 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 9 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 10 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 3 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\math.h" #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 22 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 23 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 38 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 42 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 65 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 67 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #pragma once #line 112 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 117 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 122 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 123 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 145 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 149 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" Defined "HAVE_MATH_H" to "1" sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c sh: conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.headers\conftest.c(6) : error C2065: 'M_PI' : undeclared identifier Possible ERROR while running compiler: conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.headers\conftest.c(6) : error C2065: 'M_PI' : undeclared identifier ret = 512 Source: #include "confdefs.h" #include "conffix.h" #include int main() { double pi = M_PI; if (pi); ; return 0; } sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #define _USE_MATH_DEFINES 1 #include int main() { double pi = M_PI; if (pi); ; return 0; } Defined "_USE_MATH_DEFINES" to "1" Activated Windows math #defines, like M_PI ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/socket.h sh: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c Executing: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c sh: conftest.c #line 1 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 7 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 11 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 15 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 19 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 23 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 27 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 31 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 35 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 39 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 43 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 47 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 51 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 55 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 59 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 63 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 65 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 2 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 8 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 9 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 10 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 3 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.headers\conftest.c(3) : fatal error C1083: Cannot open include file: 'sys/socket.h': No such file or directory Possible ERROR while running preprocessor: ret = 512 Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/types.h sh: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c Executing: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c sh: conftest.c #line 1 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 7 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 11 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 15 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 19 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 23 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 27 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 31 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 35 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 39 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 43 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 47 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 51 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 55 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 59 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 63 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 65 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 2 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 8 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 9 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 10 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 3 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sys/types.h" #pragma once #line 18 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sys/types.h" #line 25 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sys/types.h" #line 33 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sys/types.h" #line 34 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sys/types.h" typedef __w64 long __time32_t; #line 47 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sys/types.h" typedef __int64 __time64_t; #line 52 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sys/types.h" typedef __time64_t time_t; #line 59 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sys/types.h" #line 61 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sys/types.h" typedef unsigned short _ino_t; typedef unsigned short ino_t; #line 71 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sys/types.h" #line 74 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sys/types.h" typedef unsigned int _dev_t; typedef unsigned int dev_t; #line 84 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sys/types.h" #line 87 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sys/types.h" typedef long _off_t; typedef long off_t; #line 97 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sys/types.h" #line 100 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sys/types.h" #line 102 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sys/types.h" #line 4 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" Defined "HAVE_SYS_TYPES_H" to "1" ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: malloc.h sh: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c Executing: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c sh: conftest.c #line 1 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 7 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 11 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 15 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 19 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 23 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 27 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 31 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 35 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 39 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 43 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 47 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 51 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 55 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 59 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 63 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 67 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 69 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 2 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 8 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 9 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 10 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 3 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\malloc.h" #pragma once #line 18 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\malloc.h" #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 22 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 23 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 38 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 42 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 65 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 67 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #pragma once #line 112 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 117 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 122 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 123 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 145 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 149 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" Defined "HAVE_MALLOC_H" to "1" ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: time.h sh: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c Executing: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c sh: conftest.c #line 1 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 7 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 11 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 15 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 19 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 23 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 27 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 31 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 35 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 39 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 43 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 47 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 51 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 55 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 59 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 63 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 67 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 71 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 73 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 2 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 8 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 9 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 10 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 3 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\time.h" #pragma once #line 19 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\time.h" #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 22 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 23 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 38 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 42 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 65 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 67 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #pragma once #line 112 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 117 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 122 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 123 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 145 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 149 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" Defined "HAVE_TIME_H" to "1" ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: Direct.h sh: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c Executing: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c sh: conftest.c #line 1 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 7 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 11 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 15 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 19 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 23 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 27 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 31 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 35 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 39 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 43 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 47 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 51 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 55 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 59 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 63 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 67 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 71 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 73 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 2 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 8 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 9 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 10 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 3 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\Direct.h" #pragma once #line 17 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\Direct.h" #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 22 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 23 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 38 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 42 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 65 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 67 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #pragma once #line 112 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 117 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 122 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 123 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 145 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 149 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" Defined "HAVE_DIRECT_H" to "1" ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: Ws2tcpip.h sh: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c Executing: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c sh: conftest.c #line 1 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 7 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 11 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 15 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 19 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 23 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 27 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 31 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 35 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 39 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 43 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 47 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 51 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 55 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 59 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 63 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 67 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 71 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 75 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 77 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 2 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 8 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 9 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 10 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 3 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "C:\\Program Files\\Microsoft SDKs\\Windows\\v6.0A\\include\\Ws2tcpip.h" #pragma once #line 25 "C:\\Program Files\\Microsoft SDKs\\Windows\\v6.0A\\include\\Ws2tcpip.h" #line 1 "C:\\Program Files\\Microsoft SDKs\\Windows\\v6.0A\\include\\winsock2.h" #pragma once #line 1 "C:\\Program Files\\Microsoft SDKs\\Windows\\v6.0A\\include\\pshpack4.h" #pragma warning(disable:4103) #pragma pack(push,4) #line 30 "C:\\Program Files\\Microsoft SDKs\\Windows\\v6.0A\\include\\pshpack4.h" #line 33 "C:\\Program Files\\Microsoft SDKs\\Windows\\v6.0A\\include\\pshpack4.h" #line 34 "C:\\Program Files\\Microsoft SDKs\\Windows\\v6.0A\\include\\pshpack4.h" #line 45 "C:\\Program Files\\Microsoft SDKs\\Windows\\v6.0A\\include\\winsock2.h" #line 49 "C:\\Program Files\\Microsoft SDKs\\Windows\\v6.0A\\include\\winsock2.h" #line 57 "C:\\Program Files\\Microsoft SDKs\\Windows\\v6.0A\\include\\winsock2.h" #line 61 "C:\\Program Files\\Microsoft SDKs\\Windows\\v6.0A\\include\\winsock2.h" #line 1 "C:\\Program Files\\Microsoft SDKs\\Windows\\v6.0A\\include\\windows.h" #line 1 "C:\\Program Files\\Microsoft SDKs\\Windows\\v6.0A\\include\\sdkddkver.h" #pragma once #line 141 "C:\\Program Files\\Microsoft SDKs\\Windows\\v6.0A\\include\\sdkddkver.h" #line 153 "C:\\Program Files\\Microsoft SDKs\\Windows\\v6.0A\\include\\sdkddkver.h" #line 161 "C:\\Program Files\\Microsoft SDKs\\Windows\\v6.0A\\include\\sdkddkver.h" #line 162 "C:\\Program Files\\Microsoft SDKs\\Windows\\v6.0A\\include\\sdkddkver.h" #line 170 "C:\\Program Files\\Microsoft SDKs\\Windows\\v6.0A\\include\\sdkddkver.h" #line 171 "C:\\Program Files\\Microsoft SDKs\\Windows\\v6.0A\\include\\sdkddkver.h" #line 178 "C:\\Program Files\\Microsoft SDKs\\Windows\\v6.0A\\include\\sdkddkver.h" #line 180 "C:\\Program Files\\Microsoft SDKs\\Windows\\v6.0A\\include\\sdkddkver.h" #line 182 "C:\\Program Files\\Microsoft SDKs\\Windows\\v6.0A\\include\\sdkddkver.h" #line 184 "C:\\Program Files\\Microsoft SDKs\\Windows\\v6.0A\\include\\sdkddkver.h" #line 186 "C:\\Program Files\\Microsoft SDKs\\Windows\\v6.0A\\include\\sdkddkver.h" #line 189 "C:\\Program Files\\Microsoft SDKs\\Windows\\v6.0A\\include\\sdkddkver.h" #line 190 "C:\\Program Files\\Microsoft SDKs\\Windows\\v6.0A\\include\\sdkddkver.h" #line 199 "C:\\Program Files\\Microsoft SDKs\\Windows\\v6.0A\\include\\sdkddkver.h" #line 203 "C:\\Program Files\\Microsoft SDKs\\Windows\\v6.0A\\include\\sdkddkver.h" #line 207 "C:\\Program Files\\Microsoft SDKs\\Windows\\v6.0A\\include\\sdkddkver.h" #line 211 "C:\\Program Files\\Microsoft SDKs\\Windows\\v6.0A\\include\\sdkddkver.h" #line 215 "C:\\Program Files\\Microsoft SDKs\\Windows\\v6.0A\\include\\sdkddkver.h" #line 219 "C:\\Program Files\\Microsoft SDKs\\Windows\\v6.0A\\include\\sdkddkver.h" #line 221 "C:\\Program Files\\Microsoft SDKs\\Windows\\v6.0A\\include\\sdkddkver.h" #line 224 "C:\\Program Files\\Microsoft SDKs\\Windows\\v6.0A\\include\\sdkddkver.h" #line 22 "C:\\Program Files\\Microsoft SDKs\\Windows\\v6.0A\\include\\windows.h" #pragma once #line 29 "C:\\Program Files\\Microsoft SDKs\\Windows\\v6.0A\\include\\windows.h" #line 79 "C:\\Program Files\\Microsoft SDKs\\Windows\\v6.0A\\include\\windows.h" #line 100 "C:\\Program Files\\Microsoft SDKs\\Windows\\v6.0A\\include\\windows.h" #line 104 "C:\\Program Files\\Microsoft SDKs\\Windows\\v6.0A\\include\\windows.h" #line 108 "C:\\Program Files\\Microsoft SDKs\\Windows\\v6.0A\\include\\windows.h" #line 112 "C:\\Program Files\\Microsoft SDKs\\Windows\\v6.0A\\include\\windows.h" #line 116 "C:\\Program Files\\Microsoft SDKs\\Windows\\v6.0A\\include\\windows.h" #line 122 "C:\\Program Files\\Microsoft SDKs\\Windows\\v6.0A\\include\\windows.h" #line 127 "C:\\Program Files\\Microsoft SDKs\\Windows\\v6.0A\\include\\windows.h" #line 128 "C:\\Program Files\\Microsoft SDKs\\Windows\\v6.0A\\include\\windows.h" #pragma warning(disable:4116) #line 135 "C:\\Program Files\\Microsoft SDKs\\Windows\\v6.0A\\include\\windows.h" #line 136 "C:\\Program Files\\Microsoft SDKs\\Windows\\v6.0A\\include\\windows.h" #line 137 "C:\\Program Files\\Microsoft SDKs\\Windows\\v6.0A\\include\\windows.h" #pragma warning(disable:4514) #pragma warning(disable:4103) #line 144 "C:\\Program Files\\Microsoft SDKs\\Windows\\v6.0A\\include\\windows.h" #pragma warning(push) #line 147 "C:\\Program Files\\Microsoft SDKs\\Windows\\v6.0A\\include\\windows.h" #pragma warning(disable:4001) #pragma warning(disable:4201) #pragma warning(disable:4214) #line 151 "C:\\Program Files\\Microsoft SDKs\\Windows\\v6.0A\\include\\windows.h" #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\excpt.h" #pragma once #line 18 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\excpt.h" #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 22 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 23 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 38 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 42 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 65 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 67 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #pragma once #line 112 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 117 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 122 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 123 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 145 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 149 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" Defined "HAVE_WS2TCPIP_H" to "1" ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: endian.h sh: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c Executing: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c sh: conftest.c #line 1 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 7 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 11 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 15 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 19 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 23 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 27 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 31 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 35 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 39 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 43 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 47 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 51 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 55 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 59 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 63 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 67 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 71 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 75 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 79 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 81 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 2 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 8 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 9 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 10 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 3 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.headers\conftest.c(3) : fatal error C1083: Cannot open include file: 'endian.h': No such file or directory Possible ERROR while running preprocessor: ret = 512 Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: ieeefp.h sh: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c Executing: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c sh: conftest.c #line 1 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 7 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 11 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 15 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 19 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 23 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 27 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 31 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 35 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 39 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 43 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 47 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 51 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 55 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 59 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 63 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 67 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 71 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 75 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 79 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 81 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 2 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 8 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 9 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 10 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 3 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.headers\conftest.c(3) : fatal error C1083: Cannot open include file: 'ieeefp.h': No such file or directory Possible ERROR while running preprocessor: ret = 512 Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: strings.h sh: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c Executing: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c sh: conftest.c #line 1 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 7 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 11 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 15 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 19 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 23 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 27 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 31 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 35 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 39 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 43 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 47 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 51 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 55 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 59 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 63 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 67 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 71 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 75 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 79 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 81 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 2 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 8 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 9 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 10 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 3 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.headers\conftest.c(3) : fatal error C1083: Cannot open include file: 'strings.h': No such file or directory Possible ERROR while running preprocessor: ret = 512 Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sched.h sh: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c Executing: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c sh: conftest.c #line 1 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 7 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 11 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 15 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 19 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 23 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 27 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 31 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 35 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 39 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 43 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 47 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 51 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 55 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 59 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 63 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 67 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 71 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 75 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 79 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 81 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 2 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 8 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 9 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 10 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 3 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.headers\conftest.c(3) : fatal error C1083: Cannot open include file: 'sched.h': No such file or directory Possible ERROR while running preprocessor: ret = 512 Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: cxxabi.h sh: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c Executing: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c sh: conftest.c #line 1 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 7 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 11 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 15 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 19 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 23 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 27 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 31 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 35 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 39 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 43 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 47 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 51 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 55 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 59 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 63 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 67 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 71 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 75 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 79 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 81 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 2 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 8 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 9 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 10 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 3 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.headers\conftest.c(3) : fatal error C1083: Cannot open include file: 'cxxabi.h': No such file or directory Possible ERROR while running preprocessor: ret = 512 Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/systeminfo.h sh: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c Executing: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c sh: conftest.c #line 1 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 7 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 11 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 15 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 19 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 23 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 27 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 31 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 35 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 39 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 43 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 47 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 51 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 55 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 59 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 63 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 67 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 71 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 75 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 79 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 81 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 2 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 8 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 9 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 10 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 3 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.headers\conftest.c(3) : fatal error C1083: Cannot open include file: 'sys/systeminfo.h': No such file or directory Possible ERROR while running preprocessor: ret = 512 Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: dos.h sh: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c Executing: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c sh: conftest.c #line 1 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 7 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 11 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 15 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 19 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 23 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 27 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 31 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 35 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 39 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 43 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 47 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 51 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 55 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 59 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 63 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 67 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 71 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 75 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 79 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 81 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 2 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 8 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 9 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 10 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 3 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\dos.h" #pragma once #line 19 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\dos.h" #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 22 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 23 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 38 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 42 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 65 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 67 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #pragma once #line 112 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 117 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 122 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 123 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 145 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 149 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" Defined "HAVE_DOS_H" to "1" ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: WindowsX.h sh: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c Executing: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c sh: conftest.c #line 1 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 7 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 11 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 15 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 19 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 23 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 27 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 31 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 35 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 39 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 43 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 47 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 51 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 55 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 59 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 63 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 67 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 71 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 75 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 79 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 83 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 85 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 2 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 8 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 9 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 10 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 3 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "C:\\Program Files\\Microsoft SDKs\\Windows\\v6.0A\\include\\WindowsX.h" #pragma once #line 17 "C:\\Program Files\\Microsoft SDKs\\Windows\\v6.0A\\include\\WindowsX.h" #line 35 "C:\\Program Files\\Microsoft SDKs\\Windows\\v6.0A\\include\\WindowsX.h" #line 36 "C:\\Program Files\\Microsoft SDKs\\Windows\\v6.0A\\include\\WindowsX.h" #line 37 "C:\\Program Files\\Microsoft SDKs\\Windows\\v6.0A\\include\\WindowsX.h" #line 57 "C:\\Program Files\\Microsoft SDKs\\Windows\\v6.0A\\include\\WindowsX.h" #line 79 "C:\\Program Files\\Microsoft SDKs\\Windows\\v6.0A\\include\\WindowsX.h" #line 88 "C:\\Program Files\\Microsoft SDKs\\Windows\\v6.0A\\include\\WindowsX.h" #line 103 "C:\\Program Files\\Microsoft SDKs\\Windows\\v6.0A\\include\\WindowsX.h" #line 145 "C:\\Program Files\\Microsoft SDKs\\Windows\\v6.0A\\include\\WindowsX.h" Defined "HAVE_WINDOWSX_H" to "1" ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/sysinfo.h sh: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c Executing: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c sh: conftest.c #line 1 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 7 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 11 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 15 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 19 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 23 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 27 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 31 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 35 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 39 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 43 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 47 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 51 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 55 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 59 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 63 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 67 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 71 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 75 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 79 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 83 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 87 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 89 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 2 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 8 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 9 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 10 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 3 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.headers\conftest.c(3) : fatal error C1083: Cannot open include file: 'sys/sysinfo.h': No such file or directory Possible ERROR while running preprocessor: ret = 512 Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/wait.h sh: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c Executing: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c sh: conftest.c #line 1 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 7 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 11 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 15 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 19 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 23 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 27 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 31 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 35 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 39 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 43 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 47 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 51 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 55 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 59 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 63 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 67 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 71 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 75 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 79 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 83 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 87 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 89 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 2 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 8 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 9 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 10 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 3 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.headers\conftest.c(3) : fatal error C1083: Cannot open include file: 'sys/wait.h': No such file or directory Possible ERROR while running preprocessor: ret = 512 Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: stdlib.h sh: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c Executing: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c sh: conftest.c #line 1 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 7 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 11 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 15 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 19 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 23 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 27 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 31 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 35 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 39 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 43 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 47 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 51 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 55 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 59 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 63 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 67 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 71 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 75 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 79 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 83 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 87 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 89 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 2 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 8 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 9 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 10 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 3 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\stdlib.h" #pragma once #line 19 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\stdlib.h" #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 22 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 23 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 38 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 42 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 65 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 67 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #pragma once #line 112 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 117 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 122 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 123 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 145 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 149 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" Defined "HAVE_STDLIB_H" to "1" ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: pthread.h sh: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c Executing: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c sh: conftest.c #line 1 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 7 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 11 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 15 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 19 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 23 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 27 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 31 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 35 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 39 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 43 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 47 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 51 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 55 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 59 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 63 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 67 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 71 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 75 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 79 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 83 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 87 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 91 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 93 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 2 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 8 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 9 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 10 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 3 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.headers\conftest.c(3) : fatal error C1083: Cannot open include file: 'pthread.h': No such file or directory Possible ERROR while running preprocessor: ret = 512 Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: setjmp.h sh: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c Executing: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c sh: conftest.c #line 1 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 7 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 11 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 15 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 19 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 23 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 27 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 31 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 35 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 39 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 43 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 47 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 51 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 55 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 59 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 63 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 67 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 71 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 75 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 79 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 83 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 87 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 91 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 93 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 2 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 8 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 9 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 10 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 3 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\setjmp.h" #pragma once #line 19 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\setjmp.h" #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 22 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 23 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 38 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 42 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 65 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 67 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #pragma once #line 112 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 117 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 122 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 123 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 145 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 149 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" Defined "HAVE_SETJMP_H" to "1" ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/utsname.h sh: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c Executing: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c sh: conftest.c #line 1 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 7 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 11 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 15 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 19 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 23 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 27 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 31 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 35 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 39 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 43 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 47 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 51 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 55 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 59 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 63 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 67 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 71 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 75 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 79 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 83 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 87 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 91 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 95 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 97 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 2 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 8 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 9 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 10 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 3 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.headers\conftest.c(3) : fatal error C1083: Cannot open include file: 'sys/utsname.h': No such file or directory Possible ERROR while running preprocessor: ret = 512 Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: machine/endian.h sh: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c Executing: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c sh: conftest.c #line 1 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 7 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 11 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 15 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 19 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 23 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 27 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 31 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 35 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 39 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 43 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 47 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 51 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 55 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 59 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 63 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 67 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 71 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 75 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 79 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 83 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 87 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 91 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 95 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 97 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 2 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 8 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 9 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 10 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 3 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.headers\conftest.c(3) : fatal error C1083: Cannot open include file: 'machine/endian.h': No such file or directory Possible ERROR while running preprocessor: ret = 512 Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: limits.h sh: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c Executing: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c sh: conftest.c #line 1 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 7 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 11 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 15 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 19 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 23 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 27 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 31 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 35 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 39 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 43 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 47 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 51 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 55 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 59 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 63 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 67 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 71 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 75 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 79 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 83 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 87 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 91 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 95 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 97 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 2 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 8 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 9 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 10 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 3 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\limits.h" #pragma once #line 18 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\limits.h" #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 22 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 23 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 38 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 42 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 65 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 67 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #pragma once #line 112 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 117 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 122 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 123 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 145 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 149 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" Defined "HAVE_LIMITS_H" to "1" ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: fcntl.h sh: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c Executing: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c sh: conftest.c #line 1 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 7 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 11 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 15 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 19 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 23 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 27 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 31 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 35 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 39 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 43 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 47 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 51 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 55 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 59 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 63 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 67 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 71 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 75 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 79 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 83 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 87 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 91 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 95 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 99 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 101 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 2 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 8 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 9 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 10 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 3 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\fcntl.h" #pragma once #line 18 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\fcntl.h" #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 22 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 23 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 38 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 42 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 65 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 67 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #pragma once #line 112 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 117 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 122 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 123 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 145 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 149 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" Defined "HAVE_FCNTL_H" to "1" ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: string.h sh: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c Executing: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c sh: conftest.c #line 1 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 7 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 11 