<div dir="ltr"><div class="gmail_extra"><div class="gmail_quote">On Wed, Dec 17, 2014 at 9:30 AM, paul zhang <span dir="ltr"><<a href="mailto:paulhuaizhang@gmail.com" target="_blank">paulhuaizhang@gmail.com</a>></span> wrote:<blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left-width:1px;border-left-color:rgb(204,204,204);border-left-style:solid;padding-left:1ex"><div dir="ltr"><div></div><div style="font-size:small">Attached. </div></div></blockquote><div><br></div><div>You HDF5 installation is incomplete. It is missing</div><div><br></div><div> libhdf5_hl.a</div><div><br></div><div> Thanks,</div><div><br></div><div> Matt</div><div> </div><blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left-width:1px;border-left-color:rgb(204,204,204);border-left-style:solid;padding-left:1ex"><div dir="ltr"><div style="font-size:small">Thanks,</div><div style="font-size:small">Paul</div><div class="gmail_extra"><br clear="all"><div><div><div style="color:rgb(0,0,0)"><font size="1">Huaibao (Paul) Zhang<br><b><i>Gas Surface Interactions Lab</i></b><br></font></div>
<div style="color:rgb(0,0,0)"><font size="1">Department of Mechanical Engineering</font></div>
<div style="color:rgb(0,0,0)"><font size="1">University of Kentucky,</font></div>
<div style="color:rgb(0,0,0)"><font size="1">Lexington,</font></div>
<div style="margin:0px;font-family:Helvetica;font-style:normal;font-variant:normal;font-weight:normal;line-height:normal;font-stretch:normal"><font size="1">KY, 40506-0503<b><br>Office</b>: 216 Ralph G. Anderson Building<br><b>Web</b>:<a href="http://gsil.engineering.uky.edu" target="_blank"><span style="color:rgb(0,0,153)">gsil.engineering.uky.edu</span></a></font><span style="color:rgb(0,0,0)"><span style="color:rgb(0,0,153)"></span></span></div><div style="color:rgb(255,102,102)"><font size="1"><span style="text-indent:0px;letter-spacing:normal;font-variant:normal;font-style:normal;font-weight:normal;line-height:normal;border-collapse:separate;text-transform:none;white-space:normal;font-family:Helvetica;word-spacing:0px"><span style="text-indent:0px;letter-spacing:normal;font-variant:normal;font-style:normal;font-weight:normal;line-height:normal;border-collapse:separate;text-transform:none;white-space:normal;font-family:Helvetica;word-spacing:0px"><span style="text-indent:0px;letter-spacing:normal;font-variant:normal;font-style:normal;font-weight:normal;line-height:normal;border-collapse:separate;text-transform:none;white-space:normal;font-family:Helvetica;word-spacing:0px"><span style="text-indent:0px;letter-spacing:normal;font-variant:normal;font-style:normal;font-weight:normal;line-height:normal;border-collapse:separate;text-transform:none;white-space:normal;font-family:Helvetica;word-spacing:0px"><span style="text-indent:0px;letter-spacing:normal;font-variant:normal;font-style:normal;font-weight:normal;line-height:normal;border-collapse:separate;text-transform:none;white-space:normal;font-family:Helvetica;word-spacing:0px"><span style="font-family:Tahoma"><span style="font-family:Verdana"><font face="Helvetica"><span></span></font></span></span></span></span></span></span></span></font></div></div></div>
<br><div class="gmail_quote">On Wed, Dec 17, 2014 at 10:19 AM, Matthew Knepley <span dir="ltr"><<a href="mailto:knepley@gmail.com" target="_blank">knepley@gmail.com</a>></span> wrote:<blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left-width:1px;border-left-color:rgb(204,204,204);border-left-style:solid;padding-left:1ex"><div dir="ltr"><div class="gmail_extra"><div class="gmail_quote"><span>On Wed, Dec 17, 2014 at 8:58 AM, paul zhang <span dir="ltr"><<a href="mailto:paulhuaizhang@gmail.com" target="_blank">paulhuaizhang@gmail.com</a>></span> wrote:<blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left-width:1px;border-left-color:rgb(204,204,204);border-left-style:solid;padding-left:1ex"><div dir="ltr"><div style="font-size:small">Hi All,</div><div style="font-size:small"><br></div><div>I attempted to include hdf5 dir in my configuration, but failed. </div><div style="font-size:small"><br></div><div><div>--with-hdf5-dir=$HDF5PATH</div><div style="font-size:small"><br></div><div><span style="font-size:small">I tried </span>HDF5PATH=/share/cluster/SLES9/x86_64/apps/hdf5/1.8.3, but it shows</div></div></div></blockquote><div><br></div></span><div>When you get a failure like this, you have to send configure.log</div><div><br></div><div> Thanks,</div><div><br></div><div> Matt</div><span><div> </div><blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left-width:1px;border-left-color:rgb(204,204,204);border-left-style:solid;padding-left:1ex"><div