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 15 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 19 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 23 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 27 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 31 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 35 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 39 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 43 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 47 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 51 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 55 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 59 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 63 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 67 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 71 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 75 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 79 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 83 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 87 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 91 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 95 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 99 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 103 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 105 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 2 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 8 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 9 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 10 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 3 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\string.h" #pragma once #line 18 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\string.h" #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 22 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 23 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 38 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 42 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 65 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 67 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #pragma once #line 112 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 117 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 122 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 123 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 145 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 149 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" Defined "HAVE_STRING_H" to "1" ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/times.h sh: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c Executing: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c sh: conftest.c #line 1 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 7 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 11 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 15 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 19 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 23 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 27 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 31 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 35 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 39 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 43 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 47 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 51 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 55 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 59 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 63 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 67 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 71 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 75 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 79 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 83 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 87 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 91 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 95 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 99 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 103 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 107 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 109 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 2 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 8 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 9 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 10 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 3 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.headers\conftest.c(3) : fatal error C1083: Cannot open include file: 'sys/times.h': No such file or directory Possible ERROR while running preprocessor: ret = 512 Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: io.h sh: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c Executing: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c sh: conftest.c #line 1 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 7 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 11 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 15 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 19 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 23 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 27 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 31 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 35 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 39 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 43 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 47 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 51 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 55 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 59 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 63 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 67 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 71 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 75 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 79 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 83 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 87 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 91 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 95 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 99 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 103 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 107 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 109 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 2 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 8 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 9 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 10 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 3 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\io.h" #pragma once #line 17 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\io.h" #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 22 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 23 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 38 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 42 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 65 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 67 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #pragma once #line 112 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 117 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 122 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 123 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 145 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 149 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" Defined "HAVE_IO_H" to "1" ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: stdint.h sh: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c Executing: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c sh: conftest.c #line 1 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 7 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 11 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 15 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 19 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 23 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 27 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 31 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 35 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 39 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 43 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 47 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 51 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 55 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 59 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 63 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 67 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 71 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 75 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 79 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 83 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 87 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 91 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 95 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 99 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 103 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 107 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 111 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 113 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 2 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 8 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 9 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 10 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 3 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.headers\conftest.c(3) : fatal error C1083: Cannot open include file: 'stdint.h': No such file or directory Possible ERROR while running preprocessor: ret = 512 Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: pwd.h sh: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c Executing: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c sh: conftest.c #line 1 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 7 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 11 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 15 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 19 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 23 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 27 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 31 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 35 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 39 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 43 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 47 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 51 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 55 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 59 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 63 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 67 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 71 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 75 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 79 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 83 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 87 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 91 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 95 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 99 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 103 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 107 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 111 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 113 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 2 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 8 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 9 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 10 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 3 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.headers\conftest.c(3) : fatal error C1083: Cannot open include file: 'pwd.h': No such file or directory Possible ERROR while running preprocessor: ret = 512 Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: float.h sh: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c Executing: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c sh: conftest.c #line 1 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 7 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 11 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 15 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 19 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 23 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 27 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 31 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 35 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 39 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 43 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 47 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 51 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 55 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 59 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 63 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 67 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 71 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 75 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 79 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 83 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 87 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 91 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 95 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 99 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 103 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 107 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 111 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 113 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 2 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 8 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 9 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 10 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 3 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\float.h" #pragma once #line 19 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\float.h" #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 22 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 23 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 38 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 42 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 65 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 67 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #pragma once #line 112 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 117 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 122 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 123 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 145 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 149 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" Defined "HAVE_FLOAT_H" to "1" ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/param.h sh: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c Executing: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c sh: conftest.c #line 1 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 7 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 11 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 15 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 19 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 23 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 27 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 31 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 35 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 39 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 43 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 47 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 51 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 55 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 59 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 63 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 67 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 71 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 75 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 79 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 83 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 87 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 91 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 95 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 99 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 103 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 107 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 111 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 115 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 117 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 2 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 8 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 9 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 10 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 3 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.headers\conftest.c(3) : fatal error C1083: Cannot open include file: 'sys/param.h': No such file or directory Possible ERROR while running preprocessor: ret = 512 Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: netdb.h sh: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c Executing: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c sh: conftest.c #line 1 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 7 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 11 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 15 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 19 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 23 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 27 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 31 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 35 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 39 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 43 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 47 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 51 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 55 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 59 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 63 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 67 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 71 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 75 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 79 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 83 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 87 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 91 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 95 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 99 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 103 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 107 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 111 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 115 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 117 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 2 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 8 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 9 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 10 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 3 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.headers\conftest.c(3) : fatal error C1083: Cannot open include file: 'netdb.h': No such file or directory Possible ERROR while running preprocessor: ret = 512 Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: search.h sh: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c Executing: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c sh: conftest.c #line 1 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 7 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 11 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 15 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 19 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 23 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 27 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 31 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 35 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 39 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 43 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 47 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 51 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 55 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 59 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 63 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 67 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 71 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 75 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 79 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 83 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 87 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 91 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 95 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 99 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 103 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 107 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 111 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 115 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 117 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 2 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 8 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 9 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 10 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 3 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\search.h" #pragma once #line 18 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\search.h" #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 22 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 23 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 38 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 42 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 65 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 67 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #pragma once #line 112 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 117 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 122 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 123 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 145 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 149 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" Defined "HAVE_SEARCH_H" to "1" ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: mathimf.h sh: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c Executing: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c sh: conftest.c #line 1 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 7 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 11 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 15 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 19 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 23 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 27 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 31 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 35 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 39 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 43 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 47 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 51 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 55 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 59 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 63 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 67 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 71 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 75 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 79 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 83 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 87 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 91 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 95 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 99 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 103 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 107 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 111 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 115 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 119 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 121 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 2 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 8 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 9 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 10 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 3 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.headers\conftest.c(3) : fatal error C1083: Cannot open include file: 'mathimf.h': No such file or directory Possible ERROR while running preprocessor: ret = 512 Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/procfs.h sh: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c Executing: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c sh: conftest.c #line 1 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 7 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 11 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 15 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 19 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 23 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 27 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 31 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 35 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 39 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 43 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 47 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 51 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 55 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 59 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 63 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 67 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 71 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 75 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 79 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 83 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 87 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 91 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 95 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 99 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 103 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 107 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 111 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 115 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 119 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 121 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 2 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 8 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 9 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 10 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 3 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.headers\conftest.c(3) : fatal error C1083: Cannot open include file: 'sys/procfs.h': No such file or directory Possible ERROR while running preprocessor: ret = 512 Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/resource.h sh: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c Executing: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c sh: conftest.c #line 1 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 7 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 11 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 15 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 19 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 23 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 27 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 31 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 35 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 39 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 43 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 47 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 51 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 55 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 59 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 63 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 67 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 71 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 75 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 79 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 83 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 87 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 91 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 95 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 99 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 103 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 107 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 111 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 115 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 119 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 121 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 2 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 8 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 9 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 10 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 3 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.headers\conftest.c(3) : fatal error C1083: Cannot open include file: 'sys/resource.h': No such file or directory Possible ERROR while running preprocessor: ret = 512 Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: unistd.h sh: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c Executing: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c sh: conftest.c #line 1 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 7 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 11 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 15 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 19 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 23 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 27 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 31 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 35 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 39 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 43 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 47 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 51 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 55 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 59 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 63 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 67 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 71 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 75 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 79 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 83 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 87 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 91 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 95 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 99 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 103 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 107 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 111 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 115 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 119 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 121 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 2 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 8 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 9 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 10 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 3 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.headers\conftest.c(3) : fatal error C1083: Cannot open include file: 'unistd.h': No such file or directory Possible ERROR while running preprocessor: ret = 512 Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST check from config.headers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: netinet/in.h sh: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c Executing: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c sh: conftest.c #line 1 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 7 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 11 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 15 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 19 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 23 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 27 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 31 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 35 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 39 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 43 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 47 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 51 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 55 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 59 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 63 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 67 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 71 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 75 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 79 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 83 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 87 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 91 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 95 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 99 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 103 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 107 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 111 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 115 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 119 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 121 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 2 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 8 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 9 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 10 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 3 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.headers\conftest.c(3) : fatal error C1083: Cannot open include file: 'netinet/in.h': No such file or directory Possible ERROR while running preprocessor: ret = 512 Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST checkRecursiveMacros from config.headers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/headers.py:218) TESTING: checkRecursiveMacros from config.headers(config/BuildSystem/config/headers.py:218) Checks that the preprocessor allows recursive macros, and if not defines HAVE_BROKEN_RECURSIVE_MACRO sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" void a(int i, int j) {} #define a(b) a(b,__LINE__) int main() { a(0); ; return 0; } ================================================================================ TEST configureCacheDetails from PETSc.utilities.cacheDetails(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/PETSc/utilities/cacheDetails.py:78) TESTING: configureCacheDetails from PETSc.utilities.cacheDetails(config/PETSc/utilities/cacheDetails.py:78) Try to determine the size and associativity of the cache. Pushing language C All intermediate test results are stored in /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails/conftest.c sh: conftest.c C:\cygwin\usr\include\sys/_types.h(31) : error C2054: expected '(' to follow '__extension__' C:\cygwin\usr\include\sys/_types.h(31) : error C2085: '_off64_t' : not in formal parameter list C:\cygwin\usr\include\sys/_types.h(39) : error C2085: '_fpos_t' : not in formal parameter list C:\cygwin\usr\include\sys/_types.h(59) : error C2085: '_ssize_t' : not in formal parameter list C:\cygwin\usr\include\sys/_types.h(77) : error C2057: expected constant expression C:\cygwin\usr\include\sys/_types.h(78) : error C4980: '__value' : use of this keyword requires /clr:oldSyntax command line option C:\cygwin\usr\include\sys/_types.h(78) : error C2059: syntax error : '__value' C:\cygwin\usr\include\sys/_types.h(79) : error C2085: '_mbstate_t' : not in formal parameter list C:\cygwin\usr\include\sys/_types.h(83) : error C2085: '_flock_t' : not in formal parameter list C:\cygwin\usr\include\sys/_types.h(88) : error C2085: '_iconv_t' : not in formal parameter list C:\cygwin\usr\include\sys/unistd.h(16) : error C2085: 'environ' : not in formal parameter list C:\cygwin\usr\include\sys/unistd.h(18) : error C2085: '_exit' : not in formal parameter list C:\cygwin\usr\include\sys/unistd.h(20) : error C2085: 'access' : not in formal parameter list C:\cygwin\usr\include\sys/unistd.h(21) : error C2085: 'alarm' : not in formal parameter list C:\cygwin\usr\include\sys/unistd.h(22) : error C2085: 'chdir' : not in formal parameter list C:\cygwin\usr\include\sys/unistd.h(23) : error C2085: 'chmod' : not in formal parameter list C:\cygwin\usr\include\sys/unistd.h(25) : error C2085: 'chown' : not in formal parameter list C:\cygwin\usr\include\sys/unistd.h(30) : error C2085: 'close' : not in formal parameter list C:\cygwin\usr\include\sys/unistd.h(34) : error C2085: 'ctermid' : not in formal parameter list C:\cygwin\usr\include\sys/unistd.h(35) : error C2085: 'cuserid' : not in formal parameter list C:\cygwin\usr\include\sys/unistd.h(39) : error C2085: 'dup' : not in formal parameter list C:\cygwin\usr\include\sys/unistd.h(40) : error C2085: 'dup2' : not in formal parameter list C:\cygwin\usr\include\sys/unistd.h(47) : error C2085: 'execl' : not in formal parameter list C:\cygwin\usr\include\sys/unistd.h(48) : error C2085: 'execle' : not in formal parameter list C:\cygwin\usr\include\sys/unistd.h(49) : error C2085: 'execlp' : not in formal parameter list C:\cygwin\usr\include\sys/unistd.h(53) : error C2085: 'execv' : not in formal parameter list C:\cygwin\usr\include\sys/unistd.h(54) : error C2085: 'execve' : not in formal parameter list C:\cygwin\usr\include\sys/unistd.h(55) : error C2085: 'execvp' : not in formal parameter list C:\cygwin\usr\include\sys/unistd.h(60) : error C2085: 'faccessat' : not in formal parameter list C:\cygwin\usr\include\sys/unistd.h(65) : error C2085: 'fchmod' : not in formal parameter list C:\cygwin\usr\include\sys/unistd.h(67) : error C2085: 'fchown' : not in formal parameter list C:\cygwin\usr\include\sys/unistd.h(70) : error C2085: 'fchownat' : not in formal parameter list C:\cygwin\usr\include\sys/unistd.h(75) : error C2061: syntax error : identifier 'pid_t' C:\cygwin\usr\include\sys/unistd.h(87) : error C2061: syntax error : identifier 'getegid' C:\cygwin\usr\include\sys/unistd.h(87) : error C2059: syntax error : ';' C:\cygwin\usr\include\sys/unistd.h(87) : error C2059: syntax error : ')' C:\cygwin\usr\include\sys/unistd.h(88) : error C2061: syntax error : identifier 'geteuid' C:\cygwin\usr\include\sys/unistd.h(88) : error C2059: syntax error : ';' C:\cygwin\usr\include\sys/unistd.h(88) : error C2059: syntax error : ')' C:\cygwin\usr\include\sys/unistd.h(89) : error C2061: syntax error : identifier 'getgid' C:\cygwin\usr\include\sys/unistd.h(89) : error C2059: syntax error : ';' C:\cygwin\usr\include\sys/unistd.h(89) : error C2059: syntax error : ')' C:\cygwin\usr\include\sys/unistd.h(104) : error C2061: syntax error : identifier 'getpgid' C:\cygwin\usr\include\sys/unistd.h(104) : error C2059: syntax error : ';' C:\cygwin\usr\include\sys/unistd.h(104) : error C2059: syntax error : ')' C:\cygwin\usr\include\sys/unistd.h(105) : error C2061: syntax error : identifier 'getpgrp' C:\cygwin\usr\include\sys/unistd.h(105) : error C2059: syntax error : ';' C:\cygwin\usr\include\sys/unistd.h(105) : error C2059: syntax error : ')' C:\cygwin\usr\include\sys/unistd.h(106) : error C2061: syntax error : identifier 'getpid' C:\cygwin\usr\include\sys/unistd.h(106) : error C2059: syntax error : ';' C:\cygwin\usr\include\sys/unistd.h(106) : error C2059: syntax error : ')' C:\cygwin\usr\include\sys/unistd.h(107) : error C2061: syntax error : identifier 'getppid' C:\cygwin\usr\include\sys/unistd.h(107) : error C2059: syntax error : ';' C:\cygwin\usr\include\sys/unistd.h(107) : error C2059: syntax error : ')' C:\cygwin\usr\include\sys/unistd.h(112) : error C2061: syntax error : identifier 'getuid' C:\cygwin\usr\include\sys/unistd.h(112) : error C2059: syntax error : ';' C:\cygwin\usr\include\sys/unistd.h(112) : error C2059: syntax error : ')' C:\cygwin\usr\include\sys/unistd.h(147) : error C2061: syntax error : identifier 'pread' C:\cygwin\usr\include\sys/unistd.h(147) : error C2059: syntax error : ';' C:\cygwin\usr\include\sys/unistd.h(147) : error C2059: syntax error : ')' C:\cygwin\usr\include\sys/unistd.h(148) : error C2061: syntax error : identifier 'pwrite' C:\cygwin\usr\include\sys/unistd.h(148) : error C2059: syntax error : ';' C:\cygwin\usr\include\sys/unistd.h(148) : error C2059: syntax error : ')' C:\cygwin\usr\include\sys/unistd.h(178) : error C2061: syntax error : identifier 'setsid' C:\cygwin\usr\include\sys/unistd.h(178) : error C2059: syntax error : ';' C:\cygwin\usr\include\sys/unistd.h(178) : error C2059: syntax error : ')' C:\cygwin\usr\include\sys/unistd.h(188) : error C2061: syntax error : identifier 'tcgetpgrp' C:\cygwin\usr\include\sys/unistd.h(188) : error C2059: syntax error : ';' C:\cygwin\usr\include\sys/unistd.h(188) : error C2059: syntax error : ')' C:\cygwin\usr\include\sys/unistd.h(211) : error C2061: syntax error : identifier 'vfork' C:\cygwin\usr\include\sys/unistd.h(211) : error C2059: syntax error : ';' C:\cygwin\usr\include\sys/unistd.h(211) : error C2059: syntax error : ')' C:\cygwin\usr\include\sys/unistd.h(256) : error C2061: syntax error : identifier 'readlink' C:\cygwin\usr\include\sys/unistd.h(256) : error C2059: syntax error : ';' C:\cygwin\usr\include\sys/unistd.h(256) : error C2059: syntax error : ')' C:\cygwin\usr\include\sys/unistd.h(259) : error C2061: syntax error : identifier 'readlinkat' C:\cygwin\usr\include\sys/unistd.h(259) : error C2059: syntax error : ';' C:\cygwin\usr\include\sys/unistd.h(259) : error C2059: syntax error : ')' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\PETSc.utilities.cacheDetails\conftest.c(4) : error C2065: '_SC_LEVEL1_DCACHE_SIZE' : undeclared identifier Possible ERROR while running compiler: conftest.c C:\cygwin\usr\include\sys/_types.h(31) : error C2054: expected '(' to follow '__extension__' C:\cygwin\usr\include\sys/_types.h(31) : error C2085: '_off64_t' : not in formal parameter list C:\cygwin\usr\include\sys/_types.h(39) : error C2085: '_fpos_t' : not in formal parameter list C:\cygwin\usr\include\sys/_types.h(59) : error C2085: '_ssize_t' : not in formal parameter list C:\cygwin\usr\include\sys/_types.h(77) : error C2057: expected constant expression C:\cygwin\usr\include\sys/_types.h(78) : error C4980: '__value' : use of this keyword requires /clr:oldSyntax command line option C:\cygwin\usr\include\sys/_types.h(78) : error C2059: syntax error : '__value' C:\cygwin\usr\include\sys/_types.h(79) : error C2085: '_mbstate_t' : not in formal parameter list C:\cygwin\usr\include\sys/_types.h(83) : error C2085: '_flock_t' : not in formal parameter list C:\cygwin\usr\include\sys/_types.h(88) : error C2085: '_iconv_t' : not in formal parameter list C:\cygwin\usr\include\sys/unistd.h(16) : error C2085: 'environ' : not in formal parameter list C:\cygwin\usr\include\sys/unistd.h(18) : error C2085: '_exit' : not in formal parameter list C:\cygwin\usr\include\sys/unistd.h(20) : error C2085: 'access' : not in formal parameter list C:\cygwin\usr\include\sys/unistd.h(21) : error C2085: 'alarm' : not in formal parameter list C:\cygwin\usr\include\sys/unistd.h(22) : error C2085: 'chdir' : not in formal parameter list C:\cygwin\usr\include\sys/unistd.h(23) : error C2085: 'chmod' : not in formal parameter list C:\cygwin\usr\include\sys/unistd.h(25) : error C2085: 'chown' : not in formal parameter list C:\cygwin\usr\include\sys/unistd.h(30) : error C2085: 'close' : not in formal parameter list C:\cygwin\usr\include\sys/unistd.h(34) : error C2085: 'ctermid' : not in formal parameter list C:\cygwin\usr\include\sys/unistd.h(35) : error C2085: 'cuserid' : not in formal parameter list C:\cygwin\usr\include\sys/unistd.h(39) : error C2085: 'dup' : not in formal parameter list C:\cygwin\usr\include\sys/unistd.h(40) : error C2085: 'dup2' : not in formal parameter list C:\cygwin\usr\include\sys/unistd.h(47) : error C2085: 'execl' : not in formal parameter list C:\cygwin\usr\include\sys/unistd.h(48) : error C2085: 'execle' : not in formal parameter list C:\cygwin\usr\include\sys/unistd.h(49) : error C2085: 'execlp' : not in formal parameter list C:\cygwin\usr\include\sys/unistd.h(53) : error C2085: 'execv' : not in formal parameter list C:\cygwin\usr\include\sys/unistd.h(54) : error C2085: 'execve' : not in formal parameter list C:\cygwin\usr\include\sys/unistd.h(55) : error C2085: 'execvp' : not in formal parameter list C:\cygwin\usr\include\sys/unistd.h(60) : error C2085: 'faccessat' : not in formal parameter list C:\cygwin\usr\include\sys/unistd.h(65) : error C2085: 'fchmod' : not in formal parameter list C:\cygwin\usr\include\sys/unistd.h(67) : error C2085: 'fchown' : not in formal parameter list C:\cygwin\usr\include\sys/unistd.h(70) : error C2085: 'fchownat' : not in formal parameter list C:\cygwin\usr\include\sys/unistd.h(75) : error C2061: syntax error : identifier 'pid_t' C:\cygwin\usr\include\sys/unistd.h(87) : error C2061: syntax error : identifier 'getegid' C:\cygwin\usr\include\sys/unistd.h(87) : error C2059: syntax error : ';' C:\cygwin\usr\include\sys/unistd.h(87) : error C2059: syntax error : ')' C:\cygwin\usr\include\sys/unistd.h(88) : error C2061: syntax error : identifier 'geteuid' C:\cygwin\usr\include\sys/unistd.h(88) : error C2059: syntax error : ';' C:\cygwin\usr\include\sys/unistd.h(88) : error C2059: syntax error : ')' C:\cygwin\usr\include\sys/unistd.h(89) : error C2061: syntax error : identifier 'getgid' C:\cygwin\usr\include\sys/unistd.h(89) : error C2059: syntax error : ';' C:\cygwin\usr\include\sys/unistd.h(89) : error C2059: syntax error : ')' C:\cygwin\usr\include\sys/unistd.h(104) : error C2061: syntax error : identifier 'getpgid' C:\cygwin\usr\include\sys/unistd.h(104) : error C2059: syntax error : ';' C:\cygwin\usr\include\sys/unistd.h(104) : error C2059: syntax error : ')' C:\cygwin\usr\include\sys/unistd.h(105) : error C2061: syntax error : identifier 'getpgrp' C:\cygwin\usr\include\sys/unistd.h(105) : error C2059: syntax error : ';' C:\cygwin\usr\include\sys/unistd.h(105) : error C2059: syntax error : ')' C:\cygwin\usr\include\sys/unistd.h(106) : error C2061: syntax error : identifier 'getpid' C:\cygwin\usr\include\sys/unistd.h(106) : error C2059: syntax error : ';' C:\cygwin\usr\include\sys/unistd.h(106) : error C2059: syntax error : ')' C:\cygwin\usr\include\sys/unistd.h(107) : error C2061: syntax error : identifier 'getppid' C:\cygwin\usr\include\sys/unistd.h(107) : error C2059: syntax error : ';' C:\cygwin\usr\include\sys/unistd.h(107) : error C2059: syntax error : ')' C:\cygwin\usr\include\sys/unistd.h(112) : error C2061: syntax error : identifier 'getuid' C:\cygwin\usr\include\sys/unistd.h(112) : error C2059: syntax error : ';' C:\cygwin\usr\include\sys/unistd.h(112) : error C2059: syntax error : ')' C:\cygwin\usr\include\sys/unistd.h(147) : error C2061: syntax error : identifier 'pread' C:\cygwin\usr\include\sys/unistd.h(147) : error C2059: syntax error : ';' C:\cygwin\usr\include\sys/unistd.h(147) : error C2059: syntax error : ')' C:\cygwin\usr\include\sys/unistd.h(148) : error C2061: syntax error : identifier 'pwrite' C:\cygwin\usr\include\sys/unistd.h(148) : error C2059: syntax error : ';' C:\cygwin\usr\include\sys/unistd.h(148) : error C2059: syntax error : ')' C:\cygwin\usr\include\sys/unistd.h(178) : error C2061: syntax error : identifier 'setsid' C:\cygwin\usr\include\sys/unistd.h(178) : error C2059: syntax error : ';' C:\cygwin\usr\include\sys/unistd.h(178) : error C2059: syntax error : ')' C:\cygwin\usr\include\sys/unistd.h(188) : error C2061: syntax error : identifier 'tcgetpgrp' C:\cygwin\usr\include\sys/unistd.h(188) : error C2059: syntax error : ';' C:\cygwin\usr\include\sys/unistd.h(188) : error C2059: syntax error : ')' C:\cygwin\usr\include\sys/unistd.h(211) : error C2061: syntax error : identifier 'vfork' C:\cygwin\usr\include\sys/unistd.h(211) : error C2059: syntax error : ';' C:\cygwin\usr\include\sys/unistd.h(211) : error C2059: syntax error : ')' C:\cygwin\usr\include\sys/unistd.h(256) : error C2061: syntax error : identifier 'readlink' C:\cygwin\usr\include\sys/unistd.h(256) : error C2059: syntax error : ';' C:\cygwin\usr\include\sys/unistd.h(256) : error C2059: syntax error : ')' C:\cygwin\usr\include\sys/unistd.h(259) : error C2061: syntax error : identifier 'readlinkat' C:\cygwin\usr\include\sys/unistd.h(259) : error C2059: syntax error : ';' C:\cygwin\usr\include\sys/unistd.h(259) : error C2059: syntax error : ')' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\PETSc.utilities.cacheDetails\conftest.c(4) : error C2065: '_SC_LEVEL1_DCACHE_SIZE' : undeclared identifier ret = 512 Source: #include "confdefs.h" #include "conffix.h" #include long getconf_LEVEL1_DCACHE_SIZE() { long val = sysconf(_SC_LEVEL1_DCACHE_SIZE); return (16 <= val && val <= 2147483647) ? val : 32768; } int main() { ; return 0; } sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails/conftest.c sh: conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\PETSc.utilities.cacheDetails\conftest.c(4) : warning C4047: 'initializing' : 'FILE *' differs in levels of indirection from 'int' Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include long getconf_LEVEL1_DCACHE_SIZE() { long val=-1; FILE *f = popen("getconf LEVEL1_DCACHE_SIZE","r"); fscanf(f,"%ld",&val); pclose(f); return (16 <= val && val <= 2147483647) ? val : 32768; } int main() { ; return 0; } Popping language C Pushing language C sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails/conftest.c sh: conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\PETSc.utilities.cacheDetails\conftest.c(5) : warning C4047: 'initializing' : 'FILE *' differs in levels of indirection from 'int' Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include long getconf_LEVEL1_DCACHE_SIZE() { long val=-1; FILE *f = popen("getconf LEVEL1_DCACHE_SIZE","r"); fscanf(f,"%ld",&val); pclose(f); return (16 <= val && val <= 2147483647) ? val : 32768; } int main() { FILE *output = fopen("conftestval","w"); if (!output) return 1; fprintf(output,"%ld",getconf_LEVEL1_DCACHE_SIZE()); fclose(output);; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: conftest.obj : error LNK2019: unresolved external symbol _pclose referenced in function _getconf_LEVEL1_DCACHE_SIZE conftest.obj : error LNK2019: unresolved external symbol _popen referenced in function _getconf_LEVEL1_DCACHE_SIZE C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\PETSc.utilities.cacheDetails\conftest.exe : fatal error LNK1120: 2 unresolved externals Possible ERROR while running linker: output: conftest.obj : error LNK2019: unresolved external symbol _pclose referenced in function _getconf_LEVEL1_DCACHE_SIZE conftest.obj : error LNK2019: unresolved external symbol _popen referenced in function _getconf_LEVEL1_DCACHE_SIZE C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\PETSc.utilities.cacheDetails\conftest.exe : fatal error LNK1120: 2 unresolved externals ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" #include #include long getconf_LEVEL1_DCACHE_SIZE() { long val=-1; FILE *f = popen("getconf LEVEL1_DCACHE_SIZE","r"); fscanf(f,"%ld",&val); pclose(f); return (16 <= val && val <= 2147483647) ? val : 32768; } int main() { FILE *output = fopen("conftestval","w"); if (!output) return 1; fprintf(output,"%ld",getconf_LEVEL1_DCACHE_SIZE()); fclose(output);; return 0; } Could not determine LEVEL1_DCACHE_SIZE, using default 32768 Popping language C Defined "LEVEL1_DCACHE_SIZE" to "32768" Pushing language C sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails/conftest.c sh: conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\PETSc.utilities.cacheDetails\conftest.c(5) : warning C4047: 'initializing' : 'FILE *' differs in levels of indirection from 'int' Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include long getconf_LEVEL1_DCACHE_LINESIZE() { long val=-1; FILE *f = popen("getconf LEVEL1_DCACHE_LINESIZE","r"); fscanf(f,"%ld",&val); pclose(f); return (16 <= val && val <= 2147483647) ? val : 32; } int main() { FILE *output = fopen("conftestval","w"); if (!output) return 1; fprintf(output,"%ld",getconf_LEVEL1_DCACHE_LINESIZE()); fclose(output);; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: conftest.obj : error LNK2019: unresolved external symbol _pclose referenced in function _getconf_LEVEL1_DCACHE_LINESIZE conftest.obj : error LNK2019: unresolved external symbol _popen referenced in function _getconf_LEVEL1_DCACHE_LINESIZE C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\PETSc.utilities.cacheDetails\conftest.exe : fatal error LNK1120: 2 unresolved externals Possible ERROR while running linker: output: conftest.obj : error LNK2019: unresolved external symbol _pclose referenced in function _getconf_LEVEL1_DCACHE_LINESIZE conftest.obj : error LNK2019: unresolved external symbol _popen referenced in function _getconf_LEVEL1_DCACHE_LINESIZE C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\PETSc.utilities.cacheDetails\conftest.exe : fatal error LNK1120: 2 unresolved externals ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" #include #include long getconf_LEVEL1_DCACHE_LINESIZE() { long val=-1; FILE *f = popen("getconf LEVEL1_DCACHE_LINESIZE","r"); fscanf(f,"%ld",&val); pclose(f); return (16 <= val && val <= 2147483647) ? val : 32; } int main() { FILE *output = fopen("conftestval","w"); if (!output) return 1; fprintf(output,"%ld",getconf_LEVEL1_DCACHE_LINESIZE()); fclose(output);; return 0; } Could not determine LEVEL1_DCACHE_LINESIZE, using default 32 Popping language C Defined "LEVEL1_DCACHE_LINESIZE" to "32" Pushing language C sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails/conftest.c sh: conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\PETSc.utilities.cacheDetails\conftest.c(5) : warning C4047: 'initializing' : 'FILE *' differs in levels of indirection from 'int' Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include long getconf_LEVEL1_DCACHE_ASSOC() { long val=-1; FILE *f = popen("getconf LEVEL1_DCACHE_ASSOC","r"); fscanf(f,"%ld",&val); pclose(f); return (0 <= val && val <= 2147483647) ? val : 2; } int main() { FILE *output = fopen("conftestval","w"); if (!output) return 1; fprintf(output,"%ld",getconf_LEVEL1_DCACHE_ASSOC()); fclose(output);; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: conftest.obj : error LNK2019: unresolved external symbol _pclose referenced in function _getconf_LEVEL1_DCACHE_ASSOC conftest.obj : error LNK2019: unresolved external symbol _popen referenced in function _getconf_LEVEL1_DCACHE_ASSOC C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\PETSc.utilities.cacheDetails\conftest.exe : fatal error LNK1120: 2 unresolved externals Possible ERROR while running linker: output: conftest.obj : error LNK2019: unresolved external symbol _pclose referenced in function _getconf_LEVEL1_DCACHE_ASSOC conftest.obj : error LNK2019: unresolved external symbol _popen referenced in function _getconf_LEVEL1_DCACHE_ASSOC C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\PETSc.utilities.cacheDetails\conftest.exe : fatal error LNK1120: 2 unresolved externals ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" #include #include long getconf_LEVEL1_DCACHE_ASSOC() { long val=-1; FILE *f = popen("getconf LEVEL1_DCACHE_ASSOC","r"); fscanf(f,"%ld",&val); pclose(f); return (0 <= val && val <= 2147483647) ? val : 2; } int main() { FILE *output = fopen("conftestval","w"); if (!output) return 1; fprintf(output,"%ld",getconf_LEVEL1_DCACHE_ASSOC()); fclose(output);; return 0; } Could not determine LEVEL1_DCACHE_ASSOC, using default 2 Popping language C Defined "LEVEL1_DCACHE_ASSOC" to "2" ================================================================================ TEST checkMemcmp from config.functions(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/functions.py:78) TESTING: checkMemcmp from config.functions(config/BuildSystem/config/functions.py:78) Check for 8-bit clean memcmp All intermediate test results are stored in /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include void exit(int); int main() { char c0 = 0x40; char c1 = (char) 0x80; char c2 = (char) 0x81; exit(memcmp(&c0, &c2, 1) < 0 && memcmp(&c1, &c2, 1) < 0 ? 0 : 1); ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: Executing: /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe sh: /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe Executing: /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe sh: ================================================================================ TEST checkSysinfo from config.functions(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/functions.py:102) TESTING: checkSysinfo from config.functions(config/BuildSystem/config/functions.py:102) Check whether sysinfo takes three arguments, and if it does define HAVE_SYSINFO_3ARG Checking for function sysinfo sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char sysinfo(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char sysinfo(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_sysinfo) || defined (__stub___sysinfo) choke me #else sysinfo(); #endif ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe not found or not built by the last incremental link; performing full link conftest.obj : error LNK2019: unresolved external symbol _sysinfo referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: output: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe not found or not built by the last incremental link; performing full link conftest.obj : error LNK2019: unresolved external symbol _sysinfo referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char sysinfo(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char sysinfo(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_sysinfo) || defined (__stub___sysinfo) choke me #else sysinfo(); #endif ; return 0; } ================================================================================ TEST checkVPrintf from config.functions(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/functions.py:125) TESTING: checkVPrintf from config.functions(config/BuildSystem/config/functions.py:125) Checks whether vprintf requires a char * last argument, and if it does defines HAVE_VPRINTF_CHAR Checking for function vprintf sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char vprintf(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char vprintf(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_vprintf) || defined (__stub___vprintf) choke me #else vprintf(); #endif ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: Defined "HAVE_VPRINTF" to "1" sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c sh: conftest.c c:\users\fraphel\appdata\local\temp\petsc-fwwje2\config.functions\conftest.c(8) : warning C4700: uninitialized local variable 'Argp' used Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include int main() { va_list Argp; vprintf( "%d", Argp ); ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe not found or not built by the last incremental link; performing full link ================================================================================ TEST checkVFPrintf from config.functions(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/functions.py:132) TESTING: checkVFPrintf from config.functions(config/BuildSystem/config/functions.py:132) Checks whether vfprintf requires a char * last argument, and if it does defines HAVE_VFPRINTF_CHAR Checking for function vfprintf sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char vfprintf(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char vfprintf(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_vfprintf) || defined (__stub___vfprintf) choke me #else vfprintf(); #endif ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe not found or not built by the last incremental link; performing full link Defined "HAVE_VFPRINTF" to "1" sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c sh: conftest.c c:\users\fraphel\appdata\local\temp\petsc-fwwje2\config.functions\conftest.c(8) : warning C4700: uninitialized local variable 'Argp' used Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include int main() { va_list Argp; vfprintf(stdout, "%d", Argp ); ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe not found or not built by the last incremental link; performing full link ================================================================================ TEST checkVSNPrintf from config.functions(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/functions.py:139) TESTING: checkVSNPrintf from config.functions(config/BuildSystem/config/functions.py:139) Checks whether vsnprintf requires a char * last argument, and if it does defines HAVE_VSNPRINTF_CHAR Checking for function _vsnprintf sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _vsnprintf(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _vsnprintf(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__vsnprintf) || defined (__stub____vsnprintf) choke me #else _vsnprintf(); #endif ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe not found or not built by the last incremental link; performing full link Defined "HAVE__VSNPRINTF" to "1" Pushing language Cxx sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -Zm200 -TP /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.cc Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -Zm200 -TP /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.cc sh: conftest.cc c:\users\fraphel\appdata\local\temp\petsc-fwwje2\config.functions\conftest.cc(8) : warning C4700: uninitialized local variable 'Argp' used Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include int main() { va_list Argp;char str[6]; _vsnprintf(str,5, "%d", Argp ); ; return 0; } Pushing language CXX Popping language CXX sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -Zm200 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -Zm200 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe not found or not built by the last incremental link; performing full link Popping language Cxx ================================================================================ TEST checkNanosleep from config.functions(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/functions.py:183) TESTING: checkNanosleep from config.functions(config/BuildSystem/config/functions.py:183) Check for functional nanosleep() - as time.h behaves differently for different compiler flags - like -std=c89 sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c sh: conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.c(6) : error C2079: 'tp' uses undefined struct 'timespec' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.c(7) : error C2224: left of '.tv_sec' must have struct/union type C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.c(8) : error C2224: left of '.tv_nsec' must have struct/union type Possible ERROR while running compiler: conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.c(6) : error C2079: 'tp' uses undefined struct 'timespec' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.c(7) : error C2224: left of '.tv_sec' must have struct/union type C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.c(8) : error C2224: left of '.tv_nsec' must have struct/union type ret = 512 Source: #include "confdefs.h" #include "conffix.h" #include int main() { struct timespec tp; tp.tv_sec = 0; tp.tv_nsec = (long)(1e9); nanosleep(&tp,0); ; return 0; } Compile failed inside link ================================================================================ TEST checkSignalHandlerType from config.functions(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/functions.py:159) TESTING: checkSignalHandlerType from config.functions(config/BuildSystem/config/functions.py:159) Checks the type of C++ signals handlers, and defines SIGNAL_CAST to the correct value Pushing language Cxx sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -Zm200 -TP /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.cc Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -Zm200 -TP /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.cc sh: conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include static void myhandler(int sig) {} int main() { signal(SIGFPE,myhandler); ; return 0; } Pushing language CXX Popping language CXX sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -Zm200 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -Zm200 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe not found or not built by the last incremental link; performing full link Defined "SIGNAL_CAST" to " " Popping language Cxx ================================================================================ TEST checkFreeReturnType from config.functions(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/functions.py:169) TESTING: checkFreeReturnType from config.functions(config/BuildSystem/config/functions.py:169) Checks whether free returns void or int, and defines HAVE_FREE_RETURN_INT sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c sh: conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.c(6) : error C2120: 'void' illegal with all types Possible ERROR while running compiler: conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.c(6) : error C2120: 'void' illegal with all types ret = 512 Source: #include "confdefs.h" #include "conffix.h" #include int main() { int ierr; void *p; ierr = free(p); return 0; ; return 0; } Compile failed inside link ================================================================================ TEST checkVariableArgumentLists from config.functions(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/functions.py:175) TESTING: checkVariableArgumentLists from config.functions(config/BuildSystem/config/functions.py:175) Checks whether the variable argument list functionality is working sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c sh: conftest.c c:\users\fraphel\appdata\local\temp\petsc-fwwje2\config.functions\conftest.c(7) : warning C4700: uninitialized local variable 'l2' used c:\users\fraphel\appdata\local\temp\petsc-fwwje2\config.functions\conftest.c(7) : warning C4700: uninitialized local variable 'l1' used Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { va_list l1, l2; va_copy(l1, l2); return 0; ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe not found or not built by the last incremental link; performing full link conftest.obj : error LNK2019: unresolved external symbol _va_copy referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: output: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe not found or not built by the last incremental link; performing full link conftest.obj : error LNK2019: unresolved external symbol _va_copy referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" #include int main() { va_list l1, l2; va_copy(l1, l2); return 0; ; return 0; } sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c sh: conftest.c c:\users\fraphel\appdata\local\temp\petsc-fwwje2\config.functions\conftest.c(7) : warning C4700: uninitialized local variable 'l2' used c:\users\fraphel\appdata\local\temp\petsc-fwwje2\config.functions\conftest.c(7) : warning C4700: uninitialized local variable 'l1' used Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { va_list l1, l2; __va_copy(l1, l2); return 0; ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: conftest.obj : error LNK2019: unresolved external symbol ___va_copy referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: output: conftest.obj : error LNK2019: unresolved external symbol ___va_copy referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" #include int main() { va_list l1, l2; __va_copy(l1, l2); return 0; ; return 0; } ================================================================================ TEST check from config.functions(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function rand sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char rand(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char rand(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_rand) || defined (__stub___rand) choke me #else rand(); #endif ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: Defined "HAVE_RAND" to "1" ================================================================================ TEST check from config.functions(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function getdomainname sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char getdomainname(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char getdomainname(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_getdomainname) || defined (__stub___getdomainname) choke me #else getdomainname(); #endif ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe not found or not built by the last incremental link; performing full link conftest.obj : error LNK2019: unresolved external symbol _getdomainname referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: output: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe not found or not built by the last incremental link; performing full link conftest.obj : error LNK2019: unresolved external symbol _getdomainname referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char getdomainname(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char getdomainname(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_getdomainname) || defined (__stub___getdomainname) choke me #else getdomainname(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function _sleep sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _sleep(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _sleep(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__sleep) || defined (__stub____sleep) choke me #else _sleep(); #endif ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: Defined "HAVE__SLEEP" to "1" ================================================================================ TEST check from config.functions(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function snprintf sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char snprintf(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char snprintf(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_snprintf) || defined (__stub___snprintf) choke me #else snprintf(); #endif ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe not found or not built by the last incremental link; performing full link conftest.obj : error LNK2019: unresolved external symbol _snprintf referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: output: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe not found or not built by the last incremental link; performing full link conftest.obj : error LNK2019: unresolved external symbol _snprintf referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char snprintf(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char snprintf(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_snprintf) || defined (__stub___snprintf) choke me #else snprintf(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function realpath sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char realpath(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char realpath(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_realpath) || defined (__stub___realpath) choke me #else realpath(); #endif ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: conftest.obj : error LNK2019: unresolved external symbol _realpath referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: output: conftest.obj : error LNK2019: unresolved external symbol _realpath referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char realpath(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char realpath(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_realpath) || defined (__stub___realpath) choke me #else realpath(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function dlsym sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char dlsym(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char dlsym(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_dlsym) || defined (__stub___dlsym) choke me #else dlsym(); #endif ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: conftest.obj : error LNK2019: unresolved external symbol _dlsym referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: output: conftest.obj : error LNK2019: unresolved external symbol _dlsym referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char dlsym(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char dlsym(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_dlsym) || defined (__stub___dlsym) choke me #else dlsym(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function bzero sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char bzero(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char bzero(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_bzero) || defined (__stub___bzero) choke me #else bzero(); #endif ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: conftest.obj : error LNK2019: unresolved external symbol _bzero referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: output: conftest.obj : error LNK2019: unresolved external symbol _bzero referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char bzero(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char bzero(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_bzero) || defined (__stub___bzero) choke me #else bzero(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function _getcwd sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _getcwd(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _getcwd(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__getcwd) || defined (__stub____getcwd) choke me #else _getcwd(); #endif ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: Defined "HAVE__GETCWD" to "1" ================================================================================ TEST check from config.functions(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function getwd sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char getwd(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char getwd(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_getwd) || defined (__stub___getwd) choke me #else getwd(); #endif ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe not found or not built by the last incremental link; performing full link conftest.obj : error LNK2019: unresolved external symbol _getwd referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: output: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe not found or not built by the last incremental link; performing full link conftest.obj : error LNK2019: unresolved external symbol _getwd referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char getwd(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char getwd(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_getwd) || defined (__stub___getwd) choke me #else getwd(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function uname sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char uname(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char uname(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_uname) || defined (__stub___uname) choke me #else uname(); #endif ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: conftest.obj : error LNK2019: unresolved external symbol _uname referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: output: conftest.obj : error LNK2019: unresolved external symbol _uname referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char uname(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char uname(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_uname) || defined (__stub___uname) choke me #else uname(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function _lseek sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _lseek(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _lseek(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__lseek) || defined (__stub____lseek) choke me #else _lseek(); #endif ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: Defined "HAVE__LSEEK" to "1" ================================================================================ TEST check from config.functions(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function sleep sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char sleep(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char sleep(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_sleep) || defined (__stub___sleep) choke me #else sleep(); #endif ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe not found or not built by the last incremental link; performing full link conftest.obj : error LNK2019: unresolved external symbol _sleep referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: output: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe not found or not built by the last incremental link; performing full link conftest.obj : error LNK2019: unresolved external symbol _sleep referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char sleep(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char sleep(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_sleep) || defined (__stub___sleep) choke me #else sleep(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function _access sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _access(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _access(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__access) || defined (__stub____access) choke me #else _access(); #endif ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: Defined "HAVE__ACCESS" to "1" ================================================================================ TEST check from config.functions(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function lseek sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char lseek(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char lseek(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_lseek) || defined (__stub___lseek) choke me #else lseek(); #endif ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe not found or not built by the last incremental link; performing full link Defined "HAVE_LSEEK" to "1" ================================================================================ TEST check from config.functions(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function usleep sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char usleep(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char usleep(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_usleep) || defined (__stub___usleep) choke me #else usleep(); #endif ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe not found or not built by the last incremental link; performing full link conftest.obj : error LNK2019: unresolved external symbol _usleep referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: output: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe not found or not built by the last incremental link; performing full link conftest.obj : error LNK2019: unresolved external symbol _usleep referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char usleep(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char usleep(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_usleep) || defined (__stub___usleep) choke me #else usleep(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function _intel_fast_memset sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _intel_fast_memset(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _intel_fast_memset(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__intel_fast_memset) || defined (__stub____intel_fast_memset) choke me #else _intel_fast_memset(); #endif ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: conftest.obj : error LNK2019: unresolved external symbol __intel_fast_memset referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: output: conftest.obj : error LNK2019: unresolved external symbol __intel_fast_memset referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _intel_fast_memset(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _intel_fast_memset(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__intel_fast_memset) || defined (__stub____intel_fast_memset) choke me #else _intel_fast_memset(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function dlclose sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char dlclose(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char dlclose(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_dlclose) || defined (__stub___dlclose) choke me #else dlclose(); #endif ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: conftest.obj : error LNK2019: unresolved external symbol _dlclose referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: output: conftest.obj : error LNK2019: unresolved external symbol _dlclose referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char dlclose(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char dlclose(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_dlclose) || defined (__stub___dlclose) choke me #else dlclose(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function gethostname sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char gethostname(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char gethostname(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_gethostname) || defined (__stub___gethostname) choke me #else gethostname(); #endif ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: conftest.obj : error LNK2019: unresolved external symbol _gethostname referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: output: conftest.obj : error LNK2019: unresolved external symbol _gethostname referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char gethostname(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char gethostname(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_gethostname) || defined (__stub___gethostname) choke me #else gethostname(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function clock sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char clock(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char clock(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_clock) || defined (__stub___clock) choke me #else clock(); #endif ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: Defined "HAVE_CLOCK" to "1" ================================================================================ TEST check from config.functions(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function get_nprocs sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char get_nprocs(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char get_nprocs(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_get_nprocs) || defined (__stub___get_nprocs) choke me #else get_nprocs(); #endif ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe not found or not built by the last incremental link; performing full link conftest.obj : error LNK2019: unresolved external symbol _get_nprocs referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: output: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe not found or not built by the last incremental link; performing full link conftest.obj : error LNK2019: unresolved external symbol _get_nprocs referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char get_nprocs(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char get_nprocs(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_get_nprocs) || defined (__stub___get_nprocs) choke me #else get_nprocs(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function access sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char access(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char access(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_access) || defined (__stub___access) choke me #else access(); #endif ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: Defined "HAVE_ACCESS" to "1" ================================================================================ TEST check from config.functions(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function _snprintf sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _snprintf(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _snprintf(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__snprintf) || defined (__stub____snprintf) choke me #else _snprintf(); #endif ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe not found or not built by the last incremental link; performing full link Defined "HAVE__SNPRINTF" to "1" ================================================================================ TEST check from config.functions(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function dlerror sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char dlerror(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char dlerror(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_dlerror) || defined (__stub___dlerror) choke me #else dlerror(); #endif ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe not found or not built by the last incremental link; performing full link conftest.obj : error LNK2019: unresolved external symbol _dlerror referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: output: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe not found or not built by the last incremental link; performing full link conftest.obj : error LNK2019: unresolved external symbol _dlerror referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char dlerror(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char dlerror(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_dlerror) || defined (__stub___dlerror) choke me #else dlerror(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function mkstemp sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char mkstemp(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char mkstemp(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_mkstemp) || defined (__stub___mkstemp) choke me #else mkstemp(); #endif ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: conftest.obj : error LNK2019: unresolved external symbol _mkstemp referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: output: conftest.obj : error LNK2019: unresolved external symbol _mkstemp referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char mkstemp(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char mkstemp(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_mkstemp) || defined (__stub___mkstemp) choke me #else mkstemp(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function fork sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char fork(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char fork(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_fork) || defined (__stub___fork) choke me #else fork(); #endif ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: conftest.obj : error LNK2019: unresolved external symbol _fork referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: output: conftest.obj : error LNK2019: unresolved external symbol _fork referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char fork(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char fork(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_fork) || defined (__stub___fork) choke me #else fork(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function getpagesize sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char getpagesize(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char getpagesize(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_getpagesize) || defined (__stub___getpagesize) choke me #else getpagesize(); #endif ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: conftest.obj : error LNK2019: unresolved external symbol _getpagesize referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: output: conftest.obj : error LNK2019: unresolved external symbol _getpagesize referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char getpagesize(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char getpagesize(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_getpagesize) || defined (__stub___getpagesize) choke me #else getpagesize(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function sbreak sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char sbreak(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char sbreak(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_sbreak) || defined (__stub___sbreak) choke me #else sbreak(); #endif ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: conftest.obj : error LNK2019: unresolved external symbol _sbreak referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: output: conftest.obj : error LNK2019: unresolved external symbol _sbreak referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char sbreak(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char sbreak(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_sbreak) || defined (__stub___sbreak) choke me #else sbreak(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function memalign sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char memalign(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char memalign(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_memalign) || defined (__stub___memalign) choke me #else memalign(); #endif ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: conftest.obj : error LNK2019: unresolved external symbol _memalign referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: output: conftest.obj : error LNK2019: unresolved external symbol _memalign referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char memalign(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char memalign(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_memalign) || defined (__stub___memalign) choke me #else memalign(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function sigset sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char sigset(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char sigset(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_sigset) || defined (__stub___sigset) choke me #else sigset(); #endif ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: conftest.obj : error LNK2019: unresolved external symbol _sigset referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: output: conftest.obj : error LNK2019: unresolved external symbol _sigset referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char sigset(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char sigset(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_sigset) || defined (__stub___sigset) choke me #else sigset(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function getcwd sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char getcwd(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char getcwd(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_getcwd) || defined (__stub___getcwd) choke me #else getcwd(); #endif ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: Defined "HAVE_GETCWD" to "1" ================================================================================ TEST check from config.functions(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function gethostbyname sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char gethostbyname(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char gethostbyname(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_gethostbyname) || defined (__stub___gethostbyname) choke me #else gethostbyname(); #endif ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe not found or not built by the last incremental link; performing full link conftest.obj : error LNK2019: unresolved external symbol _gethostbyname referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: output: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe not found or not built by the last incremental link; performing full link conftest.obj : error LNK2019: unresolved external symbol _gethostbyname referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char gethostbyname(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char gethostbyname(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_gethostbyname) || defined (__stub___gethostbyname) choke me #else gethostbyname(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function gettimeofday sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char gettimeofday(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char gettimeofday(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_gettimeofday) || defined (__stub___gettimeofday) choke me #else gettimeofday(); #endif ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: conftest.obj : error LNK2019: unresolved external symbol _gettimeofday referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: output: conftest.obj : error LNK2019: unresolved external symbol _gettimeofday referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char gettimeofday(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char gettimeofday(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_gettimeofday) || defined (__stub___gettimeofday) choke me #else gettimeofday(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function readlink sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char readlink(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char readlink(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_readlink) || defined (__stub___readlink) choke me #else readlink(); #endif ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: conftest.obj : error LNK2019: unresolved external symbol _readlink referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: output: conftest.obj : error LNK2019: unresolved external symbol _readlink referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char readlink(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char readlink(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_readlink) || defined (__stub___readlink) choke me #else readlink(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function PXFGETARG sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char PXFGETARG(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char PXFGETARG(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_PXFGETARG) || defined (__stub___PXFGETARG) choke me #else PXFGETARG(); #endif ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: conftest.obj : error LNK2019: unresolved external symbol _PXFGETARG referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: output: conftest.obj : error LNK2019: unresolved external symbol _PXFGETARG referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char PXFGETARG(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char PXFGETARG(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_PXFGETARG) || defined (__stub___PXFGETARG) choke me #else PXFGETARG(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function sigaction sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char sigaction(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char sigaction(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_sigaction) || defined (__stub___sigaction) choke me #else sigaction(); #endif ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: conftest.obj : error LNK2019: unresolved external symbol _sigaction referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: output: conftest.obj : error LNK2019: unresolved external symbol _sigaction referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char sigaction(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char sigaction(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_sigaction) || defined (__stub___sigaction) choke me #else sigaction(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function strcasecmp sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char strcasecmp(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char strcasecmp(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_strcasecmp) || defined (__stub___strcasecmp) choke me #else strcasecmp(); #endif ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: conftest.obj : error LNK2019: unresolved external symbol _strcasecmp referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: output: conftest.obj : error LNK2019: unresolved external symbol _strcasecmp referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char strcasecmp(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char strcasecmp(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_strcasecmp) || defined (__stub___strcasecmp) choke me #else strcasecmp(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function dlopen sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char dlopen(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char dlopen(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_dlopen) || defined (__stub___dlopen) choke me #else dlopen(); #endif ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: conftest.obj : error LNK2019: unresolved external symbol _dlopen referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: output: conftest.obj : error LNK2019: unresolved external symbol _dlopen referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char dlopen(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char dlopen(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_dlopen) || defined (__stub___dlopen) choke me #else dlopen(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function drand48 sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char drand48(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char drand48(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_drand48) || defined (__stub___drand48) choke me #else drand48(); #endif ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: conftest.obj : error LNK2019: unresolved external symbol _drand48 referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: output: conftest.obj : error LNK2019: unresolved external symbol _drand48 referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char drand48(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char drand48(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_drand48) || defined (__stub___drand48) choke me #else drand48(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function socket sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char socket(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char socket(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_socket) || defined (__stub___socket) choke me #else socket(); #endif ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: conftest.obj : error LNK2019: unresolved external symbol _socket referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: output: conftest.obj : error LNK2019: unresolved external symbol _socket referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char socket(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char socket(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_socket) || defined (__stub___socket) choke me #else socket(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function memmove sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char memmove(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char memmove(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_memmove) || defined (__stub___memmove) choke me #else memmove(); #endif ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: Defined "HAVE_MEMMOVE" to "1" ================================================================================ TEST check from config.functions(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function signal sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char signal(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char signal(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_signal) || defined (__stub___signal) choke me #else signal(); #endif ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe not found or not built by the last incremental link; performing full link Defined "HAVE_SIGNAL" to "1" ================================================================================ TEST check from config.functions(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function popen sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char popen(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char popen(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_popen) || defined (__stub___popen) choke me #else popen(); #endif ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe not found or not built by the last incremental link; performing full link conftest.obj : error LNK2019: unresolved external symbol _popen referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: output: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe not found or not built by the last incremental link; performing full link conftest.obj : error LNK2019: unresolved external symbol _popen referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char popen(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char popen(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_popen) || defined (__stub___popen) choke me #else popen(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function getrusage sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char getrusage(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char getrusage(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_getrusage) || defined (__stub___getrusage) choke me #else getrusage(); #endif ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: conftest.obj : error LNK2019: unresolved external symbol _getrusage referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: output: conftest.obj : error LNK2019: unresolved external symbol _getrusage referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char getrusage(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char getrusage(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_getrusage) || defined (__stub___getrusage) choke me #else getrusage(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function times sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char times(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char times(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_times) || defined (__stub___times) choke me #else times(); #endif ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: conftest.obj : error LNK2019: unresolved external symbol _times referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: output: conftest.obj : error LNK2019: unresolved external symbol _times referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char times(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char times(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_times) || defined (__stub___times) choke me #else times(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function _intel_fast_memcpy sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _intel_fast_memcpy(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _intel_fast_memcpy(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__intel_fast_memcpy) || defined (__stub____intel_fast_memcpy) choke me #else _intel_fast_memcpy(); #endif ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: conftest.obj : error LNK2019: unresolved external symbol __intel_fast_memcpy referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: output: conftest.obj : error LNK2019: unresolved external symbol __intel_fast_memcpy referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _intel_fast_memcpy(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _intel_fast_memcpy(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__intel_fast_memcpy) || defined (__stub____intel_fast_memcpy) choke me #else _intel_fast_memcpy(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function time sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char time(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char time(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_time) || defined (__stub___time) choke me #else time(); #endif ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: Defined "HAVE_TIME" to "1" ================================================================================ TEST check from config.functions(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function sysctlbyname sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char sysctlbyname(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char sysctlbyname(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_sysctlbyname) || defined (__stub___sysctlbyname) choke me #else sysctlbyname(); #endif ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe not found or not built by the last incremental link; performing full link conftest.obj : error LNK2019: unresolved external symbol _sysctlbyname referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: output: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe not found or not built by the last incremental link; performing full link conftest.obj : error LNK2019: unresolved external symbol _sysctlbyname referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char sysctlbyname(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char sysctlbyname(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_sysctlbyname) || defined (__stub___sysctlbyname) choke me #else sysctlbyname(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function stricmp sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char stricmp(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char stricmp(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_stricmp) || defined (__stub___stricmp) choke me #else stricmp(); #endif ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: Defined "HAVE_STRICMP" to "1" ================================================================================ TEST configureMemorySize from PETSc.utilities.getResidentSetSize(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/PETSc/utilities/getResidentSetSize.py:31) TESTING: configureMemorySize from PETSc.utilities.getResidentSetSize(config/PETSc/utilities/getResidentSetSize.py:31) Try to determine how to measure the memory usage Defined "USE_PROC_FOR_SIZE" to "1" Using /proc for PetscMemoryGetCurrentUsage() ================================================================================ TEST configureFPTrap from PETSc.utilities.FPTrap(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/PETSc/utilities/FPTrap.py:27) TESTING: configureFPTrap from PETSc.utilities.FPTrap(config/PETSc/utilities/FPTrap.py:27) Checking the handling of floating point traps Checking for header: sigfpe.h sh: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c Executing: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c sh: conftest.c #line 1 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 7 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 11 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 15 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 19 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 23 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 27 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 31 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 35 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 39 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 43 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 47 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 51 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 55 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 59 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 63 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 67 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 71 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 75 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 79 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 83 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 87 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 91 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 95 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 99 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 103 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 107 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 111 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 115 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 119 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 123 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 127 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 131 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 135 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 139 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 143 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 147 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 151 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 155 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 159 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 163 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 167 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 171 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 175 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 179 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 183 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 187 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 191 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 195 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 199 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 203 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 207 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 209 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 2 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 8 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 9 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 10 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 3 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.headers\conftest.c(3) : fatal error C1083: Cannot open include file: 'sigfpe.h': No such file or directory Possible ERROR while running preprocessor: ret = 512 Source: #include "confdefs.h" #include "conffix.h" #include Checking for header: fpxcp.h sh: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c Executing: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c sh: conftest.c #line 1 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 7 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 11 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 15 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 19 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 23 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 27 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 31 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 35 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 39 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 43 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 47 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 51 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 55 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 59 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 63 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 67 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 71 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 75 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 79 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 83 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 87 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 91 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 95 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 99 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 103 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 107 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 111 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 115 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 119 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 123 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 127 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 131 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 135 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 139 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 143 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 147 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 151 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 155 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 159 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 163 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 167 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 171 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 175 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 179 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 183 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 187 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 191 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 195 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 199 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 203 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 207 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 209 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 2 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 8 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 9 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 10 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 3 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.headers\conftest.c(3) : fatal error C1083: Cannot open include file: 'fpxcp.h': No such file or directory Possible ERROR while running preprocessor: ret = 512 Source: #include "confdefs.h" #include "conffix.h" #include Checking for header: floatingpoint.h sh: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c Executing: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c sh: conftest.c #line 1 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 7 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 11 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 15 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 19 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 23 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 27 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 31 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 35 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 39 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 43 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 47 