dir="ltr"><div><div><div> UNABLE to CONFIGURE with GIVEN OPTIONS (see configure.log for details):</div><div>-------------------------------------------------------------------------------</div><div>--with-hdf5-dir=/share/cluster/SLES9/x86_64/apps/hdf5/1.8.3 did not work</div><div>*******************************************************************************</div></div><div style="font-size:small"><br></div><div style="font-size:small"><br></div></div><div><span style="font-size:small">As I run $</span>module show hdf5, I got </div><div><br></div><div><div><b>-------------------------------------------------------------------</b></div><div><b>/usr/share/Modules/modulefiles/hdf5/1.8.3/icc/default:</b></div><div><b><br></b></div><div><b>module-whatis<span style="white-space:pre-wrap"> </span> load HDF5 environment </b></div><div><b>prepend-path<span style="white-space:pre-wrap"> </span> PATH /share/cluster/SLES9/x86_64/apps/hdf5/1.8.3/icc/bin </b></div><div><b>append-path<span style="white-space:pre-wrap"> </span> LD_LIBRARY_PATH /share/cluster/SLES9/x86_64/apps/hdf5/1.8.3/icc/lib </b></div><div><b>prepend-path<span style="white-space:pre-wrap"> </span> MANPATH /share/cluster/SLES9/x86_64/apps/hdf5/1.8.3/icc/share/man </b></div><div><b>setenv<span style="white-space:pre-wrap"> </span> HDF_INCL /share/cluster/SLES9/x86_64/apps/hdf5/1.8.3/icc/include </b></div><div><b>-------------------------------------------------------------------</b></div><div style="font-size:small"><br></div></div><div style="font-size:small"><div>What is my HDF5PATH?</div><div><br></div><div><br>Thanks,<br>Paul</div></div><div style="font-size:small"><br></div><div style="font-size:small"><br></div><div><div><div style="color:rgb(0,0,0)"><font size="1">Huaibao (Paul) Zhang<br><b><i>Gas Surface Interactions Lab</i></b><br></font></div>
<div style="color:rgb(0,0,0)"><font size="1">Department of Mechanical Engineering</font></div>
<div style="color:rgb(0,0,0)"><font size="1">University of Kentucky,</font></div>
<div style="color:rgb(0,0,0)"><font size="1">Lexington,</font></div>
<div style="margin:0px;font-family:Helvetica;font-style:normal;font-variant:normal;font-weight:normal;line-height:normal"><font size="1">KY, 40506-0503<b><br>Office</b>: 216 Ralph G. Anderson Building<br><b>Web</b>:<a href="http://gsil.engineering.uky.edu" target="_blank"><span style="color:rgb(0,0,153)">gsil.engineering.uky.edu</span></a></font><span style="color:rgb(0,0,0)"><span style="color:rgb(0,0,153)"></span></span></div><div style="color:rgb(255,102,102)"><font size="1"><span style="text-indent:0px;letter-spacing:normal;font-variant:normal;font-style:normal;font-weight:normal;line-height:normal;border-collapse:separate;text-transform:none;white-space:normal;font-family:Helvetica;word-spacing:0px"><span style="text-indent:0px;letter-spacing:normal;font-variant:normal;font-style:normal;font-weight:normal;line-height:normal;border-collapse:separate;text-transform:none;white-space:normal;font-family:Helvetica;word-spacing:0px"><span style="text-indent:0px;letter-spacing:normal;font-variant:normal;font-style:normal;font-weight:normal;line-height:normal;border-collapse:separate;text-transform:none;white-space:normal;font-family:Helvetica;word-spacing:0px"><span style="text-indent:0px;letter-spacing:normal;font-variant:normal;font-style:normal;font-weight:normal;line-height:normal;border-collapse:separate;text-transform:none;white-space:normal;font-family:Helvetica;word-spacing:0px"><span style="text-indent:0px;letter-spacing:normal;font-variant:normal;font-style:normal;font-weight:normal;line-height:normal;border-collapse:separate;text-transform:none;white-space:normal;font-family:Helvetica;word-spacing:0px"><span style="font-family:Tahoma"><span style="font-family:Verdana"><font face="Helvetica"><span></span></font></span></span></span></span></span></span></span></font></div></div></div>
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</blockquote></span></div><span><font color="#888888"><br clear="all"><span class=""><font color="#888888"><div><br></div>-- <br><div>What most experimenters take for granted before they begin their experiments is infinitely more interesting than any results to which their experiments lead.<br>-- Norbert Wiener</div>
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</blockquote></div><br clear="all"><div><br></div>-- <br><div class="gmail_signature">What most experimenters take for granted before they begin their experiments is infinitely more interesting than any results to which their experiments lead.<br>-- Norbert Wiener</div>
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