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 51 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 55 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 59 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 63 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 67 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 71 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 75 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 79 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 83 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 87 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 91 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 95 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 99 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 103 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 107 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 111 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 115 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 119 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 123 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 127 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 131 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 135 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 139 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 143 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 147 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 151 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 155 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 159 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 163 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 167 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 171 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 175 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 179 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 183 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 187 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 191 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 195 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 199 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 203 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 207 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 209 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 2 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 8 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 9 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 10 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 3 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.headers\conftest.c(3) : fatal error C1083: Cannot open include file: 'floatingpoint.h': No such file or directory Possible ERROR while running preprocessor: ret = 512 Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST check_siginfo_t from config.types(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/types.py:46) TESTING: check_siginfo_t from config.types(config/BuildSystem/config/types.py:46) Checks if siginfo_t exists in signal.h. This check is for windows, and C89 check. Checking for type: siginfo_t All intermediate test results are stored in /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.c sh: conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.types\conftest.c(13) : error C2065: 'siginfo_t' : undeclared identifier C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.types\conftest.c(13) : error C2146: syntax error : missing ';' before identifier 'a' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.types\conftest.c(13) : error C2065: 'a' : undeclared identifier Possible ERROR while running compiler: conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.types\conftest.c(13) : error C2065: 'siginfo_t' : undeclared identifier C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.types\conftest.c(13) : error C2146: syntax error : missing ';' before identifier 'a' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.types\conftest.c(13) : error C2065: 'a' : undeclared identifier ret = 512 Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { siginfo_t a;; return 0; } siginfo_t found ================================================================================ TEST check__int64 from config.types(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/types.py:52) TESTING: check__int64 from config.types(config/BuildSystem/config/types.py:52) Checks if __int64 exists. This is primarily for windows. Checking for type: __int64 sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #endif int main() { __int64 a;; return 0; } __int64 found Defined "HAVE___INT64" to "1" ================================================================================ TEST checkSizeTypes from config.types(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/types.py:58) TESTING: checkSizeTypes from config.types(config/BuildSystem/config/types.py:58) Checks for types associated with sizes, such as size_t. Checking for type: size_t sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #endif int main() { size_t a;; return 0; } size_t found ================================================================================ TEST checkFileTypes from config.types(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/types.py:68) TESTING: checkFileTypes from config.types(config/BuildSystem/config/types.py:68) Checks for types associated with files, such as mode_t, off_t, etc. Checking for type: mode_t sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.c sh: conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.types\conftest.c(13) : error C2065: 'mode_t' : undeclared identifier C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.types\conftest.c(13) : error C2146: syntax error : missing ';' before identifier 'a' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.types\conftest.c(13) : error C2065: 'a' : undeclared identifier Possible ERROR while running compiler: conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.types\conftest.c(13) : error C2065: 'mode_t' : undeclared identifier C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.types\conftest.c(13) : error C2146: syntax error : missing ';' before identifier 'a' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.types\conftest.c(13) : error C2065: 'a' : undeclared identifier ret = 512 Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #endif int main() { mode_t a;; return 0; } Typedefed "int" to "mode_t" Checking for type: off_t sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #endif int main() { off_t a;; return 0; } off_t found ================================================================================ TEST checkIntegerTypes from config.types(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/types.py:63) TESTING: checkIntegerTypes from config.types(config/BuildSystem/config/types.py:63) Checks for types associated with integers, such as int32_t. Checking for type: int32_t sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.c sh: conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.types\conftest.c(13) : error C2065: 'int32_t' : undeclared identifier C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.types\conftest.c(13) : error C2146: syntax error : missing ';' before identifier 'a' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.types\conftest.c(13) : error C2065: 'a' : undeclared identifier Possible ERROR while running compiler: conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.types\conftest.c(13) : error C2065: 'int32_t' : undeclared identifier C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.types\conftest.c(13) : error C2146: syntax error : missing ';' before identifier 'a' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.types\conftest.c(13) : error C2065: 'a' : undeclared identifier ret = 512 Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #endif int main() { int32_t a;; return 0; } Typedefed "int" to "int32_t" ================================================================================ TEST checkPID from config.types(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/types.py:74) TESTING: checkPID from config.types(config/BuildSystem/config/types.py:74) Checks for pid_t, and defines it if necessary Checking for type: pid_t sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.c sh: conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.types\conftest.c(13) : error C2065: 'pid_t' : undeclared identifier C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.types\conftest.c(13) : error C2146: syntax error : missing ';' before identifier 'a' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.types\conftest.c(13) : error C2065: 'a' : undeclared identifier Possible ERROR while running compiler: conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.types\conftest.c(13) : error C2065: 'pid_t' : undeclared identifier C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.types\conftest.c(13) : error C2146: syntax error : missing ';' before identifier 'a' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.types\conftest.c(13) : error C2065: 'a' : undeclared identifier ret = 512 Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #endif int main() { pid_t a;; return 0; } Typedefed "int" to "pid_t" ================================================================================ TEST checkUID from config.types(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/types.py:78) TESTING: checkUID from config.types(config/BuildSystem/config/types.py:78) Checks for uid_t and gid_t, and defines them if necessary sh: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.c Executing: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.c sh: conftest.c #line 1 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.types\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.types\\confdefs.h" #line 7 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.types\\confdefs.h" #line 11 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.types\\confdefs.h" #line 15 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.types\\confdefs.h" #line 19 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.types\\confdefs.h" #line 23 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.types\\confdefs.h" #line 27 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.types\\confdefs.h" #line 31 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.types\\confdefs.h" #line 35 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.types\\confdefs.h" #line 39 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.types\\confdefs.h" #line 43 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.types\\confdefs.h" #line 47 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.types\\confdefs.h" #line 51 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.types\\confdefs.h" #line 55 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.types\\confdefs.h" #line 59 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.types\\confdefs.h" #line 63 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.types\\confdefs.h" #line 67 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.types\\confdefs.h" #line 71 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.types\\confdefs.h" #line 75 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.types\\confdefs.h" #line 79 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.types\\confdefs.h" #line 83 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.types\\confdefs.h" #line 87 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.types\\confdefs.h" #line 91 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.types\\confdefs.h" #line 95 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.types\\confdefs.h" #line 99 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.types\\confdefs.h" #line 103 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.types\\confdefs.h" #line 107 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.types\\confdefs.h" #line 111 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.types\\confdefs.h" #line 115 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.types\\confdefs.h" #line 119 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.types\\confdefs.h" #line 123 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.types\\confdefs.h" #line 127 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.types\\confdefs.h" #line 131 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.types\\confdefs.h" #line 135 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.types\\confdefs.h" #line 139 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.types\\confdefs.h" #line 143 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.types\\confdefs.h" #line 147 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.types\\confdefs.h" #line 151 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.types\\confdefs.h" #line 155 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.types\\confdefs.h" #line 159 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.types\\confdefs.h" #line 163 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.types\\confdefs.h" #line 167 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.types\\confdefs.h" #line 171 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.types\\confdefs.h" #line 175 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.types\\confdefs.h" #line 179 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.types\\confdefs.h" #line 183 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.types\\confdefs.h" #line 187 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.types\\confdefs.h" #line 191 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.types\\confdefs.h" #line 195 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.types\\confdefs.h" #line 199 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.types\\confdefs.h" #line 203 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.types\\confdefs.h" #line 207 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.types\\confdefs.h" #line 211 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.types\\confdefs.h" #line 213 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.types\\confdefs.h" #line 2 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.types\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.types\\conffix.h" typedef int int32_t; typedef int mode_t; typedef int pid_t; #line 11 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.types\\conffix.h" #line 12 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.types\\conffix.h" #line 13 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.types\\conffix.h" #line 3 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.types\\conftest.c" #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sys/types.h" #pragma once #line 18 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sys/types.h" #line 25 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sys/types.h" #line 33 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sys/types.h" #line 34 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sys/types.h" typedef __w64 long __time32_t; #line 47 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sys/types.h" typedef __int64 __time64_t; #line 52 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sys/types.h" typedef __time64_t time_t; #line 59 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sys/types.h" #line 61 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sys/types.h" typedef unsigned short _ino_t; typedef unsigned short ino_t; #line 71 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sys/types.h" #line 74 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sys/types.h" typedef unsigned int _dev_t; typedef unsigned int dev_t; #line 84 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sys/types.h" #line 87 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sys/types.h" typedef long _off_t; typedef long off_t; #line 97 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sys/types.h" #line 100 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sys/types.h" #line 102 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sys/types.h" #line 4 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.types\\conftest.c" Defined "uid_t" to "int" Defined "gid_t" to "int" ================================================================================ TEST checkSignal from config.types(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/types.py:85) TESTING: checkSignal from config.types(config/BuildSystem/config/types.py:85) Checks the return type of signal() and defines RETSIGTYPE to that type name sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #ifdef signal #undef signal #endif #ifdef __cplusplus extern "C" void (*signal (int, void(*)(int)))(int); #else void (*signal())(); #endif int main() { ; return 0; } Defined "RETSIGTYPE" to "void" ================================================================================ TEST checkC99Complex from config.types(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/types.py:106) TESTING: checkC99Complex from config.types(config/BuildSystem/config/types.py:106) Check for complex numbers in in C99 std sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.c sh: conftest.c C:\cygwin\usr\include\complex.h(21) : error C2061: syntax error : identifier 'cacos' C:\cygwin\usr\include\complex.h(21) : error C2059: syntax error : ';' C:\cygwin\usr\include\complex.h(21) : error C2059: syntax error : 'type' C:\cygwin\usr\include\complex.h(22) : error C2061: syntax error : identifier 'cacosf' C:\cygwin\usr\include\complex.h(22) : error C2059: syntax error : ';' C:\cygwin\usr\include\complex.h(22) : error C2059: syntax error : 'type' C:\cygwin\usr\include\complex.h(25) : error C2061: syntax error : identifier 'casin' C:\cygwin\usr\include\complex.h(25) : error C2059: syntax error : ';' C:\cygwin\usr\include\complex.h(25) : error C2059: syntax error : 'type' C:\cygwin\usr\include\complex.h(26) : error C2061: syntax error : identifier 'casinf' C:\cygwin\usr\include\complex.h(26) : error C2059: syntax error : ';' C:\cygwin\usr\include\complex.h(26) : error C2059: syntax error : 'type' C:\cygwin\usr\include\complex.h(29) : error C2061: syntax error : identifier 'catan' C:\cygwin\usr\include\complex.h(29) : error C2059: syntax error : ';' C:\cygwin\usr\include\complex.h(29) : error C2059: syntax error : 'type' C:\cygwin\usr\include\complex.h(30) : error C2061: syntax error : identifier 'catanf' C:\cygwin\usr\include\complex.h(30) : error C2059: syntax error : ';' C:\cygwin\usr\include\complex.h(30) : error C2059: syntax error : 'type' C:\cygwin\usr\include\complex.h(33) : error C2061: syntax error : identifier 'ccos' C:\cygwin\usr\include\complex.h(33) : error C2059: syntax error : ';' C:\cygwin\usr\include\complex.h(33) : error C2059: syntax error : 'type' C:\cygwin\usr\include\complex.h(34) : error C2061: syntax error : identifier 'ccosf' C:\cygwin\usr\include\complex.h(34) : error C2059: syntax error : ';' C:\cygwin\usr\include\complex.h(34) : error C2059: syntax error : 'type' C:\cygwin\usr\include\complex.h(37) : error C2061: syntax error : identifier 'csin' C:\cygwin\usr\include\complex.h(37) : error C2059: syntax error : ';' C:\cygwin\usr\include\complex.h(37) : error C2059: syntax error : 'type' C:\cygwin\usr\include\complex.h(38) : error C2061: syntax error : identifier 'csinf' C:\cygwin\usr\include\complex.h(38) : error C2059: syntax error : ';' C:\cygwin\usr\include\complex.h(38) : error C2059: syntax error : 'type' C:\cygwin\usr\include\complex.h(41) : error C2061: syntax error : identifier 'ctan' C:\cygwin\usr\include\complex.h(41) : error C2059: syntax error : ';' C:\cygwin\usr\include\complex.h(41) : error C2059: syntax error : 'type' C:\cygwin\usr\include\complex.h(42) : error C2061: syntax error : identifier 'ctanf' C:\cygwin\usr\include\complex.h(42) : error C2059: syntax error : ';' C:\cygwin\usr\include\complex.h(42) : error C2059: syntax error : 'type' C:\cygwin\usr\include\complex.h(46) : error C2061: syntax error : identifier 'cacosh' C:\cygwin\usr\include\complex.h(46) : error C2059: syntax error : ';' C:\cygwin\usr\include\complex.h(46) : error C2059: syntax error : 'type' C:\cygwin\usr\include\complex.h(47) : error C2061: syntax error : identifier 'cacoshf' C:\cygwin\usr\include\complex.h(47) : error C2059: syntax error : ';' C:\cygwin\usr\include\complex.h(47) : error C2059: syntax error : 'type' C:\cygwin\usr\include\complex.h(50) : error C2061: syntax error : identifier 'casinh' C:\cygwin\usr\include\complex.h(50) : error C2059: syntax error : ';' C:\cygwin\usr\include\complex.h(50) : error C2059: syntax error : 'type' C:\cygwin\usr\include\complex.h(51) : error C2061: syntax error : identifier 'casinhf' C:\cygwin\usr\include\complex.h(51) : error C2059: syntax error : ';' C:\cygwin\usr\include\complex.h(51) : error C2059: syntax error : 'type' C:\cygwin\usr\include\complex.h(54) : error C2061: syntax error : identifier 'catanh' C:\cygwin\usr\include\complex.h(54) : error C2059: syntax error : ';' C:\cygwin\usr\include\complex.h(54) : error C2059: syntax error : 'type' C:\cygwin\usr\include\complex.h(55) : error C2061: syntax error : identifier 'catanhf' C:\cygwin\usr\include\complex.h(55) : error C2059: syntax error : ';' C:\cygwin\usr\include\complex.h(55) : error C2059: syntax error : 'type' C:\cygwin\usr\include\complex.h(58) : error C2061: syntax error : identifier 'ccosh' C:\cygwin\usr\include\complex.h(58) : error C2059: syntax error : ';' C:\cygwin\usr\include\complex.h(58) : error C2059: syntax error : 'type' C:\cygwin\usr\include\complex.h(59) : error C2061: syntax error : identifier 'ccoshf' C:\cygwin\usr\include\complex.h(59) : error C2059: syntax error : ';' C:\cygwin\usr\include\complex.h(59) : error C2059: syntax error : 'type' C:\cygwin\usr\include\complex.h(62) : error C2061: syntax error : identifier 'csinh' C:\cygwin\usr\include\complex.h(62) : error C2059: syntax error : ';' C:\cygwin\usr\include\complex.h(62) : error C2059: syntax error : 'type' C:\cygwin\usr\include\complex.h(63) : error C2061: syntax error : identifier 'csinhf' C:\cygwin\usr\include\complex.h(63) : error C2059: syntax error : ';' C:\cygwin\usr\include\complex.h(63) : error C2059: syntax error : 'type' C:\cygwin\usr\include\complex.h(66) : error C2061: syntax error : identifier 'ctanh' C:\cygwin\usr\include\complex.h(66) : error C2059: syntax error : ';' C:\cygwin\usr\include\complex.h(66) : error C2059: syntax error : 'type' C:\cygwin\usr\include\complex.h(67) : error C2061: syntax error : identifier 'ctanhf' C:\cygwin\usr\include\complex.h(67) : error C2059: syntax error : ';' C:\cygwin\usr\include\complex.h(67) : error C2059: syntax error : 'type' C:\cygwin\usr\include\complex.h(71) : error C2061: syntax error : identifier 'cexp' C:\cygwin\usr\include\complex.h(71) : error C2059: syntax error : ';' C:\cygwin\usr\include\complex.h(71) : error C2059: syntax error : 'type' C:\cygwin\usr\include\complex.h(72) : error C2061: syntax error : identifier 'cexpf' C:\cygwin\usr\include\complex.h(72) : error C2059: syntax error : ';' C:\cygwin\usr\include\complex.h(72) : error C2059: syntax error : 'type' C:\cygwin\usr\include\complex.h(75) : error C2061: syntax error : identifier 'clog' C:\cygwin\usr\include\complex.h(75) : error C2059: syntax error : ';' C:\cygwin\usr\include\complex.h(75) : error C2059: syntax error : 'type' C:\cygwin\usr\include\complex.h(76) : error C2061: syntax error : identifier 'clogf' C:\cygwin\usr\include\complex.h(76) : error C2059: syntax error : ';' C:\cygwin\usr\include\complex.h(76) : error C2059: syntax error : 'type' C:\cygwin\usr\include\complex.h(90) : error C2061: syntax error : identifier 'cpow' C:\cygwin\usr\include\complex.h(90) : error C2059: syntax error : ';' C:\cygwin\usr\include\complex.h(90) : error C2059: syntax error : 'type' C:\cygwin\usr\include\complex.h(91) : error C2061: syntax error : identifier 'cpowf' C:\cygwin\usr\include\complex.h(91) : error C2059: syntax error : ';' C:\cygwin\usr\include\complex.h(91) : error C2059: syntax error : 'type' C:\cygwin\usr\include\complex.h(94) : error C2061: syntax error : identifier 'csqrt' C:\cygwin\usr\include\complex.h(94) : error C2059: syntax error : ';' C:\cygwin\usr\include\complex.h(94) : error C2059: syntax error : 'type' C:\cygwin\usr\include\complex.h(95) : error C2061: syntax error : identifier 'csqrtf' C:\cygwin\usr\include\complex.h(95) : error C2059: syntax error : ';' C:\cygwin\usr\include\complex.h(95) : error C2059: syntax error : 'type' C:\cygwin\usr\include\complex.h(108) : error C2061: syntax error : identifier 'conj' C:\cygwin\usr\include\complex.h(108) : error C2059: syntax error : ';' C:\cygwin\usr\include\complex.h(108) : error C2059: syntax error : 'type' C:\cygwin\usr\include\complex.h(109) : error C2061: syntax error : identifier 'conjf' C:\cygwin\usr\include\complex.h(109) : error C2059: syntax error : ';' C:\cygwin\usr\include\complex.h(109) : fatal error C1003: error count exceeds 100; stopping compilation Possible ERROR while running compiler: conftest.c C:\cygwin\usr\include\complex.h(21) : error C2061: syntax error : identifier 'cacos' C:\cygwin\usr\include\complex.h(21) : error C2059: syntax error : ';' C:\cygwin\usr\include\complex.h(21) : error C2059: syntax error : 'type' C:\cygwin\usr\include\complex.h(22) : error C2061: syntax error : identifier 'cacosf' C:\cygwin\usr\include\complex.h(22) : error C2059: syntax error : ';' C:\cygwin\usr\include\complex.h(22) : error C2059: syntax error : 'type' C:\cygwin\usr\include\complex.h(25) : error C2061: syntax error : identifier 'casin' C:\cygwin\usr\include\complex.h(25) : error C2059: syntax error : ';' C:\cygwin\usr\include\complex.h(25) : error C2059: syntax error : 'type' C:\cygwin\usr\include\complex.h(26) : error C2061: syntax error : identifier 'casinf' C:\cygwin\usr\include\complex.h(26) : error C2059: syntax error : ';' C:\cygwin\usr\include\complex.h(26) : error C2059: syntax error : 'type' C:\cygwin\usr\include\complex.h(29) : error C2061: syntax error : identifier 'catan' C:\cygwin\usr\include\complex.h(29) : error C2059: syntax error : ';' C:\cygwin\usr\include\complex.h(29) : error C2059: syntax error : 'type' C:\cygwin\usr\include\complex.h(30) : error C2061: syntax error : identifier 'catanf' C:\cygwin\usr\include\complex.h(30) : error C2059: syntax error : ';' C:\cygwin\usr\include\complex.h(30) : error C2059: syntax error : 'type' C:\cygwin\usr\include\complex.h(33) : error C2061: syntax error : identifier 'ccos' C:\cygwin\usr\include\complex.h(33) : error C2059: syntax error : ';' C:\cygwin\usr\include\complex.h(33) : error C2059: syntax error : 'type' C:\cygwin\usr\include\complex.h(34) : error C2061: syntax error : identifier 'ccosf' C:\cygwin\usr\include\complex.h(34) : error C2059: syntax error : ';' C:\cygwin\usr\include\complex.h(34) : error C2059: syntax error : 'type' C:\cygwin\usr\include\complex.h(37) : error C2061: syntax error : identifier 'csin' C:\cygwin\usr\include\complex.h(37) : error C2059: syntax error : ';' C:\cygwin\usr\include\complex.h(37) : error C2059: syntax error : 'type' C:\cygwin\usr\include\complex.h(38) : error C2061: syntax error : identifier 'csinf' C:\cygwin\usr\include\complex.h(38) : error C2059: syntax error : ';' C:\cygwin\usr\include\complex.h(38) : error C2059: syntax error : 'type' C:\cygwin\usr\include\complex.h(41) : error C2061: syntax error : identifier 'ctan' C:\cygwin\usr\include\complex.h(41) : error C2059: syntax error : ';' C:\cygwin\usr\include\complex.h(41) : error C2059: syntax error : 'type' C:\cygwin\usr\include\complex.h(42) : error C2061: syntax error : identifier 'ctanf' C:\cygwin\usr\include\complex.h(42) : error C2059: syntax error : ';' C:\cygwin\usr\include\complex.h(42) : error C2059: syntax error : 'type' C:\cygwin\usr\include\complex.h(46) : error C2061: syntax error : identifier 'cacosh' C:\cygwin\usr\include\complex.h(46) : error C2059: syntax error : ';' C:\cygwin\usr\include\complex.h(46) : error C2059: syntax error : 'type' C:\cygwin\usr\include\complex.h(47) : error C2061: syntax error : identifier 'cacoshf' C:\cygwin\usr\include\complex.h(47) : error C2059: syntax error : ';' C:\cygwin\usr\include\complex.h(47) : error C2059: syntax error : 'type' C:\cygwin\usr\include\complex.h(50) : error C2061: syntax error : identifier 'casinh' C:\cygwin\usr\include\complex.h(50) : error C2059: syntax error : ';' C:\cygwin\usr\include\complex.h(50) : error C2059: syntax error : 'type' C:\cygwin\usr\include\complex.h(51) : error C2061: syntax error : identifier 'casinhf' C:\cygwin\usr\include\complex.h(51) : error C2059: syntax error : ';' C:\cygwin\usr\include\complex.h(51) : error C2059: syntax error : 'type' C:\cygwin\usr\include\complex.h(54) : error C2061: syntax error : identifier 'catanh' C:\cygwin\usr\include\complex.h(54) : error C2059: syntax error : ';' C:\cygwin\usr\include\complex.h(54) : error C2059: syntax error : 'type' C:\cygwin\usr\include\complex.h(55) : error C2061: syntax error : identifier 'catanhf' C:\cygwin\usr\include\complex.h(55) : error C2059: syntax error : ';' C:\cygwin\usr\include\complex.h(55) : error C2059: syntax error : 'type' C:\cygwin\usr\include\complex.h(58) : error C2061: syntax error : identifier 'ccosh' C:\cygwin\usr\include\complex.h(58) : error C2059: syntax error : ';' C:\cygwin\usr\include\complex.h(58) : error C2059: syntax error : 'type' C:\cygwin\usr\include\complex.h(59) : error C2061: syntax error : identifier 'ccoshf' C:\cygwin\usr\include\complex.h(59) : error C2059: syntax error : ';' C:\cygwin\usr\include\complex.h(59) : error C2059: syntax error : 'type' C:\cygwin\usr\include\complex.h(62) : error C2061: syntax error : identifier 'csinh' C:\cygwin\usr\include\complex.h(62) : error C2059: syntax error : ';' C:\cygwin\usr\include\complex.h(62) : error C2059: syntax error : 'type' C:\cygwin\usr\include\complex.h(63) : error C2061: syntax error : identifier 'csinhf' C:\cygwin\usr\include\complex.h(63) : error C2059: syntax error : ';' C:\cygwin\usr\include\complex.h(63) : error C2059: syntax error : 'type' C:\cygwin\usr\include\complex.h(66) : error C2061: syntax error : identifier 'ctanh' C:\cygwin\usr\include\complex.h(66) : error C2059: syntax error : ';' C:\cygwin\usr\include\complex.h(66) : error C2059: syntax error : 'type' C:\cygwin\usr\include\complex.h(67) : error C2061: syntax error : identifier 'ctanhf' C:\cygwin\usr\include\complex.h(67) : error C2059: syntax error : ';' C:\cygwin\usr\include\complex.h(67) : error C2059: syntax error : 'type' C:\cygwin\usr\include\complex.h(71) : error C2061: syntax error : identifier 'cexp' C:\cygwin\usr\include\complex.h(71) : error C2059: syntax error : ';' C:\cygwin\usr\include\complex.h(71) : error C2059: syntax error : 'type' C:\cygwin\usr\include\complex.h(72) : error C2061: syntax error : identifier 'cexpf' C:\cygwin\usr\include\complex.h(72) : error C2059: syntax error : ';' C:\cygwin\usr\include\complex.h(72) : error C2059: syntax error : 'type' C:\cygwin\usr\include\complex.h(75) : error C2061: syntax error : identifier 'clog' C:\cygwin\usr\include\complex.h(75) : error C2059: syntax error : ';' C:\cygwin\usr\include\complex.h(75) : error C2059: syntax error : 'type' C:\cygwin\usr\include\complex.h(76) : error C2061: syntax error : identifier 'clogf' C:\cygwin\usr\include\complex.h(76) : error C2059: syntax error : ';' C:\cygwin\usr\include\complex.h(76) : error C2059: syntax error : 'type' C:\cygwin\usr\include\complex.h(90) : error C2061: syntax error : identifier 'cpow' C:\cygwin\usr\include\complex.h(90) : error C2059: syntax error : ';' C:\cygwin\usr\include\complex.h(90) : error C2059: syntax error : 'type' C:\cygwin\usr\include\complex.h(91) : error C2061: syntax error : identifier 'cpowf' C:\cygwin\usr\include\complex.h(91) : error C2059: syntax error : ';' C:\cygwin\usr\include\complex.h(91) : error C2059: syntax error : 'type' C:\cygwin\usr\include\complex.h(94) : error C2061: syntax error : identifier 'csqrt' C:\cygwin\usr\include\complex.h(94) : error C2059: syntax error : ';' C:\cygwin\usr\include\complex.h(94) : error C2059: syntax error : 'type' C:\cygwin\usr\include\complex.h(95) : error C2061: syntax error : identifier 'csqrtf' C:\cygwin\usr\include\complex.h(95) : error C2059: syntax error : ';' C:\cygwin\usr\include\complex.h(95) : error C2059: syntax error : 'type' C:\cygwin\usr\include\complex.h(108) : error C2061: syntax error : identifier 'conj' C:\cygwin\usr\include\complex.h(108) : error C2059: syntax error : ';' C:\cygwin\usr\include\complex.h(108) : error C2059: syntax error : 'type' C:\cygwin\usr\include\complex.h(109) : error C2061: syntax error : identifier 'conjf' C:\cygwin\usr\include\complex.h(109) : error C2059: syntax error : ';' C:\cygwin\usr\include\complex.h(109) : fatal error C1003: error count exceeds 100; stopping compilation ret = 512 Source: #include "confdefs.h" #include "conffix.h" #include int main() { double complex x; x = I; ; return 0; } Compile failed inside link ================================================================================ TEST checkCxxComplex from config.types(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/types.py:115) TESTING: checkCxxComplex from config.types(config/BuildSystem/config/types.py:115) Check for complex numbers in namespace std Pushing language Cxx sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -Zm200 -TP /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.cc Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -Zm200 -TP /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.cc sh: conftest.cc C:\Program Files (x86)\Microsoft Visual Studio 9.0\VC\include\xlocale(342) : warning C4530: C++ exception handler used, but unwind semantics are not enabled. Specify /EHsc Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { std::complex x; ; return 0; } Pushing language CXX Popping language CXX sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -Zm200 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -Zm200 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: Defined "HAVE_CXX_COMPLEX" to "1" Popping language Cxx ================================================================================ TEST checkConst from config.types(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/types.py:156) TESTING: checkConst from config.types(config/BuildSystem/config/types.py:156) Checks for working const, and if not found defines it to empty string sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.c sh: conftest.c c:\users\fraphel\appdata\local\temp\petsc-fwwje2\config.types\conftest.c(25) : warning C4700: uninitialized local variable 'x' used c:\users\fraphel\appdata\local\temp\petsc-fwwje2\config.types\conftest.c(30) : warning C4700: uninitialized local variable 't' used c:\users\fraphel\appdata\local\temp\petsc-fwwje2\config.types\conftest.c(46) : warning C4700: uninitialized local variable 'b' used Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { /* Ultrix mips cc rejects this. */ typedef int charset[2]; const charset x; /* SunOS 4.1.1 cc rejects this. */ char const *const *ccp; char **p; /* NEC SVR4.0.2 mips cc rejects this. */ struct point {int x, y;}; static struct point const zero = {0,0}; /* AIX XL C 1.02.0.0 rejects this. It does not let you subtract one const X* pointer from another in an arm of an if-expression whose if-part is not a constant expression */ const char *g = "string"; ccp = &g + (g ? g-g : 0); /* HPUX 7.0 cc rejects these. */ ++ccp; p = (char**) ccp; ccp = (char const *const *) p; /* This section avoids unused variable warnings */ if (zero.x); if (x[0]); { /* SCO 3.2v4 cc rejects this. */ char *t; char const *s = 0 ? (char *) 0 : (char const *) 0; *t++ = 0; if (*s); } { /* Someone thinks the Sun supposedly-ANSI compiler will reject this. */ int x[] = {25, 17}; const int *foo = &x[0]; ++foo; } { /* Sun SC1.0 ANSI compiler rejects this -- but not the above. */ typedef const int *iptr; iptr p = 0; ++p; } { /* AIX XL C 1.02.0.0 rejects this saying "k.c", line 2.27: 1506-025 (S) Operand must be a modifiable lvalue. */ struct s { int j; const int *ap[3]; }; struct s *b; b->j = 5; } { /* ULTRIX-32 V3.1 (Rev 9) vcc rejects this */ const int foo = 10; /* Get rid of unused variable warning */ if (foo); } ; return 0; } ================================================================================ TEST checkEndian from config.types(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/types.py:212) TESTING: checkEndian from config.types(config/BuildSystem/config/types.py:212) If the machine is big endian, defines WORDS_BIGENDIAN sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.c sh: conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.types\conftest.c(11) : error C2065: 'bogus' : undeclared identifier C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.types\conftest.c(11) : error C2146: syntax error : missing ';' before identifier 'endian' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.types\conftest.c(11) : error C2065: 'endian' : undeclared identifier C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.types\conftest.c(11) : error C2146: syntax error : missing ';' before identifier 'macros' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.types\conftest.c(13) : error C2065: 'macros' : undeclared identifier Possible ERROR while running compiler: conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.types\conftest.c(11) : error C2065: 'bogus' : undeclared identifier C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.types\conftest.c(11) : error C2146: syntax error : missing ';' before identifier 'endian' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.types\conftest.c(11) : error C2065: 'endian' : undeclared identifier C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.types\conftest.c(11) : error C2146: syntax error : missing ';' before identifier 'macros' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.types\conftest.c(13) : error C2065: 'macros' : undeclared identifier ret = 512 Source: #include "confdefs.h" #include "conffix.h" #include #ifdef HAVE_SYS_PARAM_H #include #endif int main() { #if !BYTE_ORDER || !BIG_ENDIAN || !LITTLE_ENDIAN bogus endian macros #endif ; return 0; } Pushing language C sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { /* Are we little or big endian? From Harbison&Steele. */ union { long l; char c[sizeof(long)]; } u; u.l = 1; exit(u.c[sizeof(long) - 1] == 1); ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.types\conftest.exe not found or not built by the last incremental link; performing full link Executing: /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.exe sh: /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.exe Executing: /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.exe sh: Popping language C ================================================================================ TEST checkSizeof from config.types(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/types.py:265) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:265) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: char Pushing language C sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(char)); ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.types\conftest.exe not found or not built by the last incremental link; performing full link Executing: /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.exe sh: /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.exe Executing: /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.exe sh: Popping language C Defined "SIZEOF_CHAR" to "1" ================================================================================ TEST checkSizeof from config.types(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/types.py:265) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:265) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: void * Pushing language C sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(void *)); ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.types\conftest.exe not found or not built by the last incremental link; performing full link Executing: /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.exe sh: /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.exe Executing: /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.exe sh: Popping language C Defined "SIZEOF_VOID_P" to "4" ================================================================================ TEST checkSizeof from config.types(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/types.py:265) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:265) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: short Pushing language C sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(short)); ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.types\conftest.exe not found or not built by the last incremental link; performing full link Executing: /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.exe sh: /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.exe Executing: /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.exe sh: Popping language C Defined "SIZEOF_SHORT" to "2" ================================================================================ TEST checkSizeof from config.types(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/types.py:265) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:265) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: int Pushing language C sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(int)); ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.types\conftest.exe not found or not built by the last incremental link; performing full link Executing: /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.exe sh: /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.exe Executing: /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.exe sh: Popping language C Defined "SIZEOF_INT" to "4" ================================================================================ TEST checkSizeof from config.types(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/types.py:265) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:265) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: long Pushing language C sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(long)); ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.types\conftest.exe not found or not built by the last incremental link; performing full link Executing: /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.exe sh: /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.exe Executing: /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.exe sh: Popping language C Defined "SIZEOF_LONG" to "4" ================================================================================ TEST checkSizeof from config.types(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/types.py:265) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:265) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: long long Pushing language C sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(long long)); ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.types\conftest.exe not found or not built by the last incremental link; performing full link Executing: /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.exe sh: /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.exe Executing: /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.exe sh: Popping language C Defined "SIZEOF_LONG_LONG" to "8" ================================================================================ TEST checkSizeof from config.types(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/types.py:265) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:265) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: float Pushing language C sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(float)); ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.types\conftest.exe not found or not built by the last incremental link; performing full link Executing: /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.exe sh: /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.exe Executing: /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.exe sh: Popping language C Defined "SIZEOF_FLOAT" to "4" ================================================================================ TEST checkSizeof from config.types(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/types.py:265) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:265) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: double Pushing language C sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(double)); ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.types\conftest.exe not found or not built by the last incremental link; performing full link Executing: /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.exe sh: /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.exe Executing: /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.exe sh: Popping language C Defined "SIZEOF_DOUBLE" to "8" ================================================================================ TEST checkSizeof from config.types(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/types.py:265) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:265) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: size_t Pushing language C sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(size_t)); ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.types\conftest.exe not found or not built by the last incremental link; performing full link Executing: /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.exe sh: /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.exe Executing: /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.exe sh: Popping language C Defined "SIZEOF_SIZE_T" to "4" ================================================================================ TEST checkBitsPerByte from config.types(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/types.py:316) TESTING: checkBitsPerByte from config.types(config/BuildSystem/config/types.py:316) Determine the nubmer of bits per byte and define BITS_PER_BYTE sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #if STDC_HEADERS #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); char val[2]; int i = 0; if (!f) exit(1); val[0]='\1'; val[1]='\0'; while(val[0]) {val[0] <<= 1; i++;} fprintf(f, "%d\n", i); ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.types\conftest.exe not found or not built by the last incremental link; performing full link Executing: /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.exe sh: /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.exe Executing: /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.exe sh: Defined "BITS_PER_BYTE" to "8" ================================================================================ TEST checkVisibility from config.types(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/types.py:362) TESTING: checkVisibility from config.types(config/BuildSystem/config/types.py:362) ================================================================================ TEST configureMemAlign from PETSc.utilities.memAlign(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/PETSc/utilities/memAlign.py:30) TESTING: configureMemAlign from PETSc.utilities.memAlign(config/PETSc/utilities/memAlign.py:30) Choose alignment Defined "MEMALIGN" to "16" Memory alignment is 16 ================================================================================ TEST configureCHUD from PETSc.utilities.CHUD(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/PETSc/utilities/CHUD.py:25) TESTING: configureCHUD from PETSc.utilities.CHUD(config/PETSc/utilities/CHUD.py:25) Determines if the Apple CHUD hardware monitoring utilities are available sh: uname -s Executing: uname -s sh: CYGWIN_NT-6.1-WOW64 ================================================================================ TEST check from config.libraries(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/libraries.py:145) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:145) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for function socket in library ['socket', 'nsl'] [] Pushing language C All intermediate test results are stored in /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char socket(); int main() { socket() ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -lsocket -lnsl /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -lsocket -lnsl /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : fatal error LNK1104: cannot open file 'libsocket.lib' Possible ERROR while running linker: output: LINK : fatal error LNK1104: cannot open file 'libsocket.lib' ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -lsocket -lnsl /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char socket(); int main() { socket() ; return 0; } Popping language C ================================================================================ TEST check from config.libraries(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/libraries.py:145) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:145) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for function handle_sigfpes in library ['fpe'] [] Pushing language C sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char handle_sigfpes(); int main() { handle_sigfpes() ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -lfpe /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -lfpe /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : fatal error LNK1104: cannot open file 'libfpe.lib' Possible ERROR while running linker: output: LINK : fatal error LNK1104: cannot open file 'libfpe.lib' ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -lfpe /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char handle_sigfpes(); int main() { handle_sigfpes() ; return 0; } Popping language C ================================================================================ TEST check from config.libraries(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/libraries.py:145) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:145) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for function socket in library ['socket', 'nsl'] [] Pushing language C sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char socket(); int main() { socket() ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -lsocket -lnsl /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -lsocket -lnsl /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : fatal error LNK1104: cannot open file 'libsocket.lib' Possible ERROR while running linker: output: LINK : fatal error LNK1104: cannot open file 'libsocket.lib' ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -lsocket -lnsl /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char socket(); int main() { socket() ; return 0; } Popping language C ================================================================================ TEST check from config.libraries(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/libraries.py:145) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:145) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for function handle_sigfpes in library ['fpe'] [] Pushing language C sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char handle_sigfpes(); int main() { handle_sigfpes() ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -lfpe /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -lfpe /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : fatal error LNK1104: cannot open file 'libfpe.lib' Possible ERROR while running linker: output: LINK : fatal error LNK1104: cannot open file 'libfpe.lib' ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -lfpe /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char handle_sigfpes(); int main() { handle_sigfpes() ; return 0; } Popping language C ================================================================================ TEST checkMath from config.libraries(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/libraries.py:224) TESTING: checkMath from config.libraries(config/BuildSystem/config/libraries.py:224) Check for sin() in libm, the math library Checking for function sin in library [''] [] Pushing language C sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ double sin(double); int main() { double x = 0,y; y = sin(x); ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: Popping language C Checking for function floor in library [''] [] Pushing language C sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ double floor(double); int main() { double x = 0,y; y = floor(x); ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.exe not found or not built by the last incremental link; performing full link Popping language C Checking for function log10 in library [''] [] Pushing language C sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ double log10(double); int main() { double x = 0,y; y = log10(x); ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.exe not found or not built by the last incremental link; performing full link Popping language C Checking for function pow in library [''] [] Pushing language C sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ double pow(double, double); int main() { double x = 0,y ; y = pow(x, x); ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.exe not found or not built by the last incremental link; performing full link Popping language C Math functions are linked in by default ================================================================================ TEST checkMathErf from config.libraries(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/libraries.py:240) TESTING: checkMathErf from config.libraries(config/BuildSystem/config/libraries.py:240) Check for erf() in libm, the math library Checking for function erf in library [] [] Pushing language C sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ double erf(double); int main() { double x = 0,y; y = erf(x); ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.exe not found or not built by the last incremental link; performing full link conftest.obj : error LNK2019: unresolved external symbol _erf referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: output: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.exe not found or not built by the last incremental link; performing full link conftest.obj : error LNK2019: unresolved external symbol _erf referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.exe : fatal error LNK1120: 1 unresolved externals ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ double erf(double); int main() { double x = 0,y; y = erf(x); ; return 0; } Popping language C Warning: erf() not found ================================================================================ TEST checkMathTgamma from config.libraries(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/libraries.py:249) TESTING: checkMathTgamma from config.libraries(config/BuildSystem/config/libraries.py:249) Check for tgama() in libm, the math library Checking for function tgamma in library [] [] Pushing language C sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ double tgamma(double); int main() { double x = 0,y; y = tgamma(x); ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: conftest.obj : error LNK2019: unresolved external symbol _tgamma referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: output: conftest.obj : error LNK2019: unresolved external symbol _tgamma referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.exe : fatal error LNK1120: 1 unresolved externals ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ double tgamma(double); int main() { double x = 0,y; y = tgamma(x); ; return 0; } Popping language C Warning: tgamma() not found ================================================================================ TEST checkMathFenv from config.libraries(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/libraries.py:258) TESTING: checkMathFenv from config.libraries(config/BuildSystem/config/libraries.py:258) Checks if can be used with FE_DFL_ENV Checking for function fesetenv in library [] [] Pushing language C sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include int main() { fesetenv(FE_DFL_ENV);; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: conftest.obj : error LNK2019: unresolved external symbol _fesetenv referenced in function _main conftest.obj : error LNK2001: unresolved external symbol __fe_dfl_env C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.exe : fatal error LNK1120: 2 unresolved externals Possible ERROR while running linker: output: conftest.obj : error LNK2019: unresolved external symbol _fesetenv referenced in function _main conftest.obj : error LNK2001: unresolved external symbol __fe_dfl_env C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.exe : fatal error LNK1120: 2 unresolved externals ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include int main() { fesetenv(FE_DFL_ENV);; return 0; } Popping language C Warning: with FE_DFL_ENV not found ================================================================================ TEST checkCompression from config.libraries(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/libraries.py:266) TESTING: checkCompression from config.libraries(config/BuildSystem/config/libraries.py:266) Check for libz, the compression library Checking for function compress in library [''] [] Pushing language C sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ int compress(char *dest, unsigned long *destLen, const char *source, unsigned long sourceLen); int main() { char *dest = 0; const char *source = 0; unsigned long destLen = 0, sourceLen = 0; int ret = 0; ret = compress(dest, &destLen, source, sourceLen); ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: conftest.obj : error LNK2019: unresolved external symbol _compress referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: output: conftest.obj : error LNK2019: unresolved external symbol _compress referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.exe : fatal error LNK1120: 1 unresolved externals ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ int compress(char *dest, unsigned long *destLen, const char *source, unsigned long sourceLen); int main() { char *dest = 0; const char *source = 0; unsigned long destLen = 0, sourceLen = 0; int ret = 0; ret = compress(dest, &destLen, source, sourceLen); ; return 0; } Popping language C Checking for function compress in library ['z'] [] Pushing language C sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ int compress(char *dest, unsigned long *destLen, const char *source, unsigned long sourceLen); int main() { char *dest = 0; const char *source = 0; unsigned long destLen = 0, sourceLen = 0; int ret = 0; ret = compress(dest, &destLen, source, sourceLen); ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -lz /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -lz /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : fatal error LNK1104: cannot open file 'libz.lib' Possible ERROR while running linker: output: LINK : fatal error LNK1104: cannot open file 'libz.lib' ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -lz /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ int compress(char *dest, unsigned long *destLen, const char *source, unsigned long sourceLen); int main() { char *dest = 0; const char *source = 0; unsigned long destLen = 0, sourceLen = 0; int ret = 0; ret = compress(dest, &destLen, source, sourceLen); ; return 0; } Popping language C Checking for function compress in library ['zlib.lib'] [] Pushing language C sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ int compress(char *dest, unsigned long *destLen, const char *source, unsigned long sourceLen); int main() { char *dest = 0; const char *source = 0; unsigned long destLen = 0, sourceLen = 0; int ret = 0; ret = compress(dest, &destLen, source, sourceLen); ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o zlib.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o zlib.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : fatal error LNK1104: cannot open file 'zlib.lib' Possible ERROR while running linker: output: LINK : fatal error LNK1104: cannot open file 'zlib.lib' ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o zlib.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ int compress(char *dest, unsigned long *destLen, const char *source, unsigned long sourceLen); int main() { char *dest = 0; const char *source = 0; unsigned long destLen = 0, sourceLen = 0; int ret = 0; ret = compress(dest, &destLen, source, sourceLen); ; return 0; } Popping language C Warning: No compression library found ================================================================================ TEST checkRealtime from config.libraries(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/libraries.py:287) TESTING: checkRealtime from config.libraries(config/BuildSystem/config/libraries.py:287) Check for presence of clock_gettime() in realtime library (POSIX Realtime extensions) Checking for function clock_gettime in library [''] [] Pushing language C sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c sh: conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.c(7) : error C2079: 'tp' uses undefined struct 'timespec' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.c(7) : error C2065: 'CLOCK_REALTIME' : undeclared identifier Possible ERROR while running compiler: conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.c(7) : error C2079: 'tp' uses undefined struct 'timespec' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.c(7) : error C2065: 'CLOCK_REALTIME' : undeclared identifier ret = 512 Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include int main() { struct timespec tp; clock_gettime(CLOCK_REALTIME,&tp);; return 0; } Compile failed inside link Popping language C Checking for function clock_gettime in library ['rt'] [] Pushing language C sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c sh: conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.c(7) : error C2079: 'tp' uses undefined struct 'timespec' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.c(7) : error C2065: 'CLOCK_REALTIME' : undeclared identifier Possible ERROR while running compiler: conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.c(7) : error C2079: 'tp' uses undefined struct 'timespec' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.c(7) : error C2065: 'CLOCK_REALTIME' : undeclared identifier ret = 512 Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include int main() { struct timespec tp; clock_gettime(CLOCK_REALTIME,&tp);; return 0; } Compile failed inside link Popping language C Warning: No realtime library found ================================================================================ TEST checkDynamic from config.libraries(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/libraries.py:303) TESTING: checkDynamic from config.libraries(config/BuildSystem/config/libraries.py:303) Check for the header and libraries necessary for dynamic library manipulation ================================================================================ TEST configureTimers from PETSc.utilities.timer(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/PETSc/utilities/timer.py:35) TESTING: configureTimers from PETSc.utilities.timer(config/PETSc/utilities/timer.py:35) Sets PETSC_HAVE_FAST_MPI_WTIME PETSC_USE_READ_REAL_TIME PETSC_USE_MICROSOFT_TIME. Checking for function MPI_CRAY_barrier in library [''] [] Pushing language C sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_CRAY_barrier(); int main() { MPI_CRAY_barrier() ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: conftest.obj : error LNK2019: unresolved external symbol _MPI_CRAY_barrier referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: output: conftest.obj : error LNK2019: unresolved external symbol _MPI_CRAY_barrier referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.exe : fatal error LNK1120: 1 unresolved externals ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_CRAY_barrier(); int main() { MPI_CRAY_barrier() ; return 0; } Popping language C Cray-MPI test failure ================================================================================ TEST configureMissingDefines from PETSc.utilities.missing(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/PETSc/utilities/missing.py:35) TESTING: configureMissingDefines from PETSc.utilities.missing(config/PETSc/utilities/missing.py:35) Checks for limits All intermediate test results are stored in /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #ifdef PETSC_HAVE_LIMITS_H #include #endif int main() { int i=INT_MAX; if (i); ; return 0; } sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #ifdef PETSC_HAVE_FLOAT_H #include #endif int main() { double d=DBL_MAX; if (d); ; return 0; } ================================================================================ TEST configureMissingUtypeTypedefs from PETSc.utilities.missing(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/PETSc/utilities/missing.py:45) TESTING: configureMissingUtypeTypedefs from PETSc.utilities.missing(config/PETSc/utilities/missing.py:45) Checks if u_short is undefined sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.c sh: conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\PETSc.utilities.missing\conftest.c(6) : error C2065: 'u_short' : undeclared identifier C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\PETSc.utilities.missing\conftest.c(6) : error C2146: syntax error : missing ';' before identifier 'foo' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\PETSc.utilities.missing\conftest.c(6) : error C2065: 'foo' : undeclared identifier Possible ERROR while running compiler: conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\PETSc.utilities.missing\conftest.c(6) : error C2065: 'u_short' : undeclared identifier C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\PETSc.utilities.missing\conftest.c(6) : error C2146: syntax error : missing ';' before identifier 'foo' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\PETSc.utilities.missing\conftest.c(6) : error C2065: 'foo' : undeclared identifier ret = 512 Source: #include "confdefs.h" #include "conffix.h" #include int main() { u_short foo; ; return 0; } Defined "NEEDS_UTYPE_TYPEDEFS" to "1" ================================================================================ TEST configureMissingFunctions from PETSc.utilities.missing(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/PETSc/utilities/missing.py:51) TESTING: configureMissingFunctions from PETSc.utilities.missing(config/PETSc/utilities/missing.py:51) Checks for SOCKETS Checking for function socket in library ['Ws2_32.lib'] [] Pushing language C sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include int main() { socket(0,0,0);; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: Defined "HAVE_LIBWS2_32" to "1" Popping language C Adding ['Ws2_32.lib'] to LIBS Defined "HAVE_WINSOCK2_H" to "1" Defined "HAVE_SOCKET" to "1" sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { closesocket(0); return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.o Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.o Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: Defined "HAVE_CLOSESOCKET" to "1" sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { WSAGetLastError(); return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.o Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.o Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\PETSc.utilities.missing\conftest.exe not found or not built by the last incremental link; performing full link Defined "HAVE_WSAGETLASTERROR" to "1" ================================================================================ TEST configureMissingSignals from PETSc.utilities.missing(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/PETSc/utilities/missing.py:71) TESTING: configureMissingSignals from PETSc.utilities.missing(config/PETSc/utilities/missing.py:71) Check for missing signals, and define MISSING_ if necessary sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGABRT; if (i); ; return 0; } sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.c sh: conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\PETSc.utilities.missing\conftest.c(6) : error C2065: 'SIGALRM' : undeclared identifier Possible ERROR while running compiler: conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\PETSc.utilities.missing\conftest.c(6) : error C2065: 'SIGALRM' : undeclared identifier ret = 512 Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGALRM; if (i); ; return 0; } Defined "MISSING_SIGALRM" to "1" sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.c sh: conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\PETSc.utilities.missing\conftest.c(6) : error C2065: 'SIGBUS' : undeclared identifier Possible ERROR while running compiler: conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\PETSc.utilities.missing\conftest.c(6) : error C2065: 'SIGBUS' : undeclared identifier ret = 512 Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGBUS; if (i); ; return 0; } Defined "MISSING_SIGBUS" to "1" sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.c sh: conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\PETSc.utilities.missing\conftest.c(6) : error C2065: 'SIGCHLD' : undeclared identifier Possible ERROR while running compiler: conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\PETSc.utilities.missing\conftest.c(6) : error C2065: 'SIGCHLD' : undeclared identifier ret = 512 Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGCHLD; if (i); ; return 0; } Defined "MISSING_SIGCHLD" to "1" sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.c sh: conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\PETSc.utilities.missing\conftest.c(6) : error C2065: 'SIGCONT' : undeclared identifier Possible ERROR while running compiler: conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\PETSc.utilities.missing\conftest.c(6) : error C2065: 'SIGCONT' : undeclared identifier ret = 512 Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGCONT; if (i); ; return 0; } Defined "MISSING_SIGCONT" to "1" sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGFPE; if (i); ; return 0; } sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.c sh: conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\PETSc.utilities.missing\conftest.c(6) : error C2065: 'SIGHUP' : undeclared identifier Possible ERROR while running compiler: conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\PETSc.utilities.missing\conftest.c(6) : error C2065: 'SIGHUP' : undeclared identifier ret = 512 Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGHUP; if (i); ; return 0; } Defined "MISSING_SIGHUP" to "1" sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGILL; if (i); ; return 0; } sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGINT; if (i); ; return 0; } sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.c sh: conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\PETSc.utilities.missing\conftest.c(6) : error C2065: 'SIGKILL' : undeclared identifier Possible ERROR while running compiler: conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\PETSc.utilities.missing\conftest.c(6) : error C2065: 'SIGKILL' : undeclared identifier ret = 512 Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGKILL; if (i); ; return 0; } Defined "MISSING_SIGKILL" to "1" sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.c sh: conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\PETSc.utilities.missing\conftest.c(6) : error C2065: 'SIGPIPE' : undeclared identifier Possible ERROR while running compiler: conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\PETSc.utilities.missing\conftest.c(6) : error C2065: 'SIGPIPE' : undeclared identifier ret = 512 Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGPIPE; if (i); ; return 0; } Defined "MISSING_SIGPIPE" to "1" sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.c sh: conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\PETSc.utilities.missing\conftest.c(6) : error C2065: 'SIGQUIT' : undeclared identifier Possible ERROR while running compiler: conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\PETSc.utilities.missing\conftest.c(6) : error C2065: 'SIGQUIT' : undeclared identifier ret = 512 Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGQUIT; if (i); ; return 0; } Defined "MISSING_SIGQUIT" to "1" sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGSEGV; if (i); ; return 0; } sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.c sh: conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\PETSc.utilities.missing\conftest.c(6) : error C2065: 'SIGSTOP' : undeclared identifier Possible ERROR while running compiler: conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\PETSc.utilities.missing\conftest.c(6) : error C2065: 'SIGSTOP' : undeclared identifier ret = 512 Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGSTOP; if (i); ; return 0; } Defined "MISSING_SIGSTOP" to "1" sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.c sh: conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\PETSc.utilities.missing\conftest.c(6) : error C2065: 'SIGSYS' : undeclared identifier Possible ERROR while running compiler: conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\PETSc.utilities.missing\conftest.c(6) : error C2065: 'SIGSYS' : undeclared identifier ret = 512 Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGSYS; if (i); ; return 0; } Defined "MISSING_SIGSYS" to "1" sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGTERM; if (i); ; return 0; } sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.c sh: conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\PETSc.utilities.missing\conftest.c(6) : error C2065: 'SIGTRAP' : undeclared identifier Possible ERROR while running compiler: conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\PETSc.utilities.missing\conftest.c(6) : error C2065: 'SIGTRAP' : undeclared identifier ret = 512 Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGTRAP; if (i); ; return 0; } Defined "MISSING_SIGTRAP" to "1" sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.c sh: conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\PETSc.utilities.missing\conftest.c(6) : error C2065: 'SIGTSTP' : undeclared identifier Possible ERROR while running compiler: conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\PETSc.utilities.missing\conftest.c(6) : error C2065: 'SIGTSTP' : undeclared identifier ret = 512 Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGTSTP; if (i); ; return 0; } Defined "MISSING_SIGTSTP" to "1" sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.c sh: conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\PETSc.utilities.missing\conftest.c(6) : error C2065: 'SIGURG' : undeclared identifier Possible ERROR while running compiler: conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\PETSc.utilities.missing\conftest.c(6) : error C2065: 'SIGURG' : undeclared identifier ret = 512 Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGURG; if (i); ; return 0; } Defined "MISSING_SIGURG" to "1" sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.c sh: conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\PETSc.utilities.missing\conftest.c(6) : error C2065: 'SIGUSR1' : undeclared identifier Possible ERROR while running compiler: conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\PETSc.utilities.missing\conftest.c(6) : error C2065: 'SIGUSR1' : undeclared identifier ret = 512 Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGUSR1; if (i); ; return 0; } Defined "MISSING_SIGUSR1" to "1" sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.c sh: conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\PETSc.utilities.missing\conftest.c(6) : error C2065: 'SIGUSR2' : undeclared identifier Possible ERROR while running compiler: conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\PETSc.utilities.missing\conftest.c(6) : error C2065: 'SIGUSR2' : undeclared identifier ret = 512 Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGUSR2; if (i); ; return 0; } Defined "MISSING_SIGUSR2" to "1" ================================================================================ TEST configureMissingGetdomainnamePrototype from PETSc.utilities.missing(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/PETSc/utilities/missing.py:88) TESTING: configureMissingGetdomainnamePrototype from PETSc.utilities.missing(config/PETSc/utilities/missing.py:88) sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #ifdef PETSC_HAVE_UNISTD_H #include #endif #ifdef PETSC_HAVE_NETDB_H #include #endif int main() { char test[10]; int err = getdomainname(test,10); ; return 0; } Pushing language Cxx sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -Zm200 -TP /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.cc Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -Zm200 -TP /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.cc sh: conftest.cc C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\PETSc.utilities.missing\conftest.cc(14) : error C3861: 'getdomainname': identifier not found Possible ERROR while running compiler: conftest.cc C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\PETSc.utilities.missing\conftest.cc(14) : error C3861: 'getdomainname': identifier not found ret = 512 Source: #include "confdefs.h" #include "conffix.h" #ifdef PETSC_HAVE_UNISTD_H #include #endif #ifdef PETSC_HAVE_NETDB_H #include #endif int main() { char test[10]; int err = getdomainname(test,10); ; return 0; } Compile failed inside link Added prototype int getdomainname(char *, int); to language extern C Popping language Cxx ================================================================================ TEST configureMissingSrandPrototype from PETSc.utilities.missing(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/PETSc/utilities/missing.py:110) TESTING: configureMissingSrandPrototype from PETSc.utilities.missing(config/PETSc/utilities/missing.py:110) sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #ifdef PETSC_HAVE_STDLIB_H #include #endif int main() { double a; long b=10; srand(b); a=drand48(); ; return 0; } Pushing language Cxx sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -Zm200 -TP /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.cc Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -Zm200 -TP /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing/conftest.cc sh: conftest.cc C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\PETSc.utilities.missing\conftest.cc(13) : error C3861: 'drand48': identifier not found Possible ERROR while running compiler: conftest.cc C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\PETSc.utilities.missing\conftest.cc(13) : error C3861: 'drand48': identifier not found ret = 512 Source: #include "confdefs.h" #include "conffix.h" #ifdef PETSC_HAVE_STDLIB_H #include #endif int main() { double a; long b=10; srand(b); a=drand48(); ; return 0; } Compile failed inside link Added prototype double drand48(); to language extern C Added prototype void srand48(long); to language extern C Popping language Cxx ================================================================================ TEST configureMissingIntelFastPrototypes from PETSc.utilities.missing(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/PETSc/utilities/missing.py:134) TESTING: configureMissingIntelFastPrototypes from PETSc.utilities.missing(config/PETSc/utilities/missing.py:134) ================================================================================ TEST configureScalarType from PETSc.utilities.scalarTypes(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/PETSc/utilities/scalarTypes.py:37) TESTING: configureScalarType from PETSc.utilities.scalarTypes(config/PETSc/utilities/scalarTypes.py:37) Choose between real and complex numbers Defined "USE_SCALAR_REAL" to "1" Scalar type is real Pushing language C All intermediate test results are stored in /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { double b = 2.0; int a = isnan(b); ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes/conftest.o Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes/conftest.o Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: conftest.obj : error LNK2019: unresolved external symbol _isnan referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\PETSc.utilities.scalarTypes\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: output: conftest.obj : error LNK2019: unresolved external symbol _isnan referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\PETSc.utilities.scalarTypes\conftest.exe : fatal error LNK1120: 1 unresolved externals ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes/conftest.o Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" #include int main() { double b = 2.0; int a = isnan(b); ; return 0; } sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { double b = 2.0; int a = isinf(b); ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes/conftest.o Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes/conftest.o Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: conftest.obj : error LNK2019: unresolved external symbol _isinf referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\PETSc.utilities.scalarTypes\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: output: conftest.obj : error LNK2019: unresolved external symbol _isinf referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\PETSc.utilities.scalarTypes\conftest.exe : fatal error LNK1120: 1 unresolved externals ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes/conftest.o Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" #include int main() { double b = 2.0; int a = isinf(b); ; return 0; } sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { double b = 2.0;int a = _isnan(b); ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes/conftest.o Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes/conftest.o Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: Defined "HAVE__ISNAN" to "1" sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { double b = 2.0;int a = _finite(b); ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes/conftest.o Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes/conftest.o Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\PETSc.utilities.scalarTypes\conftest.exe not found or not built by the last incremental link; performing full link Defined "HAVE__FINITE" to "1" Popping language C ================================================================================ TEST configurePrecision from PETSc.utilities.scalarTypes(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/PETSc/utilities/scalarTypes.py:73) TESTING: configurePrecision from PETSc.utilities.scalarTypes(config/PETSc/utilities/scalarTypes.py:73) Set the default real number precision for PETSc objects Defined "USE_REAL_DOUBLE" to "1" Precision is double ================================================================================ TEST configureLibraryOptions from PETSc.utilities.libraryOptions(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/PETSc/utilities/libraryOptions.py:48) TESTING: configureLibraryOptions from PETSc.utilities.libraryOptions(config/PETSc/utilities/libraryOptions.py:48) Sets PETSC_USE_DEBUG, PETSC_USE_INFO, PETSC_USE_LOG, PETSC_USE_CTABLE and PETSC_USE_FORTRAN_KERNELS Defined "USE_LOG" to "1" Defined "USE_DEBUG" to "1" Defined "USE_INFO" to "1" Defined "USE_CTABLE" to "1" **********Checking if running on BGL/IBM detected Checking for function bgl_perfctr_void in library [''] [] Pushing language C sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char bgl_perfctr_void(); int main() { bgl_perfctr_void() ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.exe not found or not built by the last incremental link; performing full link conftest.obj : error LNK2019: unresolved external symbol _bgl_perfctr_void referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: output: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.exe not found or not built by the last incremental link; performing full link conftest.obj : error LNK2019: unresolved external symbol _bgl_perfctr_void referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.exe : fatal error LNK1120: 1 unresolved externals ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char bgl_perfctr_void(); int main() { bgl_perfctr_void() ; return 0; } Popping language C Checking for function ADIOI_BGL_Open in library [''] [] Pushing language C sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char ADIOI_BGL_Open(); int main() { ADIOI_BGL_Open() ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: conftest.obj : error LNK2019: unresolved external symbol _ADIOI_BGL_Open referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: output: conftest.obj : error LNK2019: unresolved external symbol _ADIOI_BGL_Open referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.exe : fatal error LNK1120: 1 unresolved externals ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char ADIOI_BGL_Open(); int main() { ADIOI_BGL_Open() ; return 0; } Popping language C *********BGL/IBM test failure Defined "USE_BACKWARD_LOOP" to "1" Defined "Alignx(a,b)" to " " ================================================================================ TEST configureISColorValueType from PETSc.utilities.libraryOptions(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/PETSc/utilities/libraryOptions.py:92) TESTING: configureISColorValueType from PETSc.utilities.libraryOptions(config/PETSc/utilities/libraryOptions.py:92) Sets PETSC_IS_COLOR_VALUE_TYPE, MPIU_COLORING_VALUE, IS_COLORING_MAX required by ISColor Defined "MPIU_COLORING_VALUE" to "MPI_UNSIGNED_SHORT" Defined "IS_COLORING_MAX" to "65535" Defined "IS_COLOR_VALUE_TYPE" to "short" ================================================================================ TEST configureFortranCommandLine from PETSc.utilities.fortranCommandLine(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/PETSc/utilities/fortranCommandLine.py:27) TESTING: configureFortranCommandLine from PETSc.utilities.fortranCommandLine(config/PETSc/utilities/fortranCommandLine.py:27) Check for the mechanism to retrieve command line arguments in Fortran Pushing language C Checking for function get_command_argument in library [''] [] Pushing language C sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char get_command_argument(); int main() { get_command_argument() ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: conftest.obj : error LNK2019: unresolved external symbol _get_command_argument referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: output: conftest.obj : error LNK2019: unresolved external symbol _get_command_argument referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.exe : fatal error LNK1120: 1 unresolved externals ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char get_command_argument(); int main() { get_command_argument() ; return 0; } Popping language C Checking for function getarg in library [''] [] Pushing language C sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char getarg(); int main() { getarg() ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: conftest.obj : error LNK2019: unresolved external symbol _getarg referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: output: conftest.obj : error LNK2019: unresolved external symbol _getarg referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.exe : fatal error LNK1120: 1 unresolved externals ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char getarg(); int main() { getarg() ; return 0; } Popping language C Checking for function ipxfargc_ sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char ipxfargc_(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char ipxfargc_(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_ipxfargc_) || defined (__stub___ipxfargc_) choke me #else ipxfargc_(); #endif ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe not found or not built by the last incremental link; performing full link conftest.obj : error LNK2019: unresolved external symbol _ipxfargc_ referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: output: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe not found or not built by the last incremental link; performing full link conftest.obj : error LNK2019: unresolved external symbol _ipxfargc_ referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char ipxfargc_(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char ipxfargc_(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_ipxfargc_) || defined (__stub___ipxfargc_) choke me #else ipxfargc_(); #endif ; return 0; } Checking for function f90_unix_MP_iargc sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char f90_unix_MP_iargc(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char f90_unix_MP_iargc(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_f90_unix_MP_iargc) || defined (__stub___f90_unix_MP_iargc) choke me #else f90_unix_MP_iargc(); #endif ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: conftest.obj : error LNK2019: unresolved external symbol _f90_unix_MP_iargc referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: output: conftest.obj : error LNK2019: unresolved external symbol _f90_unix_MP_iargc referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char f90_unix_MP_iargc(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char f90_unix_MP_iargc(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_f90_unix_MP_iargc) || defined (__stub___f90_unix_MP_iargc) choke me #else f90_unix_MP_iargc(); #endif ; return 0; } Checking for function PXFGETARG sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char PXFGETARG(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char PXFGETARG(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_PXFGETARG) || defined (__stub___PXFGETARG) choke me #else PXFGETARG(); #endif ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: conftest.obj : error LNK2019: unresolved external symbol _PXFGETARG referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: output: conftest.obj : error LNK2019: unresolved external symbol _PXFGETARG referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char PXFGETARG(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char PXFGETARG(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_PXFGETARG) || defined (__stub___PXFGETARG) choke me #else PXFGETARG(); #endif ; return 0; } Checking for function iargc_ sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char iargc_(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char iargc_(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_iargc_) || defined (__stub___iargc_) choke me #else iargc_(); #endif ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: libf2c.lib(main1.obj) : error LNK2005: _main already defined in conftest.obj libf2c.lib(main1.obj) : error LNK2019: unresolved external symbol _MAIN__ referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: output: libf2c.lib(main1.obj) : error LNK2005: _main already defined in conftest.obj libf2c.lib(main1.obj) : error LNK2019: unresolved external symbol _MAIN__ referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char iargc_(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char iargc_(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_iargc_) || defined (__stub___iargc_) choke me #else iargc_(); #endif ; return 0; } Checking for function GETARG@16 sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c sh: conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.c(10) : error C2018: unknown character '0x40' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.c(10) : error C2143: syntax error : missing '{' before 'constant' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.c(10) : error C2059: syntax error : '' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.c(17) : error C2004: expected 'defined(id)' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.c(17) : fatal error C1012: unmatched parenthesis : missing ')' Possible ERROR while running compiler: conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.c(10) : error C2018: unknown character '0x40' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.c(10) : error C2143: syntax error : missing '{' before 'constant' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.c(10) : error C2059: syntax error : '' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.c(17) : error C2004: expected 'defined(id)' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.c(17) : fatal error C1012: unmatched parenthesis : missing ')' ret = 512 Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char GETARG@16(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char GETARG@16(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_GETARG@16) || defined (__stub___GETARG@16) choke me #else GETARG@16(); #endif ; return 0; } Compile failed inside link Checking for function _gfortran_iargc sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _gfortran_iargc(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _gfortran_iargc(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__gfortran_iargc) || defined (__stub____gfortran_iargc) choke me #else _gfortran_iargc(); #endif ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: conftest.obj : error LNK2019: unresolved external symbol __gfortran_iargc referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: output: conftest.obj : error LNK2019: unresolved external symbol __gfortran_iargc referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.functions\conftest.exe : fatal error LNK1120: 1 unresolved externals ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions/conftest.o Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _gfortran_iargc(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _gfortran_iargc(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__gfortran_iargc) || defined (__stub____gfortran_iargc) choke me #else _gfortran_iargc(); #endif ; return 0; } Popping language C Pushing language C ================================================================================ TEST configureLibrary from config.packages.MPI(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/packages/MPI.py:744) TESTING: configureLibrary from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:744) Calls the regular package configureLibrary and then does an additional test needed by MPI ================================================================================== Checking for a functional MPI Checking for library in User specified MPI libraries: ['/cygdrive/c/Program Files (x86)/MPICH2/lib/mpi.lib'] Contents: ['bin', 'COPYRIGHT.rtf', 'examples', 'include', 'jumpshot', 'lib', 'README.winbin.rtf', 'setup.jpg'] ================================================================================ TEST check from config.libraries(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/libraries.py:145) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:145) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for function MPI_Init in library ['/cygdrive/c/Program Files (x86)/MPICH2/lib/mpi.lib'] [] Pushing language C sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Init(); int main() { MPI_Init() ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: Defined "HAVE_LIBMPI" to "1" Popping language C Checking for function MPI_Comm_create in library ['/cygdrive/c/Program Files (x86)/MPICH2/lib/mpi.lib'] [] Pushing language C sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Comm_create(); int main() { MPI_Comm_create() ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.exe not found or not built by the last incremental link; performing full link Defined "HAVE_LIBMPI" to "1" Popping language C Checking for headers User specified MPI libraries: ['/cygdrive/c/Program Files (x86)/MPICH2/include'] Pushing language C ================================================================================ TEST checkInclude from config.headers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['mpi.h'] in ['/cygdrive/c/Program Files (x86)/MPICH2/include'] Checking include with compiler flags var CPPFLAGS ['/cygdrive/c/Program Files (x86)/MPICH2/include'] sh: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c Executing: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c sh: conftest.c #line 1 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 7 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 11 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 15 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 19 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 23 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 27 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 31 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 35 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 39 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 43 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 47 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 51 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 55 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 59 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 63 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 67 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 71 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 75 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 79 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 83 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 87 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 91 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 95 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 99 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 103 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"c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 147 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 151 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 155 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 159 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 163 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 167 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 171 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 175 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 179 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 183 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 187 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 191 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 195 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 199 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 203 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 207 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 211 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 215 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 219 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 223 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"c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 307 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 311 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 315 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 319 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 323 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 327 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 331 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 335 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 339 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 343 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 347 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 351 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 355 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 359 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 363 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 367 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 371 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 375 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 379 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 383 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 387 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 391 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 395 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 399 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 403 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 407 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 411 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 413 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 2 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" typedef int int32_t; typedef int mode_t; typedef int pid_t; #line 14 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 15 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 16 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 3 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "C:\\Program Files (x86)\\MPICH2\\include\\mpi.h" #line 16 "C:\\Program Files (x86)\\MPICH2\\include\\mpi.h" typedef int MPI_Datatype; typedef int MPI_Comm; typedef int MPI_Group; typedef int MPI_Win; typedef struct ADIOI_FileD *MPI_File; typedef int MPI_Op; extern int MPICH_ATTR_FAILED_PROCESSES; typedef enum MPIR_Topo_type { MPI_GRAPH=1, MPI_CART=2, MPI_DIST_GRAPH=3 } MPIR_Topo_type; typedef void (MPI_Handler_function) ( MPI_Comm *, int *, ... ); typedef int (MPI_Comm_copy_attr_function)(MPI_Comm, int, void *, void *, void *, int *); typedef int (MPI_Comm_delete_attr_function)(MPI_Comm, int, void *, void *); typedef int (MPI_Type_copy_attr_function)(MPI_Datatype, int, void *, void *, void *, int *); typedef int (MPI_Type_delete_attr_function)(MPI_Datatype, int, void *, void *); typedef int (MPI_Win_copy_attr_function)(MPI_Win, int, void *, void *, void *, int *); typedef int (MPI_Win_delete_attr_function)(MPI_Win, int, void *, void *); typedef void (MPI_Comm_errhandler_function)(MPI_Comm *, int *, ...); typedef void (MPI_File_errhandler_function)(MPI_File *, int *, ...); typedef void (MPI_Win_errhandler_function)(MPI_Win *, int *, ...); typedef MPI_Comm_errhandler_function MPI_Comm_errhandler_fn; typedef MPI_File_errhandler_function MPI_File_errhandler_fn; typedef MPI_Win_errhandler_function MPI_Win_errhandler_fn; typedef int MPI_Errhandler; typedef int MPI_Request; typedef void (MPI_User_function) ( void *, void *, int *, MPI_Datatype * ); typedef int (MPI_Copy_function) ( MPI_Comm, int, void *, void *, void *, int * ); typedef int (MPI_Delete_function) ( MPI_Comm, int, void *, void * ); enum MPIR_Combiner_enum { MPI_COMBINER_NAMED = 1, MPI_COMBINER_DUP = 2, MPI_COMBINER_CONTIGUOUS = 3, MPI_COMBINER_VECTOR = 4, MPI_COMBINER_HVECTOR_INTEGER = 5, MPI_COMBINER_HVECTOR = 6, MPI_COMBINER_INDEXED = 7, MPI_COMBINER_HINDEXED_INTEGER = 8, MPI_COMBINER_HINDEXED = 9, MPI_COMBINER_INDEXED_BLOCK = 10, MPI_COMBINER_STRUCT_INTEGER = 11, MPI_COMBINER_STRUCT = 12, MPI_COMBINER_SUBARRAY = 13, MPI_COMBINER_DARRAY = 14, MPI_COMBINER_F90_REAL = 15, MPI_COMBINER_F90_COMPLEX = 16, MPI_COMBINER_F90_INTEGER = 17, MPI_COMBINER_RESIZED = 18 }; typedef int MPI_Info; typedef int MPI_Aint; typedef int MPI_Fint; #line 388 "C:\\Program Files (x86)\\MPICH2\\include\\mpi.h" typedef __int64 MPI_Offset; #line 390 "C:\\Program Files (x86)\\MPICH2\\include\\mpi.h" typedef struct MPI_Status { int count; int cancelled; int MPI_SOURCE; int MPI_TAG; int MPI_ERROR; } MPI_Status; #line 452 "C:\\Program Files (x86)\\MPICH2\\include\\mpi.h" #line 453 "C:\\Program Files (x86)\\MPICH2\\include\\mpi.h" extern __declspec(dllimport) MPI_Fint * MPI_F_STATUS_IGNORE; extern __declspec(dllimport) MPI_Fint * MPI_F_STATUSES_IGNORE; typedef int (MPI_Grequest_cancel_function)(void *, int); typedef int (MPI_Grequest_free_function)(void *); typedef int (MPI_Grequest_query_function)(void *, MPI_Status *); typedef int (MPI_Datarep_conversion_function)(void *, MPI_Datatype, int, void *, MPI_Offset, void *); typedef int (MPI_Datarep_extent_function)(MPI_Datatype datatype, MPI_Aint *, void *); Found header files ['mpi.h'] in ['/cygdrive/c/Program Files (x86)/MPICH2/include'] Popping language C ================================================================================ TEST configureConversion from config.packages.MPI(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/packages/MPI.py:214) TESTING: configureConversion from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:214) Check for the functions which convert communicators between C and Fortran - Define HAVE_MPI_COMM_F2C and HAVE_MPI_COMM_C2F if they are present - Some older MPI 1 implementations are missing these All intermediate test results are stored in /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { if (MPI_Comm_f2c((MPI_Fint)0)); ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: Defined "HAVE_MPI_COMM_F2C" to "1" sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { if (MPI_Comm_c2f(MPI_COMM_WORLD)); ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.packages.MPI\conftest.exe not found or not built by the last incremental link; performing full link Defined "HAVE_MPI_COMM_C2F" to "1" sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_Fint a; ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.packages.MPI\conftest.exe not found or not built by the last incremental link; performing full link Defined "HAVE_MPI_FINT" to "1" ================================================================================ TEST configureMPI2 from config.packages.MPI(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/packages/MPI.py:182) TESTING: configureMPI2 from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:182) Check for functions added to the interface in MPI-2 sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int flag;if (MPI_Finalized(&flag)); ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.packages.MPI\conftest.exe not found or not built by the last incremental link; performing full link Defined "HAVE_MPI_FINALIZED" to "1" sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { if (MPI_Allreduce(MPI_IN_PLACE,0, 1, MPI_INT, MPI_SUM, MPI_COMM_SELF)); ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.packages.MPI\conftest.exe not found or not built by the last incremental link; performing full link Defined "HAVE_MPI_IN_PLACE" to "1" sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int count=2; int blocklens[2]={0,1}; MPI_Aint indices[2]={0,1}; MPI_Datatype old_types[2]={0,1}; MPI_Datatype *newtype = 0; if (MPI_Type_create_struct(count, blocklens, indices, old_types, newtype)); ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.packages.MPI\conftest.exe not found or not built by the last incremental link; performing full link sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_Comm_errhandler_fn * p_err_fun = 0; MPI_Errhandler * p_errhandler = 0; if (MPI_Comm_create_errhandler(p_err_fun,p_errhandler)); ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.packages.MPI\conftest.exe not found or not built by the last incremental link; performing full link sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { if (MPI_Comm_set_errhandler(MPI_COMM_WORLD,MPI_ERRORS_RETURN)); ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.packages.MPI\conftest.exe not found or not built by the last incremental link; performing full link ================================================================================ TEST configureTypes from config.packages.MPI(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/packages/MPI.py:234) TESTING: configureTypes from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:234) Checking for MPI types Checking for size of type: MPI_Comm Pushing language C sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif #define MPICH_IGNORE_CXX_SEEK #define MPICH_SKIP_MPICXX 1 #define OMPI_SKIP_MPICXX 1 #include int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(MPI_Comm)); ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.types\conftest.exe not found or not built by the last incremental link; performing full link Executing: /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.exe sh: /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.exe Executing: /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.exe sh: Popping language C Defined "SIZEOF_MPI_COMM" to "4" Checking for size of type: MPI_Fint Pushing language C sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif #define MPICH_IGNORE_CXX_SEEK #define MPICH_SKIP_MPICXX 1 #define OMPI_SKIP_MPICXX 1 #include int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(MPI_Fint)); ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.o Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.types\conftest.exe not found or not built by the last incremental link; performing full link Executing: /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.exe sh: /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.exe Executing: /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types/conftest.exe sh: Popping language C Defined "SIZEOF_MPI_FINT" to "4" ================================================================================ TEST configureMPITypes from config.packages.MPI(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/packages/MPI.py:246) TESTING: configureMPITypes from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:246) Checking for MPI Datatype handles sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #ifdef PETSC_HAVE_STDLIB_H #include #endif #include int main() { MPI_Aint size; int ierr; MPI_Init(0,0); ierr = MPI_Type_extent(MPI_LONG_DOUBLE, &size); if(ierr || (size == 0)) exit(1); MPI_Finalize(); ; return 0; } Pushing language C sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #ifdef PETSC_HAVE_STDLIB_H #include #endif #include int main() { MPI_Aint size; int ierr; MPI_Init(0,0); ierr = MPI_Type_extent(MPI_LONG_DOUBLE, &size); if(ierr || (size == 0)) exit(1); MPI_Finalize(); ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.packages.MPI\conftest.exe not found or not built by the last incremental link; performing full link Executing: /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.exe sh: /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.exe Executing: /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.exe sh: Defined "HAVE_MPI_LONG_DOUBLE" to "1" Popping language C sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #ifdef PETSC_HAVE_STDLIB_H #include #endif #include int main() { MPI_Aint size; int ierr; MPI_Init(0,0); ierr = MPI_Type_extent(MPI_C_DOUBLE_COMPLEX, &size); if(ierr || (size == 0)) exit(1); MPI_Finalize(); ; return 0; } Pushing language C sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #ifdef PETSC_HAVE_STDLIB_H #include #endif #include int main() { MPI_Aint size; int ierr; MPI_Init(0,0); ierr = MPI_Type_extent(MPI_C_DOUBLE_COMPLEX, &size); if(ierr || (size == 0)) exit(1); MPI_Finalize(); ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.packages.MPI\conftest.exe not found or not built by the last incremental link; performing full link Executing: /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.exe sh: /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.exe Executing: /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.exe sh: Defined "HAVE_MPI_C_DOUBLE_COMPLEX" to "1" Popping language C ================================================================================ TEST configureMissingPrototypes from config.packages.MPI(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/packages/MPI.py:319) TESTING: configureMissingPrototypes from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:319) Checks for missing prototypes, which it adds to petscfix.h ================================================================================ TEST SGIMPICheck from config.packages.MPI(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/packages/MPI.py:630) TESTING: SGIMPICheck from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:630) Returns true if SGI MPI is used Checking for function MPI_SGI_barrier in library ['/cygdrive/c/Program Files (x86)/MPICH2/lib/mpi.lib'] [] Pushing language C sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_SGI_barrier(); int main() { MPI_SGI_barrier() ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.exe not found or not built by the last incremental link; performing full link conftest.obj : error LNK2019: unresolved external symbol _MPI_SGI_barrier referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: output: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.exe not found or not built by the last incremental link; performing full link conftest.obj : error LNK2019: unresolved external symbol _MPI_SGI_barrier referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.exe : fatal error LNK1120: 1 unresolved externals ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_SGI_barrier(); int main() { MPI_SGI_barrier() ; return 0; } Popping language C SGI MPI test failure ================================================================================ TEST CxxMPICheck from config.packages.MPI(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/packages/MPI.py:640) TESTING: CxxMPICheck from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:640) Make sure C++ can compile and link Pushing language Cxx Checking for header mpi.h sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -Zm200 -TP -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.cc Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -Zm200 -TP -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.cc sh: conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { ; return 0; } Checking for C++ MPI_Finalize() Checking for function MPI_Finalize in library ['/cygdrive/c/Program Files (x86)/MPICH2/lib/mpi.lib'] [] Pushing language Cxx sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -Zm200 -TP -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.cc Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -Zm200 -TP -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.cc sh: conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include int main() { int ierr; ierr = MPI_Finalize();; return 0; } Pushing language CXX Popping language CXX sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -Zm200 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -Zm200 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: Defined "HAVE_LIBMPI" to "1" Popping language Cxx Popping language Cxx ================================================================================ TEST FortranMPICheck from config.packages.MPI(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/packages/MPI.py:658) TESTING: FortranMPICheck from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:658) Make sure fortran include [mpif.h] and library symbols are found ================================================================================ TEST configureIO from config.packages.MPI(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/packages/MPI.py:683) TESTING: configureIO from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:683) Check for the functions in MPI/IO - Define HAVE_MPIIO if they are present - Some older MPI 1 implementations are missing these sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_Aint lb, extent; if (MPI_Type_get_extent(MPI_INT, &lb, &extent)); ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.packages.MPI\conftest.exe not found or not built by the last incremental link; performing full link sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.c sh: conftest.c c:\users\fraphel\appdata\local\temp\petsc-fwwje2\config.packages.mpi\conftest.c(9) : warning C4700: uninitialized local variable 'buf' used c:\users\fraphel\appdata\local\temp\petsc-fwwje2\config.packages.mpi\conftest.c(9) : warning C4700: uninitialized local variable 'fh' used Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_File fh; void *buf; MPI_Status status; if (MPI_File_write_all(fh, buf, 1, MPI_INT, &status)); ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.packages.MPI\conftest.exe not found or not built by the last incremental link; performing full link sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.c sh: conftest.c c:\users\fraphel\appdata\local\temp\petsc-fwwje2\config.packages.mpi\conftest.c(9) : warning C4700: uninitialized local variable 'buf' used c:\users\fraphel\appdata\local\temp\petsc-fwwje2\config.packages.mpi\conftest.c(9) : warning C4700: uninitialized local variable 'fh' used Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_File fh; void *buf; MPI_Status status; if (MPI_File_read_all(fh, buf, 1, MPI_INT, &status)); ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.packages.MPI\conftest.exe not found or not built by the last incremental link; performing full link sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.c sh: conftest.c c:\users\fraphel\appdata\local\temp\petsc-fwwje2\config.packages.mpi\conftest.c(9) : warning C4700: uninitialized local variable 'info' used c:\users\fraphel\appdata\local\temp\petsc-fwwje2\config.packages.mpi\conftest.c(9) : warning C4700: uninitialized local variable 'disp' used c:\users\fraphel\appdata\local\temp\petsc-fwwje2\config.packages.mpi\conftest.c(9) : warning C4700: uninitialized local variable 'fh' used Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_File fh; MPI_Offset disp; MPI_Info info; if (MPI_File_set_view(fh, disp, MPI_INT, MPI_INT, "", info)); ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.packages.MPI\conftest.exe not found or not built by the last incremental link; performing full link sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.c sh: conftest.c c:\users\fraphel\appdata\local\temp\petsc-fwwje2\config.packages.mpi\conftest.c(8) : warning C4700: uninitialized local variable 'info' used Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_File fh; MPI_Info info; if (MPI_File_open(MPI_COMM_SELF, "", 0, info, &fh)); ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.packages.MPI\conftest.exe not found or not built by the last incremental link; performing full link sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_File fh; MPI_Info info; if (MPI_File_close(&fh)); ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.packages.MPI\conftest.exe not found or not built by the last incremental link; performing full link Defined "HAVE_MPIIO" to "1" ================================================================================ TEST findMPIInc from config.packages.MPI(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/packages/MPI.py:720) TESTING: findMPIInc from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:720) Find MPI include paths from "mpicc -show" sh: win32fe cl -show Executing: win32fe cl -show sh: cl : Command line warning D9002 : ignoring unknown option '-show' cl : Command line error D8003 : missing source filename Checking for function MPI_Alltoallw in library ['/cygdrive/c/Program Files (x86)/MPICH2/lib/mpi.lib'] [] Pushing language C sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Alltoallw(); int main() { MPI_Alltoallw() ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.exe not found or not built by the last incremental link; performing full link Defined "HAVE_LIBMPI" to "1" Popping language C Checking for function MPI_Type_create_indexed_block in library ['/cygdrive/c/Program Files (x86)/MPICH2/lib/mpi.lib'] [] Pushing language C sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Type_create_indexed_block(); int main() { MPI_Type_create_indexed_block() ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.exe not found or not built by the last incremental link; performing full link Defined "HAVE_LIBMPI" to "1" Popping language C Defined "HAVE_MPI_ALLTOALLW" to "1" Checking for function MPI_Win_create in library ['/cygdrive/c/Program Files (x86)/MPICH2/lib/mpi.lib'] [] Pushing language C sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Win_create(); int main() { MPI_Win_create() ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.exe not found or not built by the last incremental link; performing full link Defined "HAVE_LIBMPI" to "1" Popping language C Defined "HAVE_MPI_WIN_CREATE" to "1" Defined "HAVE_MPI_REPLACE" to "1" Checking for function MPI_Comm_spawn in library ['/cygdrive/c/Program Files (x86)/MPICH2/lib/mpi.lib'] [] Pushing language C sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Comm_spawn(); int main() { MPI_Comm_spawn() ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.exe not found or not built by the last incremental link; performing full link Defined "HAVE_LIBMPI" to "1" Popping language C Defined "HAVE_MPI_COMM_SPAWN" to "1" Checking for function MPI_Type_get_envelope in library ['/cygdrive/c/Program Files (x86)/MPICH2/lib/mpi.lib'] [] Pushing language C sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Type_get_envelope(); int main() { MPI_Type_get_envelope() ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.exe not found or not built by the last incremental link; performing full link Defined "HAVE_LIBMPI" to "1" Popping language C Defined "HAVE_MPI_TYPE_GET_ENVELOPE" to "1" Checking for function MPI_Type_get_extent in library ['/cygdrive/c/Program Files (x86)/MPICH2/lib/mpi.lib'] [] Pushing language C sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Type_get_extent(); int main() { MPI_Type_get_extent() ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.exe not found or not built by the last incremental link; performing full link Defined "HAVE_LIBMPI" to "1" Popping language C Defined "HAVE_MPI_TYPE_GET_EXTENT" to "1" Checking for function MPI_Type_dup in library ['/cygdrive/c/Program Files (x86)/MPICH2/lib/mpi.lib'] [] Pushing language C sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Type_dup(); int main() { MPI_Type_dup() ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.exe not found or not built by the last incremental link; performing full link Defined "HAVE_LIBMPI" to "1" Popping language C Defined "HAVE_MPI_TYPE_DUP" to "1" Checking for function MPI_Init_thread in library ['/cygdrive/c/Program Files (x86)/MPICH2/lib/mpi.lib'] [] Pushing language C sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Init_thread(); int main() { MPI_Init_thread() ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.exe not found or not built by the last incremental link; performing full link Defined "HAVE_LIBMPI" to "1" Popping language C Defined "HAVE_MPI_INIT_THREAD" to "1" Checking for function MPIX_Iallreduce in library ['/cygdrive/c/Program Files (x86)/MPICH2/lib/mpi.lib'] [] Pushing language C sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPIX_Iallreduce(); int main() { MPIX_Iallreduce() ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.exe not found or not built by the last incremental link; performing full link conftest.obj : error LNK2019: unresolved external symbol _MPIX_Iallreduce referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: output: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.exe not found or not built by the last incremental link; performing full link conftest.obj : error LNK2019: unresolved external symbol _MPIX_Iallreduce referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.exe : fatal error LNK1120: 1 unresolved externals ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPIX_Iallreduce(); int main() { MPIX_Iallreduce() ; return 0; } Popping language C Checking for function MPI_Iallreduce in library ['/cygdrive/c/Program Files (x86)/MPICH2/lib/mpi.lib'] [] Pushing language C sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Iallreduce(); int main() { MPI_Iallreduce() ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: conftest.obj : error LNK2019: unresolved external symbol _MPI_Iallreduce referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: output: conftest.obj : error LNK2019: unresolved external symbol _MPI_Iallreduce referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.exe : fatal error LNK1120: 1 unresolved externals ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Iallreduce(); int main() { MPI_Iallreduce() ; return 0; } Popping language C Checking for function MPI_Ibarrier in library ['/cygdrive/c/Program Files (x86)/MPICH2/lib/mpi.lib'] [] Pushing language C sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Ibarrier(); int main() { MPI_Ibarrier() ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: conftest.obj : error LNK2019: unresolved external symbol _MPI_Ibarrier referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: output: conftest.obj : error LNK2019: unresolved external symbol _MPI_Ibarrier referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.exe : fatal error LNK1120: 1 unresolved externals ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Ibarrier(); int main() { MPI_Ibarrier() ; return 0; } Popping language C Checking for function MPI_Finalized in library ['/cygdrive/c/Program Files (x86)/MPICH2/lib/mpi.lib'] [] Pushing language C sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Finalized(); int main() { MPI_Finalized() ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: Defined "HAVE_LIBMPI" to "1" Popping language C Defined "HAVE_MPI_FINALIZED" to "1" Checking for function MPI_Exscan in library ['/cygdrive/c/Program Files (x86)/MPICH2/lib/mpi.lib'] [] Pushing language C sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Exscan(); int main() { MPI_Exscan() ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.exe not found or not built by the last incremental link; performing full link Defined "HAVE_LIBMPI" to "1" Popping language C Defined "HAVE_MPI_EXSCAN" to "1" sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int combiner = MPI_COMBINER_DUP;; return 0; } Defined "HAVE_MPI_COMBINER_DUP" to "1" Checking for function MPIDI_CH3I_sock_set in library ['/cygdrive/c/Program Files (x86)/MPICH2/lib/mpi.lib'] [] Pushing language C sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPIDI_CH3I_sock_set(); int main() { MPIDI_CH3I_sock_set() ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.exe not found or not built by the last incremental link; performing full link conftest.obj : error LNK2019: unresolved external symbol _MPIDI_CH3I_sock_set referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: output: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.exe not found or not built by the last incremental link; performing full link conftest.obj : error LNK2019: unresolved external symbol _MPIDI_CH3I_sock_set referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.exe : fatal error LNK1120: 1 unresolved externals ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPIDI_CH3I_sock_set(); int main() { MPIDI_CH3I_sock_set() ; return 0; } Popping language C Checking for function MPIDI_CH3I_sock_fixed_nbc_progress in library ['/cygdrive/c/Program Files (x86)/MPICH2/lib/mpi.lib'] [] Pushing language C sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPIDI_CH3I_sock_fixed_nbc_progress(); int main() { MPIDI_CH3I_sock_fixed_nbc_progress() ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: conftest.obj : error LNK2019: unresolved external symbol _MPIDI_CH3I_sock_fixed_nbc_progress referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: output: conftest.obj : error LNK2019: unresolved external symbol _MPIDI_CH3I_sock_fixed_nbc_progress referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.exe : fatal error LNK1120: 1 unresolved externals ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPIDI_CH3I_sock_fixed_nbc_progress(); int main() { MPIDI_CH3I_sock_fixed_nbc_progress() ; return 0; } Popping language C ================================================================================ TEST checkSharedLibrary from config.packages.MPI(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/packages/MPI.py:132) TESTING: checkSharedLibrary from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:132) Sets flag indicating if MPI libraries are shared or not and determines if MPI libraries CANNOT be used by shared libraries ================================================================================ TEST configureMPIEXEC from config.packages.MPI(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/packages/MPI.py:145) TESTING: configureMPIEXEC from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:145) Checking for mpiexec Pushing language C Popping language C Checking for program /cygdrive/c/Program Files (x86)/MPICH2/bin/mpiexec...found Defined make macro "MPIEXEC" to "/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/bin/mpiexec" sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #ifdef __cplusplus extern "C" #endif int init(int argc, char *argv[]) { int isInitialized; MPI_Init(&argc, &argv); MPI_Initialized(&isInitialized); return (int) isInitialized; } Pushing language C Popping language C sh: /usr/bin/ar cr /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/libconftest.lib /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o ; /usr/bin/ranlib /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/libconftest.lib Executing: /usr/bin/ar cr /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/libconftest.lib /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o ; /usr/bin/ranlib /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/libconftest.lib sh: sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #ifdef __cplusplus extern "C" #endif int checkInit(void) { int isInitialized; MPI_Initialized(&isInitialized); if (isInitialized) MPI_Finalize(); return (int) isInitialized; } Pushing language C Popping language C sh: /usr/bin/ar cr /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/libconftest.lib /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o ; /usr/bin/ranlib /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/libconftest.lib Executing: /usr/bin/ar cr /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/libconftest.lib /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/conftest.o ; /usr/bin/ranlib /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI/libconftest.lib sh: sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c sh: conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.c(19) : error C2065: 'RTLD_LAZY' : undeclared identifier C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.c(19) : warning C4047: '=' : 'void *' differs in levels of indirection from 'int' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.c(33) : error C2065: 'RTLD_LAZY' : undeclared identifier C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.c(33) : warning C4047: '=' : 'void *' differs in levels of indirection from 'int' Possible ERROR while running compiler: conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.c(19) : error C2065: 'RTLD_LAZY' : undeclared identifier C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.c(19) : warning C4047: '=' : 'void *' differs in levels of indirection from 'int' C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.c(33) : error C2065: 'RTLD_LAZY' : undeclared identifier C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.c(33) : warning C4047: '=' : 'void *' differs in levels of indirection from 'int' ret = 512 Source: #include "confdefs.h" #include "conffix.h" #include #include #ifdef PETSC_HAVE_DLFCN_H #include #endif int main() { int argc = 1; char *argv[2] = {(char *) "conftest", NULL}; void *lib; int (*init)(int, char **); int (*checkInit)(void); lib = dlopen("/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/lib1.lib", RTLD_LAZY); if (!lib) { fprintf(stderr, "Could not open lib1.so: %s\n", dlerror()); exit(1); } init = (int (*)(int, char **)) dlsym(lib, "init"); if (!init) { fprintf(stderr, "Could not find initialization function\n"); exit(1); } if (!(*init)(argc, argv)) { fprintf(stderr, "Could not initialize library\n"); exit(1); } lib = dlopen("/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/lib2.lib", RTLD_LAZY); if (!lib) { fprintf(stderr, "Could not open lib2.so: %s\n", dlerror()); exit(1); } checkInit = (int (*)(void)) dlsym(lib, "checkInit"); if (!checkInit) { fprintf(stderr, "Could not find initialization check function\n"); exit(1); } if (!(*checkInit)()) { fprintf(stderr, "Did not link with shared library\n"); exit(2); } ; return 0; } Compile failed inside link Library was not shared Popping language C ================================================================================ TEST alternateConfigureLibrary from config.packages.hdf5(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/package.py:524) TESTING: alternateConfigureLibrary from config.packages.hdf5(config/BuildSystem/config/package.py:524) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.netcdf(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/package.py:524) TESTING: alternateConfigureLibrary from config.packages.netcdf(config/BuildSystem/config/package.py:524) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.netcdf-cxx(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/package.py:524) TESTING: alternateConfigureLibrary from config.packages.netcdf-cxx(config/BuildSystem/config/package.py:524) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.MOAB(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/package.py:524) TESTING: alternateConfigureLibrary from config.packages.MOAB(config/BuildSystem/config/package.py:524) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.exodusii(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/package.py:524) TESTING: alternateConfigureLibrary from config.packages.exodusii(config/BuildSystem/config/package.py:524) Called if --with-packagename=0; does nothing by default Pushing language C ================================================================================ TEST configureLibrary from PETSc.packages.valgrind(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/package.py:466) TESTING: configureLibrary from PETSc.packages.valgrind(config/BuildSystem/config/package.py:466) Find an installation and check if it can work with PETSc ================================================================================== Checking for a functional valgrind Not checking for library in Package specific search directory VALGRIND: [] because no functions given to check for ================================================================================ TEST check from config.libraries(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/libraries.py:145) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:145) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for headers Package specific search directory VALGRIND: [] Pushing language C ================================================================================ TEST checkInclude from config.headers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['valgrind/valgrind.h'] in [] Checking include with compiler flags var CPPFLAGS [] sh: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c Executing: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c sh: conftest.c #line 1 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 7 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 11 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 15 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 19 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 23 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 27 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 31 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 35 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 39 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 43 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 47 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 51 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 55 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 59 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 63 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 67 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 71 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 75 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 79 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 83 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 87 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 91 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 95 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 99 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 103 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 107 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 111 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 115 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 119 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 123 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 127 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 131 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 135 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 139 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 143 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 147 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 151 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 155 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 159 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 163 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 167 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 171 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 175 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 179 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 183 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 187 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 191 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 195 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 199 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 203 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 207 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 211 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 215 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 219 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 223 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 227 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 231 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 235 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 239 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 243 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 247 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 251 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 255 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 259 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 263 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 267 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 271 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 275 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 279 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 283 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 287 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 291 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 295 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 299 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 303 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 307 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 311 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 315 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 319 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 323 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 327 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 331 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 335 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 339 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 343 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 347 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 351 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 355 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 359 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 363 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 367 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 371 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 375 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 379 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 383 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 387 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 391 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 395 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 399 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 403 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 407 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 411 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 415 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 419 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 423 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 427 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 431 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 435 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 439 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 443 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 447 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 451 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 455 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 459 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 463 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 467 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 471 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 475 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 479 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 483 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 487 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 491 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 493 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 2 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" typedef int int32_t; typedef int mode_t; typedef int pid_t; #line 14 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 15 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 16 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 3 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.headers\conftest.c(3) : fatal error C1083: Cannot open include file: 'valgrind/valgrind.h': No such file or directory Possible ERROR while running preprocessor: ret = 512 Source: #include "confdefs.h" #include "conffix.h" #include Popping language C Not checking for library in Package specific search directory VALGRIND: [] because no functions given to check for ================================================================================ TEST check from config.libraries(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/libraries.py:145) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:145) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for headers Package specific search directory VALGRIND: [] Pushing language C ================================================================================ TEST checkInclude from config.headers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['valgrind/valgrind.h'] in [] Checking include with compiler flags var CPPFLAGS [] sh: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c Executing: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c sh: conftest.c #line 1 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 7 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 11 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 15 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 19 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" 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"c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 67 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 71 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 75 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 79 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 83 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 87 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 91 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 95 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 99 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 103 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 107 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 111 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 115 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 119 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 123 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 127 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 131 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 135 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 139 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 143 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 147 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 151 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 155 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 159 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 163 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 167 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 171 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 175 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 179 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 183 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"c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 387 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 391 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 395 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 399 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 403 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 407 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 411 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 415 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 419 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 423 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 427 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 431 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 435 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 439 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 443 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 447 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 451 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 455 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 459 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 463 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 467 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 471 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 475 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 479 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 483 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 487 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 491 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 493 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 2 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" typedef int int32_t; typedef int mode_t; typedef int pid_t; #line 14 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 15 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 16 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 3 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.headers\conftest.c(3) : fatal error C1083: Cannot open include file: 'valgrind/valgrind.h': No such file or directory Possible ERROR while running preprocessor: ret = 512 Source: #include "confdefs.h" #include "conffix.h" #include Popping language C Not checking for library in Package specific search directory VALGRIND: [] because no functions given to check for ================================================================================ TEST check from config.libraries(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/libraries.py:145) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:145) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for headers Package specific search directory VALGRIND: ['/usr/local/include'] Pushing language C ================================================================================ TEST checkInclude from config.headers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['valgrind/valgrind.h'] in ['/usr/local/include'] Checking include with compiler flags var CPPFLAGS ['/usr/local/include'] sh: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/usr/local/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c Executing: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/usr/local/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c sh: conftest.c #line 1 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 7 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 11 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 15 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 19 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 23 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 27 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 31 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 35 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 39 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 43 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 47 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 51 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 55 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 59 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 63 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 67 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 71 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 75 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 79 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 83 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 87 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 91 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 95 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 99 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 103 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 107 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 111 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 115 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 119 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 123 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 127 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 131 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 135 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 139 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 143 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 147 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 151 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 155 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 159 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 163 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 167 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 171 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 175 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 179 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 183 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 187 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 191 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 195 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 199 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 203 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 207 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 211 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 215 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 219 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 223 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 227 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 231 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 235 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 239 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 243 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 247 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 251 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 255 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 259 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 263 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 267 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 271 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 275 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 279 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 283 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 287 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 291 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 295 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 299 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 303 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 307 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 311 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 315 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 319 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 323 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 327 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 331 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 335 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 339 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 343 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 347 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 351 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 355 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 359 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 363 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 367 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 371 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 375 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 379 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 383 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 387 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 391 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 395 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 399 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 403 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 407 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 411 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 415 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 419 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 423 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 427 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 431 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 435 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 439 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 443 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 447 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 451 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 455 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 459 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 463 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 467 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 471 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 475 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 479 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 483 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 487 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 491 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 493 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 2 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" typedef int int32_t; typedef int mode_t; typedef int pid_t; #line 14 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 15 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 16 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 3 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.headers\conftest.c(3) : fatal error C1083: Cannot open include file: 'valgrind/valgrind.h': No such file or directory Possible ERROR while running preprocessor: ret = 512 Source: #include "confdefs.h" #include "conffix.h" #include Popping language C Not checking for library in Package specific search directory VALGRIND: [] because no functions given to check for ================================================================================ TEST check from config.libraries(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/libraries.py:145) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:145) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for headers Package specific search directory VALGRIND: ['/usr/local/include'] Pushing language C ================================================================================ TEST checkInclude from config.headers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['valgrind/valgrind.h'] in ['/usr/local/include'] Checking include with compiler flags var CPPFLAGS ['/usr/local/include'] sh: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/usr/local/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c Executing: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/usr/local/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c sh: conftest.c #line 1 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 7 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 11 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 15 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 19 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 23 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 27 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 31 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 35 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 39 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 43 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 47 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 51 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 55 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 59 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 63 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 67 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 71 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 75 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 79 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 83 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 87 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 91 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 95 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 99 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 103 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 107 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 111 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 115 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 119 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 123 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 127 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 131 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 135 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 139 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 143 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 147 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 151 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 155 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 159 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 163 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 167 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 171 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 175 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 179 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 183 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 187 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 191 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 195 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 199 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 203 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 207 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 211 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 215 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 219 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 223 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 227 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 231 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 235 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 239 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 243 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 247 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 251 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 255 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 259 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 263 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 267 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 271 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 275 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 279 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 283 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 287 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 291 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 295 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 299 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 303 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 307 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 311 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 315 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 319 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 323 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 327 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 331 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 335 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 339 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 343 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 347 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 351 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 355 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 359 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 363 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 367 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 371 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 375 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 379 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 383 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 387 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 391 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 395 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 399 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 403 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 407 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 411 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 415 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 419 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 423 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 427 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 431 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 435 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 439 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 443 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 447 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 451 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 455 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 459 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 463 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 467 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 471 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 475 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 479 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 483 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 487 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 491 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 493 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 2 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" typedef int int32_t; typedef int mode_t; typedef int pid_t; #line 14 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 15 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 16 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 3 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.headers\conftest.c(3) : fatal error C1083: Cannot open include file: 'valgrind/valgrind.h': No such file or directory Possible ERROR while running preprocessor: ret = 512 Source: #include "confdefs.h" #include "conffix.h" #include Popping language C Directory does not exist: /opt/local (while checking "Package specific search directory VALGRIND" for "[]") Directory does not exist: /opt/local (while checking "Package specific search directory VALGRIND" for "[]") sh: uname -s Executing: uname -s sh: CYGWIN_NT-6.1-WOW64 sh: uname -s Executing: uname -s sh: CYGWIN_NT-6.1-WOW64 Popping language C ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.threadcomm(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/package.py:524) TESTING: alternateConfigureLibrary from PETSc.packages.threadcomm(config/BuildSystem/config/package.py:524) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.tetgen(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/package.py:524) TESTING: alternateConfigureLibrary from PETSc.packages.tetgen(config/BuildSystem/config/package.py:524) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.sprng(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/package.py:524) TESTING: alternateConfigureLibrary from PETSc.packages.sprng(config/BuildSystem/config/package.py:524) Called if --with-packagename=0; does nothing by default Not a clone of PETSc, don't need Sowing ================================================================================ TEST alternateConfigureLibrary from config.packages.boost(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/package.py:524) TESTING: alternateConfigureLibrary from config.packages.boost(config/BuildSystem/config/package.py:524) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.Sieve(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/package.py:524) TESTING: alternateConfigureLibrary from PETSc.packages.Sieve(config/BuildSystem/config/package.py:524) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.yaml(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/package.py:524) TESTING: alternateConfigureLibrary from PETSc.packages.yaml(config/BuildSystem/config/package.py:524) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.PVODE(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/package.py:524) TESTING: alternateConfigureLibrary from PETSc.packages.PVODE(config/BuildSystem/config/package.py:524) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.pcbddc(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/package.py:524) TESTING: alternateConfigureLibrary from PETSc.packages.pcbddc(config/BuildSystem/config/package.py:524) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.PARTY(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/package.py:524) TESTING: alternateConfigureLibrary from PETSc.packages.PARTY(config/BuildSystem/config/package.py:524) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.papi(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/package.py:524) TESTING: alternateConfigureLibrary from PETSc.packages.papi(config/BuildSystem/config/package.py:524) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.pami(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/package.py:524) TESTING: alternateConfigureLibrary from PETSc.packages.pami(config/BuildSystem/config/package.py:524) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.P3Dlib(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/package.py:524) TESTING: alternateConfigureLibrary from PETSc.packages.P3Dlib(config/BuildSystem/config/package.py:524) Called if --with-packagename=0; does nothing by default Pushing language C ================================================================================ TEST configureLibrary from PETSc.packages.pthread(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/PETSc/packages/pthread.py:27) TESTING: configureLibrary from PETSc.packages.pthread(config/PETSc/packages/pthread.py:27) Checks for pthread_barrier_t, cpu_set_t, and sys/sysctl.h ================================================================================== Checking for a functional pthread Checking for library in Package specific search directory PTHREAD: ['libpthread.a'] ================================================================================ TEST check from config.libraries(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/libraries.py:145) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:145) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for function pthread_create in library ['libpthread.a'] [] Pushing language C sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char pthread_create(); int main() { pthread_create() ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -lpthread Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -lpthread Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : fatal error LNK1104: cannot open file 'libpthread.lib' Possible ERROR while running linker: output: LINK : fatal error LNK1104: cannot open file 'libpthread.lib' ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -lpthread Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char pthread_create(); int main() { pthread_create() ; return 0; } Popping language C Checking for library in Package specific search directory PTHREAD: ['lib64/libpthread.a'] ================================================================================ TEST check from config.libraries(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/libraries.py:145) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:145) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for function pthread_create in library ['lib64/libpthread.a'] [] Pushing language C sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char pthread_create(); int main() { pthread_create() ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -lpthread Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -lpthread Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : fatal error LNK1104: cannot open file 'libpthread.lib' Possible ERROR while running linker: output: LINK : fatal error LNK1104: cannot open file 'libpthread.lib' ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -lpthread Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char pthread_create(); int main() { pthread_create() ; return 0; } Popping language C All intermediate test results are stored in /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.packages.pthread sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.packages.pthread/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.packages.pthread -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.packages.pthread/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.packages.pthread/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.packages.pthread -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.packages.pthread/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { pthread_barrier_t *a; ; return 0; } Defined "HAVE_PTHREAD_BARRIER_T" to "1" sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.packages.pthread/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.packages.pthread -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.packages.pthread/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.packages.pthread/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.packages.pthread -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.packages.pthread/conftest.c sh: conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\PETSc.packages.pthread\conftest.c(6) : error C2065: 'cpu_set_t' : undeclared identifier C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\PETSc.packages.pthread\conftest.c(6) : error C2065: 'a' : undeclared identifier C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\PETSc.packages.pthread\conftest.c(6) : warning C4552: '*' : operator has no effect; expected operator with side-effect Possible ERROR while running compiler: conftest.c C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\PETSc.packages.pthread\conftest.c(6) : error C2065: 'cpu_set_t' : undeclared identifier C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\PETSc.packages.pthread\conftest.c(6) : error C2065: 'a' : undeclared identifier C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\PETSc.packages.pthread\conftest.c(6) : warning C4552: '*' : operator has no effect; expected operator with side-effect ret = 512 Source: #include "confdefs.h" #include "conffix.h" #include int main() { cpu_set_t *a; ; return 0; } sh: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.packages.pthread -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.packages.pthread/conftest.c Executing: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.packages.pthread -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.packages.pthread/conftest.c sh: conftest.c #line 1 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\PETSc.packages.pthread\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 7 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 11 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 15 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 19 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 23 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 27 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 31 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 35 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 39 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 43 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 47 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 51 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 55 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 59 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 63 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 67 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 71 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 75 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 79 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 83 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 87 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 91 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 95 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 99 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 103 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 107 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 111 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 115 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 119 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 123 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 127 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 131 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 135 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 139 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 143 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 147 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 151 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 155 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 159 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 163 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 167 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 171 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 175 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 179 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 183 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 187 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 191 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 195 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 199 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 203 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 207 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 211 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 215 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 219 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 223 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 227 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 231 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 235 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 239 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 243 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 247 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 251 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 255 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 259 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 263 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 267 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 271 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 275 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 279 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 283 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 287 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 291 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 295 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 299 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 303 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 307 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 311 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 315 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 319 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 323 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 327 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 331 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 335 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 339 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 343 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 347 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 351 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 355 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 359 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 363 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 367 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 371 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 375 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 379 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 383 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 387 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 391 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 395 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 399 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 403 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 407 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 411 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 415 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 419 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 423 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 427 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 431 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 435 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 439 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 443 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 447 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 451 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 455 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 459 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 463 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 467 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 471 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 475 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 479 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 483 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 487 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 491 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 495 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 497 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\confdefs.h" #line 2 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\PETSc.packages.pthread\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\conffix.h" typedef int int32_t; typedef int mode_t; typedef int pid_t; #line 14 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\conffix.h" #line 15 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\conffix.h" #line 16 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\petsc.packages.pthread\\conffix.h" #line 3 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\PETSc.packages.pthread\\conftest.c" C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\PETSc.packages.pthread\conftest.c(3) : fatal error C1083: Cannot open include file: 'sys/sysctl.h': No such file or directory Possible ERROR while running preprocessor: ret = 512 Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST checkSharedLibrary from PETSc.packages.pthread(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/package.py:520) TESTING: checkSharedLibrary from PETSc.packages.pthread(config/BuildSystem/config/package.py:520) By default we don't care about checking if the library is shared Popping language C ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.pthreadclasses(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/package.py:524) TESTING: alternateConfigureLibrary from PETSc.packages.pthreadclasses(config/BuildSystem/config/package.py:524) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.openmp(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/package.py:524) TESTING: alternateConfigureLibrary from PETSc.packages.openmp(config/BuildSystem/config/package.py:524) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.PTScotch(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/package.py:524) TESTING: alternateConfigureLibrary from PETSc.packages.PTScotch(config/BuildSystem/config/package.py:524) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.Numpy(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/package.py:524) TESTING: alternateConfigureLibrary from PETSc.packages.Numpy(config/BuildSystem/config/package.py:524) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.mpe(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/package.py:524) TESTING: alternateConfigureLibrary from PETSc.packages.mpe(config/BuildSystem/config/package.py:524) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.Matlab(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/PETSc/packages/Matlab.py:36) TESTING: alternateConfigureLibrary from PETSc.packages.Matlab(config/PETSc/packages/Matlab.py:36) ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.MatlabEngine(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/package.py:524) TESTING: alternateConfigureLibrary from PETSc.packages.MatlabEngine(config/BuildSystem/config/package.py:524) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.Mathematica(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/package.py:524) TESTING: alternateConfigureLibrary from PETSc.packages.Mathematica(config/BuildSystem/config/package.py:524) Called if --with-packagename=0; does nothing by default Not a clone of PETSc, don't need Lgrind ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.hwloc(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/package.py:524) TESTING: alternateConfigureLibrary from PETSc.packages.hwloc(config/BuildSystem/config/package.py:524) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.opengl(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/package.py:524) TESTING: alternateConfigureLibrary from PETSc.packages.opengl(config/BuildSystem/config/package.py:524) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.glut(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/package.py:524) TESTING: alternateConfigureLibrary from PETSc.packages.glut(config/BuildSystem/config/package.py:524) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.Generator(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/package.py:524) TESTING: alternateConfigureLibrary from PETSc.packages.Generator(config/BuildSystem/config/package.py:524) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.fftw(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/package.py:524) TESTING: alternateConfigureLibrary from PETSc.packages.fftw(config/BuildSystem/config/package.py:524) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.scientificpython(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/package.py:524) TESTING: alternateConfigureLibrary from config.packages.scientificpython(config/BuildSystem/config/package.py:524) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.fiat(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/package.py:524) TESTING: alternateConfigureLibrary from config.packages.fiat(config/BuildSystem/config/package.py:524) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.FFC(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/package.py:524) TESTING: alternateConfigureLibrary from PETSc.packages.FFC(config/BuildSystem/config/package.py:524) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.expat(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/package.py:524) TESTING: alternateConfigureLibrary from PETSc.packages.expat(config/BuildSystem/config/package.py:524) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.thrust(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/package.py:524) TESTING: alternateConfigureLibrary from config.packages.thrust(config/BuildSystem/config/package.py:524) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.cusp(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/package.py:524) TESTING: alternateConfigureLibrary from config.packages.cusp(config/BuildSystem/config/package.py:524) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.txpetscgpu(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/package.py:524) TESTING: alternateConfigureLibrary from PETSc.packages.txpetscgpu(config/BuildSystem/config/package.py:524) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.cuda(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/package.py:524) TESTING: alternateConfigureLibrary from PETSc.packages.cuda(config/BuildSystem/config/package.py:524) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.ctetgen(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/package.py:524) TESTING: alternateConfigureLibrary from PETSc.packages.ctetgen(config/BuildSystem/config/package.py:524) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.Suggar(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/package.py:524) TESTING: alternateConfigureLibrary from PETSc.packages.Suggar(config/BuildSystem/config/package.py:524) Called if --with-packagename=0; does nothing by default Checking for program /usr/bin/cmake...found Defined make macro "CMAKE" to "/usr/bin/cmake" Defined make macro "CMAKE " to "/usr/bin/cmake" Pushing language C ================================================================================ TEST configureLibrary from PETSc.packages.metis(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/package.py:466) TESTING: configureLibrary from PETSc.packages.metis(config/BuildSystem/config/package.py:466) Find an installation and check if it can work with PETSc ================================================================================== Checking for a functional metis Checking for library in User specified METIS libraries: ['/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib'] Contents: ['include', 'lib'] ================================================================================ TEST check from config.libraries(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/libraries.py:145) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:145) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for function METIS_PartGraphKway in library ['/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib'] [] Pushing language C sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.packages.pthread -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.packages.pthread -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char METIS_PartGraphKway(); int main() { METIS_PartGraphKway() ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: Defined "HAVE_LIBMETIS" to "1" Popping language C Checking for headers User specified METIS libraries: ['/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include'] Pushing language C ================================================================================ TEST checkInclude from config.headers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['metis.h'] in ['/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include'] Checking include with compiler flags var CPPFLAGS ['/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include'] sh: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.packages.pthread -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c Executing: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.packages.pthread -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c sh: conftest.c #line 1 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 7 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 11 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 15 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 19 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 23 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 27 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 31 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 35 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 39 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 43 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 47 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 51 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 55 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 59 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 63 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 67 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 71 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 75 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 79 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"c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 283 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 287 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 291 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 295 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 299 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 303 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 307 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 311 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 315 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 319 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 323 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 327 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 331 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 335 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 339 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 343 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 347 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 351 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 355 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 359 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 363 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 367 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 371 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 375 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 379 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 383 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 387 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 391 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 395 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 399 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 403 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 407 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 411 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 415 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 419 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 423 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 427 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 431 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 435 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 439 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 443 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 447 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 451 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 455 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 459 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 463 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 467 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 471 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 475 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 479 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 483 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 487 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 491 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 495 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 499 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 501 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 2 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" typedef int int32_t; typedef int mode_t; typedef int pid_t; #line 14 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 15 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 16 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 3 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "C:\\Users\\fraphel\\Downloads\\parmetis\\metis\\include\\metis.h" #line 56 "C:\\Users\\fraphel\\Downloads\\parmetis\\metis\\include\\metis.h" #line 59 "C:\\Users\\fraphel\\Downloads\\parmetis\\metis\\include\\metis.h" #line 62 "C:\\Users\\fraphel\\Downloads\\parmetis\\metis\\include\\metis.h" #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\limits.h" #pragma once #line 18 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\limits.h" #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 22 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 23 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 38 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 42 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 65 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 67 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\crtdefs.h" #line 1 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #pragma once #line 112 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 117 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 122 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 123 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 145 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" #line 149 "C:\\Program Files (x86)\\Microsoft Visual Studio 9.0\\VC\\INCLUDE\\sal.h" Found header files ['metis.h'] in ['/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include'] Popping language C ================================================================================ TEST checkSharedLibrary from PETSc.packages.metis(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/package.py:520) TESTING: checkSharedLibrary from PETSc.packages.metis(config/BuildSystem/config/package.py:520) By default we don't care about checking if the library is shared Popping language C Pushing language C ================================================================================ TEST configureLibrary from PETSc.packages.parmetis(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/package.py:466) TESTING: configureLibrary from PETSc.packages.parmetis(config/BuildSystem/config/package.py:466) Find an installation and check if it can work with PETSc ================================================================================== Checking for a functional parmetis Checking for library in User specified PARMETIS libraries: ['/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib'] Contents: ['include', 'lib'] ================================================================================ TEST check from config.libraries(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/libraries.py:145) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:145) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for function ParMETIS_V3_PartKway in library ['/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib'] ['/cygdrive/c/Program Files (x86)/MPICH2/lib/mpi.lib', '/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib'] Pushing language C sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.packages.pthread -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.packages.pthread -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char ParMETIS_V3_PartKway(); int main() { ParMETIS_V3_PartKway() ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/mpi.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.exe not found or not built by the last incremental link; performing full link Defined "HAVE_LIBPARMETIS" to "1" Popping language C Checking for headers User specified PARMETIS libraries: ['/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include'] Pushing language C ================================================================================ TEST checkInclude from config.headers(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['parmetis.h'] in ['/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include'] Checking include with compiler flags var CPPFLAGS ['/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include', '/cygdrive/c/Program Files (x86)/MPICH2/include', '/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include'] sh: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.packages.pthread -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c Executing: win32fe cl -E -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.packages.pthread -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/include /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers/conftest.c sh: conftest.c #line 1 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 7 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 11 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 15 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 19 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 23 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 27 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 31 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 35 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 39 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 43 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 47 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 51 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 55 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 59 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 63 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 67 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 71 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 75 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 79 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 83 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 87 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 91 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 95 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 99 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 103 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 107 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 111 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 115 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 119 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 123 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 127 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 131 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 135 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 139 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 143 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 147 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 151 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 155 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 159 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 163 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 167 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 171 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 175 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 179 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 183 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 187 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 191 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 195 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 199 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 203 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 207 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 211 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 215 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 219 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 223 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 227 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 231 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 235 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 239 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 243 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 247 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 251 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 255 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 259 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 263 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 267 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 271 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 275 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 279 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 283 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 287 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 291 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 295 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 299 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 303 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 307 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 311 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 315 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 319 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 323 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 327 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 331 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 335 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 339 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 343 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 347 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 351 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 355 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 359 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 363 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 367 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 371 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 375 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 379 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 383 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 387 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 391 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 395 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 399 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 403 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 407 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 411 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 415 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 419 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 423 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 427 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 431 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 435 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 439 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 443 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 447 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 451 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 455 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 459 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 463 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 467 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 471 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 475 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 479 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 483 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 487 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 491 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 495 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 499 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 503 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 505 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\confdefs.h" #line 2 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" typedef int int32_t; typedef int mode_t; typedef int pid_t; #line 14 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 15 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 16 "c:\\users\\fraphel\\appdata\\local\\temp\\petsc-fwwje2\\config.headers\\conffix.h" #line 3 "C:\\Users\\fraphel\\AppData\\Local\\Temp\\petsc-FwWJe2\\config.headers\\conftest.c" #line 1 "C:\\Users\\fraphel\\Downloads\\parmetis\\parmetis\\include\\parmetis.h" #line 1 "C:\\Program Files (x86)\\MPICH2\\include\\mpi.h" #line 16 "C:\\Program Files (x86)\\MPICH2\\include\\mpi.h" typedef int MPI_Datatype; typedef int MPI_Comm; typedef int MPI_Group; typedef int MPI_Win; typedef struct ADIOI_FileD *MPI_File; typedef int MPI_Op; extern int MPICH_ATTR_FAILED_PROCESSES; typedef enum MPIR_Topo_type { MPI_GRAPH=1, MPI_CART=2, MPI_DIST_GRAPH=3 } MPIR_Topo_type; typedef void (MPI_Handler_function) ( MPI_Comm *, int *, ... ); typedef int (MPI_Comm_copy_attr_function)(MPI_Comm, int, void *, void *, void *, int *); typedef int (MPI_Comm_delete_attr_function)(MPI_Comm, int, void *, void *); typedef int (MPI_Type_copy_attr_function)(MPI_Datatype, int, void *, void *, void *, int *); typedef int (MPI_Type_delete_attr_function)(MPI_Datatype, int, void *, void *); typedef int (MPI_Win_copy_attr_function)(MPI_Win, int, void *, void *, void *, int *); typedef int (MPI_Win_delete_attr_function)(MPI_Win, int, void *, void *); typedef void (MPI_Comm_errhandler_function)(MPI_Comm *, int *, ...); typedef void (MPI_File_errhandler_function)(MPI_File *, int *, ...); typedef void (MPI_Win_errhandler_function)(MPI_Win *, int *, ...); typedef MPI_Comm_errhandler_function MPI_Comm_errhandler_fn; typedef MPI_File_errhandler_function MPI_File_errhandler_fn; typedef MPI_Win_errhandler_function MPI_Win_errhandler_fn; typedef int MPI_Errhandler; typedef int MPI_Request; typedef void (MPI_User_function) ( void *, void *, int *, MPI_Datatype * ); typedef int (MPI_Copy_function) ( MPI_Comm, int, void *, void *, void *, int * ); typedef int (MPI_Delete_function) ( MPI_Comm, int, void *, void * ); enum MPIR_Combiner_enum { MPI_COMBINER_NAMED = 1, MPI_COMBINER_DUP = 2, MPI_COMBINER_CONTIGUOUS = 3, MPI_COMBINER_VECTOR = 4, MPI_COMBINER_HVECTOR_INTEGER = 5, MPI_COMBINER_HVECTOR = 6, MPI_COMBINER_INDEXED = 7, MPI_COMBINER_HINDEXED_INTEGER = 8, MPI_COMBINER_HINDEXED = 9, MPI_COMBINER_INDEXED_BLOCK = 10, MPI_COMBINER_STRUCT_INTEGER = 11, MPI_COMBINER_STRUCT = 12, MPI_COMBINER_SUBARRAY = 13, MPI_COMBINER_DARRAY = 14, MPI_COMBINER_F90_REAL = 15, MPI_COMBINER_F90_COMPLEX = 16, MPI_COMBINER_F90_INTEGER = 17, MPI_COMBINER_RESIZED = 18 }; typedef int MPI_Info; typedef int MPI_Aint; typedef int MPI_Fint; #line 388 "C:\\Program Files (x86)\\MPICH2\\include\\mpi.h" typedef __int64 MPI_Offset; #line 390 "C:\\Program Files (x86)\\MPICH2\\include\\mpi.h" typedef struct MPI_Status { int count; int cancelled; int MPI_SOURCE; int MPI_TAG; int MPI_ERROR; } MPI_Status; #line 452 "C:\\Program Files (x86)\\MPICH2\\include\\mpi.h" #line 453 "C:\\Program Files (x86)\\MPICH2\\include\\mpi.h" extern __declspec(dllimport) MPI_Fint * MPI_F_STATUS_IGNORE; extern __declspec(dllimport) MPI_Fint * MPI_F_STATUSES_IGNORE; Found header files ['parmetis.h'] in ['/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include'] Popping language C ================================================================================ TEST checkSharedLibrary from PETSc.packages.parmetis(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/package.py:520) TESTING: checkSharedLibrary from PETSc.packages.parmetis(config/BuildSystem/config/package.py:520) By default we don't care about checking if the library is shared Popping language C ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.Chaco(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/package.py:524) TESTING: alternateConfigureLibrary from PETSc.packages.Chaco(config/BuildSystem/config/package.py:524) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.ccafe(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/package.py:524) TESTING: alternateConfigureLibrary from PETSc.packages.ccafe(config/BuildSystem/config/package.py:524) Called if --with-packagename=0; does nothing by default Not a clone of PETSc, don't need c2html ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.babel(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/package.py:524) TESTING: alternateConfigureLibrary from PETSc.packages.babel(config/BuildSystem/config/package.py:524) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.java(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/package.py:524) TESTING: alternateConfigureLibrary from PETSc.packages.java(config/BuildSystem/config/package.py:524) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.ams(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/package.py:524) TESTING: alternateConfigureLibrary from PETSc.packages.ams(config/BuildSystem/config/package.py:524) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.server(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/package.py:524) TESTING: alternateConfigureLibrary from PETSc.packages.server(config/BuildSystem/config/package.py:524) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.X(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/package.py:524) TESTING: alternateConfigureLibrary from PETSc.packages.X(config/BuildSystem/config/package.py:524) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.Zoltan(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/package.py:524) TESTING: alternateConfigureLibrary from PETSc.packages.Zoltan(config/BuildSystem/config/package.py:524) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.Triangle(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/package.py:524) TESTING: alternateConfigureLibrary from PETSc.packages.Triangle(config/BuildSystem/config/package.py:524) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.afterimage(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/package.py:524) TESTING: alternateConfigureLibrary from PETSc.packages.afterimage(config/BuildSystem/config/package.py:524) Called if --with-packagename=0; does nothing by default ================================================================================ TEST configureRegression from PETSc.utilities.Regression(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/PETSc/utilities/Regression.py:32) TESTING: configureRegression from PETSc.utilities.Regression(config/PETSc/utilities/Regression.py:32) Output a file listing the jobs that should be run by the PETSc buildtest Defined make macro "TEST_RUNS" to "C METIS PARMETIS C_NoComplex" ================================================================================ TEST alternateConfigureLibrary from config.packages.f2cblaslapack(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/package.py:524) TESTING: alternateConfigureLibrary from config.packages.f2cblaslapack(config/BuildSystem/config/package.py:524) Called if --with-packagename=0; does nothing by default ================================================================================ TEST configureLibrary from config.packages.BlasLapack(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/packages/BlasLapack.py:441) TESTING: configureLibrary from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:441) ================================================================================ Checking for a functional BLAS and LAPACK in User specified BLAS/LAPACK library ================================================================================ TEST checkLib from config.packages.BlasLapack(/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/packages/BlasLapack.py:113) TESTING: checkLib from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:113) Checking for BLAS and LAPACK symbols Checking for function ddot in library ['/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/lib/BLAS.lib', '/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/lib/clapack.lib'] [] Pushing language C sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.packages.pthread -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.packages.pthread -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char ddot(); int main() { ddot() ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Users/fraphel/Downloads/blaslapack/new/lib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/new/lib/clapack.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Users/fraphel/Downloads/blaslapack/new/lib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/new/lib/clapack.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.exe not found or not built by the last incremental link; performing full link conftest.obj : error LNK2019: unresolved external symbol _ddot referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: output: LINK : C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.exe not found or not built by the last incremental link; performing full link conftest.obj : error LNK2019: unresolved external symbol _ddot referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.exe : fatal error LNK1120: 1 unresolved externals ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Users/fraphel/Downloads/blaslapack/new/lib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/new/lib/clapack.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char ddot(); int main() { ddot() ; return 0; } Popping language C Checking for no name mangling on BLAS/LAPACK Checking for function ddot in library ['/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/lib/BLAS.lib', '/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/lib/clapack.lib'] [] Pushing language C sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.packages.pthread -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.packages.pthread -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char ddot(); int main() { ddot() ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Users/fraphel/Downloads/blaslapack/new/lib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/new/lib/clapack.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Users/fraphel/Downloads/blaslapack/new/lib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/new/lib/clapack.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: conftest.obj : error LNK2019: unresolved external symbol _ddot referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: output: conftest.obj : error LNK2019: unresolved external symbol _ddot referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.exe : fatal error LNK1120: 1 unresolved externals ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Users/fraphel/Downloads/blaslapack/new/lib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/new/lib/clapack.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char ddot(); int main() { ddot() ; return 0; } Popping language C Checking for function dgetrs in library ['/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/lib/BLAS.lib', '/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/lib/clapack.lib'] [] Pushing language C sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.packages.pthread -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.packages.pthread -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dgetrs(); int main() { dgetrs() ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Users/fraphel/Downloads/blaslapack/new/lib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/new/lib/clapack.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Users/fraphel/Downloads/blaslapack/new/lib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/new/lib/clapack.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: conftest.obj : error LNK2019: unresolved external symbol _dgetrs referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: output: conftest.obj : error LNK2019: unresolved external symbol _dgetrs referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.exe : fatal error LNK1120: 1 unresolved externals ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Users/fraphel/Downloads/blaslapack/new/lib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/new/lib/clapack.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dgetrs(); int main() { dgetrs() ; return 0; } Popping language C Checking for function dgeev in library ['/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/lib/BLAS.lib', '/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/lib/clapack.lib'] [] Pushing language C sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.packages.pthread -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.packages.pthread -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dgeev(); int main() { dgeev() ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Users/fraphel/Downloads/blaslapack/new/lib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/new/lib/clapack.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Users/fraphel/Downloads/blaslapack/new/lib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/new/lib/clapack.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: conftest.obj : error LNK2019: unresolved external symbol _dgeev referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: output: conftest.obj : error LNK2019: unresolved external symbol _dgeev referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.exe : fatal error LNK1120: 1 unresolved externals ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Users/fraphel/Downloads/blaslapack/new/lib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/new/lib/clapack.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dgeev(); int main() { dgeev() ; return 0; } Popping language C Checking for underscore name mangling on BLAS/LAPACK Checking for function ddot_ in library ['/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/lib/BLAS.lib', '/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/lib/clapack.lib'] [] Pushing language C sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.packages.pthread -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.packages.pthread -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char ddot_(); int main() { ddot_() ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Users/fraphel/Downloads/blaslapack/new/lib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/new/lib/clapack.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Users/fraphel/Downloads/blaslapack/new/lib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/new/lib/clapack.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: conftest.obj : error LNK2019: unresolved external symbol _ddot_ referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: output: conftest.obj : error LNK2019: unresolved external symbol _ddot_ referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.exe : fatal error LNK1120: 1 unresolved externals ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Users/fraphel/Downloads/blaslapack/new/lib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/new/lib/clapack.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char ddot_(); int main() { ddot_() ; return 0; } Popping language C Checking for function dgetrs_ in library ['/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/lib/BLAS.lib', '/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/lib/clapack.lib'] [] Pushing language C sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.packages.pthread -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.packages.pthread -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dgetrs_(); int main() { dgetrs_() ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Users/fraphel/Downloads/blaslapack/new/lib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/new/lib/clapack.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Users/fraphel/Downloads/blaslapack/new/lib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/new/lib/clapack.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _sdot_ referenced in function _f2c_sdot f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ddot_ referenced in function _f2c_ddot f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _cdotu_ referenced in function _f2c_cdotu f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _cdotc_ referenced in function _f2c_cdotc f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zdotu_ referenced in function _f2c_zdotu f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zdotc_ referenced in function _f2c_zdotc f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _snrm2_ referenced in function _f2c_snrm2 f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _sasum_ referenced in function _f2c_sasum f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dnrm2_ referenced in function _f2c_dnrm2 f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dasum_ referenced in function _f2c_dasum f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _scnrm2_ referenced in function _f2c_scnrm2 f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _scasum_ referenced in function _f2c_scasum f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dznrm2_ referenced in function _f2c_dznrm2 f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dzasum_ referenced in function _f2c_dzasum f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _isamax_ referenced in function _f2c_isamax f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _idamax_ referenced in function _f2c_idamax f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _icamax_ referenced in function _f2c_icamax f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _izamax_ referenced in function _f2c_izamax f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _sswap_ referenced in function _f2c_sswap f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _scopy_ referenced in function _f2c_scopy f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _saxpy_ referenced in function _f2c_saxpy f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dswap_ referenced in function _f2c_dswap f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dcopy_ referenced in function _f2c_dcopy f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _daxpy_ referenced in function _f2c_daxpy f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _cswap_ referenced in function _f2c_cswap f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ccopy_ referenced in function _f2c_ccopy f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _caxpy_ referenced in function _f2c_caxpy f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zswap_ referenced in function _f2c_zswap f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zcopy_ referenced in function _f2c_zcopy f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zaxpy_ referenced in function _f2c_zaxpy f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _srotg_ referenced in function _f2c_srotg f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _srot_ referenced in function _f2c_srot f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _drotg_ referenced in function _f2c_drotg f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _drot_ referenced in function _f2c_drot f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _sscal_ referenced in function _f2c_sscal f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dscal_ referenced in function _f2c_dscal f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _cscal_ referenced in function _f2c_cscal f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zscal_ referenced in function _f2c_zscal f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _csscal_ referenced in function _f2c_csscal f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zdscal_ referenced in function _f2c_zdscal f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _sgemv_ referenced in function _f2c_sgemv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _sgbmv_ referenced in function _f2c_sgbmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _strmv_ referenced in function _f2c_strmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _stbmv_ referenced in function _f2c_stbmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _stpmv_ referenced in function _f2c_stpmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _strsv_ referenced in function _f2c_strsv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _stbsv_ referenced in function _f2c_stbsv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _stpsv_ referenced in function _f2c_stpsv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dgemv_ referenced in function _f2c_dgemv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dgbmv_ referenced in function _f2c_dgbmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dtrmv_ referenced in function _f2c_dtrmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dtbmv_ referenced in function _f2c_dtbmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dtpmv_ referenced in function _f2c_dtpmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dtrsv_ referenced in function _f2c_dtrsv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dtbsv_ referenced in function _f2c_dtbsv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dtpsv_ referenced in function _f2c_dtpsv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _cgemv_ referenced in function _f2c_cgemv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _cgbmv_ referenced in function _f2c_cgbmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ctrmv_ referenced in function _f2c_ctrmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ctbmv_ referenced in function _f2c_ctbmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ctpmv_ referenced in function _f2c_ctpmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ctrsv_ referenced in function _f2c_ctrsv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ctbsv_ referenced in function _f2c_ctbsv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ctpsv_ referenced in function _f2c_ctpsv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zgemv_ referenced in function _f2c_zgemv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zgbmv_ referenced in function _f2c_zgbmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ztrmv_ referenced in function _f2c_ztrmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ztbmv_ referenced in function _f2c_ztbmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ztpmv_ referenced in function _f2c_ztpmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ztrsv_ referenced in function _f2c_ztrsv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ztbsv_ referenced in function _f2c_ztbsv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ztpsv_ referenced in function _f2c_ztpsv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ssymv_ referenced in function _f2c_ssymv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ssbmv_ referenced in function _f2c_ssbmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _sspmv_ referenced in function _f2c_sspmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _sger_ referenced in function _f2c_sger f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ssyr_ referenced in function _f2c_ssyr f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _sspr_ referenced in function _f2c_sspr f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ssyr2_ referenced in function _f2c_ssyr2 f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _sspr2_ referenced in function _f2c_sspr2 f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dsymv_ referenced in function _f2c_dsymv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dsbmv_ referenced in function _f2c_dsbmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dspmv_ referenced in function _f2c_dspmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dger_ referenced in function _f2c_dger f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dsyr_ referenced in function _f2c_dsyr f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dspr_ referenced in function _f2c_dspr f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dsyr2_ referenced in function _f2c_dsyr2 f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dspr2_ referenced in function _f2c_dspr2 f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _chemv_ referenced in function _f2c_chemv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _chbmv_ referenced in function _f2c_chbmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _chpmv_ referenced in function _f2c_chpmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _cgeru_ referenced in function _f2c_cgeru f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _cgerc_ referenced in function _f2c_cgerc f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _cher_ referenced in function _f2c_cher f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _chpr_ referenced in function _f2c_chpr f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _cher2_ referenced in function _f2c_cher2 f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _chpr2_ referenced in function _f2c_chpr2 f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zhemv_ referenced in function _f2c_zhemv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zhbmv_ referenced in function _f2c_zhbmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zhpmv_ referenced in function _f2c_zhpmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zgeru_ referenced in function _f2c_zgeru f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zgerc_ referenced in function _f2c_zgerc f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zher_ referenced in function _f2c_zher f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zhpr_ referenced in function _f2c_zhpr f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zher2_ referenced in function _f2c_zher2 f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zhpr2_ referenced in function _f2c_zhpr2 f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _sgemm_ referenced in function _f2c_sgemm f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ssymm_ referenced in function _f2c_ssymm f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ssyrk_ referenced in function _f2c_ssyrk f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ssyr2k_ referenced in function _f2c_ssyr2k f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _strmm_ referenced in function _f2c_strmm f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _strsm_ referenced in function _f2c_strsm f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dgemm_ referenced in function _f2c_dgemm f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dsymm_ referenced in function _f2c_dsymm f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dsyrk_ referenced in function _f2c_dsyrk f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dsyr2k_ referenced in function _f2c_dsyr2k f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dtrmm_ referenced in function _f2c_dtrmm f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dtrsm_ referenced in function _f2c_dtrsm f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _cgemm_ referenced in function _f2c_cgemm f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _csymm_ referenced in function _f2c_csymm f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _csyrk_ referenced in function _f2c_csyrk f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _csyr2k_ referenced in function _f2c_csyr2k f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ctrmm_ referenced in function _f2c_ctrmm f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ctrsm_ referenced in function _f2c_ctrsm f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zgemm_ referenced in function _f2c_zgemm f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zsymm_ referenced in function _f2c_zsymm f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zsyrk_ referenced in function _f2c_zsyrk f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zsyr2k_ referenced in function _f2c_zsyr2k f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ztrmm_ referenced in function _f2c_ztrmm f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ztrsm_ referenced in function _f2c_ztrsm f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _chemm_ referenced in function _f2c_chemm f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _cherk_ referenced in function _f2c_cherk f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _cher2k_ referenced in function _f2c_cher2k f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zhemm_ referenced in function _f2c_zhemm f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zherk_ referenced in function _f2c_zherk f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zher2k_ referenced in function _f2c_zher2k C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.exe : fatal error LNK1120: 136 unresolved externals Possible ERROR while running linker: output: f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _sdot_ referenced in function _f2c_sdot f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ddot_ referenced in function _f2c_ddot f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _cdotu_ referenced in function _f2c_cdotu f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _cdotc_ referenced in function _f2c_cdotc f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zdotu_ referenced in function _f2c_zdotu f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zdotc_ referenced in function _f2c_zdotc f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _snrm2_ referenced in function _f2c_snrm2 f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _sasum_ referenced in function _f2c_sasum f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dnrm2_ referenced in function _f2c_dnrm2 f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dasum_ referenced in function _f2c_dasum f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _scnrm2_ referenced in function _f2c_scnrm2 f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _scasum_ referenced in function _f2c_scasum f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dznrm2_ referenced in function _f2c_dznrm2 f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dzasum_ referenced in function _f2c_dzasum f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _isamax_ referenced in function _f2c_isamax f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _idamax_ referenced in function _f2c_idamax f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _icamax_ referenced in function _f2c_icamax f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _izamax_ referenced in function _f2c_izamax f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _sswap_ referenced in function _f2c_sswap f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _scopy_ referenced in function _f2c_scopy f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _saxpy_ referenced in function _f2c_saxpy f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dswap_ referenced in function _f2c_dswap f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dcopy_ referenced in function _f2c_dcopy f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _daxpy_ referenced in function _f2c_daxpy f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _cswap_ referenced in function _f2c_cswap f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ccopy_ referenced in function _f2c_ccopy f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _caxpy_ referenced in function _f2c_caxpy f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zswap_ referenced in function _f2c_zswap f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zcopy_ referenced in function _f2c_zcopy f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zaxpy_ referenced in function _f2c_zaxpy f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _srotg_ referenced in function _f2c_srotg f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _srot_ referenced in function _f2c_srot f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _drotg_ referenced in function _f2c_drotg f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _drot_ referenced in function _f2c_drot f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _sscal_ referenced in function _f2c_sscal f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dscal_ referenced in function _f2c_dscal f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _cscal_ referenced in function _f2c_cscal f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zscal_ referenced in function _f2c_zscal f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _csscal_ referenced in function _f2c_csscal f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zdscal_ referenced in function _f2c_zdscal f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _sgemv_ referenced in function _f2c_sgemv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _sgbmv_ referenced in function _f2c_sgbmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _strmv_ referenced in function _f2c_strmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _stbmv_ referenced in function _f2c_stbmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _stpmv_ referenced in function _f2c_stpmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _strsv_ referenced in function _f2c_strsv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _stbsv_ referenced in function _f2c_stbsv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _stpsv_ referenced in function _f2c_stpsv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dgemv_ referenced in function _f2c_dgemv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dgbmv_ referenced in function _f2c_dgbmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dtrmv_ referenced in function _f2c_dtrmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dtbmv_ referenced in function _f2c_dtbmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dtpmv_ referenced in function _f2c_dtpmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dtrsv_ referenced in function _f2c_dtrsv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dtbsv_ referenced in function _f2c_dtbsv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dtpsv_ referenced in function _f2c_dtpsv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _cgemv_ referenced in function _f2c_cgemv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _cgbmv_ referenced in function _f2c_cgbmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ctrmv_ referenced in function _f2c_ctrmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ctbmv_ referenced in function _f2c_ctbmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ctpmv_ referenced in function _f2c_ctpmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ctrsv_ referenced in function _f2c_ctrsv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ctbsv_ referenced in function _f2c_ctbsv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ctpsv_ referenced in function _f2c_ctpsv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zgemv_ referenced in function _f2c_zgemv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zgbmv_ referenced in function _f2c_zgbmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ztrmv_ referenced in function _f2c_ztrmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ztbmv_ referenced in function _f2c_ztbmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ztpmv_ referenced in function _f2c_ztpmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ztrsv_ referenced in function _f2c_ztrsv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ztbsv_ referenced in function _f2c_ztbsv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ztpsv_ referenced in function _f2c_ztpsv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ssymv_ referenced in function _f2c_ssymv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ssbmv_ referenced in function _f2c_ssbmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _sspmv_ referenced in function _f2c_sspmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _sger_ referenced in function _f2c_sger f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ssyr_ referenced in function _f2c_ssyr f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _sspr_ referenced in function _f2c_sspr f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ssyr2_ referenced in function _f2c_ssyr2 f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _sspr2_ referenced in function _f2c_sspr2 f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dsymv_ referenced in function _f2c_dsymv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dsbmv_ referenced in function _f2c_dsbmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dspmv_ referenced in function _f2c_dspmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dger_ referenced in function _f2c_dger f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dsyr_ referenced in function _f2c_dsyr f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dspr_ referenced in function _f2c_dspr f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dsyr2_ referenced in function _f2c_dsyr2 f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dspr2_ referenced in function _f2c_dspr2 f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _chemv_ referenced in function _f2c_chemv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _chbmv_ referenced in function _f2c_chbmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _chpmv_ referenced in function _f2c_chpmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _cgeru_ referenced in function _f2c_cgeru f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _cgerc_ referenced in function _f2c_cgerc f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _cher_ referenced in function _f2c_cher f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _chpr_ referenced in function _f2c_chpr f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _cher2_ referenced in function _f2c_cher2 f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _chpr2_ referenced in function _f2c_chpr2 f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zhemv_ referenced in function _f2c_zhemv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zhbmv_ referenced in function _f2c_zhbmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zhpmv_ referenced in function _f2c_zhpmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zgeru_ referenced in function _f2c_zgeru f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zgerc_ referenced in function _f2c_zgerc f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zher_ referenced in function _f2c_zher f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zhpr_ referenced in function _f2c_zhpr f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zher2_ referenced in function _f2c_zher2 f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zhpr2_ referenced in function _f2c_zhpr2 f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _sgemm_ referenced in function _f2c_sgemm f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ssymm_ referenced in function _f2c_ssymm f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ssyrk_ referenced in function _f2c_ssyrk f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ssyr2k_ referenced in function _f2c_ssyr2k f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _strmm_ referenced in function _f2c_strmm f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _strsm_ referenced in function _f2c_strsm f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dgemm_ referenced in function _f2c_dgemm f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dsymm_ referenced in function _f2c_dsymm f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dsyrk_ referenced in function _f2c_dsyrk f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dsyr2k_ referenced in function _f2c_dsyr2k f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dtrmm_ referenced in function _f2c_dtrmm f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dtrsm_ referenced in function _f2c_dtrsm f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _cgemm_ referenced in function _f2c_cgemm f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _csymm_ referenced in function _f2c_csymm f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _csyrk_ referenced in function _f2c_csyrk f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _csyr2k_ referenced in function _f2c_csyr2k f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ctrmm_ referenced in function _f2c_ctrmm f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ctrsm_ referenced in function _f2c_ctrsm f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zgemm_ referenced in function _f2c_zgemm f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zsymm_ referenced in function _f2c_zsymm f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zsyrk_ referenced in function _f2c_zsyrk f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zsyr2k_ referenced in function _f2c_zsyr2k f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ztrmm_ referenced in function _f2c_ztrmm f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ztrsm_ referenced in function _f2c_ztrsm f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _chemm_ referenced in function _f2c_chemm f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _cherk_ referenced in function _f2c_cherk f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _cher2k_ referenced in function _f2c_cher2k f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zhemm_ referenced in function _f2c_zhemm f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zherk_ referenced in function _f2c_zherk f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zher2k_ referenced in function _f2c_zher2k C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.exe : fatal error LNK1120: 136 unresolved externals ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Users/fraphel/Downloads/blaslapack/new/lib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/new/lib/clapack.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dgetrs_(); int main() { dgetrs_() ; return 0; } Popping language C Checking for function dgeev_ in library ['/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/lib/BLAS.lib', '/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/lib/clapack.lib'] [] Pushing language C sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.packages.pthread -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.packages.pthread -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dgeev_(); int main() { dgeev_() ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Users/fraphel/Downloads/blaslapack/new/lib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/new/lib/clapack.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Users/fraphel/Downloads/blaslapack/new/lib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/new/lib/clapack.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _sdot_ referenced in function _f2c_sdot f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ddot_ referenced in function _f2c_ddot f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _cdotu_ referenced in function _f2c_cdotu f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _cdotc_ referenced in function _f2c_cdotc f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zdotu_ referenced in function _f2c_zdotu f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zdotc_ referenced in function _f2c_zdotc f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _snrm2_ referenced in function _f2c_snrm2 f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _sasum_ referenced in function _f2c_sasum f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dnrm2_ referenced in function _f2c_dnrm2 f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dasum_ referenced in function _f2c_dasum f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _scnrm2_ referenced in function _f2c_scnrm2 f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _scasum_ referenced in function _f2c_scasum f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dznrm2_ referenced in function _f2c_dznrm2 f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dzasum_ referenced in function _f2c_dzasum f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _isamax_ referenced in function _f2c_isamax f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _idamax_ referenced in function _f2c_idamax f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _icamax_ referenced in function _f2c_icamax f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _izamax_ referenced in function _f2c_izamax f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _sswap_ referenced in function _f2c_sswap f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _scopy_ referenced in function _f2c_scopy f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _saxpy_ referenced in function _f2c_saxpy f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dswap_ referenced in function _f2c_dswap f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dcopy_ referenced in function _f2c_dcopy f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _daxpy_ referenced in function _f2c_daxpy f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _cswap_ referenced in function _f2c_cswap f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ccopy_ referenced in function _f2c_ccopy f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _caxpy_ referenced in function _f2c_caxpy f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zswap_ referenced in function _f2c_zswap f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zcopy_ referenced in function _f2c_zcopy f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zaxpy_ referenced in function _f2c_zaxpy f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _srotg_ referenced in function _f2c_srotg f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _srot_ referenced in function _f2c_srot f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _drotg_ referenced in function _f2c_drotg f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _drot_ referenced in function _f2c_drot f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _sscal_ referenced in function _f2c_sscal f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dscal_ referenced in function _f2c_dscal f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _cscal_ referenced in function _f2c_cscal f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zscal_ referenced in function _f2c_zscal f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _csscal_ referenced in function _f2c_csscal f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zdscal_ referenced in function _f2c_zdscal f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _sgemv_ referenced in function _f2c_sgemv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _sgbmv_ referenced in function _f2c_sgbmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _strmv_ referenced in function _f2c_strmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _stbmv_ referenced in function _f2c_stbmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _stpmv_ referenced in function _f2c_stpmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _strsv_ referenced in function _f2c_strsv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _stbsv_ referenced in function _f2c_stbsv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _stpsv_ referenced in function _f2c_stpsv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dgemv_ referenced in function _f2c_dgemv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dgbmv_ referenced in function _f2c_dgbmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dtrmv_ referenced in function _f2c_dtrmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dtbmv_ referenced in function _f2c_dtbmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dtpmv_ referenced in function _f2c_dtpmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dtrsv_ referenced in function _f2c_dtrsv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dtbsv_ referenced in function _f2c_dtbsv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dtpsv_ referenced in function _f2c_dtpsv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _cgemv_ referenced in function _f2c_cgemv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _cgbmv_ referenced in function _f2c_cgbmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ctrmv_ referenced in function _f2c_ctrmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ctbmv_ referenced in function _f2c_ctbmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ctpmv_ referenced in function _f2c_ctpmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ctrsv_ referenced in function _f2c_ctrsv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ctbsv_ referenced in function _f2c_ctbsv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ctpsv_ referenced in function _f2c_ctpsv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zgemv_ referenced in function _f2c_zgemv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zgbmv_ referenced in function _f2c_zgbmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ztrmv_ referenced in function _f2c_ztrmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ztbmv_ referenced in function _f2c_ztbmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ztpmv_ referenced in function _f2c_ztpmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ztrsv_ referenced in function _f2c_ztrsv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ztbsv_ referenced in function _f2c_ztbsv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ztpsv_ referenced in function _f2c_ztpsv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ssymv_ referenced in function _f2c_ssymv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ssbmv_ referenced in function _f2c_ssbmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _sspmv_ referenced in function _f2c_sspmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _sger_ referenced in function _f2c_sger f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ssyr_ referenced in function _f2c_ssyr f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _sspr_ referenced in function _f2c_sspr f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ssyr2_ referenced in function _f2c_ssyr2 f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _sspr2_ referenced in function _f2c_sspr2 f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dsymv_ referenced in function _f2c_dsymv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dsbmv_ referenced in function _f2c_dsbmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dspmv_ referenced in function _f2c_dspmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dger_ referenced in function _f2c_dger f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dsyr_ referenced in function _f2c_dsyr f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dspr_ referenced in function _f2c_dspr f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dsyr2_ referenced in function _f2c_dsyr2 f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dspr2_ referenced in function _f2c_dspr2 f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _chemv_ referenced in function _f2c_chemv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _chbmv_ referenced in function _f2c_chbmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _chpmv_ referenced in function _f2c_chpmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _cgeru_ referenced in function _f2c_cgeru f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _cgerc_ referenced in function _f2c_cgerc f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _cher_ referenced in function _f2c_cher f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _chpr_ referenced in function _f2c_chpr f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _cher2_ referenced in function _f2c_cher2 f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _chpr2_ referenced in function _f2c_chpr2 f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zhemv_ referenced in function _f2c_zhemv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zhbmv_ referenced in function _f2c_zhbmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zhpmv_ referenced in function _f2c_zhpmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zgeru_ referenced in function _f2c_zgeru f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zgerc_ referenced in function _f2c_zgerc f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zher_ referenced in function _f2c_zher f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zhpr_ referenced in function _f2c_zhpr f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zher2_ referenced in function _f2c_zher2 f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zhpr2_ referenced in function _f2c_zhpr2 f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _sgemm_ referenced in function _f2c_sgemm f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ssymm_ referenced in function _f2c_ssymm f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ssyrk_ referenced in function _f2c_ssyrk f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ssyr2k_ referenced in function _f2c_ssyr2k f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _strmm_ referenced in function _f2c_strmm f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _strsm_ referenced in function _f2c_strsm f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dgemm_ referenced in function _f2c_dgemm f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dsymm_ referenced in function _f2c_dsymm f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dsyrk_ referenced in function _f2c_dsyrk f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dsyr2k_ referenced in function _f2c_dsyr2k f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dtrmm_ referenced in function _f2c_dtrmm f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dtrsm_ referenced in function _f2c_dtrsm f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _cgemm_ referenced in function _f2c_cgemm f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _csymm_ referenced in function _f2c_csymm f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _csyrk_ referenced in function _f2c_csyrk f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _csyr2k_ referenced in function _f2c_csyr2k f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ctrmm_ referenced in function _f2c_ctrmm f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ctrsm_ referenced in function _f2c_ctrsm f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zgemm_ referenced in function _f2c_zgemm f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zsymm_ referenced in function _f2c_zsymm f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zsyrk_ referenced in function _f2c_zsyrk f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zsyr2k_ referenced in function _f2c_zsyr2k f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ztrmm_ referenced in function _f2c_ztrmm f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ztrsm_ referenced in function _f2c_ztrsm f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _chemm_ referenced in function _f2c_chemm f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _cherk_ referenced in function _f2c_cherk f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _cher2k_ referenced in function _f2c_cher2k f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zhemm_ referenced in function _f2c_zhemm f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zherk_ referenced in function _f2c_zherk f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zher2k_ referenced in function _f2c_zher2k C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.exe : fatal error LNK1120: 136 unresolved externals Possible ERROR while running linker: output: f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _sdot_ referenced in function _f2c_sdot f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ddot_ referenced in function _f2c_ddot f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _cdotu_ referenced in function _f2c_cdotu f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _cdotc_ referenced in function _f2c_cdotc f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zdotu_ referenced in function _f2c_zdotu f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zdotc_ referenced in function _f2c_zdotc f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _snrm2_ referenced in function _f2c_snrm2 f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _sasum_ referenced in function _f2c_sasum f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dnrm2_ referenced in function _f2c_dnrm2 f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dasum_ referenced in function _f2c_dasum f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _scnrm2_ referenced in function _f2c_scnrm2 f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _scasum_ referenced in function _f2c_scasum f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dznrm2_ referenced in function _f2c_dznrm2 f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dzasum_ referenced in function _f2c_dzasum f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _isamax_ referenced in function _f2c_isamax f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _idamax_ referenced in function _f2c_idamax f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _icamax_ referenced in function _f2c_icamax f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _izamax_ referenced in function _f2c_izamax f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _sswap_ referenced in function _f2c_sswap f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _scopy_ referenced in function _f2c_scopy f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _saxpy_ referenced in function _f2c_saxpy f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dswap_ referenced in function _f2c_dswap f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dcopy_ referenced in function _f2c_dcopy f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _daxpy_ referenced in function _f2c_daxpy f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _cswap_ referenced in function _f2c_cswap f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ccopy_ referenced in function _f2c_ccopy f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _caxpy_ referenced in function _f2c_caxpy f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zswap_ referenced in function _f2c_zswap f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zcopy_ referenced in function _f2c_zcopy f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zaxpy_ referenced in function _f2c_zaxpy f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _srotg_ referenced in function _f2c_srotg f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _srot_ referenced in function _f2c_srot f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _drotg_ referenced in function _f2c_drotg f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _drot_ referenced in function _f2c_drot f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _sscal_ referenced in function _f2c_sscal f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dscal_ referenced in function _f2c_dscal f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _cscal_ referenced in function _f2c_cscal f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zscal_ referenced in function _f2c_zscal f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _csscal_ referenced in function _f2c_csscal f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zdscal_ referenced in function _f2c_zdscal f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _sgemv_ referenced in function _f2c_sgemv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _sgbmv_ referenced in function _f2c_sgbmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _strmv_ referenced in function _f2c_strmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _stbmv_ referenced in function _f2c_stbmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _stpmv_ referenced in function _f2c_stpmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _strsv_ referenced in function _f2c_strsv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _stbsv_ referenced in function _f2c_stbsv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _stpsv_ referenced in function _f2c_stpsv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dgemv_ referenced in function _f2c_dgemv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dgbmv_ referenced in function _f2c_dgbmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dtrmv_ referenced in function _f2c_dtrmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dtbmv_ referenced in function _f2c_dtbmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dtpmv_ referenced in function _f2c_dtpmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dtrsv_ referenced in function _f2c_dtrsv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dtbsv_ referenced in function _f2c_dtbsv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dtpsv_ referenced in function _f2c_dtpsv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _cgemv_ referenced in function _f2c_cgemv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _cgbmv_ referenced in function _f2c_cgbmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ctrmv_ referenced in function _f2c_ctrmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ctbmv_ referenced in function _f2c_ctbmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ctpmv_ referenced in function _f2c_ctpmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ctrsv_ referenced in function _f2c_ctrsv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ctbsv_ referenced in function _f2c_ctbsv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ctpsv_ referenced in function _f2c_ctpsv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zgemv_ referenced in function _f2c_zgemv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zgbmv_ referenced in function _f2c_zgbmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ztrmv_ referenced in function _f2c_ztrmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ztbmv_ referenced in function _f2c_ztbmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ztpmv_ referenced in function _f2c_ztpmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ztrsv_ referenced in function _f2c_ztrsv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ztbsv_ referenced in function _f2c_ztbsv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ztpsv_ referenced in function _f2c_ztpsv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ssymv_ referenced in function _f2c_ssymv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ssbmv_ referenced in function _f2c_ssbmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _sspmv_ referenced in function _f2c_sspmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _sger_ referenced in function _f2c_sger f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ssyr_ referenced in function _f2c_ssyr f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _sspr_ referenced in function _f2c_sspr f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ssyr2_ referenced in function _f2c_ssyr2 f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _sspr2_ referenced in function _f2c_sspr2 f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dsymv_ referenced in function _f2c_dsymv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dsbmv_ referenced in function _f2c_dsbmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dspmv_ referenced in function _f2c_dspmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dger_ referenced in function _f2c_dger f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dsyr_ referenced in function _f2c_dsyr f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dspr_ referenced in function _f2c_dspr f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dsyr2_ referenced in function _f2c_dsyr2 f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dspr2_ referenced in function _f2c_dspr2 f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _chemv_ referenced in function _f2c_chemv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _chbmv_ referenced in function _f2c_chbmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _chpmv_ referenced in function _f2c_chpmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _cgeru_ referenced in function _f2c_cgeru f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _cgerc_ referenced in function _f2c_cgerc f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _cher_ referenced in function _f2c_cher f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _chpr_ referenced in function _f2c_chpr f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _cher2_ referenced in function _f2c_cher2 f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _chpr2_ referenced in function _f2c_chpr2 f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zhemv_ referenced in function _f2c_zhemv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zhbmv_ referenced in function _f2c_zhbmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zhpmv_ referenced in function _f2c_zhpmv f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zgeru_ referenced in function _f2c_zgeru f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zgerc_ referenced in function _f2c_zgerc f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zher_ referenced in function _f2c_zher f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zhpr_ referenced in function _f2c_zhpr f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zher2_ referenced in function _f2c_zher2 f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zhpr2_ referenced in function _f2c_zhpr2 f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _sgemm_ referenced in function _f2c_sgemm f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ssymm_ referenced in function _f2c_ssymm f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ssyrk_ referenced in function _f2c_ssyrk f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ssyr2k_ referenced in function _f2c_ssyr2k f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _strmm_ referenced in function _f2c_strmm f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _strsm_ referenced in function _f2c_strsm f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dgemm_ referenced in function _f2c_dgemm f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dsymm_ referenced in function _f2c_dsymm f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dsyrk_ referenced in function _f2c_dsyrk f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dsyr2k_ referenced in function _f2c_dsyr2k f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dtrmm_ referenced in function _f2c_dtrmm f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _dtrsm_ referenced in function _f2c_dtrsm f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _cgemm_ referenced in function _f2c_cgemm f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _csymm_ referenced in function _f2c_csymm f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _csyrk_ referenced in function _f2c_csyrk f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _csyr2k_ referenced in function _f2c_csyr2k f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ctrmm_ referenced in function _f2c_ctrmm f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ctrsm_ referenced in function _f2c_ctrsm f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zgemm_ referenced in function _f2c_zgemm f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zsymm_ referenced in function _f2c_zsymm f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zsyrk_ referenced in function _f2c_zsyrk f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zsyr2k_ referenced in function _f2c_zsyr2k f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ztrmm_ referenced in function _f2c_ztrmm f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _ztrsm_ referenced in function _f2c_ztrsm f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _chemm_ referenced in function _f2c_chemm f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _cherk_ referenced in function _f2c_cherk f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _cher2k_ referenced in function _f2c_cher2k f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zhemm_ referenced in function _f2c_zhemm f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zherk_ referenced in function _f2c_zherk f77blaswrap.lib(fblaswr.obj) : error LNK2019: unresolved external symbol _zher2k_ referenced in function _f2c_zher2k C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.exe : fatal error LNK1120: 136 unresolved externals ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Users/fraphel/Downloads/blaslapack/new/lib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/new/lib/clapack.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dgeev_(); int main() { dgeev_() ; return 0; } Popping language C Checking for function df2cblaslapack311_id in library ['/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/lib/BLAS.lib', '/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/lib/clapack.lib'] [] Pushing language C sh: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.packages.pthread -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c Executing: win32fe cl -c -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.compilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.setCompilers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.headers -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.cacheDetails -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.missing -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.functions -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.utilities.scalarTypes -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.types -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.packages.MPI -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/PETSc.packages.pthread -I/cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.c sh: conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char df2cblaslapack311_id(); int main() { df2cblaslapack311_id() ; return 0; } Pushing language C Popping language C sh: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Users/fraphel/Downloads/blaslapack/new/lib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/new/lib/clapack.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Executing: win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Users/fraphel/Downloads/blaslapack/new/lib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/new/lib/clapack.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib sh: conftest.obj : error LNK2019: unresolved external symbol _df2cblaslapack311_id referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.exe : fatal error LNK1120: 1 unresolved externals Possible ERROR while running linker: output: conftest.obj : error LNK2019: unresolved external symbol _df2cblaslapack311_id referenced in function _main C:\Users\fraphel\AppData\Local\Temp\petsc-FwWJe2\config.libraries\conftest.exe : fatal error LNK1120: 1 unresolved externals ret = 512 Pushing language C Popping language C in win32fe cl -o /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.exe -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/include -I/cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ SDKs/Windows/v5.0/include -I/cygdrive/c/Program\ Files\ \(x86\)/MPICH2/include -I/cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/include -I/cygdrive/c/cygwin/usr/include -I/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/include -I/cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib -I/cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/include -Z7 /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/config.libraries/conftest.o /cygdrive/c/Users/fraphel/Downloads/blaslapack/new/lib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/new/lib/clapack.lib Ws2_32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcmt.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/oldnames.lib /cygdrive/c/Program\ Files/Microsoft\ SDKs/Windows/v6.0A/Lib/Kernel32.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/libcpmt.lib /cygdrive/c/Program\ Files\ \(x86\)/MPICH2/lib/libmpi.lib /cygdrive/c/Users/fraphel/Downloads/pthreads/pthreads/lib/pthread.lib /cygdrive/c/Program\ Files\ \(x86\)/Microsoft\ Visual\ Studio\ 9.0/VC/lib/vcomp.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/libf2c.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/f77blaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/cblaswrap.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/tmglib.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/BLAS.lib /cygdrive/c/Users/fraphel/Downloads/blaslapack/lib/newlib/clapack.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/metis/lib/libmetis.lib /cygdrive/c/Users/fraphel/Downloads/parmetis/parmetis/lib/libparmetis.lib Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char df2cblaslapack311_id(); int main() { df2cblaslapack311_id() ; return 0; } Popping language C **** Configure header /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/confdefs.h **** #if !defined(INCLUDED_UNKNOWN) #define INCLUDED_UNKNOWN #ifndef IS_COLORING_MAX #define IS_COLORING_MAX 65535 #endif #ifndef STDC_HEADERS #define STDC_HEADERS 1 #endif #ifndef MPIU_COLORING_VALUE #define MPIU_COLORING_VALUE MPI_UNSIGNED_SHORT #endif #ifndef _USE_MATH_DEFINES #define _USE_MATH_DEFINES 1 #endif #ifndef PETSC_HAVE_MALLOC_H #define PETSC_HAVE_MALLOC_H 1 #endif #ifndef PETSC_HAVE_IO_H #define PETSC_HAVE_IO_H 1 #endif #ifndef PETSC_HAVE_TIME_H #define PETSC_HAVE_TIME_H 1 #endif #ifndef PETSC_HAVE_MATH_H #define PETSC_HAVE_MATH_H 1 #endif #ifndef PETSC_HAVE_STRING_H #define PETSC_HAVE_STRING_H 1 #endif #ifndef PETSC_HAVE_FCNTL_H #define PETSC_HAVE_FCNTL_H 1 #endif #ifndef PETSC_HAVE_DIRECT_H #define PETSC_HAVE_DIRECT_H 1 #endif #ifndef PETSC_HAVE_WINDOWSX_H #define PETSC_HAVE_WINDOWSX_H 1 #endif #ifndef PETSC_HAVE_SYS_TYPES_H #define PETSC_HAVE_SYS_TYPES_H 1 #endif #ifndef PETSC_HAVE_DOS_H #define PETSC_HAVE_DOS_H 1 #endif #ifndef PETSC_HAVE_FLOAT_H #define PETSC_HAVE_FLOAT_H 1 #endif #ifndef PETSC_HAVE_STDLIB_H #define PETSC_HAVE_STDLIB_H 1 #endif #ifndef PETSC_HAVE_SEARCH_H #define PETSC_HAVE_SEARCH_H 1 #endif #ifndef PETSC_HAVE_SETJMP_H #define PETSC_HAVE_SETJMP_H 1 #endif #ifndef PETSC_HAVE_WS2TCPIP_H #define PETSC_HAVE_WS2TCPIP_H 1 #endif #ifndef PETSC_HAVE_LIMITS_H #define PETSC_HAVE_LIMITS_H 1 #endif #ifndef PETSC_CXX_RESTRICT #define PETSC_CXX_RESTRICT __restrict #endif #ifndef PETSC_C_STATIC_INLINE #define PETSC_C_STATIC_INLINE static __inline #endif #ifndef PETSC_C_RESTRICT #define PETSC_C_RESTRICT __restrict #endif #ifndef PETSC_HAVE_CXX_NAMESPACE #define PETSC_HAVE_CXX_NAMESPACE 1 #endif #ifndef PETSC_CXX_STATIC_INLINE #define PETSC_CXX_STATIC_INLINE static inline #endif #ifndef PETSC_HAVE_LIBWS2_32 #define PETSC_HAVE_LIBWS2_32 1 #endif #ifndef PETSC_HAVE_LIBMETIS #define PETSC_HAVE_LIBMETIS 1 #endif #ifndef PETSC_HAVE_LIBPARMETIS #define PETSC_HAVE_LIBPARMETIS 1 #endif #ifndef PETSC_HAVE_LIBMPI #define PETSC_HAVE_LIBMPI 1 #endif #ifndef PETSC_ARCH #define PETSC_ARCH "windows_superludist" #endif #ifndef PETSC_DIR #define PETSC_DIR "/cygdrive/c/cygwin/packages/petsc-3.4.5" #endif #ifndef HAVE_GZIP #define HAVE_GZIP 1 #endif #ifndef PETSC_CLANGUAGE_C #define PETSC_CLANGUAGE_C 1 #endif #ifndef PETSC_USE_ERRORCHECKING #define PETSC_USE_ERRORCHECKING 1 #endif #ifndef PETSC_SIZEOF_MPI_COMM #define PETSC_SIZEOF_MPI_COMM 4 #endif #ifndef PETSC_BITS_PER_BYTE #define PETSC_BITS_PER_BYTE 8 #endif #ifndef PETSC_SIZEOF_MPI_FINT #define PETSC_SIZEOF_MPI_FINT 4 #endif #ifndef PETSC_SIZEOF_VOID_P #define PETSC_SIZEOF_VOID_P 4 #endif #ifndef PETSC_RETSIGTYPE #define PETSC_RETSIGTYPE void #endif #ifndef PETSC_HAVE___INT64 #define PETSC_HAVE___INT64 1 #endif #ifndef PETSC_HAVE_CXX_COMPLEX #define PETSC_HAVE_CXX_COMPLEX 1 #endif #ifndef PETSC_SIZEOF_LONG #define PETSC_SIZEOF_LONG 4 #endif #ifndef PETSC_SIZEOF_INT #define PETSC_SIZEOF_INT 4 #endif #ifndef PETSC_SIZEOF_SIZE_T #define PETSC_SIZEOF_SIZE_T 4 #endif #ifndef PETSC_uid_t #define PETSC_uid_t int #endif #ifndef PETSC_SIZEOF_CHAR #define PETSC_SIZEOF_CHAR 1 #endif #ifndef PETSC_SIZEOF_DOUBLE #define PETSC_SIZEOF_DOUBLE 8 #endif #ifndef PETSC_SIZEOF_FLOAT #define PETSC_SIZEOF_FLOAT 4 #endif #ifndef PETSC_gid_t #define PETSC_gid_t int #endif #ifndef PETSC_SIZEOF_LONG_LONG #define PETSC_SIZEOF_LONG_LONG 8 #endif #ifndef PETSC_SIZEOF_SHORT #define PETSC_SIZEOF_SHORT 2 #endif #ifndef PETSC_HAVE_ACCESS #define PETSC_HAVE_ACCESS 1 #endif #ifndef PETSC_HAVE_SIGNAL #define PETSC_HAVE_SIGNAL 1 #endif #ifndef PETSC_HAVE__LSEEK #define PETSC_HAVE__LSEEK 1 #endif #ifndef PETSC_HAVE_VFPRINTF #define PETSC_HAVE_VFPRINTF 1 #endif #ifndef PETSC_HAVE__GETCWD #define PETSC_HAVE__GETCWD 1 #endif #ifndef PETSC_HAVE_MEMMOVE #define PETSC_HAVE_MEMMOVE 1 #endif #ifndef PETSC_HAVE_RAND #define PETSC_HAVE_RAND 1 #endif #ifndef PETSC_HAVE__SLEEP #define PETSC_HAVE__SLEEP 1 #endif #ifndef PETSC_HAVE_TIME #define PETSC_HAVE_TIME 1 #endif #ifndef PETSC_HAVE_GETCWD #define PETSC_HAVE_GETCWD 1 #endif #ifndef PETSC_HAVE_LSEEK #define PETSC_HAVE_LSEEK 1 #endif #ifndef PETSC_HAVE__VSNPRINTF #define PETSC_HAVE__VSNPRINTF 1 #endif #ifndef PETSC_HAVE_VPRINTF #define PETSC_HAVE_VPRINTF 1 #endif #ifndef PETSC_HAVE_STRICMP #define PETSC_HAVE_STRICMP 1 #endif #ifndef PETSC_HAVE__SNPRINTF #define PETSC_HAVE__SNPRINTF 1 #endif #ifndef PETSC_SIGNAL_CAST #define PETSC_SIGNAL_CAST #endif #ifndef PETSC_HAVE__ACCESS #define PETSC_HAVE__ACCESS 1 #endif #ifndef PETSC_HAVE_CLOCK #define PETSC_HAVE_CLOCK 1 #endif #ifndef PETSC_HAVE_MPI_COMM_C2F #define PETSC_HAVE_MPI_COMM_C2F 1 #endif #ifndef PETSC_HAVE_MPI_INIT_THREAD #define PETSC_HAVE_MPI_INIT_THREAD 1 #endif #ifndef PETSC_HAVE_MPI_LONG_DOUBLE #define PETSC_HAVE_MPI_LONG_DOUBLE 1 #endif #ifndef PETSC_HAVE_MPI_COMM_F2C #define PETSC_HAVE_MPI_COMM_F2C 1 #endif #ifndef PETSC_HAVE_MPI_FINT #define PETSC_HAVE_MPI_FINT 1 #endif #ifndef PETSC_HAVE_MPI_COMM_SPAWN #define PETSC_HAVE_MPI_COMM_SPAWN 1 #endif #ifndef PETSC_HAVE_MPI_TYPE_GET_ENVELOPE #define PETSC_HAVE_MPI_TYPE_GET_ENVELOPE 1 #endif #ifndef PETSC_HAVE_MPI_FINALIZED #define PETSC_HAVE_MPI_FINALIZED 1 #endif #ifndef PETSC_HAVE_MPI_EXSCAN #define PETSC_HAVE_MPI_EXSCAN 1 #endif #ifndef PETSC_HAVE_MPI_TYPE_GET_EXTENT #define PETSC_HAVE_MPI_TYPE_GET_EXTENT 1 #endif #ifndef PETSC_HAVE_MPI_COMBINER_DUP #define PETSC_HAVE_MPI_COMBINER_DUP 1 #endif #ifndef PETSC_HAVE_MPI_WIN_CREATE #define PETSC_HAVE_MPI_WIN_CREATE 1 #endif #ifndef PETSC_HAVE_MPI_REPLACE #define PETSC_HAVE_MPI_REPLACE 1 #endif #ifndef PETSC_HAVE_MPI_TYPE_DUP #define PETSC_HAVE_MPI_TYPE_DUP 1 #endif #ifndef PETSC_HAVE_MPIIO #define PETSC_HAVE_MPIIO 1 #endif #ifndef PETSC_HAVE_MPI_C_DOUBLE_COMPLEX #define PETSC_HAVE_MPI_C_DOUBLE_COMPLEX 1 #endif #ifndef PETSC_HAVE_MPI_ALLTOALLW #define PETSC_HAVE_MPI_ALLTOALLW 1 #endif #ifndef PETSC_HAVE_MPI_IN_PLACE #define PETSC_HAVE_MPI_IN_PLACE 1 #endif #ifndef PETSC_LEVEL1_DCACHE_LINESIZE #define PETSC_LEVEL1_DCACHE_LINESIZE 32 #endif #ifndef PETSC_LEVEL1_DCACHE_SIZE #define PETSC_LEVEL1_DCACHE_SIZE 32768 #endif #ifndef PETSC_LEVEL1_DCACHE_ASSOC #define PETSC_LEVEL1_DCACHE_ASSOC 2 #endif #ifndef PETSC_USE_PROC_FOR_SIZE #define PETSC_USE_PROC_FOR_SIZE 1 #endif #ifndef PETSC_USE_INFO #define PETSC_USE_INFO 1 #endif #ifndef PETSC_Alignx #define PETSC_Alignx(a,b) #endif #ifndef PETSC_USE_BACKWARD_LOOP #define PETSC_USE_BACKWARD_LOOP 1 #endif #ifndef PETSC_USE_DEBUG #define PETSC_USE_DEBUG 1 #endif #ifndef PETSC_USE_LOG #define PETSC_USE_LOG 1 #endif #ifndef PETSC_IS_COLOR_VALUE_TYPE #define PETSC_IS_COLOR_VALUE_TYPE short #endif #ifndef PETSC_USE_CTABLE #define PETSC_USE_CTABLE 1 #endif #ifndef PETSC_USE_SCALAR_REAL #define PETSC_USE_SCALAR_REAL 1 #endif #ifndef PETSC_HAVE__ISNAN #define PETSC_HAVE__ISNAN 1 #endif #ifndef PETSC_HAVE__FINITE #define PETSC_HAVE__FINITE 1 #endif #ifndef PETSC_USE_REAL_DOUBLE #define PETSC_USE_REAL_DOUBLE 1 #endif #ifndef PETSC_MEMALIGN #define PETSC_MEMALIGN 16 #endif #ifndef PETSC_MISSING_SIGUSR2 #define PETSC_MISSING_SIGUSR2 1 #endif #ifndef PETSC_MISSING_SIGURG #define PETSC_MISSING_SIGURG 1 #endif #ifndef PETSC_MISSING_SIGPIPE #define PETSC_MISSING_SIGPIPE 1 #endif #ifndef PETSC_MISSING_SIGHUP #define PETSC_MISSING_SIGHUP 1 #endif #ifndef PETSC_MISSING_SIGSTOP #define PETSC_MISSING_SIGSTOP 1 #endif #ifndef PETSC_MISSING_SIGSYS #define PETSC_MISSING_SIGSYS 1 #endif #ifndef PETSC_MISSING_SIGCONT #define PETSC_MISSING_SIGCONT 1 #endif #ifndef PETSC_HAVE_WSAGETLASTERROR #define PETSC_HAVE_WSAGETLASTERROR 1 #endif #ifndef PETSC_HAVE_CLOSESOCKET #define PETSC_HAVE_CLOSESOCKET 1 #endif #ifndef PETSC_MISSING_SIGTSTP #define PETSC_MISSING_SIGTSTP 1 #endif #ifndef PETSC_MISSING_SIGCHLD #define PETSC_MISSING_SIGCHLD 1 #endif #ifndef PETSC_HAVE_SOCKET #define PETSC_HAVE_SOCKET 1 #endif #ifndef PETSC_MISSING_SIGUSR1 #define PETSC_MISSING_SIGUSR1 1 #endif #ifndef PETSC_MISSING_SIGTRAP #define PETSC_MISSING_SIGTRAP 1 #endif #ifndef PETSC_MISSING_SIGQUIT #define PETSC_MISSING_SIGQUIT 1 #endif #ifndef PETSC_MISSING_SIGBUS #define PETSC_MISSING_SIGBUS 1 #endif #ifndef PETSC_HAVE_WINSOCK2_H #define PETSC_HAVE_WINSOCK2_H 1 #endif #ifndef PETSC_MISSING_SIGALRM #define PETSC_MISSING_SIGALRM 1 #endif #ifndef PETSC_NEEDS_UTYPE_TYPEDEFS #define PETSC_NEEDS_UTYPE_TYPEDEFS 1 #endif #ifndef PETSC_MISSING_SIGKILL #define PETSC_MISSING_SIGKILL 1 #endif #ifndef PETSC_HAVE_SHARED_LIBRARIES #define PETSC_HAVE_SHARED_LIBRARIES 1 #endif #ifndef PETSC_HAVE_PTHREAD_BARRIER_T #define PETSC_HAVE_PTHREAD_BARRIER_T 1 #endif #endif **** C specific Configure header /cygdrive/c/Users/fraphel/AppData/Local/Temp/petsc-FwWJe2/conffix.h **** #if !defined(INCLUDED_UNKNOWN) #define INCLUDED_UNKNOWN typedef int int32_t; typedef int mode_t; typedef int pid_t; #if defined(__cplusplus) extern "C" { int getdomainname(char *, int); double drand48(); void srand48(long); } #else #endif #endif ******************************************************************************* UNABLE to CONFIGURE with GIVEN OPTIONS (see configure.log for details): ------------------------------------------------------------------------------- You set a value for --with-blas-lapack-lib=, but ['/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/lib/BLAS.lib', '/cygdrive/c/Users/fraphel/Downloads/blaslapack/new/lib/clapack.lib'] cannot be used ******************************************************************************* File "config/configure.py", line 287, in petsc_configure framework.configure(out = sys.stdout) File "/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/framework.py", line 933, in configure child.configure() File "/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/packages/BlasLapack.py", line 562, in configure self.executeTest(self.configureLibrary) File "/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/base.py", line 115, in executeTest ret = apply(test, args,kargs) File "/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/packages/BlasLapack.py", line 445, in configureLibrary for (name, blasLibrary, lapackLibrary, self.useCompatibilityLibs) in self.generateGuesses(): File "/cygdrive/c/cygwin/packages/petsc-3.4.5/config/BuildSystem/config/packages/BlasLapack.py", line 194, in generateGuesses raise RuntimeError('You set a value for --with-blas-lapack-lib=, but '+str(self.framework.argDB['with-blas-lapack-lib'])+' cannot be used\n')